2,245 results on '"Derks, J'
Search Results
2. Precision-cut liver slices as an ex vivo model to assess impaired hepatic glucose production
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Ligia Akemi Kiyuna, Kishore Alagere Krishnamurthy, Esther B. Homan, Miriam Langelaar-Makkinje, Albert Gerding, Trijnie Bos, Dorenda Oosterhuis, Ruben J. Overduin, Andrea B. Schreuder, Vincent E. de Meijer, Peter Olinga, Terry G. J. Derks, Karen van Eunen, Barbara M. Bakker, and Maaike H. Oosterveer
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Biology (General) ,QH301-705.5 - Abstract
Abstract Fasting hypoglycemia is a severe and incompletely understood symptom of various inborn errors of metabolism (IEM). Precision-cut liver slices (PCLS) represent a promising model for studying glucose production ex vivo. This study quantified the net glucose production of human and murine PCLS in the presence of different gluconeogenic precursors. Dihydroxyacetone-supplemented slices from the fed mice yielded the highest rate, further stimulated by forskolin and dibutyryl-cAMP. Moreover, using 13C isotope tracing, we assessed the contribution of glycogenolysis and gluconeogenesis to net glucose production over time. Pharmacological inhibition of the glucose 6-phosphate transporter SLC37A4 markedly reduced net glucose production and increased lactate secretion and glycogen storage, while glucose production was completely abolished in PCLS from glycogen storage disease type Ia and Ib patients. In conclusion, this study identifies PCLS as an effective ex vivo model to study hepatic glucose production and opens opportunities for its future application in IEM research and beyond.
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- 2024
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3. XCMS-METLIN: data-driven metabolite, lipid, and chemical analysis
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Martin Giera, Aries Aisporna, Winnie Uritboonthai, Linh Hoang, Rico J E Derks, Kara M Joseph, Erin S Baker, and Gary Siuzdak
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Biology (General) ,QH301-705.5 ,Medicine (General) ,R5-920 - Abstract
In this Correspondence, G. Siuzdak and colleagues present XCMS-METLIN, an extensive resource for metabolomics, lipidomics, and chemical analysis.
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- 2024
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4. Precision-cut liver slices as an ex vivo model to assess impaired hepatic glucose production
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Kiyuna, Ligia Akemi, Krishnamurthy, Kishore Alagere, Homan, Esther B., Langelaar-Makkinje, Miriam, Gerding, Albert, Bos, Trijnie, Oosterhuis, Dorenda, Overduin, Ruben J., Schreuder, Andrea B., de Meijer, Vincent E., Olinga, Peter, Derks, Terry G. J., van Eunen, Karen, Bakker, Barbara M., and Oosterveer, Maaike H.
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- 2024
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5. Image quality and metal artifact reduction in total hip arthroplasty CT: deep learning-based algorithm versus virtual monoenergetic imaging and orthopedic metal artifact reduction
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Selles, Mark, Wellenberg, Ruud H. H., Slotman, Derk J., Nijholt, Ingrid M., van Osch, Jochen A. C., van Dijke, Kees F., Maas, Mario, and Boomsma, Martijn F.
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- 2024
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6. Screening and surveillance of hepatocellular carcinoma by serum des‐gamma‐carboxy prothrombin in patients with glycogen storage disease type Ia
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A. B. Schreuder, R. J. Overduin, N. C. Peltenburg, L. deBoer, F. A. J. A. Bodewes, and T. G. J. Derks
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des‐gamma‐carboxy prothrombin ,glycogen storage disease type I ,hepatocellular adenoma ,hepatocellular carcinoma ,tumor markers ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 ,Genetics ,QH426-470 - Abstract
Abstract No sensitive tumor marker for hepatocellular carcinoma (HCC) is available for patients with glycogen storage disease type Ia (GSDIa), in whom alpha‐fetoprotein and carcino‐embryonic antigen levels often remain normal. We describe increased levels of the HCC tumor marker des‐gamma‐carboxy prothrombin (DCP) in GSDIa patients with HCC. In one case DCP levels normalized after liver transplantation. We recommend including DCP as a screening HCC tumor marker in the surveillance of patients with GSDIa.
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- 2024
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7. Image quality and metal artifact reduction in total hip arthroplasty CT: deep learning-based algorithm versus virtual monoenergetic imaging and orthopedic metal artifact reduction
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Mark Selles, Ruud H. H. Wellenberg, Derk J. Slotman, Ingrid M. Nijholt, Jochen A. C. van Osch, Kees F. van Dijke, Mario Maas, and Martijn F. Boomsma
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Arthroplasty (replacement, hip) ,Artificial intelligence ,Artifacts ,Deep learning ,Tomography (x-ray computed) ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Background To compare image quality, metal artifacts, and diagnostic confidence of conventional computed tomography (CT) images of unilateral total hip arthroplasty patients (THA) with deep learning-based metal artifact reduction (DL-MAR) to conventional CT and 130-keV monoenergetic images with and without orthopedic metal artifact reduction (O-MAR). Methods Conventional CT and 130-keV monoenergetic images with and without O-MAR and DL-MAR images of 28 unilateral THA patients were reconstructed. Image quality, metal artifacts, and diagnostic confidence in bone, pelvic organs, and soft tissue adjacent to the prosthesis were jointly scored by two experienced musculoskeletal radiologists. Contrast-to-noise ratios (CNR) between bladder and fat and muscle and fat were measured. Wilcoxon signed-rank tests with Holm-Bonferroni correction were used. Results Significantly higher image quality, higher diagnostic confidence, and less severe metal artifacts were observed on DL-MAR and images with O-MAR compared to images without O-MAR (p
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- 2024
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8. Intravoxel incoherent motion (IVIM)-derived perfusion fraction mapping for the visual evaluation of MR-guided high intensity focused ultrasound (MR-HIFU) ablation of uterine fibroids
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Derk J. Slotman, Lambertus W. Bartels, Ingrid M. Nijholt, Martijn Froeling, Judith A. F. Huirne, Chrit T.W Moonen, and Martijn F. Boomsma
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High-intensity focused ultrasound ablation ,leiomyoma ,magnetic resonance imaging ,diffusion weighted MRI ,intravoxel incoherent motion modeling (IVIM) ,Medical technology ,R855-855.5 - Abstract
AbstractBackground A method for periprocedural contrast agent-free visualization of uterine fibroid perfusion could potentially shorten magnetic resonance-guided high intensity focused ultrasound (MR-HIFU) treatment times and improve outcomes. Our goal was to test feasibility of perfusion fraction mapping by intravoxel incoherent motion (IVIM) modeling using diffusion-weighted MRI as method for visual evaluation of MR-HIFU treatment progression.Methods Conventional and T2-corrected IVIM-derived perfusion fraction maps were retrospectively calculated by applying two fitting methods to diffusion-weighted MRI data (b = 0, 50, 100, 200, 400, 600 and 800 s/mm2 at 1.5 T) from forty-four premenopausal women who underwent MR-HIFU ablation treatment of uterine fibroids. Contrast in perfusion fraction maps between areas with low perfusion fraction and surrounding tissue in the target uterine fibroid immediately following MR-HIFU treatment was evaluated. Additionally, the Dice similarity coefficient (DSC) was calculated between delineated areas with low IVIM-derived perfusion fraction and hypoperfusion based on CE-T1w.Results Average perfusion fraction ranged between 0.068 and 0.083 in areas with low perfusion fraction based on visual assessment, and between 0.256 and 0.335 in surrounding tissues (all p
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- 2024
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9. Hepcidin, Interleukin-6 Levels and Iron Metabolism Parameters in Patients with Hepatic Glycogen Storage Diseases: A Cross-Sectional Study
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Tatiéle Nalin, Fernanda Sperb-Ludwig, Marina Siebert, Gustavo Mottin Rizowy, David A. Weinstein, Terry G. J. Derks, Carolina F. M. de Souza, and Ida V. D. Schwartz
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Glycogen storage diseases ,cytokines ,anemia ,iron metabolism ,hepcidin ,Medicine (General) ,R5-920 - Abstract
Abstract Hepatic glycogen storage diseases (GSD) are characterized by recurrent episodes of hypoglycemia, and anemia has been recognized as a frequent complication of these disorders.This was a convenience cross-sectional study to evaluate hepcidin and IL-6 concentrations in patients with hepatic GSD and their association with anemia and other parameters of iron metabolism.Levels of hepcidin, IL-6, and markers of iron metabolism were measured in 32 patients receiving uncooked cornstarch therapy for GSD (GSD Ia= 18; Ib= 7; III= 3; IXa= 3; IXb= 1; median age 9.5 years). IL-6 concentrations were compared to those of 8 individuals heterozygous for GSD. Nine patients were anemic and five patients had hepatic adenomas. IL-6 levels were higher in patients than in heterozygotes. Eight patients had hyperferritinemia, and one had elevated transferrin saturation as well. Hepcidin correlated positively with ferritin levels. IL-6 correlated with hemoglobin, iron, transferrin, and transferrin saturation. There was no correlation between hepcidin and IL-6 levels. Patients with GSD Ib had the highest IL-6 levels.Anemia is a common finding in hepatic GSD, especially in GSD Ib, the type of GSD associated with the highest IL-6 levels. These findings suggest that inflammation is strongly associated with development of anemia in GSD Ib.
