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Despite previous culture-independent studies highlighting the prevalence of the order Burkholderiales in deep-sea environments, the cultivation and characterization of deep-sea Burkholderiales have been infrequent. A total of 243 deep-sea bacterial strains were isolated from various depths in the Northwest Pacific Ocean, with 33 isolates (13.6%) from a depth of 4000 m classified into Burkholderiales. Herein, we report the isolation and genome characteristics of strain SAORIC-580T, from a depth of 4000 m in the Northwest Pacific Ocean. The strain showed a close phylogenetic relationship with Limnobacter thiooxidans CS-K2T, sharing 99.9% 16S rRNA gene sequence identity. The complete whole-genome sequence of strain SAORIC-580T comprised 3.3 Mbp with a DNA G+C content of 52.5%. Comparative genomic analysis revealed average nucleotide identities between 79.4–85.7% and digital DNA-DNA hybridization values of 19.9–29.5% when compared to other Limnobacter genomes, indicating that the strain represents a novel species within the genus. Genomic analysis revealed unique adaptations to deep-sea conditions, including genes associated with phenol degradation, stress responses, cold adaptation, heavy metal resistance, signal transduction, and carbohydrate metabolism. The SAORIC-580T genome was found to be more abundant in the deep sea than at the surface in the trenches of the Northwest Pacific Ocean, suggesting adaptations to the deep-sea environment. Phenotypic characterization highlighted distinct differences from other Limnobacter species, including variations in growth conditions, enzyme activities, and phenol degradation capabilities. Chemotaxonomic markers of the strain included ubiquinone-10, major fatty acids such as C16:0, C16:1, and C18:1, and major polar lipids including phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol. Based on the polyphasic taxonomic data, it is concluded that strain SAORIC-580T (= KACC 21440T = NBRC 114111T) represents a novel species, for which the name Limnobacter profundi sp. nov. is proposed. [ABSTRACT FROM AUTHOR]

Introduction: A defining aspect of the Intergovernmental Panel on Climate Change (IPCC) assessment reports (AR) is a formal uncertainty language framework that emphasizes higher certainty issues across the reports, especially in the executive summaries and short summaries for policymakers. As a result, potentially significant risks involving understudied components of the climate system are shielded from view. Methods: Here we seek to address this in the latest, sixth assessment report (AR6) for one such component—the deep ocean—by summarizing major uncertainties (based on discussions of low confidence issues or gaps) regarding its role in our changing climate system. The goal is to identify key research priorities to improve IPCC confidence levels in deep ocean systems and facilitate the dissemination of IPCC results regarding potentially high impact deep ocean processes to decision-makers. This will accelerate improvement of global climate projections and aid in informing efforts to mitigate climate change impacts. An analysis of 3,000 pages across the six selected AR6 reports revealed 219 major science gaps related to the deep ocean. These were categorized by climate stressor and nature of impacts. Results: Half of these are biological science gaps, primarily surrounding our understanding of changes in ocean ecosystems, fisheries, and primary productivity. The remaining science gaps are related to uncertainties in the physical (32%) and biogeochemical (15%) ocean states and processes. Model deficiencies are the leading cited cause of low certainty in the physical ocean and ice states, whereas causes of biological uncertainties are most often attributed to limited studies and observations or conflicting results. Discussion: Key areas for coordinated effort within the deep ocean observing and modeling community have emerged, which will improve confidence in the deep ocean state and its ongoing changes for the next assessment report. This list of key "known unknowns" includes meridional overturning circulation, ocean deoxygenation and acidification, primary production, food supply and the ocean carbon cycle, climate change impacts on ocean ecosystems and fisheries, and ocean-based climate interventions. From these findings, we offer recommendations for AR7 to avoid omitting low confidence-high risk changes in the climate system. [ABSTRACT FROM AUTHOR]

Organic-rich whale bones and wood falls occur widely in the deep sea and support diverse faunal communities, contributing to seafloor habitat diversity. Changes in community structure through succession on deep-sea bone/wood substrates are modulated by ecosystem engineers, i.e., bone-eating Osedax annelids, and wood-boring Xylophaga bivalves. Here, we use a comparative experimental approach and Ocean Networks Canada's (ONC) cabled observatory in hypoxic Barkley Canyon to study, at high temporal resolution, colonization and succession on whale-bone, Douglas fir wood, and control carbonate rock over 8.3 mo. Experimental substrates were similar in size and mounted on PVC plates near the seafloor at 890 m depth and monitored by high-definition video camera for 5-min intervals every 6-12 h over a period of 8.3 mo. A broad range of seafloor and sea-surface environmental variables were also monitored at this site over the 8.3 mo to account for environmental variability and food input. Following loss of the high-definition camera, substrates were surveyed approximately annually with lower resolution ROV video for an additional 8.5 y. We find that megafaunal abundances, species diversity, and community structure varied substantially over 8.3 mo on each substrate, with markedly different patterns on whale bones due to the development of extensive white bacterial mats. A combination of seafloor and sea surface variables explained < 35% of bone/wood community variation. Bone-eating Osedax annelids failed to colonize whale bones even after 9.2 years, and boring Xylophaga bivalves colonized the wood at much lower rates than in better oxygenated deep-sea locations. Species diversity on whale-bone and wood substrates appeared to be substantially reduced due to the absence of ecosystem engineers and the low oxygen concentrations. We hypothesize that Osedax/Xylophaga colonization, bone/wood degradation, and bone/wood community development may be limited by oxygen concentrations of 0.22 - 0.33 ml.l on the NE Pacific margin, and that OMZ expansion due to climate change will reduce whale-bone and wood degradation, and the contribution of whale falls and wood falls to beta diversity, on the NE Pacific margin. [ABSTRACT FROM AUTHOR]

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The hadal zone environment, characterized by extreme hydrostatic pressure, low temperatures, and limited food availability, presents substantial survival challenges for deep-sea fish species. In this study, we captured five deepsea fish species (Bathysaurus mollis, Coryphaenoides rudis, Ilyophis sp., I. brunneus and Pseudoliparis swirei) from the Mariana Trench at depths ranging from 2027 to 7125 m, by employing China's “Exploration I and Exploration II”. By combining lipidomic and proteomic analyses, we aimed to explore the genetic basis of adaptive evolution to the hadal zone in fish. The results indicate several key findings: (1) P. swirei (Mariana hadal snailfish, MHS) may enhance energy storage and utilization during prolonged fasting periods by significantly increasing liver tissue levels of cholesterol ester (CE), ether-linked triacylglycerol (TG-O), coenzyme Q (CoQ), and ATPase content; (2) MHS could maintain membrane fluidity under high pressure by increasing the proportion of unsaturated fatty acids while reducing levels of cholesterol and phosphatidylethanolamine (PE) content. (3) The regulation of lipid types and ratios could increase the risk of lipid peroxidation. To counter oxidative stress, MHS likely elevates monounsaturated fatty acid content and enhances antioxidants such as transferrin and heat shock proteins. Overall, this study provides new insights into the adaptive mechanisms of MHS to deep-sea conditions through the lipidome and proteome analyses, thus broadening our understanding of its resilience in the hadal zone. [ABSTRACT FROM AUTHOR]

