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{Sulfur Monoxide is known to be a good shock tracer in molecular clouds and protostar environments, but its abundance is difficult to reproduce even using state-of-the-art astrochemical models. } {We investigate the properties of the observed SO emission in the protoplanetary disk of AB Auriga, a Herbig Ae star of 2.4 $\Msun$ located at 156 pc. The AB Aur system is unique because it exhibits a dust trap and at least one young putative planet orbiting at about 30 au from the central star.} {We reduced ALMA archival data (projects 2019.1.00579.S, 2021.1.00690.S and 2021.1.01216.S) and analyzed the three detected SO lines (SO $6_5-5_4$, $6_7-5_6$ and $5_6-4_5$). We also present C$^{17}$O and C$^{18}$O 2-1 data to complement the interpretation of the SO data.} {For the three SO lines, the maximum SO emission in the ring is not located in the dust trap. Moreover, the inner radius of the SO ring is significantly larger than the CO emission inner radius, $\sim 160$ au versus $\sim 90$ au. The SO emission traces gas located in part beyond the dust ring. This emission likely originates from shocks at the interface of the outer spirals, observed in CO and scattered light emission, and the molecular and dust ring. SO is also detected inside the cavity, at a radius $\sim 20-30$ au and with a rotation velocity compatible with the proto-planet P1. We speculate that this SO emission originates from accretion shocks onto the circumplanetary disk of the putative proto-planet P1.} {These observations confirm that SO is a good tracer of shocks in protoplanetary disks and could be a powerful, new tool to detect embedded (proto-)planets.} Conclusions. These observations confirm that SO is a good tracer of shocks in protoplanetary disks and could be a powerful, new tool to detect embedded (proto-)planets.

Generally, the small size of public medical imaging datasets coupled with stringent privacy concerns, hampers the advancement of data-hungry deep learning models in medical imaging. This study addresses these challenges for 3D cardiac MRI images in the short-axis view. We propose Latent Diffusion Models that generate synthetic images conditioned on medical attributes, while ensuring patient privacy through differentially private model training. To our knowledge, this is the first work to apply and quantify differential privacy in 3D medical image generation. We pre-train our models on public data and finetune them with differential privacy on the UK Biobank dataset. Our experiments reveal that pre-training significantly improves model performance, achieving a Fr\'echet Inception Distance (FID) of 26.77 at $\epsilon=10$, compared to 92.52 for models without pre-training. Additionally, we explore the trade-off between privacy constraints and image quality, investigating how tighter privacy budgets affect output controllability and may lead to degraded performance. Our results demonstrate that proper consideration during training with differential privacy can substantially improve the quality of synthetic cardiac MRI images, but there are still notable challenges in achieving consistent medical realism.

Resolved molecular line observations are essential for gaining insight into the physical and chemical structure of protoplanetary disks, particularly in cold, dense regions where planets form and acquire their chemical compositions. However, tracing these regions is challenging because most molecules freeze onto grain surfaces and are not observable in the gas phase. We investigated cold molecular chemistry in the triple stellar T Tauri disk GG Tau A, which harbours a massive gas and dust ring and an outer disk, using ALMA Band 7 observations. We present high angular resolution maps of N2H+ and DCO+ emission, with upper limits reported for H2D+, 13CS, and SO2. The radial intensity profile of N2H+ shows most emission near the ring outer edge, while DCO+ exhibits double peaks, one near the ring inner edge and the other in the outer disk. With complementary observations of lower-lying transitions, we constrained the molecular surface densities and rotation temperatures. We compared the derived quantities with model predictions across different cosmic ray ionization (CRI) rates, carbon-to-oxygen (C/O) ratios, and stellar UV fluxes. Cold molecular chemistry, affecting N2H+, DCO+, and H2D+ abundances, is most sensitive to CRI rates, while stellar UV flux and C/O ratios have minimal impact on these three ions. Our best model requires a low cosmic ray ionization rate of 1e-18 s-1. However, it fails to match the low temperatures derived from N2H+ and DCO+, 12 to 16 K, which are much lower than the CO freezing temperature., Comment: Accepted for publication in the Astrophysical Journal; 26 Pages (15 figures and 8 tables)