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- 2024
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10. KCNQ5 activation by tannins mediates vasorelaxant effects of barks used in Native American botanical medicine
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Manville, Rían W, Redford, Kaitlyn E, Horst, Jennifer, Hogenkamp, Derk J, Jepps, Thomas A, and Abbott, Geoffrey W
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Medical Physiology ,Biomedical and Clinical Sciences ,Complementary and Integrative Health ,Animals ,Humans ,KCNQ Potassium Channels ,Mesenteric Arteries ,Rats ,Tannins ,Vasodilator Agents ,American Indian or Alaska Native ,bark ,hypotensive ,KCNQ ,Kv7 ,tannin ,vasorelaxant ,Biochemistry and Cell Biology ,Physiology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical physiology - Abstract
Tree and shrub barks have been used as folk medicine by numerous cultures across the globe for millennia, for a variety of indications, including as vasorelaxants and antispasmodics. Here, using electrophysiology and myography, we discovered that the KCNQ5 voltage-gated potassium channel mediates vascular smooth muscle relaxant effects of barks used in Native American folk medicine. Bark extracts (1%) from Birch, Cramp Bark, Slippery Elm, White Oak, Red Willow, White Willow, and Wild Cherry each strongly activated KCNQ5 expressed in Xenopus oocytes. Testing of a subset including both the most and the least efficacious extracts revealed that Red Willow, White Willow, and White Oak KCNQ-dependently relaxed rat mesenteric arteries; in contrast, Black Haw bark neither activated KCNQ5 nor induced vasorelaxation. Two compounds common to the active barks (gallic acid and tannic acid) had similarly potent and efficacious effects on both KCNQ5 activation and vascular relaxation, and this together with KCNQ5 modulation by other tannins provides a molecular basis for smooth muscle relaxation effects of Native American folk medicine bark extracts.
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- 2022
11. Assessment of the current and emerging criteria for the histopathological classification of lung neuroendocrine tumours in the lungNENomics project
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Mathian, É., Drouet, Y., Sexton-Oates, A., Papotti, M.G., Pelosi, G., Vignaud, J.-M., Brcic, L., Mansuet-Lupo, A., Damiola, F., Altun, C., Berthet, J.-P., Fournier, C.B., Brustugun, O.T., Centonze, G., Chalabreysse, L., de Montpréville, V.T., di Micco, C.M., Fadel, E., Gadot, N., Graziano, P., Hofman, P., Hofman, V., Lacomme, S., Lund-Iversen, M., Mangiante, L., Milione, M., Muscarella, L.A., Perrin, C., Planchard, G., Popper, H., Rousseau, N., Roz, L., Sabella, G., Tabone-Eglinger, S., Voegele, C., Volante, M., Walter, T., Dingemans, A.-M., Moonen, L., Speel, E.J., Derks, J., Girard, N., Chen, L., Alcala, N., Fernandez-Cuesta, L., Lantuejoul, S., and Foll, M.
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- 2024
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12. Glycogen storage diseases
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Hannah, William B., Derks, Terry G. J., Drumm, Mitchell L., Grünert, Sarah C., Kishnani, Priya S., and Vissing, John
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- 2023
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13. Personalised modelling of clinical heterogeneity between medium-chain acyl-CoA dehydrogenase patients
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Odendaal, Christoff, Jager, Emmalie A., Martines, Anne-Claire M. F., Vieira-Lara, Marcel A., Huijkman, Nicolette C. A., Kiyuna, Ligia A., Gerding, Albert, Wolters, Justina C., Heiner-Fokkema, Rebecca, van Eunen, Karen, Derks, Terry G. J., and Bakker, Barbara M.
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- 2023
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14. No incision required for long-lasting symptom relief in a selection of women suffering from uterine fibroids
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Slotman, Derk J., Nijholt, Ingrid M., Schutte, Joke M., and Boomsma, Martijn F.
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- 2023
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15. Personalised modelling of clinical heterogeneity between medium-chain acyl-CoA dehydrogenase patients
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Christoff Odendaal, Emmalie A. Jager, Anne-Claire M. F. Martines, Marcel A. Vieira-Lara, Nicolette C. A. Huijkman, Ligia A. Kiyuna, Albert Gerding, Justina C. Wolters, Rebecca Heiner-Fokkema, Karen van Eunen, Terry G. J. Derks, and Barbara M. Bakker
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Medium-chain acyl-CoA dehydrogenase deficiency ,Mitochondrial fatty acid oxidation ,Personalised medicine ,Metabolite partitioning ,Kinetic modelling ,Phenotypic heterogeneity ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Monogenetic inborn errors of metabolism cause a wide phenotypic heterogeneity that may even differ between family members carrying the same genetic variant. Computational modelling of metabolic networks may identify putative sources of this inter-patient heterogeneity. Here, we mainly focus on medium-chain acyl-CoA dehydrogenase deficiency (MCADD), the most common inborn error of the mitochondrial fatty acid oxidation (mFAO). It is an enigma why some MCADD patients—if untreated—are at risk to develop severe metabolic decompensations, whereas others remain asymptomatic throughout life. We hypothesised that an ability to maintain an increased free mitochondrial CoA (CoASH) and pathway flux might distinguish asymptomatic from symptomatic patients. Results We built and experimentally validated, for the first time, a kinetic model of the human liver mFAO. Metabolites were partitioned according to their water solubility between the bulk aqueous matrix and the inner membrane. Enzymes are also either membrane-bound or in the matrix. This metabolite partitioning is a novel model attribute and improved predictions. MCADD substantially reduced pathway flux and CoASH, the latter due to the sequestration of CoA as medium-chain acyl-CoA esters. Analysis of urine from MCADD patients obtained during a metabolic decompensation showed an accumulation of medium- and short-chain acylcarnitines, just like the acyl-CoA pool in the MCADD model. The model suggested some rescues that increased flux and CoASH, notably increasing short-chain acyl-CoA dehydrogenase (SCAD) levels. Proteome analysis of MCADD patient-derived fibroblasts indeed revealed elevated levels of SCAD in a patient with a clinically asymptomatic state. This is a rescue for MCADD that has not been explored before. Personalised models based on these proteomics data confirmed an increased pathway flux and CoASH in the model of an asymptomatic patient compared to those of symptomatic MCADD patients. Conclusions We present a detailed, validated kinetic model of mFAO in human liver, with solubility-dependent metabolite partitioning. Personalised modelling of individual patients provides a novel explanation for phenotypic heterogeneity among MCADD patients. Further development of personalised metabolic models is a promising direction to improve individualised risk assessment, management and monitoring for inborn errors of metabolism.
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- 2023
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16. Diffusion-weighted MRI with deep learning for visualizing treatment results of MR-guided HIFU ablation of uterine fibroids
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Slotman, Derk J., Bartels, Lambertus W., Zijlstra, Aylene, Verpalen, Inez M., van Osch, Jochen A. C., Nijholt, Ingrid M., Heijman, Edwin, van ‘t Veer-ten Kate, Miranda, de Boer, Erwin, van den Hoed, Rolf D., Froeling, Martijn, and Boomsma, Martijn F.