The constellation fish, Valenciennellus tripunctulatus, is a small mesopelagic teleost typically found in equatorial and temperate waters worldwide, although the species has been also rarely recorded in the Mediterranean Sea (less than 20 specimens from the available literature since 1918). The Mediterranean records have been documented for the Strait of Messina, the southern Tyrrhenian Sea, the Ligurian Sea and the Adriatic Sea. The present paper offers an updated review on the occurrence of V. tripunctulatus in the Mediterranean basin and provides data on three new specimens, collected in the Strait of Messina between April 2010 and March 2024. Furthermore, we also report information from two individuals found in March 1992 and February 2017, respectively. Overall, the standard length of these specimens ranged from 24.1 to 28.2 mm, whereas weight varied from 0.18 g to 0.20 g. Morphometric and meristic data were reported, and this analysis revealed few differences between examined individuals in the number of PV (ventral series anterior to pelvic fin base) and AC (from anal fin origin to caudal fin base) photophore series. The relationship between total length and standard length (SL = 0.75 × TL + 2.98), total length and head length (HL = 0.17 × TL + 1.47) and standard length and head length (HL = 0.23 × SL + 0.88) showed high correlation values. Considering the lack of data on this species in the Mediterranean, updating morphometric, meristic, biological, ecological and distribution information is very important for taxonomic purposes and useful in understanding the characteristics of the regional population and eventual differences between Mediterranean stock(s) and those from other oceanic areas. [ABSTRACT FROM AUTHOR]

During a survey of marine biodiversity in the deep sea off northeastern Guam, two marine desmoscolecid nematodes belonging to the subgenus Tricoma were discovered. Tricoma (Tricoma) disparseta sp. nov. was described based on specimens collected from sponge and starfish habitats on a seamount at depths ranging from 1300 to 1500 m. Tricoma (Tricoma) disparseta sp. nov. is distinguished by having 59 to 62 main rings, 9 to 10 subdorsal setae, and 14 to 18 subventral setae on each side. Notable features include the differentiation in length and insertion between the subdorsal and subventral setae, as well as the amphid extending to the second or third main ring. Additionally, the spicules have a relatively small capitulum at the proximal end, while the gubernaculum is bent into a hooked shape. The specimen of T. (T.) longirostris observed in this study closely resembles previously reported specimens, characterized by 78 main rings, a long and narrow head shape, eight to nine subdorsal setae, 14 to 15 subventral setae, and a gubernaculum with a knobbed apophysis. Two Tricoma species from the Northwest Pacific Ocean are described in detail, and pictorial keys and comparative tables for species identification are provided for groups with 50 to 64 main rings. [ABSTRACT FROM AUTHOR]

Sciadonus alphacrucis Melo, Gomes, Møller & Nielsen, 2022 is a rare deep‐sea species, previously known from only two specimens collected off São Paulo State, southeastern Brazil, in the western South Atlantic. Herein, we report a new specimen of S. alphacrucis collected on the continental slope off Santa Catarina State, southern Brazil, thereby extending its known distribution by 420 km. Additionally, we provide the new meristic and morphometric data, the molecular identification using sequences of the cytochrome c oxidase subunit I (COI), an updated distribution map, and a discussion of troglomorphic traits. [ABSTRACT FROM AUTHOR]

The deep-sea raphitomid genus Gymnobela Verrill, 1884 (Neogastropoda: Conoidea) has historically been a container for a multitude of raphitomid species, assigned to this genus almost exclusively based on shell characters. Consequently, the genus has become taxonomically inflated. However, a 2021 molecular study redefined Gymnobela and taxonomically revised the genus. Herein, we present an integrative taxonomic study that, mainly based on samples from Australian waters, further defines this problematic genus, as well as the closely related genus Pontiothauma E.A. Smith, 1895. An automatic barcode gap discovery (ABGD) analysis of three mitochondrial genes resulted in six primary species hypotheses (four in Gymnobela and two in Pontiothauma). We recognised morpho-anatomical and bathymetric/geographical characters distinct to all six and found available names for four; we name one new species, Pontiothauma transregnasp. n., but abstain from naming one presumably unnamed Pontiothauma due to a lack of well-preserved adult specimen material. We provide clear synapomorphic characters unique to both Gymnobela and Pontiothauma, notably those of the radula. Furthermore, we present the first evidence supported by molecular data of a transoceanic distribution among the raphitomids, namely in Gymnobela angulosa Sysoev, 1988. Additionally, we recognise non-molecular evidence that might indicate similarly wide distributions in Gymnobela agasizzi (Verrill and Smith, 1880), Gymnobela engonia Verrill, 1884 and Gymnobela frielei Verrill, 1885. Consequently, and to avoid taxonomic splitting, we herein advocate for wide-ranging investigation of worldwide material when conducting taxonomic studies on deep-sea conoideans, due to growing evidence of transoceanic distributions in the group. Finally, through an exhaustive search of worldwide repositories and the literature, and in conjunction with our molecular, morpho-anatomical and bathymetric/geographical data, we have reassigned 16 species from Gymnobela to other genera within the family Raphitomidae. [ABSTRACT FROM AUTHOR]

In the dark, expansive habitat of the deep sea, the production of light through bioluminescence is commonly used among a wide range of taxa. In decapod crustaceans, bioluminescence is only known in shrimps (Dendrobranchiata and Caridea) and may occur in different modes, including luminous secretions that are used to deter predators and/or from specialised light organs called photophores that function by providing camouflage against downwelling light. Photophores exhibit an extensive amount of morphological variation across decapod families: they may be internal (of hepatic origin) or embedded in surface tissues (dermal), and may possess an external lens, suggesting independent origins and multiple functions. Within Dendrobranchiata, we report bioluminescence in Sergestidae, Aristeidae, and Solenoceridae, and speculate that it may also be found in Acetidae, Luciferidae, Sicyonellidae, Benthesicymidae, and Penaeidae. Within Caridea, we report bioluminescence in Acanthephyridae, Oplophoridae, Pandalidae, and new observations for Pasiphaeidae. This comprehensive review includes historic taxonomic literature and recent studies investigating bioluminescence in all midwater and deep benthic shrimp families. Overall, we report known or suspected bioluminescence in 157 species across 12 families of decapod shrimps, increasing previous records of bioluminescent species by 65%. Mounting evidence from personal observations and the literature allow us to speculate the presence of light organs in several families thought to lack bioluminescence, making this phenomenon much more common than previously reported. We provide a detailed discussion of light organ morphology and function within each group and indicate future directions that will contribute to a better understanding of how deep‐sea decapods use the language of light. [ABSTRACT FROM AUTHOR]

Deep‐sea hydrothermal vents are biological hotspots driven by microbial chemosynthetic primary production and characterized by a high proportion of endemic, specially adapted species. Vent communities can be unstable depending on the geological setting, as the underlying geofluid supply may change in location and chemical composition over a decadal timescale. Although the Izu‐Ogasawara Arc in Japan is home to many vent fields within an Ecologically or Biologically Significant Marine Area (EBSA), no observations of decadal changes have been conducted. On Mokuyo Seamount, venting was first confirmed by several submersible dives between 1990 and 1993, but only fragmentary information has been published on its biodiversity. Here, we revisited Mokuyo on two dives between 2021 and 2024, three decades after its discovery. We found changes in venting activities, with the fluid supply on the northern caldera wall almost completely waned, while the northeastern face of the central cone has become increasingly active. The northwestern ridge of the central cone was covered in a dense white plume, under which xenophyophores (giant protists) thrive. The first comprehensive faunal sampling at Mokuyo greatly updated the faunal list from three to 18 species. Our results suggest vent communities on the Izu‐Ogasawara Arc shift on a decadal scale, providing key baseline data for future conservation planning of the EBSA. [ABSTRACT FROM AUTHOR]