Interpretability is essential in medical imaging to ensure that clinicians can comprehend and trust artificial intelligence models. Several approaches have been recently considered to encode attributes in the latent space to enhance its interpretability. Notably, attribute regularization aims to encode a set of attributes along the dimensions of a latent representation. However, this approach is based on Variational AutoEncoder and suffers from blurry reconstruction. In this paper, we propose an Attributed-regularized Soft Introspective Variational Autoencoder that combines attribute regularization of the latent space within the framework of an adversarially trained variational autoencoder. We demonstrate on short-axis cardiac Magnetic Resonance images of the UK Biobank the ability of the proposed method to address blurry reconstruction issues of variational autoencoder methods while preserving the latent space interpretability., Comment: arXiv admin note: substantial text overlap with arXiv:2312.08915

Interpretability is essential in medical imaging to ensure that clinicians can comprehend and trust artificial intelligence models. In this paper, we propose a novel interpretable approach that combines attribute regularization of the latent space within the framework of an adversarially trained variational autoencoder. Comparative experiments on a cardiac MRI dataset demonstrate the ability of the proposed method to address blurry reconstruction issues of variational autoencoder methods and improve latent space interpretability. Additionally, our analysis of a downstream task reveals that the classification of cardiac disease using the regularized latent space heavily relies on attribute regularized dimensions, demonstrating great interpretability by connecting the used attributes for prediction with clinical observations.

The Segment Anything Model (SAM) has recently emerged as a significant breakthrough in foundation models, demonstrating remarkable zero-shot performance in object segmentation tasks. While SAM is designed for generalization, it exhibits limitations in handling specific medical imaging tasks that require fine-structure segmentation or precise boundaries. In this paper, we focus on the task of cardiac magnetic resonance imaging (cMRI) short-axis view segmentation using the SAM foundation model. We conduct a comprehensive investigation of the impact of different prompting strategies (including bounding boxes, positive points, negative points, and their combinations) on segmentation performance. We evaluate on two public datasets using the baseline model and models fine-tuned with varying amounts of annotated data, ranging from a limited number of volumes to a fully annotated dataset. Our findings indicate that prompting strategies significantly influence segmentation performance. Combining positive points with either bounding boxes or negative points shows substantial benefits, but little to no benefit when combined simultaneously. We further observe that fine-tuning SAM with a few annotated volumes improves segmentation performance when properly prompted. Specifically, fine-tuning with bounding boxes has a positive impact, while fine-tuning without bounding boxes leads to worse results compared to baseline.

Short axis cardiac MRI segmentation is a well-researched topic, with excellent results achieved by state-of-the-art models in a supervised setting. However, annotating MRI volumes is time-consuming and expensive. Many different approaches (e.g. transfer learning, data augmentation, few-shot learning, etc.) have emerged in an effort to use fewer annotated data and still achieve similar performance as a fully supervised model. Nevertheless, to the best of our knowledge, none of these works focus on which slices of MRI volumes are most important to annotate for yielding the best segmentation results. In this paper, we investigate the effects of training with sparse volumes, i.e. reducing the number of cases annotated, and sparse annotations, i.e. reducing the number of slices annotated per case. We evaluate the segmentation performance using the state-of-the-art nnU-Net model on two public datasets to identify which slices are the most important to annotate. We have shown that training on a significantly reduced dataset (48 annotated volumes) can give a Dice score greater than 0.85 and results comparable to using the full dataset (160 and 240 volumes for each dataset respectively). In general, training on more slice annotations provides more valuable information compared to training on more volumes. Further, annotating slices from the middle of volumes yields the most beneficial results in terms of segmentation performance, and the apical region the worst. When evaluating the trade-off between annotating volumes against slices, annotating as many slices as possible instead of annotating more volumes is a better strategy.