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- 2023
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17. NMR-Based Metabolomics: Monitoring Metabolic Response to Physical Exercise
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Verhoeven, Aswin, Derks, Rico J., Giera, Martin, Ivanisevic, Julijana, editor, and Giera, Martin, editor
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- 2023
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18. Patient‐reported outcomes on empagliflozin treatment in glycogen storage disease type Ib: An international questionnaire study
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Sarah C. Grünert, Annieke Venema, Jamas LaFreniere, Blair Schneider, Enrique Contreras, Saskia B. Wortmann, and Terry G. J. Derks
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empagliflozin ,glycogen storage disease type Ib ,neutropenia ,quality of life ,SGLT2 inhibitor ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 ,Genetics ,QH426-470 - Abstract
Abstract In patients with glycogen storage disease type Ib (GSD Ib), quality of life is severely hampered by neutropenia and neutropenia‐associated symptoms. SGLT2 inhibitors are a new treatment option and have shown improved medical outcomes in more than 120 patients so far. The aim of this international questionnaire study was to assess patient‐reported outcomes of this new treatment in GSD Ib patients. Patients and caregivers of pediatric patients were invited to complete a web‐based questionnaire. This was designed to evaluate treatment effects of the SGLT2 inhibitor empagliflozin on clinical symptoms and important aspects of daily life including physical performance, sleep, social and work life, traveling, socioeconomic aspects, and quality of life. The questionnaire was completed by 73 respondents from 17 different countries. The mean duration of treatment was 15 months, the cumulative treatment time was 94.8 years. More than 80% of patients reported an improved quality of life. The number of hospitalizations was reduced (66% of patients), as well as the number of days absent from school or work. Granulocyte colony‐stimulating factor (G‐CSF) treatment could be stopped in 49% of patients and reduced in another 42%. Clear improvement of neutropenia and all neutropenia‐associated symptoms was reported by the majority of patients. Additionally, patients or caregivers reported positive effects on appetite (63%), level of activity (75%), overall well‐being (96%), and sleep (63%). Empagliflozin positively impacts many aspects of daily life including work and social life and thereby significantly improves quality of life of patients and caregivers.
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- 2023
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19. Do differences in diagnostic criteria for late fetal growth restriction matter?
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Arabin, B., Berger, A., Bergman, E., Bhide, A., Bilardo, C.M., Breeze, A.C., Brodszki, J., Calda, P., Cesari, E., Cetin, I., Derks, J., Ebbing, C., Ferrazzi, E., Frusca, T., Ganzevoort, W., Gyselaers, W., Hecher, K., Klaritsch, P., Krofta, L., Lindgren, P., Lobmaier, S.M., Marlow, N, Maruotti, G.M., Mecacci, F., Myklestad, K., Prefumo, F., Raio, L., Richter, J., Sande, R.K., Valensise, H., Visser, G.H.A., Wee, L., Mylrea-Foley, Bronacha, Napolitano, Raffaele, Gordijn, Sanne, Wolf, Hans, Lees, Christoph C., and Stampalija, Tamara
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- 2023
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20. Genome-wide RNA polymerase stalling shapes the transcriptome during aging
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Gyenis, Akos, Chang, Jiang, Demmers, Joris J. P. G., Bruens, Serena T., Barnhoorn, Sander, Brandt, Renata M. C., Baar, Marjolein P., Raseta, Marko, Derks, Kasper W. J., Hoeijmakers, Jan H. J., and Pothof, Joris
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- 2023
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21. Whole-body CD8+ T cell visualization before and during cancer immunotherapy: a phase 1/2 trial
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Kist de Ruijter, Laura, van de Donk, Pim P., Hooiveld-Noeken, Jahlisa S., Giesen, Danique, Elias, Sjoerd G., Lub-de Hooge, Marjolijn N., Oosting, Sjoukje F., Jalving, Mathilde, Timens, Wim, Brouwers, Adrienne H., Kwee, Thomas C., Gietema, Jourik A., Fehrmann, Rudolf S. N., Fine, Bernard M., Sanabria Bohórquez, Sandra M., Yadav, Mahesh, Koeppen, Hartmut, Jing, Jing, Guelman, Sebastian, Lin, Mark T., Mamounas, Michael J., Eastham, Jeffrey Ryan, Kimes, Patrick K., Williams, Simon P., Ungewickell, Alexander, de Groot, Derk J. A., and de Vries, Elisabeth G. E.
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- 2022
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22. Focused Ultrasound and RadioTHERapy for non-invasive palliative pain treatment in patients with bone metastasis: a study protocol for the three armed randomized controlled FURTHER trial
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Derk J. Slotman, Marcia M. T. J. Bartels, Cyril J. Ferrer, Clemens Bos, Lambertus W. Bartels, Martijn F. Boomsma, Erik C. J. Phernambucq, Ingrid M. Nijholt, Alessio G. Morganti, Giambattista Siepe, Milly Buwenge, Holger Grüll, Grischa Bratke, Sin Yuin Yeo, Roberto Blanco Sequeiros, Heikki Minn, Mira Huhtala, Alessandro Napoli, Francesca De Felice, Carlo Catalano, Alberto Bazzocchi, Chiara Gasperini, Laura Campanacci, Julia Simões Corrêa Galendi, Dirk Müller, Manon N. G. J. A. Braat, Chrit Moonen, Helena M. Verkooijen, and on behalf of the FURTHER consortium
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(MeSH): Cancer pain ,Palliative care ,Palliative therapy ,Pain management ,Neoplasm metastasis ,Bone metastases ,Medicine (General) ,R5-920 - Abstract
Abstract Background Cancer-induced bone pain (CIBP), caused by bone metastases, is a common complication of cancer and strongly impairs quality of life (QoL). External beam radiotherapy (EBRT) is the current standard of care for treatment of CIBP. However, approximately 45% of patients have no adequate pain response after EBRT. Magnetic resonance image-guided high-intensity focused ultrasound (MR-HIFU) may improve pain palliation in this patient population. The main objective of this trial was to compare MR-HIFU, EBRT, and MR-HIFU + EBRT for the palliative treatment of bone metastases. Methods/design The FURTHER trial is an international multicenter, three-armed randomized controlled trial. A total of 216 patients with painful bone metastases will be randomized in a 1:1:1 ratio to receive EBRT only, MR-HIFU only, or combined treatment with EBRT followed by MR-HIFU. During a follow-up period of 6 months, patients will be contacted at eight time points to retrieve information about their level of pain, QoL, and the occurrence of (serious) adverse events. The primary outcome of the trial is pain response at 14 days after start of treatment. Secondary outcomes include pain response at 14 days after trial enrolment, pain scores (daily until the 21st day and at 4, 6, 12 and 24 weeks), toxicity, adverse events, QoL, and survival. Cost-effectiveness and cost-utility analysis will be conducted. Discussion The FURTHER trial aims to evaluate the effectiveness and cost-effectiveness of MR-HIFU—alone or in combination with EBRT—compared to EBRT to relieve CIBP. The trial will be performed in six hospitals in four European countries, all of which are partners in the FURTHER consortium. Trial registration The FURTHER trial is registered under the Netherlands Trials Register number NL71303.041.19 and ClinicalTrials.gov registration number NCT04307914. Date of trial registration is 13–01-2020.