Background: In ecosystems influenced by strong seasonal variation in insolation, the fitness of diverse taxa depends on seasonal movements to track resources along latitudinal or elevational gradients. Deep pelagic ecosystems, where sunlight is extremely limited, represent Earth's largest habitable space and yet ecosystem phenology and effective animal movement strategies in these systems are little understood. Sperm whales (Physeter macrocephalus) provide a valuable acoustic window into this world: the echolocation clicks they produce while foraging in the deep sea are the loudest known biological sounds on Earth and convey detailed information about their behavior. Methods: We analyze seven years of continuous passive acoustic observations from the Central California Current System, using automated methods to identify both presence and demographic information from sperm whale echolocation clicks. By integrating empirical results with individual-level movement simulations, we test hypotheses about the movement strategies underlying sperm whales' long-distance movements in the Northeast Pacific. Results: We detect foraging sperm whales of all demographic groups year-round in the Central California Current System, but also identify significant seasonality in frequency of presence. Among several previously hypothesized movement strategies for this population, empirical acoustic observations most closely match simulated results from a population undertaking a "seasonal resource-tracking migration", in which individuals move to track moderate seasonal-latitudinal variation in resource availability. Discussion: Our findings provide evidence for seasonal movements in this cryptic top predator of the deep sea. We posit that these seasonal movements are likely driven by tracking of deep-sea resources, based on several lines of evidence: (1) seasonal-latitudinal patterns in foraging sperm whale detection across the Northeast Pacific; (2) lack of demographic variation in seasonality of presence; and (3) the match between simulations of seasonal resource-tracking migration and empirical results. We show that sperm whales likely track oceanographic seasonality in a manner similar to many surface ocean predators, but with dampened seasonal-latitudinal movement patterns. These findings shed light on the drivers of sperm whales' long-distance movements and the shrouded phenology of the deep-sea ecosystems in which they forage. [ABSTRACT FROM AUTHOR]

Managing deep-sea mining is challenging due to limited data on species and habitat distribution, hindering decision-making. In less-explored polymetallic nodule sites in the Indian Ocean, management approaches are deemed unfeasible due to a substantial lack of data. In this study, we aim to bridge the knowledge gap through a detailed analysis of the macrobenthos (fauna > 300 µm) obtained with two sampling gears (multi- and box corer) in potential impact, preservation, and reference zones in the Central Indian Ocean Basin. In total, 337 individuals were categorized into 106 morphospecies and 18 higher taxa. The lowest abundance was reported in the box corer. Nematodes and copepods dominated the macrobenthos community, whereas polychaetes and tanaidaceans were the more prevalent macrofaunal taxa. Carbohydrates and total organic carbon showed a notable positive correlation with polychaetes, isopods, and bivalves, indicating their influence on larger-sized taxa. Various functional traits, i.e., less motile, discretely motile, biodiffusors, and upward/downward conveyers, were dominant in the study area. The comparative analysis of multi- and box corer sampling reveals distinct patterns in macrobenthic diversity, emphasizing the importance of employing both gears for accurate functional analysis. The paper underscores the significance of including large meiofaunal taxa in macrofauna analyses for assessing deep-sea ecosystem functioning and services. Additionally, the findings contribute significantly to environmental baseline and impact assessment, a crucial aspect of sustainable management in a highly promising polymetallic nodule mining area, aligning with the goals of exploring. [ABSTRACT FROM AUTHOR]

Studies on dinoflagellate cysts in the Arabian Sea (AS) are limited to the coastal waters, but no information from the deeper depths. The dinoflagellate cyst assemblages in surface sediment samples (0–2 cm) from the deeper depths (up to ~ 4500 m) of central (oxygen minimum zone (OMZ)) and southeastern (oligotrophic) AS revealed that the relatively good numbers of cyst concentrations reach deeper depths of OMZ (3505 m) and oligotrophic (4368 m) regions, but the former harbored more cyst concentrations than the latter. The cyst concentration and species count (including HAB species) recorded here are lower compared to the eastern (EAS) and western (WAS) AS, but the autotrophic cyst dominance (74–83%) at deeper depths is in contrast with the heterotrophic dominance in coastal AS. Of the recorded 41 cyst species (belonging to 18 genera), four species (cyst of Cladopyxis sp., Operculodinium janduchenei, Stelladinium bifurcatum, and Protoperidinium monospinum) from the deepest part of oligotrophic AS form the first report. In contrast, Spiniferites and Lingulodinium cysts were common occurrences. Taxonomic comparison with literature revealed (i) the prevalence of more cosmopolitan species (32 species) which could be due to the prevalence of large and small-scale lateral transport of cysts in oligotrophic regions followed by OMZ and coastal regions, respectively, and (ii) very few region-specific species, i.e., cyst of Protoperidinium latissimum, Lejeunecysta sabrina, cyst of Protoperidinium denticulatum in EAS and Impagidinium patulum, and I. strialatum, in WAS. Interestingly, variability in the morphometry was evident between the coastal and open oceans in some cosmopolitan cysts, e.g., Operculodinium centrocarpum and Lingulodinium machaerophorum. These findings from the less studied pelagic regions will contribute to the growing knowledge of dinoflagellate cyst distribution patterns and highlight the significance of cyst taxa and morphology as potential ecological indicators for AS. [ABSTRACT FROM AUTHOR]

Most deep-ocean life relies on organic carbon from the surface ocean. While settling primary production rapidly attenuates in the water column, pulses of organic material can be quickly transported to depth in the form of food falls. One example of fresh material that can reach great depths across the tropical Atlantic Ocean and Caribbean Sea is the pelagic macroalgae Sargassum. However, little is known about the deep-ocean organisms able to use this food source. Here, we encountered the isopod Bathyopsurus nybelini at depths 5002–6288 m in the Puerto Rico Trench and Mid-Cayman Spreading Center using the Deep Submergence Vehicle Alvin. In most of the 32 observations, the isopods carried fronds of Sargassum. Through an integrative suite of morphological, DNA sequencing, and microbiological approaches, we show that this species is adapted to feed on Sargassum by using a specialized swimming stroke, having serrated and grinding mouthparts, and containing a gut microbiome that provides a dietary contribution through the degradation of macroalgal polysaccharides and fixing nitrogen. The isopod's physiological, morphological, and ecological adaptations demonstrate that vertical deposition of Sargassum is a direct trophic link between the surface and deep ocean and that some deep-sea organisms are poised to use this material. [ABSTRACT FROM AUTHOR]

Accelerating rate of human impact and environmental change severely affects marine biodiversity and increases the urgency to implement the Convention on Biological Diversity (CBD) 30×30 plan for conserving 30% of sea areas by 2030. However, area‐based conservation targets are complex to identify in a 3‐dimensional (3D) ocean where deep‐sea features such as seamounts have been seldom studied mostly due to challenging methodologies to implement at great depths. Yet, the use of emerging technologies, such as environmental DNA combined with modern modeling frameworks, could help address the problem. We collected environmental DNA, echosounder acoustic, and video data at 15 seamounts and deep island slopes across the Coral Sea. We modeled 7 fish community metrics and the abundances of 45 individual species and molecular operational taxonomic units (MOTUs) in benthic and pelagic waters (down to 600‐m deep) with boosted regression trees and generalized joint attribute models to describe biodiversity on seamounts and deep slopes and identify 3D protection solutions for achieving the CBD area target in New Caledonia (1.4 million km2). We prioritized the identified conservation units in a 3D space, based on various biodiversity targets, to meet the goal of protecting at least 30% of the spatial domain, with a focus on areas with high biodiversity. The relationship between biodiversity protection targets and the spatial area protected by the solution was linear. The scenario protecting 30% of each biodiversity metric preserved almost 30% of the considered spatial domain and accounted for the 3D distribution of biodiversity. Our study paves the way for the use of combined data collection methodologies to improve biodiversity estimates in 3D structured marine environments for the selection of conservation areas and for the use of biodiversity targets to achieve area‐based international targets. [ABSTRACT FROM AUTHOR]