Deep generative models have emerged as influential instruments for data generation and manipulation. Enhancing the controllability of these models by selectively modifying data attributes has been a recent focus. Variational Autoencoders (VAEs) have shown promise in capturing hidden attributes but often produce blurry reconstructions. Controlling these attributes through different imaging domains is difficult in medical imaging. Recently, Soft Introspective VAE leverage the benefits of both VAEs and Generative Adversarial Networks (GANs), which have demonstrated impressive image synthesis capabilities, by incorporating an adversarial loss into VAE training. In this work, we propose the Attributed Soft Introspective VAE (Attri-SIVAE) by incorporating an attribute regularized loss, into the Soft-Intro VAE framework. We evaluate experimentally the proposed method on cardiac MRI data from different domains, such as various scanner vendors and acquisition centers. The proposed method achieves similar performance in terms of reconstruction and regularization compared to the state-of-the-art Attributed regularized VAE but additionally also succeeds in keeping the same regularization level when tested on a different dataset, unlike the compared method., Comment: Not accepted and outdated results

HD 169142 is part of the class of (pre-)transitional protoplanetary disks showing multiple carbon nanodust spectroscopic signatures (aromatic, aliphatic) dominating the infrared spectrum. Precise constraints on the spatial distribution and properties of carbonaceous dust particles are essential to understanding the physics of the disk. The HD 169142 disk is seen almost face-on and thus offers a unique opportunity to study the dust radial evolution. We investigate the spatial distribution and properties of the carriers of several dust aromatic emission features in the disk across a broad spatial range (10-200 AU). We analysed imaging and spectroscopic observations in the 8-12 microns range from VLT/VISIR, as well as adaptive optics spectroscopic observations in the 3-4 microns range from VLT/NACO. The data probes the spatial evolution of the 3.3, 8.6, and 11.3 microns aromatic bands. To constrain the radial distribution of carbonaceous nano-grains, the observations were compared to models using The Heterogeneous dust Evolution Model for Interstellar Solids (THEMIS), integrated into the POLARIS radiative transfer code by calculating the thermal and stochastic heating of sub-micrometer dust grains. Our data show predominant nano-particle emission at all radii (resolution of about 0.1", 12 AU at 3 microns and 0.3", 35 AU at 10 microns) in the HD 169142 disk. This unambiguously shows that carbonaceous nano-grains dominate radiatively the infrared spectrum in most of the disk, as suggested by previous studies. In order to account for both VISIR and NACO emission maps, we show the need for aromatic particles distributed within the disk from the outermost regions to a radius of 20 AU, corresponding to the outer limit of the inner cavity derived from previous observations. In the inner cavity, these aromatic particles might be present but their abundance would then be significantly decreased., Comment: 11 pages, 8 figures

The nature of the gas in CO-rich debris discs remains poorly understood, as it could either be a remnant from the earlier Class II phase or of secondary origin, driven by the destruction of icy planetesimals. The aim of this paper was to elucidate the origin of the gas content in the debris discs via various simple molecules that are often detected in the less-evolved Class II discs. We present millimetre molecular line observations of nine circumstellar discs around A-type stars: four CO-rich debris discs (HD 21997, HD 121617, HD 131488, HD 131835) and five old Herbig Ae protoplanetary discs (HD 139614, HD 141569, HD 142666, HD 145718, HD 100453). The sources were observed with the Atacama Large Millimeter/submillimeter Array (ALMA) in Bands 5 and 6 with 1-2'' resolution. The Herbig Ae discs are detected in the CO isotopologues, CN, HCN, HCO$^+$, C2H, and CS lines. In contrast, only CO isotopologues are detected in the debris discs, showing a similar amount of CO to that found in the Herbig Ae protoplanetary discs. Using chemical and radiative transfer modelling, we show that the abundances of molecules other than CO in debris discs are expected to be very low. We consider multiple sets of initial elemental abundances with various degrees of H2 depletion. We find that the HCO+ lines should be the second brightest after the CO lines and that their intensities strongly depend on the overall CO/H$_2$ ratio of the gas. However, even in the ISM-like scenario, the simulated HCO+ emission remains weak as required by our non-detections., Comment: 15 pages, 9 figures, 7 tables Accepted for publication in MNRAS