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- 2022
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23. Disorders of Carbohydrate Absorption, Transmembrane Transport and Metabolism
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Derks, Terry G. J., Lubout, Charlotte M. A., Woidy, Mathias, Santer, René, Blau, Nenad, editor, Dionisi Vici, Carlo, editor, Ferreira, Carlos R., editor, Vianey-Saban, Christine, editor, and van Karnebeek, Clara D. M., editor
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- 2022
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24. Het lichaam als (gedempte) klankkast voor emotie : Hoe alexithymie steeds meer ‘body’ krijgt
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Koelen, J. A., Derks, Y. P. M. J., Eurelings, E.H.M., editor, Kooiman, C.G., editor, and Lub, M.H., editor
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- 2022
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25. Abnormal glucose homeostasis and fasting intolerance in patients with congenital porto-systemic shunts
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Mirjam E. van Albada, Pratik Shah, Terry G. J. Derks, Sabine Fuchs, Judith J. M. Jans, Valérie McLin, and Hubert P. J. van der Doef
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hypoglycaemia ,hyperinsulinism ,congenital porto-systemic shunt ,portal circulation ,glucose metabolism ,insulin ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
In physiological glucose homeostasis, the liver plays a crucial role in the extraction of glucose from the portal circulation and storage as glycogen to enable release through glycogenolysis upon fasting. In addition, insulin secreted by the pancreas is partly eliminated from the systemic circulation by hepatic first-pass. Therefore, patients with a congenital porto-systemic shunt present a unique combination of (a) postabsorptive hyperinsulinemic hypoglycaemia (HH) because of decreased insulin elimination and (b) fasting (ketotic) hypoglycaemia because of decreased glycogenolysis. Patients with porto-systemic shunts therefore provide important insight into the role of the portal circulation and hepatic function in different phases of glucose homeostasis.
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- 2023
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26. Synthetic CT for the planning of MR-HIFU treatment of bone metastases in pelvic and femoral bones: a feasibility study
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Lena, Beatrice, Florkow, Mateusz C., Ferrer, Cyril J., van Stralen, Marijn, Seevinck, Peter R., Vonken, Evert-Jan P. A., Boomsma, Martijn F., Slotman, Derk J., Viergever, Max A., Moonen, Chrit T. W., Bos, Clemens, and Bartels, Lambertus W.
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- 2022
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27. Serum sex hormone-binding globulin levels are reduced and inversely associated with intrahepatic lipid content and saturated fatty acid fraction in adult patients with glycogen storage disease type 1a
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Simons, P. I. H. G., Valkenburg, O., Telgenkamp, I., van der Waaij, K. M., de Groot, D. M., Veeraiah, P., Bons, J. A. P., Derks, T. G. J., Schalkwijk, C. G., Schrauwen-Hinderling, V. B., Stehouwer, C. D. A., and Brouwers, M. C. G. J.
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- 2022
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28. Positive allosteric modulators of nonbenzodiazepine γ-aminobutyric acidA receptor subtypes for the treatment of chronic pain
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Johnstone, Timothy BC, Xie, Jennifer Y, Qu, Chaoling, Wasiak, David J, Hogenkamp, Derk J, Porreca, Frank, and Gee, Kelvin W
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Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Neurosciences ,Clinical Sciences ,Pain Research ,Neurodegenerative ,Peripheral Neuropathy ,Chronic Pain ,Behavioral and Social Science ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Allosteric Regulation ,Animals ,Conditioning ,Operant ,Disease Models ,Animal ,Dose-Response Relationship ,Drug ,GABA Modulators ,HIV Infections ,Hyperalgesia ,Male ,Nucleus Accumbens ,Pain Measurement ,Pain Threshold ,Patch-Clamp Techniques ,Peripheral Nerve Injuries ,Physical Endurance ,RNA ,Messenger ,Rats ,Rats ,Sprague-Dawley ,Receptors ,GABA ,GABA(A) receptors ,Positive allosteric modulation ,beta(2/3) subunits ,Neuropathic pain ,Conditioned place preference ,Dopamine release ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Anesthesiology ,Biomedical and clinical sciences ,Health sciences ,Psychology - Abstract
Chronic neuropathic pain may be caused, in part, by loss of inhibition in spinal pain processing pathways due to attenuation of local GABAergic tone. Nociception and nocifensive behaviors are reduced after enhancement of tonically activated extrasynaptic GABAAR-mediated currents by agonist ligands for δ subunit-containing GABAARs. However, typical ligands that target δ subunit-containing GABAARs are limited due to sedative effects at higher doses. We used the spinal nerve ligation (SNL) and gp120 models of experimental neuropathic pain to evaluate compound 2-261, a nonbenzodiazepine site positive allosteric modulator of α4β3δ GABAARs optimized to be nonsedative by selective activation of β2/3-subunit-containing GABAARs over receptor subtypes incorporating β1 subunits. Similar levels of 2-261 were detected in the brain and plasma after intraperitoneal administration. Although systemic 2-261 did not alter sensory thresholds in sham-operated animals, it significantly reversed SNL-induced thermal and tactile hypersensitivity in a GABAAR-dependent fashion. Intrathecal 2-261 produced conditioned place preference and elevated dopamine levels in the nucleus accumbens of nerve-injured, but not sham-operated, rats. In addition, systemic pretreatment with 2-261 blocked conditioned place preference from spinal clonidine in SNL rats. Moreover, 2-261 reversed thermal hyperalgesia and partially reversed tactile allodynia in the gp120 model of HIV-related neuropathic pain. The effects of 2-261 likely required interaction with the α4β3δ GABAAR because 2-301, a close structural analog of 2-261 with limited extrasynaptic receptor efficacy, was not active. Thus, 2-261 may produce pain relief with diminished side effects through selective modulation of β2/3-subunit-containing extrasynaptic GABAARs.
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- 2019
29. Focused Ultrasound and RadioTHERapy for non-invasive palliative pain treatment in patients with bone metastasis: a study protocol for the three armed randomized controlled FURTHER trial
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Slotman, Derk J., Bartels, Marcia M. T. J., Ferrer, Cyril J., Bos, Clemens, Bartels, Lambertus W., Boomsma, Martijn F., Phernambucq, Erik C. J., Nijholt, Ingrid M., Morganti, Alessio G., Siepe, Giambattista, Buwenge, Milly, Grüll, Holger, Bratke, Grischa, Yeo, Sin Yuin, Blanco Sequeiros, Roberto, Minn, Heikki, Huhtala, Mira, Napoli, Alessandro, De Felice, Francesca, Catalano, Carlo, Bazzocchi, Alberto, Gasperini, Chiara, Campanacci, Laura, Simões Corrêa Galendi, Julia, Müller, Dirk, Braat, Manon N. G. J. A., Moonen, Chrit, and Verkooijen, Helena M.
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- 2022
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30. Repurposing SGLT2 inhibitors: Treatment of renal proximal tubulopathy in Fanconi‐Bickel syndrome with empagliflozin.
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Overduin, Ruben J., Grünert, Sarah C., Besouw, Martine T. P., Bolhuis, Mathieu S., Groen, Joost, Schreuder, Andrea B., Woidy, Mathias, Murko, Simona, Santer, René, and Derks, Terry G. J.