The scalloped hammerhead shark (Sphyrna lewini), a critically endangered species with a decreasing global population, is characterised by its occurrence in large schools. Such schools are still observed today in the Pacific Ocean, but this is generally not the case in the Atlantic Ocean, and in the Cayman Islands not since the 1970s. Here we report a recent record of a school of S. lewini in deep water off Grand Cayman, and describe a recent, concomitant increase in numbers of the species, and its critically endangered congener, the great hammerhead (Sphyrna mokarran), around the Cayman Islands. Relative population trends and seasonal patterns were assessed using data from shallow and deep-water BRUVS, scientific longlining, citizen science projects including the Sharklogger Network and REEF, and social media reports. It appears that S. lewini may be slowly re-occupying the area, selecting and using deeper waters to school, while S. mokarran has also become less scarce than hitherto. [ABSTRACT FROM AUTHOR]

Deep‐pelagic fishes are among the most abundant vertebrates on Earth. They play a critical role in sequestering carbon, providing prey for harvestable fishing stocks and linking oceanic layers and trophic levels. However, knowledge of these fishes is scarce and fragmented, hampering the ability of both the scientific community and stakeholders to address them effectively. While modelling approaches incorporating these organisms have advanced, they often oversimplify their functional and ecological diversity, potentially leading to misconceptions. To address these gaps, this synthesis examines the biodiversity and ecology of global deep‐pelagic fishes. We review pelagic ecosystem classifications and propose a new semantic framework for deep‐pelagic fishes. We evaluate different sampling methods, detailing their strengths, limitations and complementarities. We provide an assessment of the world's deep‐pelagic fishes comprising 1554 species, highlighting major groups and discussing regional variability. By describing their morphological, behavioural and ecological diversity, we show that these organisms are far from homogeneous. Building on this, we call for a more realistic approach to the ecology of deep‐pelagic fishes transitioning between very different ecological niches during diel vertical migrations. To facilitate this, we introduce the concept of 'diel‐modulated realised niche' and propose a conceptual model synthesising the multiple drivers responsible for such transitions. [ABSTRACT FROM AUTHOR]

Deep-sea corals are rarely identified to species due to a lack of taxonomic expertise and paucity of sampling. Herein we describe a new genus from the family Keratoisididae collected from the Northeast Atlantic. Using both nuclear (2010 conserved element loci) and complete mitogenome phylogenies, we found this genus to be closely related to the genera Dokidisis and Jasonisis. In the nuclear phylogeny, each genus occupied a distinct well-supported clade. All three genera lack thorned- or double-star sclerites in the pharynx; instead they have flattened rods, a potential unifying feature of the keratoisidid group J3 of Watling et al. (2022). The newly described genus Explorisis gen. nov. has a unique sclerome including spindles and tapered rods that differentiates it from its sister genera. Explorisis katharina sp. nov. is characterised by volcano to cylindrical shaped polyps, striated rods and spindles in the polyp body, and elongated flattened rods in the coenenchyme, whereas Explorisis poppyae sp. nov. has heavily granulated spindles and rods in both the polyp body and coenenchyme. Genetic variation within the mitogenomes across both Explorisis gen. nov. species is limited with mutations in just 3 of 14 protein coding regions. ZooBank: Deep-sea corals are often not identified to species rank due to a lack of taxonomic expertise. Bamboo corals are an exclusively deep sea and prolific group of corals found in every ocean basin. In this study, we describe a new genus and two new species of bamboo coral from the Northeast Atlantic. By analysing both their morphology and DNA, we determined that this newly identified genus, named Explorisis, is closely related to the genera Dokidisis and Jasonisis. (Image credit: Declan Morrissey.) [ABSTRACT FROM AUTHOR]

In this study, we conduct a morphological integrative analysis, using traditional techniques and micro-computed tomography imaging, on Septibranchia species. Specimens deposited in malacological collections and samples collected aboard the research vessels Puerto Deseado and Austral off Mar del Plata (~36°S), San Jorge Gulf (~46°), and Marine Protected Area Namuncurá/Burdwood Bank area (~54°S), at depths ranging from 200 to 3000 m, are the subjects of this study. Seven species were identified, including Cardiomya cleryana (d'Orbigny, 1846), Cardiomya knudseni (Allen & Morgan, 1981), Lyonsiella cf. fragilis Allen & Turner, 1974, and Cetoconcha spinulosa (Thiele, 1912), previously found in the study area. Cardiomya fragilissima (E. A. Smith, 1885), an Antarctic/sub-Antarctic species, extends its distribution up to 36°S. Two new species, Cetoconcha gigas sp. nov. and Lyonsiella tentaculata sp. nov. are described. A lectotype is designated for Pholadomya adelaidis Hedley, 1916 and a neotype for Sphenia cleryana d'Orbigny, 1846. A detailed description of the morphological characters of each species and genus, along with insights into their geographical and bathymetric distribution, are provided. The micro-computed tomography analysis of Cardiomya cleryana , Cardiomya fragilissima , and Cetoconcha spinulosa contributed to a detailed anatomical inspection and revealed the presence of muscle bundles associated with the anterior portion of the visceral mass in the scanned specimens. [ABSTRACT FROM AUTHOR]

Four new species of the scaleless black dragonfish genus Eustomias are described based on specimens collected during the ABRACOS (Acoustics along the BRAzilian COaSt) expeditions along the Fernando de Noronha Ridge, off northeastern Brazil, western tropical Atlantic. Eustomias (Haploclonus) antea sp. nov. differs from its congeners by having a long chin barbel without appendages, ending in a very small terminal bulb without terminal filaments. Eustomias (Haploclonus) lucenae sp. nov. has the lowest count of photophores in the lateral series (56) and a simple, short barbel, ending in a small and asymmetrical terminal bulb. Eustomias (Nominostomias) ophioglossa sp. nov. differs from its congeners by the long chin barbel with two terminal bulbs and long terminal filament with bifurcated axis along its length and with bulblets of different sizes and arrangements inside. Eustomias (Nominostomias) bertrandi sp. nov. can be distinguished by the long chin barbel with two terminal bulbs, the distal bulb more than twice as long as the proximal one, and a short terminal filament. Morphological description of a specimen identified as Eustomias (Dinematochirus) cf. minimus is provided, and an overview of the species of Eustomias reported in Brazilian waters is presented and discussed. [ABSTRACT FROM AUTHOR]

During two expeditions to the seamounts in the Yap-Caroline area of the Western Pacific, a new genus, Phoxirostus gen. nov., in the family Laphystiopsidae Stebbing, 1899, is erected for two new species, P. longicarpus sp. nov. (type species) and P. yapensis sp. nov. The new genus can be distinguished from the other three laphystiopsid genera by the acute rostrum not overreaching the distal end of the first peduncular article of antenna 1, the outer plate of maxilla 1 bearing 10–11 spines, and the elongated carpus of pereopods 3–7 being distinctly longer than half the length of the propodus. Phoxirostus longicarpus sp. nov. differs from P. yapensis sp. nov. by the shape of the eyes and coxa 4, the presence of posterodistal protrusions on pleonite 1, and the number of posterodistal protrusions on pleonite 2. Generic analysis of one mitochondrial (COI) and one nuclear (H3) gene using maximum likelihood and Bayesian inference clarified the phylogenetic position of the Laphystiopsidae within the superfamily Iphimedioidea Boeck, 1871. [ABSTRACT FROM AUTHOR]

The complete mitochondrial genome of Paragorgia papillata Li et al. 2021, a deep-sea gorgonian inhabiting at 858 m in Caroline Ridge, was obtained in this study. The length of the mitochondrial genome is 19,018 bp with 14 protein coding genes, one transfer RNA (tRNA-Met) and two ribosomal RNA genes contained in this circular molecule. Phylogenetic analysis indicated that P. papillata and P. coralloides Bayer, 1993 were two closely related species, and a total of 26 mutational sites (four nonsynonymous mutations included) can be detected between their mitochondrial genomes. This exhibits a case that mitochondrial genomes can be applied to differentiate closely related species in gorgonians. The phylogenetic tree constructed with mitochondrial genomes showed that the families in Octocorallia are reciprocally monophyletic, provided that the family names were revised according to the systematic revision of Octocorallia guided by phylogenomics. However, the relationships of the families within each order were different between the previous phylogenomic work and ours. Integrating mitochondrial genomes from a wider array of Octocorallia families is essential for a more accurate comparison of phylogenies derived from nuclear and mitochondrial sequences in future study. [ABSTRACT FROM AUTHOR]