Molecular line surveys are among the main tools to probe the structure and physical conditions in protoplanetary disks (PPDs), the birthplace of planets. The large radial and vertical temperature as well as density gradients in these PPDs lead to a complex chemical composition, making chemistry an important step to understand the variety of planetary systems. We aimed to study the chemical content of the protoplanetary disk surrounding GG Tau A, a well-known triple T Tauri system. We used NOEMA with the new correlator PolyFix to observe rotational lines at 2.6 to 4 mm from a few dozen molecules. We analysed the data with a radiative transfer code to derive molecular densities and the abundance relative to $^{13}$CO, which we compare to those of the TMC1 cloud and LkCa15 disk. We report the first detection of CCS in PPDs. We also marginally detect OCS and find 16 other molecules in the GG Tauri outer disk. Ten of them had been found previously, while seven others ($^{13}$CN, N$_2$H$^+$, HNC, DNC, HC$_3$N, CCS, and C$^{34}$S) are new detections in this disk. The analysis confirms that sulphur chemistry is not yet properly understood. The D/H ratio, derived from DCO$^{+}$/HCO$^{+}$, DCN/HCN, and DNC/HNC ratios, points towards a low temperature chemistry. The detection of the rare species CCS confirms that GG Tau is a good laboratory to study the protoplanetary disk chemistry, thanks to its large disk size and mass., Comment: Accepted by Astronomy and Astrophysics

We obtained polarimetric differential imaging of a gas-rich debris disk around HD 141569A with SPHERE in the H-band to compare the scattering properties of the innermost ring at 44 au with former observations in total intensity with the same instrument. In polarimetric imaging, we observed that the intensity of the ring peaks in the south-east, mostly in the forward direction, whereas in total intensity imaging, the ring is detected only at the south. This noticeable characteristic suggests a non-uniform dust density in the ring. We implemented a density function varying azimuthally along the ring and generated synthetic images both in polarimetry and in total intensity, which are then compared to the actual data. We find that the dust density peaks in the south-west at an azimuthal angle of $220^{\circ} \sim 238^{\circ}$ with a rather broad width of $61^{\circ} \sim 127^{\circ}$. Although there are still uncertainties that remain in the determination of the anisotropic scattering factor, the implementation of an azimuthal density variation to fit the data proved to be robust. Upon elaborating on the origin of this dust density distribution, we conclude that it could be the result of a massive collision when we account for the effect of the high gas mass that is present in the system on the dynamics of grains. Using the outcome of this modelization, we further measured the polarized scattering phase function for the observed scattering angle between 33$^{\circ}$ and 147$^{\circ}$ as well as the spectral reflectance of the southern part of the ring between 0.98 $\mu$m and 2.1 $\mu$m. We tentatively derived the grain properties by comparing these quantities with MCFOST models and assuming Mie scattering. Our preliminary interpretation indicates a mixture of porous sub-micron sized astro-silicate and carbonaceous grains., Comment: 21 pages, 18 figures, Accepted for publication in Astronomy & Astrophysics journal

Grain surface chemistry is key to the composition of protoplanetary disks around young stars. The temperature of grains depends on their size. We evaluate the impact of this temperature dependence on the disk chemistry. We model a moderately massive disk with 16 different grain sizes. We use POLARIS to calculate the dust grain temperatures and the local UV flux. We model the chemistry using the 3-phase astrochemical code NAUTILUS. Photoprocesses are handled using frequency-dependent cross-sections, and a new method to account for self and mutual shielding. The multi-grain model outputs are compared to those of single-grain size models (0.1 $\mu$m), with two different assumptions for their equivalent temperature. We find that the Langmuir-Hinshelwood (LH) mechanism at equilibrium temperature is not efficient to form H$_2$ at 3-4 scale heights ($H$), and adopt a parametric fit to a stochastic method to model H$_2$ formation instead. We find the molecular layer composition (1-3 $H$) to depend on the amount of remaining H atoms. Differences in molecular surface densities between single and multi-grain models are mostly due to what occurs above 1.5 $H$. At 100 au, models with colder grains produce H$_2$O and CH$_4$ ices in the midplane, and warmer ones produce more CO$_2$ ices, both allowing efficient depletion of C and O as soon as CO sticks on grain surfaces. Complex organic molecules (COMs) production is enhanced by the presence of warmer grains in the multi-grain models. Using a single grain model mimicking grain growth and dust settling fails to reproduce the complexity of gas-grain chemistry. Chemical models with a single grain size are sensitive to the adopted grain temperature, and cannot account for all expected effects. A spatial spread of the snowlines is expected to result from the ranges in grain temperature. The amplitude of the effects will depend on the dust disk mass., Comment: 39 pages, 33 figures