- Abstract
Renal proximal tubulopathy in Fanconi‐Bickel syndrome is caused by impaired basolateral glucose transport via GLUT2 and consequently, intracellular accumulation of glucose and glycogen. SGLT2 inhibitors act on apical glucose reabsorption of renal proximal tubular cells. The purpose of this study was to retrospectively describe the first experiences with repurposing the SGLT2 inhibitor empagliflozin to treat the generalized tubulopathy in Fanconi‐Bickel syndrome. A case series was conducted of seven persons from five families (five males, two females; three children, who were 14y5m, 2y9m, and 1y6m old) with genetically confirmed Fanconi‐Bickel syndrome, off‐label treated with empagliflozin. Median (range) age at start of empagliflozin was 27 years (1y6m – 61y) and duration of follow‐up under empagliflozin treatment was 169 days (57–344). Under empagliflozin (up to 25 mg/d), biochemical parameters of tubular cell integrity (urinary N‐acetyl‐glucosaminidase) and/or tubular functions (including urinary α1‐microglobulin) improved in all persons with Fanconi‐Bickel syndrome, albeit to varying degrees. Clinically, supplementations (i.e., phosphate, alkali, carnitine, and alfacalcidol) could be completely discontinued in the three children, whereas results in the four adult patients were more variable and not as significant. Empagliflozin was well‐tolerated and no symptomatic hypoglycemia was observed. In conclusion, SGLT2 inhibitors such as empagliflozin shift the metabolic block in Fanconi‐Bickel syndrome, that is, they intervene specifically in the underlying pathophysiology and can thus attenuate renal proximal tubulopathy, especially when started in early childhood. [ABSTRACT FROM AUTHOR]
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- 2024
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31. A Delphi Survey Study to Formulate Statements on the Treatability of Inherited Metabolic Disorders to Decide on Eligibility for Newborn Screening
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Abigail Veldman, M. B. Gea Kiewiet, Dineke Westra, Annet M. Bosch, Marion M. G. Brands, René I. F. M. de Coo, Terry G. J. Derks, Sabine A. Fuchs, Johanna. M. P. van den Hout, Hidde H. Huidekoper, Leo A. J. Kluijtmans, Klaas Koop, Charlotte M. A. Lubout, Margaretha F. Mulder, Bianca Panis, M. Estela Rubio-Gozalbo, Monique G. de Sain-van der Velden, Jaqueline Schaefers, Andrea B. Schreuder, Gepke Visser, Ron A. Wevers, Frits A. Wijburg, M. Rebecca Heiner-Fokkema, and Francjan J. van Spronsen
- Subjects
newborn screening ,treatability ,treatable ,Wilson and Junger criteria ,inborn errors of metabolism ,inherited metabolic disorders ,Pediatrics ,RJ1-570 - Abstract
The Wilson and Jungner (W&J) and Andermann criteria are meant to help select diseases eligible for population-based screening. With the introduction of next-generation sequencing (NGS) methods for newborn screening (NBS), more inherited metabolic diseases (IMDs) can technically be included, and a revision of the criteria was attempted. This study aimed to formulate statements and investigate whether those statements could elaborate on the criterion of treatability for IMDs to decide on eligibility for NBS. An online Delphi study was started among a panel of Dutch IMD experts (EPs). EPs evaluated, amended, and approved statements on treatability that were subsequently applied to 10 IMDs. After two rounds of Delphi, consensus was reached on 10 statements. Application of these statements selected 5 out of 10 IMDs proposed for this study as eligible for NBS, including 3 IMDs in the current Dutch NBS. The statement: ‘The expected benefit/burden ratio of early treatment is positive and results in a significant health outcome’ contributed most to decision-making. Our Delphi study resulted in 10 statements that can help to decide on eligibility for inclusion in NBS based on treatability, also showing that other criteria could be handled in a comparable way. Validation of the statements is required before these can be applied as guidance to authorities.
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- 2023
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32. A retrospective study of eating and psychosocial problems in patients with hepatic glycogen storage diseases and idiopathic ketotic hypoglycemia: Towards a standard set of patient‐reported outcome measures
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Annieke Venema, Fabian Peeks, Marlies deBruijn‐van der Veen, Foekje deBoer, Marieke J. Fokkert‐Wilts, Charlotte M. A. Lubout, Bibi Huskens, Eric Dumont, Sandra Mulkens, and Terry G. J. Derks
- Subjects
Avoidant/Restrictive Food Intake Disorder ,dietary treatment ,eating problems ,glycogen storage disease ,patient‐reported outcome measures ,quality of life ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 ,Genetics ,QH426-470 - Abstract
Abstract There is a paucity in literature on eating and psychosocial problems in patients with hepatic glycogen storage disease (GSD) and idiopathic ketotic hypoglycemia (IKH), problems that can greatly affect quality of life. This is a monocentre, retrospective, observational mixed method study of patients with hepatic GSD or IKH treated at the Beatrix Children's Hospital Groningen, who had been referred to SeysCentra, a specialist centre for the treatment of eating problems. Additionally, a systematic literature review has been performed to identify instruments to quantify patient‐reported outcome measures of psychosocial problems in hepatic GSD patients. Sixteen patients from 12 families were included with ages ranging between 3 and 24 years. Five out of sixteen patients were diagnosed with Avoidant/Restrictive Food Intake Disorder and six patients showed characteristics of this disorder. Fourteen patients experienced sleeping problems, and 11 out of 12 parent couples experienced stress about the illness of their child. We subsequently identified 26 instruments to quantify patient‐reported outcome measures for GSD patients. This study demonstrates that GSD patients can develop Avoidant/Restrictive Food Intake Disorder influencing quality of life at multiple domains. The identification of instruments to assess psychosocial wellbeing is an important step towards a standard set of patient‐reported outcome measures.
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- 2022
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33. Intravoxel incoherent motion (IVIM)-derived perfusion fraction mapping for the visual evaluation of MR-guided high intensity focused ultrasound (MR-HIFU) ablation of uterine fibroids
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Slotman, Derk J., primary, Bartels, Lambertus W., additional, Nijholt, Ingrid M., additional, Froeling, Martijn, additional, Huirne, Judith A. F., additional, Moonen, Chrit T.W, additional, and Boomsma, Martijn F., additional
- Published
- 2024
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34. Tandem Mass Spectrometry across Platforms
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Hoang, Corey, primary, Uritboonthai, Winnie, additional, Hoang, Linh, additional, Billings, Elizabeth M., additional, Aisporna, Aries, additional, Nia, Farshad A., additional, Derks, Rico J. E., additional, Williamson, James R., additional, Giera, Martin, additional, and Siuzdak, Gary, additional
- Published
- 2024
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35. Pathogenic neurofibromatosis type 1 (NF1) RNA splicing resolved by targeted RNAseq
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R. Koster, R. D. Brandão, D. Tserpelis, C. E. P. van Roozendaal, C. N. van Oosterhoud, K. B. M. Claes, A. D. C. Paulussen, M. Sinnema, M. Vreeburg, V. van der Schoot, C. T. R. M. Stumpel, M. P. G. Broen, L. Spruijt, M. C. J. Jongmans, S. A. J. Lesnik Oberstein, A. S. Plomp, M. Misra-Isrie, F. A. Duijkers, M. J. Louwers, R. Szklarczyk, K. W. J. Derks, H. G. Brunner, A. van den Wijngaard, M. van Geel, and M. J. Blok
- Subjects
Medicine ,Genetics ,QH426-470 - Abstract
Abstract Neurofibromatosis type 1 (NF1) is caused by loss-of-function variants in the NF1 gene. Approximately 10% of these variants affect RNA splicing and are either missed by conventional DNA diagnostics or are misinterpreted by in silico splicing predictions. Therefore, a targeted RNAseq-based approach was designed to detect pathogenic RNA splicing and associated pathogenic DNA variants. For this method RNA was extracted from lymphocytes, followed by targeted RNAseq. Next, an in-house developed tool (QURNAs) was used to calculate the enrichment score (ERS) for each splicing event. This method was thoroughly tested using two different patient cohorts with known pathogenic splice-variants in NF1. In both cohorts all 56 normal reference transcript exon splice junctions, 24 previously described and 45 novel non-reference splicing events were detected. Additionally, all expected pathogenic splice-variants were detected. Eleven patients with NF1 symptoms were subsequently tested, three of which have a known NF1 DNA variant with a putative effect on RNA splicing. This effect could be confirmed for all 3. The other eight patients were previously without any molecular confirmation of their NF1-diagnosis. A deep-intronic pathogenic splice variant could now be identified for two of them (25%). These results suggest that targeted RNAseq can be successfully used to detect pathogenic RNA splicing variants in NF1.
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- 2021
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36. Non-invasively measured brain activity and radiological progression in diffuse glioma
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T. Numan, S. D. Kulik, B. Moraal, J. C. Reijneveld, C. J. Stam, P. C. de Witt Hamer, J. Derks, A. M. E. Bruynzeel, M. E. van Linde, P. Wesseling, M. C. M. Kouwenhoven, M. Klein, T. Würdinger, F. Barkhof, J. J. G. Geurts, A. Hillebrand, and L. Douw
- Subjects
Medicine ,Science - Abstract
Abstract Non-invasively measured brain activity is related to progression-free survival in glioma patients, suggesting its potential as a marker of glioma progression. We therefore assessed the relationship between brain activity and increasing tumor volumes on routine clinical magnetic resonance imaging (MRI) in glioma patients. Postoperative magnetoencephalography (MEG) was recorded in 45 diffuse glioma patients. Brain activity was estimated using three measures (absolute broadband power, offset and slope) calculated at three spatial levels: global average, averaged across the peritumoral areas, and averaged across the homologues of these peritumoral areas in the contralateral hemisphere. Tumors were segmented on MRI. Changes in tumor volume between the two scans surrounding the MEG were calculated and correlated with brain activity. Brain activity was compared between patient groups classified into having increasing or stable tumor volume. Results show that brain activity was significantly increased in the tumor hemisphere in general, and in peritumoral regions specifically. However, none of the measures and spatial levels of brain activity correlated with changes in tumor volume, nor did they differ between patients with increasing versus stable tumor volumes. Longitudinal studies in more homogeneous subgroups of glioma patients are necessary to further explore the clinical potential of non-invasively measured brain activity.