The complete mitochondrial genome of Leptychaster arcticus, deep-sea inhabited asteroid, was examined in this study. The complete mitogenome of L. arcticus is 16,253 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. No gene rearrangements or deletions were observed in compared to other Paxillosida. The ND4L and ND3 genes have 'ATT' as its start codon, which is a feature that has been found in previous echinoderm mitochondrial studies. In the ML tree analysis based on the superorder Valvatacea, it was difficult to establish the molecular phylogenetic relationship at lower taxonomic levels, such as order and family, due to the lack of asteroid molecular data available. Therefore, we expect to contribute to the expansion of the data and determine the phylogenetic positioning in future studies. [ABSTRACT FROM AUTHOR]

The implosion of underwater composite structures is a critical and complex engineering problem, necessitating high-strength, lightweight, and corrosion-resistant materials for deep-sea applications. This manuscript reviews the intricate failure mechanisms of composite structures, focusing on cylindrical structures under extreme underwater conditions. The recent Titan submersible implosion serves as a case study, highlighting the significance of rigorous design considerations. Key topics include material degradation, buckling instability, and material failure, with a detailed analysis of composite layup optimization and manufacturing processes such as filament winding and roll wrapping. The manuscript underscores the need for comprehensive testing, advanced simulation techniques, and monitoring system integration to ensure the safety and effectiveness of composite pressure hulls. Future research should focus on developing more accurate failure models, optimizing manufacturing processes, and enhancing material properties through innovations in composite science to realize the full potential of composite materials in deep-sea applications. [ABSTRACT FROM AUTHOR]

Nitrogen-cycling processes in the deep sea remain understudied. This study investigates the distribution of nitrogen-cycling microbial communities in the deep-sea surface sediments of the western South China Sea, using metagenomic sequencing and real-time fluorescent quantitative PCR techniques to analyze their composition and abundance, and the effects of 11 environmental parameters, including NH4+-N, NO3−-N, NO2−-N, PO43−-P, total nitrogen (TN), total organic carbon (TOC), C/N ratio, pH, electrical conductivity (EC), SO42−, and Cl−. The phylum- and species-level microbial community compositions show that five sites can be grouped as a major cluster, with sites S1 and S9 forming a sub-cluster, and sites S13, S19, and S26 forming the other; whereas sites S3 and S5 constitute a separate cluster. This is also evident for nitrogen-cycling functional genes, where their abundance is influenced by distinct environmental conditions, including water depths (shallower at sites S1 and S9 against deeper at sites S13, S19, and S26) and unique geological features (sites S3 and S5), whereas the vertical distribution of nitrogen-cycling gene abundance generally shows a decreasing trend against sediment depth. Redundancy analysis (RDA) exploring the correlation between the 11 environmental parameters and microbial communities revealed that the NO2−-N, C/N ratio, and TN significantly affect microbial community composition (p < 0.05). This study assesses the survival strategies of microorganisms within deep-sea surface sediments and their role in the marine nitrogen cycle. [ABSTRACT FROM AUTHOR]

Abstract Land plants, especially those with significant woody biomass, represent the largest source of biomass on Earth, making the biodegradation of lignocellulosic materials critical to understanding the global carbon cycle. Cellulose, a major component of lignocellulose, is notoriously resistant to degradation due to its highly crystalline structure. While the degradation of cellulose by terrestrial microbes has been extensively studied, the mechanisms of cellulose degradation in deep-sea environments remain largely unexplored. The deep-sea ecosystem depends on organic matter, such as cellulose, that is synthesized in terrestrial environments and surface waters and descends to the deep sea. Recent studies suggest that a significant amount of cellulose is likely to reach the deep sea. Here, we present an in-depth study of cellulases from a novel deep-sea γ-proteobacterial strain TOYAMA8, isolated from Toyama Bay, Japan, using Surface Pitting Observation Technology (SPOT), a highly sensitive assay for enzymatic cellulose hydrolysis. The cellulases of strain TOYAMA8 show similarities to those of a previously reported deep-sea cellulolytic microbe, Marinagarivorans cellulosilyticus strain GE09. Genomic and transcriptomic analyses of these strains reveal novel cellulase genes and mechanisms that differ from terrestrial counterparts, shedding light on the unique adaptations of deep-sea microbes to recalcitrant biomass. In particular, these strains produce high-molecular-weight cellulases with unique domain architectures, likely optimized for membrane anchoring, which prevents enzyme diffusion and ensures efficient localized activity. Our findings provide critical insights into the microbial cellulose degradation in the deep sea, highlighting its role in the fate of organic carbon and the potential for biotechnological applications in biorefineries.

Abstract Background In ecosystems influenced by strong seasonal variation in insolation, the fitness of diverse taxa depends on seasonal movements to track resources along latitudinal or elevational gradients. Deep pelagic ecosystems, where sunlight is extremely limited, represent Earth’s largest habitable space and yet ecosystem phenology and effective animal movement strategies in these systems are little understood. Sperm whales (Physeter macrocephalus) provide a valuable acoustic window into this world: the echolocation clicks they produce while foraging in the deep sea are the loudest known biological sounds on Earth and convey detailed information about their behavior. Methods We analyze seven years of continuous passive acoustic observations from the Central California Current System, using automated methods to identify both presence and demographic information from sperm whale echolocation clicks. By integrating empirical results with individual-level movement simulations, we test hypotheses about the movement strategies underlying sperm whales’ long-distance movements in the Northeast Pacific. Results We detect foraging sperm whales of all demographic groups year-round in the Central California Current System, but also identify significant seasonality in frequency of presence. Among several previously hypothesized movement strategies for this population, empirical acoustic observations most closely match simulated results from a population undertaking a “seasonal resource-tracking migration”, in which individuals move to track moderate seasonal-latitudinal variation in resource availability. Discussion Our findings provide evidence for seasonal movements in this cryptic top predator of the deep sea. We posit that these seasonal movements are likely driven by tracking of deep-sea resources, based on several lines of evidence: (1) seasonal-latitudinal patterns in foraging sperm whale detection across the Northeast Pacific; (2) lack of demographic variation in seasonality of presence; and (3) the match between simulations of seasonal resource-tracking migration and empirical results. We show that sperm whales likely track oceanographic seasonality in a manner similar to many surface ocean predators, but with dampened seasonal-latitudinal movement patterns. These findings shed light on the drivers of sperm whales’ long-distance movements and the shrouded phenology of the deep-sea ecosystems in which they forage.

The complete mitochondrial genome of Leptychaster arcticus, deep-sea inhabited asteroid, was examined in this study. The complete mitogenome of L. arcticus is 16,253 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. No gene rearrangements or deletions were observed in compared to other Paxillosida. The ND4L and ND3 genes have ‘ATT’ as its start codon, which is a feature that has been found in previous echinoderm mitochondrial studies. In the ML tree analysis based on the superorder Valvatacea, it was difficult to establish the molecular phylogenetic relationship at lower taxonomic levels, such as order and family, due to the lack of asteroid molecular data available. Therefore, we expect to contribute to the expansion of the data and determine the phylogenetic positioning in future studies.