We present a multi-wavelength analysis to reveal the nature of the enigmatic T Tauri triple star system. New optical and infrared measurements are coupled with archival X-ray, UV and mm datasets to show morphologies of disk material and outflow kinematics. A dark lane of obscuring material is seen in silhouette in several emission lines and in model-subtracted ALMA mm continuum dust residuals near the position of T Tau Sa+Sb, revealing the attenuating circumbinary ring around T Tau S. The flux variability of T Tau S is linked in part to the binary orbit; T Tau Sb brightens near orbital apastron as it emerges from behind circumbinary material. Outflow diagnostics confirm that T Tau N powers the blue-shifted western outflow, and the T Tau S binary drives the northwest-southeastern flow. Analysis of the southern outflow shows periodic arcs ejected from the T Tau system. Correlation of these arc locations and tangential kinematics with the orbit timing suggests that launch of the last four southern outflow ejections is contemporaneous with, and perhaps triggered by, the T Tau Sa+Sb binary periastron passage. We present a geometry of the T Tau triple that has the southern components foreground to T Tau N, obscured by a circumbinary ring, with mis-aligned disks and interacting outflows. Particularly, a wind from T Tauri Sa that is perpendicular to its circumstellar disk might interact with the circumbinary material, which may explain conflicting high contrast measurements of the system outflows in the literature. T Tauri is an important laboratory to understand early dynamical processes in young multiple systems. We discuss the historical and future characteristics of the system in this context., Comment: Accepted for publication in the Astrophysical Journal

Context. Planet formation is expected to take place in the first million years of a planetary system through various processes, which remain to be tested through observations. Aims. With the recent discovery, using ALMA, of two gaseous spiral arms inside the 120 au cavity and connected to dusty spirals, the famous protoplanetary disk around AB Aurigae presents a strong incentive for investigating the mechanisms that lead to giant planet formation. A candidate protoplanet located inside a spiral arm has already been claimed in an earlier study based on the same ALMA data. Methods. We used SPHERE at the Very Large Telescope (VLT) to perform near-infrared (IR) high-contrast imaging of AB Aur in polarized and unpolarized light in order to study the morphology of the disk and search for signs of planet formation. Results. SPHERE has delivered the deepest images ever obtained for AB Aur in scattered light. Among the many structures that are yet to be understood, we identified not only the inner spiral arms, but we also resolved a feature in the form of a twist in the eastern spiral at a separation of about 30 au. The twist of the spiral is perfectly reproduced with a planet-driven density wave model when projection effects are accounted for. We measured an azimuthal displacement with respect to the counterpart of this feature in the ALMA data, which is consistent with Keplerian motion on a 4-yr baseline. Another point sxce is detected near the edge of the inner ring, which is likely the result of scattering as opposed to the direct emission from a planet photosphere. We tentatively derived mass constraints for these two features. Conclusions. The twist and its apparent orbital motion could well be the first direct evidence of a connection between a protoplanet candidate and its manifestation as a spiral imprinted in the gas and dust distributions., Comment: accepted in Astronomy and Astrophysics, 8 pages, 5 figures

Analyzing Spitzer and Herschel archival measurements we identified a debris disk around the young K7/M0 star CP-72 2713. The system belongs to the 24Myr old $\beta$ Pic moving group. Our new 1.33mm continuum observation, obtained with the ALMA 7-m array, revealed an extended dust disk with a peak radius of 140au, probably tracing the location of the planetesimal belt in the system. The disk is outstandingly large compared to known spatially resolved debris disks and also to protoplanetary disks around stars of comparable masses. The dynamical excitation of the belt at this radius is found to be reconcilable with planetary stirring, while self-stirring by large planetesimals embedded in the belt can work only if these bodies form very rapidly, e.g. via pebble concentration. By analyzing the spectral energy distribution we derived a characteristic dust temperature of 43K and a fractional luminosity of 1.1$\times$10$^{-3}$. The latter value is prominently high, we know only four other similarly dust-rich Kuiper-belt analogs within 40pc of the Sun., Comment: Published in AJ, 20 pages, 8 figures; v2:typos corrected, references revised, minor changes in the abstract and the introduction