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- 2021
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37. Important Lessons on Long-Term Stability of Amino Acids in Stored Dried Blood Spots
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Allysa M. Dijkstra, Pim de Blaauw, Willemijn J. van Rijt, Hanneke Renting, Ronald G. H. J. Maatman, Francjan J. van Spronsen, Rose E. Maase, Peter C. J. I. Schielen, Terry G. J. Derks, and M. Rebecca Heiner-Fokkema
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amino acids ,dried blood spots ,inborn metabolic diseases ,metabolite stability ,neonatal blood spot screening ,tandem mass spectrometry ,Pediatrics ,RJ1-570 - Abstract
Residual heel prick Dried Blood Spots (DBS) are valuable samples for retrospective investigation of inborn metabolic diseases (IMD) and biomarker analyses. Because many metabolites suffer time-dependent decay, we investigated the five-year stability of amino acids (AA) in residual heel prick DBS. In 2019/2020, we analyzed 23 AAs in 2170 residual heel prick DBS from the Dutch neonatal screening program, stored from 2013–2017 (one year at +4 °C and four years at room temperature), using liquid chromatography mass-spectrometry. Stability was assessed by AA changes over the five years. Hydroxyproline could not be measured accurately and was not further assessed. Concentrations of 19 out of the remaining 22 AAs degraded significantly, ranked from most to least stable: aspartate, isoleucine, proline, valine, leucine, tyrosine, alanine, phenylalanine, threonine, citrulline, glutamate, serine, ornithine, glycine, asparagine, lysine, taurine, tryptophan and glutamine. Arginine, histidine and methionine concentrations were below the limit of detection and were likely to have been degraded within the first year of storage. AAs in residual heel prick DBS stored at room temperature are subject to substantial degradation, which may cause incorrect interpretation of test results for retrospective biomarker studies and IMD diagnostics. Therefore, retrospective analysis of heel prick blood should be done in comparison to similarly stored heel prick blood from controls.
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- 2023
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38. Hospital nurses’ knowledge regarding older patients: a multicenter study
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Christel T. A. J. Derks, Marjo M. G. M. Hutten - van den Elsen, Lysette J. Hakvoort, Mariëlle P. J. van Mersbergen, RENurse Consortium, Marieke J. Schuurmans, and Jeroen Dikken
- Subjects
KOP-Q ,Knowledge ,Attitude ,Older patients ,Geriatrics ,Registered nurses ,Nursing ,RT1-120 - Abstract
Abstract Background Nursing care in hospitals increasingly involves older adults. A nursing workforce able to care for the ageing population is therefore critical for ensuring quality older adult care. Gaining insight in the knowledge and attitudes of nurses regarding older patients in the Netherlands is needed to develop and increase the impact of education- and quality improvement programs which can positively influence nurses’ knowledge and attitudes regarding older patients. Methods A cross-sectional multicenter study was performed. Data was collected in ten tertiary medical teaching hospitals well spread across the Netherlands (89 wards, 2902 nurses). Knowledge levels were measured using the Knowledge about Older Patient-Quiz (KOP-Q), consisting of 30 true-false questions. Knowledge levels of registered nurses are compared with knowledge levels known from literature of first year nursing students; last year nursing students; nurses; and nurse specialist. Potential associated factors considered were: age; sex; education; experience; opinions and preferences. Opinion and preferences regarding working with older patients were measured by three questions: 1) which patient group nurses preferred to work with; 2) how nurses feel about the increase of older patients in the hospital; and 3) whether nurses find it difficult to care for older patients. Results From all wards, a representative sample of 1743 registered hospital nurses working on all 89 wards participated. On all wards, a large range in knowledge levels is observed between nurses, with 37% of nurses presenting knowledge levels comparable with nursing student and 31% of nurses presenting knowledge levels comparable with nurse specialists. Knowledge is related to age (p
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- 2021
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39. Crohn disease-like enterocolitis remission after empagliflozin treatment in a child with glycogen storage disease type Ib: a case report
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Alessandro Rossi, Erasmo Miele, Simona Fecarotta, Maria Veiga-da-Cunha, Massimo Martinelli, Carmine Mollica, Maria D’Armiento, Enza Mozzillo, Pietro Strisciuglio, Terry G. J. Derks, Annamaria Staiano, and Giancarlo Parenti
- Subjects
Glycogen storage disease type Ib ,Inflammatory bowel disease ,Neutropenia ,1,5-anhydroglucitol ,Empagliflozin ,Continuous glucose monitoring ,Pediatrics ,RJ1-570 - Abstract
Abstract Background Besides major clinical/biochemical features, neutropenia and inflammatory bowel disease (IBD) constitute common complications of Glycogen storage disease type Ib (GSD Ib). However, their management is still challenging. Although previous reports have shown benefit of empagliflozin administration on neutropenia, no follow-up data on bowel (macro/microscopic) morphology are available. We herein present for the first time longitudinal assessment of bowel morphology in a GSD Ib child suffering from Crohn disease-like enterocolitis treated with empagliflozin. Case presentation A 14-year-old boy with GSD Ib and severe IBD was (off-label) treated with empagliflozin (20 mg/day) after informed oral and written consent was obtained from the patient’s parents. No adverse events were noted. Clinical symptoms and stool frequency improved within the first week of treatment. Pediatric Crohn disease activity index (PCDAI) normalised within the first month of treatment. Abdomen magnetic resonance imaging (MRI) performed 3 months after treatment initiation showed dramatic decrease in disease activity and length. Similar findings were reported on histology at 5.5 months. At 7.5 months hemoglobin levels normalised and fecal calprotectin almost normalised. Improved neutrophil count, metabolic control and quality of life were also noted. G-CSF dose was decreased by 33% and the patient was partly weaned from tube feeding. Conclusions This is the first report presenting extensive gastrointestinal morphology follow-up in a GSD Ib patient receiving empagliflozin. The present case suggests that empagliflozin can be safe and effective in inducing IBD remission in GSD Ib patients and can even postpone surgery. Future studies are required to confirm its effect over time and assess its benefit in various disease stages. The development of an international collaborating networks for systematic data collection is worthy.
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- 2021
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40. A triple-blinded crossover study to evaluate the short-term safety of sweet manioc starch for the treatment of glycogen storage disease type Ia
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Vaneisse C. L. Monteiro, Bibiana M. de Oliveira, Bruna B. dos Santos, Fernanda Sperb-Ludwig, Lilia F. Refosco, Tatiele Nalin, Terry G. J. Derks, Carolina F. Moura de Souza, and Ida V. D. Schwartz
- Subjects
Inborn errors of metabolism ,Hepatic glycogen storage disease ,Treatment strategies ,Cornstarch ,Sweet manioc starch ,Dietary treatment ,Medicine - Abstract
Abstract Background Glycogen storage disease type 1a (GSD Ia) is characterized by severe fasting hypoglycemia. The clinical management includes the administration of uncooked cornstarch (UCCS). Although such a diet approach is effective in achieving euglycemia, its impact on the quality of life of patients should be considered. In vitro analyses suggest a longer release of glucose when using sweet manioc starch (SMS). Methods We compared the efficacy and safety of the administration of SMS and UCCS during a short-fasting challenge in patients with GSD Ia in a randomized, triple-blind, phase I/II, cross-over study. GSD Ia patients aged ≥ 16 years and treated with UCCS were enrolled. Participants were hospitalized for two consecutive nights, receiving UCCS or SMS in each night. After the administration of the starches, glucose, lactate and insulin levels were measured in 1-h interval throughout the hospitalization period. The procedures were interrupted after 10 h of fasting or in a hypoglycemic episode ( 25 kg/m2) participated in the study. The average fasting period was 8.2 ± 2.0 h for SMS and 7.7 ± 2.3 h for UCCS (p = 0.04). SMS maintained euglycemia for a greater period over UCCS. Increased lactate concentrations were detected even in absence of hypoglycemia, not being influenced by the different starches investigated (p = 0.17). No significant difference was found in total cholesterol, HDL, triglycerides and uric acid levels in both arms. None of the patients showed severe adverse events. Conclusions SMS appears to be non-inferior to UCCS in the maintenance of euglycemia, thus emerging as a promising alternative to the treatment of GSD Ia.