The complete mitochondrial genome of Paragorgia papillata Li et al. 2021, a deep-sea gorgonian inhabiting at 858 m in Caroline Ridge, was obtained in this study. The length of the mitochondrial genome is 19,018 bp with 14 protein coding genes, one transfer RNA (tRNA-Met) and two ribosomal RNA genes contained in this circular molecule. Phylogenetic analysis indicated that P. papillata and P. coralloides Bayer, 1993 were two closely related species, and a total of 26 mutational sites (four nonsynonymous mutations included) can be detected between their mitochondrial genomes. This exhibits a case that mitochondrial genomes can be applied to differentiate closely related species in gorgonians. The phylogenetic tree constructed with mitochondrial genomes showed that the families in Octocorallia are reciprocally monophyletic, provided that the family names were revised according to the systematic revision of Octocorallia guided by phylogenomics. However, the relationships of the families within each order were different between the previous phylogenomic work and ours. Integrating mitochondrial genomes from a wider array of Octocorallia families is essential for a more accurate comparison of phylogenies derived from nuclear and mitochondrial sequences in future study.

In order to improve the stability and stealth of vector propulsion motors in deep-sea exploration, a control method of deep-sea vector propulsion motors based on the position-sensorless and variable carrier frequency was derived from surface-mounted permanent magnet synchronous motors by using periodic spread spectrum modulation technology and position-sensorless control technology of improved sliding mode observer. Through simulations of motors’ variable carrier frequency, motor start-up speed variation, and sudden load change, the control effects of the proposed method were analyzed. The simulation results show that the rotation speed estimation of the studied control method is accurate, and the method has good dynamic tracking performance for rotation speed. The estimation error rate at the rated rotation speed is only 0.32%, and the estimation error rate at 0.5 times the rated rotation speed is only 0.09%. In addition, the proposed control method has an obvious high frequency harmonic spread spectrum suppression effect and good dynamic anti-interference performance. Combined with the simplification effect of reducing the motor structure brought by the position sensor, the control method proposed in this paper can effectively lower the failure rate of the deep-sea vector propulsion motor during operation, reduce the high-order fixed frequency harmonics that are easy to be detected, improve the reliability and stealth of the deep-sea vector propulsion motor, and provide efficient and reliable power guarantee for deep-sea unmanned undersea vehicles.

Morphologically diverse trace fossils belonging to different ichnogenera share similar characteristics in that their producers: 1) sequester organic-rich sediment from the seafloor, or from suspension when plenty of benthic food is available; 2) transfer it downward; 3) stow it in a burrow; and 4) utilize it later during times when benthic food availability is restricted. Organic matter delivery to the seafloor is subject to pronounced seasonal fluctuations. Storage is optimal if the cache is located in anoxic sediment and beyond the reach of competing burrowers. Since the most reactive (i.e., nutritional) organic substances become oxidized first, refractory organic matter is enriched deeper in the substrate. If, however, reactive organic matter is brought in contact with refractory organic matter, priming may take place. Priming refers to enhanced microbial remineralization of refractory organic matter, typically up to 30%. This process is especially efficient where fresh organic matter is transferred into anoxic deposits. In addition, if an open burrow is produced within anoxic sediment, microbial activity is stimulated by the steep geochemical gradient between anoxic host sediment and oxygenated water in the lumen. The microbes and/or their metabolic products may also serve as food source. Consequently, stowing behaviour is an efficient nutritional and survival strategy for animals living in settings that experience strongly fluctuating delivery of benthic food, by conserving food resources during times of plenty to be used when starving. [ABSTRACT FROM AUTHOR]

The Event‐based Vision Sensor (EVS) is a bio‐inspired sensor that captures detailed motions of objects, aiming to become the 'eyes' of machines like self‐driving cars. Compared to conventional frame‐based image sensors, the EVS has an extremely fast motion capture equivalent to 10,000‐fps even with standard optical settings, plus high dynamic ranges for brightness and also lower consumption of memory and energy. Here, we developed 22 characteristic features for analysing the motions of aquatic particles from the EVS raw data and tested the applicability of the EVS in analysing plankton behaviour. Laboratory cultures of six species of zooplankton and phytoplankton were observed, confirming species‐specific motion periodicities up to 41 Hz. We applied machine learning to automatically classify particles into four categories of zooplankton and passive particles, achieving an accuracy up to 86%. At the in situ deployment of the EVS at the bottom of Lake Biwa, several particles exhibiting distinct cumulative trajectory with periodicities in their motion (up to 16 Hz) were identified, suggesting that they were living organisms with rhythmic behaviour. We also used the EVS in the deep sea, observing particles with active motion and periodicities over 40 Hz. Our application of the EVS, especially focusing on its millisecond‐scale temporal resolution and wide dynamic range, provides a new avenue to investigate organismal behaviour characterised by rapid and periodical motions. The EVS will likely be applicable in the near future for the automated monitoring of plankton behaviour by edge computing on autonomous floats, as well as quantifying rapid cellular‐level activities under microscopy. [ABSTRACT FROM AUTHOR]

In the deep-sea environment, the volume available for an in-situ gene sequencer is severely limited. In addition, optical imaging systems are subject to real-time, large-scale defocusing problems caused by ambient temperature fluctuations and vibrational perturbations. To address these challenges, we propose an edge detection algorithm for defocused images based on grayscale gradients and establish a defocus state detection model with nanometer resolution capabilities by relying on the inherent critical illumination light field. The model has been applied to a prototype deep-sea gene sequencing microscope with a 20× objective. It has demonstrated the ability to focus within a dynamic range of ±40 μm with an accuracy of 200 nm by a single iteration within 160 ms. By increasing the number of iterations and exposures, the focusing accuracy can be refined to 78 nm within a dynamic range of ±100 μm within 1.2 s. Notably, unlike conventional photoelectric hill-climbing, this method requires no additional hardware and meets the wide dynamic range, speed, and high-accuracy autofocusing requirements of deep-sea gene sequencing in a compact form factor. [ABSTRACT FROM AUTHOR]

Polyethylene is a plastic pollutant impacting marine life, calling for advanced remediation methods such as biodegradation. However, there is actually limited information on polyethylene-degrading bacteria in the marine environment. Here, we studied bacterial degradation of polyethylene and associated phthalates additives using scanning electron microscopy, Fourier transform infrared, gel permeation chromatography and genomic and transcriptomic techniques. Results show that a deep-sea bacteria, Acinetobacter venetianus F1, can degrade 12.2% of polyethylene after 56 days, following the alkane metabolic pathway. Phthalates were also degraded via the metabolic pathways of benzoic acid and phthalic acid. This is first report of polyethylene-degrading bacteria from deep-sea environments. [ABSTRACT FROM AUTHOR]

TC4 ELI alloy is widely used in the marine, medicine, and aviation fields. The failure performance of TC4 ELI alloy is significantly different from that of other metal materials, such as steels. In this paper, a modified Mohr–Coulomb criterion is calibrated based on several kinds of specimens under different stress states and a 3D geometric representation of a modified Mohr–Coulomb fracture locus for TC4 ELI is obtained based on these parameters. The effectiveness of the modified M-C criterion is studied by a ring-stiffened cylinder made of TC4 ELI. The ultimate strength of the cylinder obtained in the simulation with the modified M-C criterion is close to that obtained in an external pressure experiment, which shows that the modified M-C criterion is suitable for predicting failure in pressure hulls made of titanium alloy used in the deep-sea field. [ABSTRACT FROM AUTHOR]