We used new ALMA $^{13}$CO and C$^{18}$O(3-2) observations obtained at high angular resolution ($\sim$0.2") together with previous CO(3-2) and (6-5) ALMA data and continuum maps at 1.3 and 0.8 mm in order to determine the gas properties (temperature, density, and kinematics) in the cavity and to a lesser extent in the outer disk of GG Tau A, the prototype of a young triple T Tauri star that is surrounded by a massive and extended Keplerian outer disk. By deprojecting, we studied the radial and azimuthal gas distribution and its kinematics. We also applied a new method to improve the deconvolution of the CO data and in particular better quantify the emission from gas inside the cavity. We perform local and nonlocal thermodynamic equilibrium studies in order to determine the excitation conditions and relevant physical parameters inside the ring and in the central cavity. Residual emission after removing a smooth-disk model indicates unresolved structures at our angular resolution, probably in the form of irregular rings or spirals. The outer disk is cold, with a temperature $<20$ K beyond 250 au that drops quickly (r$^{-1}$). The kinematics of the gas inside the cavity reveals infall motions at about 10% of the Keplerian speed. We derive the amount of gas in the cavity, and find that the brightest clumps, which contain about 10% of this mass, have kinetic temperatures 40$-$80 K, CO column densities of a few 10$^{17}$ cm$^{-2}$, and H$_2$ densities around 10$^7$ cm$^{-3}$. Although the gas in the cavity is only a small fraction of the disk mass, the mass accretion rate throughout the cavity is comparable to or higher than the stellar accretion rate. It is accordingly sufficient to sustain the circumstellar disks on a long timescale., Comment: 18 pages, 14 figures

The accuracy of masses of pre-main sequence (PMS) stars derived from their locations on the Hertzsprung-Russell Diagram (HRD) can be tested by comparison with accurate and precise masses determined independently. We present 29 single stars in the Taurus star-forming region (SFR) and 3 in the Ophiuchus SFR with masses measured dynamically to a precision of at least $10 \%$. Our results include 9 updated mass determinations and 3 that have not had their dynamical masses published before. This list of stars with fundamental, dynamical masses, M$_{dyn}$, is drawn from a larger list of 39 targets in the Taurus SFR and 6 in the Ophiuchus SFR. Placing the stars with accurate and precise dynamical masses on HRDs that do not include internal magnetic fields underestimates the mass compared to M$_{dyn}$ by about $30 \%$. Placing them on an HRD that does include magnetic fields yields mass estimates in much better agreement with M$_{dyn}$, with an average difference between M$_{dyn}$ and the estimated track mass of $0.01\pm0.02$~\msun. The ages of the stars, 3--10 MY on tracks that include magnetic fields, is older than the 1--3 MY indicated by the non-magnetic models. The older ages of T Tauri stars predicted by the magnetic models increase the time available for evolution of their disks and formation of the giant gas exoplanets. The agreement between our M$_{dyn}$ values and the masses on the magnetic field tracks provides indirect support for these older ages., Comment: Ap.J. to be published

Previous observations revealed the existence of CO gas at nearly protoplanetary level in several dust-rich debris disks around young A-type stars. Here we used the ALMA 7m-array to measure $^{13}$CO and C$^{18}$O emission toward two debris disks, 49 Cet and HD 32297, and detected similarly high CO content ($>$0.01M$_\oplus$). These high CO masses imply a highly efficient shielding of CO molecules against stellar and interstellar ultraviolet photons. Adapting a recent secondary gas disk model that considers both shielding by carbon atoms and self-shielding of CO, we can explain the observed CO level in both systems. Based on the derived gas densities we suggest that, in the HD 32297 disk, dust and gas are coupled and the dynamics of small grains is affected by the gaseous component. For 49 Cet, the question of coupling remains undecided. We found that the main stellar and disk propertiesof 49 Cet and HD 32297 are very similar to those of previously identified debris disks with high CO content. These objects constitute together the first known representatives of shielded debris disks., Comment: submitted to The Astrophysical Journal

Context. With its high complexity, large size, and close distance, the ringworld around GG Tau A is an appealing case to study the formation and evolution of protoplanetary disks around multiple star systems. However, investigations with radiative transfer models are usually neglecting the influence of the circumstellar dust around the individual stars. Aims. We investigate how circumstellar disks around the stars of GG Tau A are influencing the emission that is scattered at the circumbinary disk and if constraints on these circumstellar disks can be derived. Methods. We perform radiative transfer simulations with the code POLARIS to obtain spectral energy distributions and emission maps in the H-Band (near-infrared). Subsequently, we compare them with observations to achieve our aims. Results. We studied the ratio of polarized intensity at different locations in the circumbinary disk and conclude that the observed scattered-light near-infrared emission is best reproduced, if the circumbinary disk lies in the shadow of at least two co-planar circumstellar disks surrounding the central stars. This implies that the inner wall of the circumbinary disk is strongly obscured around the midplane, while the observed emission is actually dominated by the most upper disk layers. In addition, the inclined dark lane ("gap") on the western side of the circumbinary disk, which is a stable (non rotating) feature since ~20yr, can only be explained by the self-shadowing of a misaligned circumstellar disk surrounding one of the two components of the secondary close-binary star GG Tau Ab., Comment: 11 pages, 7 figures (appendix: 5 pages, 3 figures)