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- 2021
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41. Disruptions of Anaerobic Gut Bacteria Are Associated with Stroke and Post-stroke Infection: a Prospective Case–Control Study
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Haak, Bastiaan W., Westendorp, Willeke F., van Engelen, Tjitske S. R., Brands, Xanthe, Brouwer, Matthijs C., Vermeij, Jan-Dirk, Hugenholtz, Floor, Verhoeven, Aswin, Derks, Rico J., Giera, Martin, Nederkoorn, Paul J., de Vos, Willem M., van de Beek, Diederik, and Wiersinga, W. Joost
- Published
- 2021
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42. Development and validation of a deep learning-based method for automatic measurement of uterus, fibroid, and ablated volume in MRI after MR-HIFU treatment of uterine fibroids
- Author
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Trialbureau Beeld, Cancer, Divisie Beeld & Oncologie, Beeldverwerking ISI, Researchgr. Beeldg. Moleculaire Interv., Regenerative Medicine and Stem Cells, Brain, Slotman, Derk J., Bartels, Lambertus W., Nijholt, Ingrid M., Huirne, Judith A.F., Moonen, Chrit T.W., Boomsma, Martijn F., Trialbureau Beeld, Cancer, Divisie Beeld & Oncologie, Beeldverwerking ISI, Researchgr. Beeldg. Moleculaire Interv., Regenerative Medicine and Stem Cells, Brain, Slotman, Derk J., Bartels, Lambertus W., Nijholt, Ingrid M., Huirne, Judith A.F., Moonen, Chrit T.W., and Boomsma, Martijn F.
- Published
- 2024
43. Assessment of the current and emerging criteria for the histopathological classification of lung neuroendocrine tumours in the lungNENomics project
- Author
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Mathian, Drouet, Y., Sexton-Oates, A., Papotti, M. G., Pelosi, G., Vignaud, J. M., Brcic, L., Mansuet-Lupo, A., Damiola, F., Altun, C., Berthet, J. P., Fournier, C. B., Brustugun, O. T., Centonze, G., Chalabreysse, L., de Montpréville, V. T., di Micco, C. M., Fadel, E., Gadot, N., Graziano, P., Hofman, P., Hofman, V., Lacomme, S., Lund-Iversen, M., Mangiante, L., Milione, M., Muscarella, L. A., Perrin, C., Planchard, G., Popper, H., Rousseau, N., Roz, L., Sabella, G., Tabone-Eglinger, S., Voegele, C., Volante, M., Walter, T., Dingemans, A. M., Moonen, L., Speel, E. J., Derks, J., Girard, N., Chen, L., Alcala, N., Fernandez-Cuesta, L., Lantuejoul, S., Foll, M., Mathian, Drouet, Y., Sexton-Oates, A., Papotti, M. G., Pelosi, G., Vignaud, J. M., Brcic, L., Mansuet-Lupo, A., Damiola, F., Altun, C., Berthet, J. P., Fournier, C. B., Brustugun, O. T., Centonze, G., Chalabreysse, L., de Montpréville, V. T., di Micco, C. M., Fadel, E., Gadot, N., Graziano, P., Hofman, P., Hofman, V., Lacomme, S., Lund-Iversen, M., Mangiante, L., Milione, M., Muscarella, L. A., Perrin, C., Planchard, G., Popper, H., Rousseau, N., Roz, L., Sabella, G., Tabone-Eglinger, S., Voegele, C., Volante, M., Walter, T., Dingemans, A. M., Moonen, L., Speel, E. J., Derks, J., Girard, N., Chen, L., Alcala, N., Fernandez-Cuesta, L., Lantuejoul, S., and Foll, M.
- Abstract
Background: Six thoracic pathologists reviewed 259 lung neuroendocrine tumours (LNETs) from the lungNENomics project, with 171 of them having associated survival data. This cohort presents a unique opportunity to assess the strengths and limitations of current World Health Organization (WHO) classification criteria and to evaluate the utility of emerging markers. Patients and methods: Patients were diagnosed based on the 2021 WHO criteria, with atypical carcinoids (ACs) defined by the presence of focal necrosis and/or 2-10 mitoses per 2 mm2. We investigated two markers of tumour proliferation: the Ki-67 index and phospho-histone H3 (PHH3) protein expression, quantified by pathologists and automatically via deep learning. Additionally, an unsupervised deep learning algorithm was trained to uncover previously unnoticed morphological features with diagnostic value. Results: The accuracy in distinguishing typical from ACs is hampered by interobserver variability in mitotic counting and the limitations of morphological criteria in identifying aggressive cases. Our study reveals that different Ki-67 cut-offs can categorise LNETs similarly to current WHO criteria. Counting mitoses in PHH3+ areas does not improve diagnosis, while providing a similar prognostic value to the current criteria. With the advantage of being time efficient, automated assessment of these markers leads to similar conclusions. Lastly, state-of-the-art deep learning modelling does not uncover undisclosed morphological features with diagnostic value. Conclusions: This study suggests that the mitotic criteria can be complemented by manual or automated assessment of Ki-67 or PHH3 protein expression, but these markers do not significantly improve the prognostic value of the current classification, as the AC group remains highly unspecific for aggressive cases. Therefore, we may have exhausted the potential of morphological features in classifying and prognosticating LNETs. Our study suggests
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- 2024
44. The priorities in managing forest disturbances to enhance forest resilience: A comparison of a literature analysis and perceptions of forest professionals
- Author
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Nikinmaa, Laura, de Koning, Johannes H.C., Derks, J., Grabska-Szwagrzyk, Ewa, Konczal, A.A., Grabska-Szwagrzyk, Marcus, Socha, Jarosław, Muys, Bart, Nikinmaa, Laura, de Koning, Johannes H.C., Derks, J., Grabska-Szwagrzyk, Ewa, Konczal, A.A., Grabska-Szwagrzyk, Marcus, Socha, Jarosław, and Muys, Bart
- Abstract
Climate change alters the operational environment of forest management. The need to increase forest resilience and manage forests based on the best available knowledge is urgent. However, it is unclear to what extent scientific knowledge is integrated into practical forest management guidance. To explore how the integration of research works in forest management guidance, we reviewed literature on the effects of forest management measures on disturbance impacts and conducted two rounds of semi-structured interviews. First, we interviewed forest professionals from nine European countries on what they perceive to be the best forest management measures to increase resilience to forest disturbances. Second, we interviewed forest professionals responsible for developing and adapting forest management guidelines in five European countries on the barriers they perceive in integrating research into practice. Both literature review results and interviews were analysed inductively with MAXQDA software coding. We found a discrepancy between forest management measures frequently addressed in scientific literature and those favored by forest professionals. Some measures that forest managers broadly perceive as important for increasing resilience to disturbances are scarcely studied, indicating that the science-practice interphase could benefit from more application relevant research. The lack of relevant information that could facilitate the practical application of measures and the lack of professional capacity were seen by forest professionals to be the main barriers in integrating research findings into forest management. The results showed that there is a need to support the integration of research findings into practice by increasing the capacities for providing forest management guidance.