Increasing array gains is one of the keys to improving underwater targets' detection capabilities. This paper presents a high-gain approach for a vector hydrophone vertical array (VHVA) that combines white noise gain constraint (WNGC) with vector joint processing to preserve strong robustness and provide noticeable gains. Firstly, this approach treats the VHVA as four independent sub-arrays and achieves sub-array supergains by decorrelating noise using WNGC. The beam outputs of the four sub-arrays are then equated to a single-vector hydrophone, the combination gain of which is obtained by leveraging the strong signal correlation and the weak noise correlation between the sound pressure and the particle velocity. Lastly, the sub-array supergain and combination gain are superposed to provide the spatial gain of the VHVA. It is also summarized that low-frequency signals, coherent noise, accurate elevation-angle estimation, and stable phase differences are required for the VHVA to achieve supergain. The simulation and sea trial confirm that this approach can effectively boost the array gain. The maximum spatial gain in the experiment was increased by 9 dB at a range twice the sea's depth while operating at a low frequency. This method shows enormous potential for improving the performance of deep-sea target detection. [ABSTRACT FROM AUTHOR]

Two new neotypes designations are proposed for the species Siboglinum besnardi and Siboglinum nonatoi, based on specimens collected from the Southwestern Atlantic deep waters, type locality of both species. This designation is necessary due to the loss of the original type series for both species. Species identities were validated through morphological analyses, and comprehensive redescriptions are conducted for both species, which not only expand upon the original descriptions but also introduce additional diagnostic characters, including stereomicroscope and SEM images. In addition, genetic material from a specimen of Siboglinum besnardi was obtained, enabling a molecular phylogenetic analysis utilizing COI, 16S and 28S molecular markers. This analysis confirmed not only the species placement within the family Siboglinidae but also provided substantial support for the monophyly of the Frenulata, Vestimentifera, Monilifera and Osedax groups within the annelid family Siboglinidae. [ABSTRACT FROM AUTHOR]

Background: Discoveries of new species often depend on one or a few specimens, leading to delays as researchers wait for additional context, sometimes for decades. There is currently little professional incentive for a single expert to publish a stand-alone species description. Additionally, while many journals accept taxonomic descriptions, even specialist journals expect insights beyond the descriptive work itself. The combination of these factors exacerbates the issue that only a small fraction of marine species are known and new discoveries are described at a slow pace, while they face increasing threats from accelerating global change. To tackle this challenge, this first compilation of Ocean Species Discoveries (OSD) presents a new collaborative framework to accelerate the description and naming of marine invertebrate taxa that can be extended across all phyla. Through a mode of publication that can be speedy, taxonomy-focused and generate higher citation rates, OSD aims to create an attractive home for single species descriptions. This Senckenberg Ocean Species Alliance (SOSA) approach emphasises thorough, but compact species descriptions and diagnoses, with supporting illustrations and with molecular data when available. Even basic species descriptions carry key data for distributions and ecological interactions (e.g., host-parasite relationships) besides universally valid species names; these are essential for downstream uses, such as conservation assessments and communicating biodiversity to the broader public. New information: This paper presents thirteen marine invertebrate taxa, comprising one new genus, eleven new species and one re-description and reinstatement, covering wide taxonomic, geographic, bathymetric and ecological ranges. The taxa addressed herein span three phyla (Mollusca, Arthropoda, Echinodermata), five classes, eight orders and twelve families. Apart from the new genus, an updated generic diagnosis is provided for four other genera. The newly-described species of the phylum Mollusca are Placiphorella methanophila Vončina, sp. nov. (Polyplacophora, Mopaliidae), Lepetodrilus marianae Chen, Watanabe & Tsuda, sp. nov. (Gastropoda, Lepetodrilidae), Shinkailepas gigas Chen, Watanabe & Tsuda, sp. nov. (Gastropoda, Phenacolepadidae) and Lyonsiella illaesa Machado & Sigwart, sp. nov. (Bivalvia, Lyonsiellidae). The new taxa of the phylum Arthropoda are all members of the subphylum Crustacea: Lepechinella naces Lörz & Engel, sp. nov. (Amphipoda, Lepechinellidae), Cuniculomaera grata Tandberg & Jażdżewska, gen. et sp. nov. (Amphipoda, Maeridae), Pseudionella pumulaensis Williams & Landschoff, sp. nov. (Isopoda, Bopyridae), Mastigoniscus minimus Wenz, Knauber & Riehl, sp. nov. (Isopoda, Haploniscidae), Macrostylis papandreas Jonannsen, Riehl & Brandt, sp. nov. (Isopoda, Macrostylidae), Austroniscus indobathyasellus Kaiser, Kniesz & Kihara, sp. nov. (Isopoda, Nannoniscidae) and Apseudopsis daria Esquete & Tato, sp. nov. (Tanaidacea, Apseudidae). In the phylum Echinodermata, the reinstated species is Psychropotes buglossa E. Perrier, 1886 (Holothuroidea, Psychropotidae). The study areas span the North and Central Atlantic Ocean, the Indian Ocean and the North, East and West Pacific Ocean and depths from 5.2 m to 7081 m. Specimens of eleven free-living and one parasite species were collected from habitats ranging from an estuary to deep-sea trenches. The species were illustrated with photographs, line drawings, micro-computed tomography, confocal laser scanning microscopy and scanning electron microscopy images. Molecular data are included for nine species and four species include a molecular diagnosis in addition to their morphological diagnosis. The five new geographic and bathymetric distribution records comprise Lepechinella naces Lörz & Engel, sp. nov., Cuniculomaera grata Tandberg & Jażdżewska, sp. nov., Pseudionella pumulaensis Williams & Landschoff, sp. nov., Austroniscus indobathyasellus Kaiser, Kniesz & Kihara, sp. nov. and Psychropotes buglossa E. Perrier, 1886, with the novelty spanning from the species to the family level. The new parasite record is Pseudionella pumulaensis Williams & Landschoff, sp. nov., found in association with the hermit crab Pagurus fraserorum Landschoff & Komai, 2018. [ABSTRACT FROM AUTHOR]

In many problems of practical importance the interference structure of broadband-signal intensity field in shallow water is determined by the close-to-unity value of the waveguide invariant (WI) β (which is often referred to as the Chuprov invariant). This circumstance is used in ranging, when estimating the distance to the source or its relative velocity. However, the characteristics of the β invariant in deep sea have been studied insufficiently. The WI properties in the near-field acoustic-illumination zone (NFAIZ) of deep sea are investigated below. Its value is shown to be unstable: WI changes in a wide range and actually is not an invariant. Another value—phase–energy invariant (PEI) βef—proved to be more promising in deep sea. In the NFAIZ of deep sea, at real depths of sources and PEI detectors, it is equal to unity with a high accuracy (except for the interference minima zones). It is also found that coherent addition of Fourier components in the complex plane can be implemented in the NFAIZ, provided that a correction to phase variation is introduced when summing spectral densities along ridges. To this end, one must take into account that the Fourier-component phase on a ridge changes almost linearly with an increase or decrease in frequency. In principle, consideration of these characteristics of signals makes it possible to solve more efficiently various applied problems of acoustics. However, to implement this possibility, it is necessary to develop a fairly complex algorithm of signal power accumulation in the frequency–space domain. [ABSTRACT FROM AUTHOR]

Bioturbation is a key ecosystem function with a fundamental role in mediating major biogeochemical cycles. The intensity and depth of bioturbation is influenced by the taxa present, which is often a function of food supply. The deep sea is generally oligotrophic with sediments composed predominantly of small, shallow burrowing macrofauna (<10 cm). Human activity is increasingly introducing POC to the deep-sea, however, organic enrichment of the deep-sea, and the subsequent response of bioturbators is poorly understood. Here we present data on benthic function in deep-sea systems that have experienced organic enrichment. We show that organic enrichment enhances deep-sea bioturbation through larger, advanced successional taxa, and deeper bioturbation depths. Enhanced bioturbation in the deep-sea should confer positive ecosystem functions (nutrient recycling, microbiological activity, remineralization), but adherence to approaches and interpretations guided by the paradigm of small, shallow-burrowing infauna could significantly underestimate deep-sea benthic processes at a global scale. [ABSTRACT FROM AUTHOR]