We report new dynamical masses for 5 pre-main sequence (PMS) stars in the L1495 region of the Taurus star-forming region (SFR) and 6 in the L1688 region of the Ophiuchus SFR. Since these regions have VLBA parallaxes these are absolute measurements of the stars' masses and are independent of their effective temperatures and luminosities. Seven of the stars have masses $<0.6$ solar masses, thus providing data in a mass range with little data, and of these, 6 are measured to precision $< 5 \%$. We find 8 stars with masses in the range 0.09 to 1.1 solar mass that agree well with the current generation of PMS evolutionary models. The ages of the stars we measured in the Taurus SFR are in the range 1-3 MY, and $<1$ MY for those in L1688. We also measured the dynamical masses of 14 stars in the ALMA archival data for Akeson~\&~Jensen's Cycle 0 project on binaries in the Taurus SFR. We find that the masses of 7 of the targets are so large that they cannot be reconciled with reported values of their luminosity and effective temperature. We suggest that these targets are themselves binaries or triples., Comment: 20 pages

Determining the gas density and temperature structures of protoplanetary disks is a fundamental task to constrain planet formation theories. This is a challenging procedure and most determinations are based on model-dependent assumptions. We attempt a direct determination of the radial and vertical temperature structure of the Flying Saucer disk, thanks to its favorable inclination of 90 degrees. We present a method based on the tomographic study of an edge-on disk. Using ALMA, we observe at 0.5$"$ resolution the Flying Saucer in CO J=2-1 and CS J=5-4. This edge-on disk appears in silhouette against the CO J=2-1 emission from background molecular clouds in $\rho$ Oph. The combination of velocity gradients due to the Keplerian rotation of the disk and intensity variations in the CO background as a function of velocity provide a direct measure of the gas temperature as a function of radius and height above the disk mid-plane. The overall thermal structure is consistent with model predictions, with a cold ($< 15-12 $~K), CO-depleted mid-plane, and a warmer disk atmosphere. However, we find evidence for CO gas along the mid-plane beyond a radius of about 200\,au, coincident with a change of grain properties. Such a behavior is expected in case of efficient rise of UV penetration re-heating the disk and thus allowing CO thermal desorption or favoring direct CO photo-desorption. CO is also detected up to 3-4 scale heights while CS is confined around 1 scale height above the mid-plane. The limits of the method due to finite spatial and spectral resolutions are also discussed. This method appears to be very promising to determine the gas structure of planet-forming disks, provided that the molecular data have an angular resolution which is high enough, of the order of $0.3 - 0.1"$ at the distance of the nearest star forming regions., Comment: 14 pages + 11 figures

We report the results of ALMA observations of a protoplanetary disk surrounding the Herbig Ae star AB Aurigae. We obtained high-resolution (0.1"; 14 au) images in $^{12}$CO (J=2-1) emission and in dust continuum at the wavelength of 1.3 mm. The continuum emission is detected at the center and at the ring with a radius of $\sim$ 120 au. The CO emission is dominated by two prominent spirals within the dust ring. These spirals are trailing and appear to be about 4 times brighter than their surrounding medium. Their kinematics is consistent with Keplerian rotation at an inclination of 23 degree. The apparent two-arm-spiral pattern is best explained by tidal disturbances created by an unseen companion located at 60--80 au, with dust confined in the pressure bumps created outside this companion orbit. An additional companion at r of 30 au, coinciding with the peak CO brightness and a large pitch angle of the spiral, would help to explain the overall emptiness of the cavity. Alternative mechanisms to excite the spirals are discussed. The origin of the large pitch angle detected here remain puzzling., Comment: 7 pages, 3 figures, accepted for publication in ApJ