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- 2024
45. Intravoxel incoherent motion (IVIM)-derived perfusion fraction mapping for the visual evaluation of MR-guided high intensity focused ultrasound (MR-HIFU) ablation of uterine fibroids
- Author
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Trialbureau Beeld, Cancer, Beeldverwerking ISI, Precision Imaging Group, Brain, Circulatory Health, Highfield Research Group, Researchgr. Beeldg. Moleculaire Interv., Regenerative Medicine and Stem Cells, Slotman, Derk J, Bartels, Lambertus W, Nijholt, Ingrid M, Froeling, Martijn, Huirne, Judith A F, Moonen, Chrit T W, Boomsma, Martijn F, Trialbureau Beeld, Cancer, Beeldverwerking ISI, Precision Imaging Group, Brain, Circulatory Health, Highfield Research Group, Researchgr. Beeldg. Moleculaire Interv., Regenerative Medicine and Stem Cells, Slotman, Derk J, Bartels, Lambertus W, Nijholt, Ingrid M, Froeling, Martijn, Huirne, Judith A F, Moonen, Chrit T W, and Boomsma, Martijn F
- Published
- 2024
46. External validation of the RSNA 2020 pulmonary embolism detection challenge winning deep learning algorithm
- Author
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Trialbureau Beeld, Cancer, MS Radiologie, Circulatory Health, Researchgr. Systems Radiology, Infection & Immunity, Regenerative Medicine and Stem Cells, Beeldverwerking ISI, Brain, Langius-Wiffen, Eline, Slotman, Derk J., Groeneveld, Jorik, AC van Osch, Jochen, Nijholt, Ingrid M., de Boer, Erwin, Nijboer-Oosterveld, Jacqueline, Veldhuis, Wouter B., de Jong, Pim A., Boomsma, Martijn F., Trialbureau Beeld, Cancer, MS Radiologie, Circulatory Health, Researchgr. Systems Radiology, Infection & Immunity, Regenerative Medicine and Stem Cells, Beeldverwerking ISI, Brain, Langius-Wiffen, Eline, Slotman, Derk J., Groeneveld, Jorik, AC van Osch, Jochen, Nijholt, Ingrid M., de Boer, Erwin, Nijboer-Oosterveld, Jacqueline, Veldhuis, Wouter B., de Jong, Pim A., and Boomsma, Martijn F.
- Published
- 2024
47. Generating Heterokaryotic Cells via Bacterial Cell-Cell Fusion
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Shraddha Shitut, Meng-Jie Shen, Bart Claushuis, Rico J. E. Derks, Martin Giera, Daniel Rozen, Dennis Claessen, and Alexander Kros
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cell fusion ,wall deficiency ,coiled-coil peptides ,heterokaryon ,cell membranes ,cell wall deficient ,Microbiology ,QR1-502 - Abstract
ABSTRACT Fusion of cells is an important and common biological process that leads to the mixing of cellular contents and the formation of multinuclear cells. Cell fusion occurs when distinct membranes are brought into proximity of one another and merge to become one. Fusion holds promise for biotechnological innovations, for instance, for the discovery of urgently needed new antibiotics. Here, we used antibiotic-producing bacteria that can proliferate without their cell wall as a model to investigate cell-cell fusion. We found that fusion between genetically distinct cells yields heterokaryons that are viable, contain multiple selection markers, and show increased antimicrobial activity. The rate of fusion induced using physical and chemical methods was dependent on membrane fluidity, which is related to lipid composition as a function of cellular age. Finally, by using an innovative system of synthetic membrane-associated lipopeptides, we achieved targeted fusion between distinctly marked cells to further enhance fusion efficiency. These results provide a molecular handle to understand and control cell-cell fusion, which can be used in the future for the discovery of new drugs. IMPORTANCE Cell-cell fusion is instrumental in introducing different sets of genes in the same environment, which subsequently leads to diversity. There is need for new protocols to fuse cells of different types together for biotechnological applications like drug discovery. We present here wall-deficient cells as a platform for the same. We identify the fluidity of the membrane as an important characteristic for the process of fusion. We demonstrate a cell-specific approach for fusion using synthetically designed peptides yielding cells with modified antibiotic production profiles. Overall, wall-deficient cells can be a chassis for innovative metabolite production by providing an alternative method for cell-cell fusion.
- Published
- 2022
- Full Text
- View/download PDF
48. Dynamic Methods for Childhood Hypoglycemia Phenotyping: A Narrative Review
- Author
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Alessandro Rossi, Martijn G. S. Rutten, Theo H. van Dijk, Barbara M. Bakker, Dirk-Jan Reijngoud, Maaike H. Oosterveer, and Terry G. J. Derks
- Subjects
hypoglycemia ,children ,hepatic glycogen storage diseases ,functional tests ,fasting challenge ,continuous glucose monitoring ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Hypoglycemia results from an imbalance between glucose entering the blood compartment and glucose demand, caused by a defect in the mechanisms regulating postprandial glucose homeostasis. Hypoglycemia represents one of the most common metabolic emergencies in childhood, potentially leading to serious neurologic sequelae, including death. Therefore, appropriate investigation of its specific etiology is paramount to provide adequate diagnosis, specific therapy and prevent its recurrence. In the absence of critical samples for biochemical studies, etiological assessment of children with hypoglycemia may include dynamic methods, such as in vivo functional tests, and continuous glucose monitoring. By providing detailed information on actual glucose fluxes in vivo, proof-of-concept studies have illustrated the potential (clinical) application of dynamic stable isotope techniques to define biochemical and clinical phenotypes of inherited metabolic diseases associated with hypoglycemia. According to the textbooks, individuals with glycogen storage disease type I (GSD I) display the most severe hypoglycemia/fasting intolerance. In this review, three dynamic methods are discussed which may be considered during both diagnostic work-up and monitoring of children with hypoglycemia: 1) functional in vivo tests; 2) in vivo metabolic profiling by continuous glucose monitoring (CGM); 3) stable isotope techniques. Future applications and benefits of dynamic methods in children with hypoglycemia are also discussed.
- Published
- 2022
- Full Text
- View/download PDF
49. Combining radiotherapy and focused ultrasound for pain palliation of cancer induced bone pain; a stage I/IIa study according to the IDEAL framework
- Author
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Marcia M.T.J. Bartels, Inez M. Verpalen, Cyril J. Ferrer, Derk J. Slotman, Erik C.J. Phernambucq, Joost J.C. Verhoeff, Wietse S.C. Eppinga, Manon N.G.J.A. Braat, Rolf D. van den Hoed, Miranda van 't Veer-Ten Kate, Erwin de Boer, Harry R. Naber, Ingrid M. Nijholt, Lambertus W. Bartels, Clemens Bos, Chrit T.W. Moonen, Martijn F. Boomsma, and Helena M. Verkooijen
- Subjects
Cancer pain ,Palliative care ,Palliative therapy ,Pain management ,Neoplasm metastasis ,Bone and bones ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Cancer induced bone pain (CIBP) strongly interferes with patient’s quality of life. Currently, the standard of care includes external beam radiotherapy (EBRT), resulting in pain relief in approximately 60% of patients. Magnetic Resonance guided High Intensity Focused Ultrasound (MR-HIFU) is a promising treatment modality for CIBP. Methods: A single arm, R-IDEAL stage I/IIa study was conducted. Patients presenting at the department of radiation oncology with symptomatic bone metastases in the appendicular skeleton, as well as in the sacrum and sternum were eligible for inclusion. All participants underwent EBRT, followed by MR-HIFU within 4 days. Safety and feasibility were assessed, and pain scores were monitored for 4 weeks after completing the combined treatment. Results: Six patients were enrolled. Median age was 67 years, median lesion diameter was 56,5 mm. In all patients it was logistically possible to plan and perform the MR-HIFU treatment within 4 days after EBRT. All patients tolerated the combined procedure well. Pain response was reported by 5 out of 6 patients at 7 days after completion of the combined treatment, and stabilized on 60% at 4 weeks follow up. No treatment related serious adverse events occurred. Conclusion: This is the first study to combine EBRT with MR-HIFU. Our results show that combined EBRT and MR-HIFU in first-line treatment of CIBP is safe and feasible, and is well tolerated by patients. Superiority over standard EBRT, in terms of (time to) pain relief and quality of life need to be evaluated in comparative (randomized) study.
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- 2021
- Full Text
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50. Screening and surveillance of hepatocellular carcinoma by serum des‐gamma‐carboxy prothrombin in patients with glycogen storage disease type Ia.
- Author
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Schreuder, A. B., Overduin, R. J., Peltenburg, N. C., de Boer, L., Bodewes, F. A. J. A., and Derks, T. G. J.
- Published
- 2024
- Full Text
- View/download PDF
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