Mesopelagic fishes hold an important position in marine food webs, serving as a link between lower trophic levels and top predators and transferring energy from their deep mesopelagic habitat to shallower oceanic layers. Despite their ecological importance, research on mesopelagic fishes' diet and feeding habits in the Mediterranean Sea is far from thorough. The present work attempts to assess the preying patterns and diet composition of four myctophid (Benthosema glaciale, Ceratoscopelus maderensis, Myctophum punctatum, Notoscopelus elongatus) and two sternoptychid (Argyropelecus hemigymnus, Maurolicus muelleri) species from the Corinthian Gulf (Ionian Sea, Greece), sampled during pelagic trawl surveys in 2018 and 2019. Stomach vacuity was high for myctophids caught during daytime, a pattern which sternoptychids did not follow. Estimated trophic indices revealed high dietary diversity (Shannon's H' index) for most investigated species, but a narrow trophic niche breadth (Levins' normalized Bn index). Copepods and various marine crustaceans were dominant in all diets, classifying them under the zooplanktivorous trophic guild, while A. hemigymnus exhibited high concentrations of particulate organic matter in their stomachs and N. elongatus exhibited consumption of fish. Diet overlap was significant among most studied mesopelagic species, as indicated by Shoener's S index and confirmed by both the multidimensional scaling ordination and a hierarchical cluster analysis. Information on mesopelagic fishes' diet composition in this poorly studied part of the Mediterranean is useful in further assessing and parameterizing marine food webs and midwater trophic interactions, as well as in quantifying the ensued energy transfer to top predators of commercial interest or conservation concerns. [ABSTRACT FROM AUTHOR]

This study describes Lipogenys hyalinumvelum, a new species of the genus Lipogenys found on the Portuguese coast on the northeastern Atlantic during a crustacean survey. Information on the classification history and known distribution of the genus Lipogenys is provided. Dichotomous keys to the genera of Notacanthidae and the species of Lipogenys, based on morphology, are provided. The specimens were analysed using both morphological and molecular methods, including DNA sequencing of the COI and 16S genes. The distinct genetic characteristics support the recognition of the present specimens as a new species. The hyaline color of the flap at the posterior edge of the operculum is a characteristic that differentiates L. hyalinumvelum from Lipogenys gillii and provides the etymology of the species name. [ABSTRACT FROM AUTHOR]

Modeling and simulating the underwater optical imaging process can assist in optimizing the configuration of underwater optical imaging technology. Based on the Monte Carlo (MC) method, we propose an optical imaging model which is tailored for deep-sea luminescent objects. Employing GPU parallel acceleration expedites the speed of MC simulation and ray-tracing, achieving a three-order-of-magnitude speedup over a CPU-based program. A deep-sea single-lens imaging system is constructed in the model, composed of a luminescent object, water medium, double-convex lens, aperture diaphragm, and sensor. The image of the luminescent object passing through the imaging system is generated using the forward ray-tracing method. This model enables an intuitive analysis of the inherent optical properties of water and imaging device parameters, such as sensor size, lens focal length, field of view (FOV), and camera position on imaging outcomes in the deep-sea environment. [ABSTRACT FROM AUTHOR]

This document provides information on the discovery of a female squid in the deep sea carrying large eggs. The squid was found in the Gulf of California at a depth of 2566m and is believed to be from the Gonatidae family. The size of the eggs is larger than what is typically found in other squid species. The document also discusses the reproductive strategies of squids and the potential advantages of producing large eggs. Overall, this research offers valuable insights into the reproductive biology of deep-sea cephalopods. Additionally, the document explores the development and characteristics of deep-sea cephalopod eggs, with a focus on giant gonatid squid eggs. The stable and predictable environmental conditions in the deep water column allow for fewer, larger eggs and advanced hatchlings. However, the cold waters of the deep sea result in long development times for these eggs. The document also highlights the limited knowledge about the development of large cephalopod eggs at low temperatures and the possibility of extensive multiyear brooding of giant eggs when predation pressure is low. The authors suggest that further exploration of the deep water column is necessary to gain a better understanding of the biology of these mysterious oceanic creatures. [Extracted from the article]

Once considered the most speciose mostly azooxanthellate scleractinian group, the family Caryophylliidae is found to be highly polyphyletic based on molecular data and is undergoing a process of systematic revision. High‐throughput sequencing methods coupled with morphological analyses have facilitated revision of several scleractinian lineages, including the aforementioned family. In previous studies that relied on few mitochondrial and nuclear markers, the caryophylliid genera Stephanocyathus and Vaughanella were phylogenetically recovered in separate clades from the lineage that includes the type genus of the family, Caryophyllia, which is considered the 'true' Caryophylliidae. To help untangle the relationship among taxa of this family, here a new deep‐sea scleractinian family (Stephanocyathidae Vaga, Cairns & Kitahara fam. nov.) is proposed based on phylogenomic reconstructions coupled with molecular features, specifically gene order, of the complete mitochondrial genome. Evolutionary reconstructions were based on both mitochondrial and nuclear ultraconserved elements (UCEs) and exon loci data sets and confirmed the divergent position of the genera Stephanocyathus and Vaughanella. The new family shows a specific gene transposition in the mitochondrial genome, not present in the 'true' caryophylliid lineage, but instead already observed for the species Paraconotrochus antarcticus, recovered as sister taxon of the here proposed new family. Although its phylogenetic position is unknown, the genus Ericiocyathus is also added to the new family, based on macromorphological similarities. This study represents a step forward in our understanding of deep‐sea corals relationships and provide further information (e.g., mitochondrial gene order) that will aid in future efforts of assessing the systematic of caryophylliid lineages. [ABSTRACT FROM AUTHOR]

The deep sea has abundant resources and is regarded as the "sixth continent" that humans can use. Although research on the deep sea has made some progress, its exploration is not deep enough. The acquisition and analysis of deep-sea images can provide important technical means for deep-sea exploration and the acquisition of information. However, there is currently no complete underwater image dataset. For this reason, this paper is the first deep-sea visual dataset of the South China Sea, contains over 100 TB videos and 1 million high quality images. This paper also applies the dataset to underwater image enhancement and image superresolution, and the experiment proves the effectiveness of the dataset. [ABSTRACT FROM AUTHOR]

The hadopelagic environment remains highly understudied due to the inherent difficulties in sampling at these depths. The use of sediment environmental DNA (eDNA) can overcome some of these restrictions as settled and preserved DNA represent an archive of the biological communities. We use sediment eDNA to assess changes in the community within one of the world's most productive open‐ocean ecosystems: the Atacama Trench. The ecosystems around the Atacama Trench have been intensively fished and are affected by climate oscillations, but the understanding of potential impacts on the marine community is limited. We sampled five sites using sediment cores at water depths from 2400 to ~8000 m. The chronologies of the sedimentary record were determined using 210Pbex. Environmental DNA was extracted from core slices and metabarcoding was used to identify the eukaryote community using two separate primer pairs for different sections of the 18S rRNA gene (V9 and V7) effectively targeting pelagic taxa. The reconstructed communities were similar among markers and mainly composed of chordates and members of the Chromista kingdom. Alpha diversity was estimated for all sites in intervals of 15 years (from 1842 to 2018), showing a severe drop in biodiversity from 1970 to 1985 that aligns with one of the strongest known El Niño events and extensive fishing efforts during the time. We find a direct impact of sea surface temperature on the community composition over time. Fish and cnidarian read abundance was examined separately to determine whether fishing had a direct impact, but no direct relation was found. These results demonstrate that sediment eDNA can be a valuable emerging tool providing insight in historical perspectives on ecosystem developments. This study constitutes an important step toward an improved understanding of the importance of environmental and anthropogenic drivers in affecting open and deep ocean communities. [ABSTRACT FROM AUTHOR]