155 results on '"Deeb, Ss"'
Search Results
2. Association between the CC genotype of the hepatic lipase gene promoter, unstable carotid plaque, and cerebrovascular events: the Carotic Athrosclerosis and Restenosis Study (CARS)
- Author
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Zambon, Alberto, Puato, M, Faggin, E, Deeb, Ss, Bertocco, Sandra, Crepaldi, Gaetano, Pessina, Ac, and Pauletto, Paolo
- Published
- 2001
3. A common polymorphism of the hepatic lipase gene as a determinant of LDL particle density and prevalence of macrophages in carotid plaque of patients with cerebrovascular disease
- Author
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Pauletto, Paolo, Faggin, E, Puato, M, Vitturi, Nicola, Deeb, Ss, Bertocco, Sandra, and Zambon, Alberto
- Published
- 2001
4. Intraabdominal fat accounts for a portion of the gender differences in hepatic lipase activity and LDL/HDL heterogeneity
- Author
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Carr, Mc, Zambon, A., Barrett, Ph, Jonathan Purnell, Deeb, Ss, and Brunzell, Jd
- Published
- 2000
5. A common polymorphism in the promoter of the hepatic lipase gene significanlty affect hepatic lipase activity, LDL density and HDL2 cholesterol
- Author
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Zambon, Alberto, Bertocco, Sandra, Meani, A, Deeb, Ss, Brown, Bg, and Brunzell, Jd
- Published
- 2000
6. The molecular basis of variation in human color vision
- Author
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Deeb, SS, primary
- Published
- 2005
- Full Text
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7. Impact of the Peroxisome Proliferator Activated Receptor γ2 Pro12Ala polymorphism on adiposity, lipids and non-insulin-dependent diabetes mellitus
- Author
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Meirhaeghe, A, primary, Fajas, L, additional, Helbecque, N, additional, Cottel, D, additional, Auwerx, J, additional, Deeb, SS, additional, and Amouyel, P, additional
- Published
- 2000
- Full Text
- View/download PDF
8. Molecular basis of familial chylomicronemia: mutations in the lipoprotein lipase and apolipoprotein C-II genes.
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Reina, M, primary, Brunzell, JD, additional, and Deeb, SS, additional
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- 1992
- Full Text
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9. The molecular basis of beta-thalassemia in Lebanon: application to prenatal diagnosis
- Author
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Chehab, FF, Der Kaloustian, V, Khouri, FP, Deeb, SS, and Kan, YW
- Abstract
A study of the molecular lesions of beta-thalassemia in Lebanon revealed the presence of eight different mutations in 25 patients with Cooley's anemia. The IVS1 position 110 mutation predominated with a frequency of 62% and was almost invariably associated with Mediterranean chromosome haplotype I. Five other mutations commonly found in the Mediterranean area occurred with frequencies of 2% to 8%. In addition a G----C substitution in IVS1 position 5 (a lesion previously found in Chinese and Asian Indians) was demonstrated in a patient with Mediterranean haplotype IX. A new mutation at codon 29 was found in two other patients with haplotype II. The characterization of these beta-thalassemia mutations should allow the implementation of a prenatal diagnosis program in that country.
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- 1987
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10. Loss of copper-zinc superoxide dismutase gene expression in differentiated cells of myelo-monocytic origin
- Author
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Auwerx, JH, Chait, A, Wolfbauer, G, and Deeb, SS
- Abstract
Changes in the production of reactive oxygen species and total superoxide dismutase activity have been observed during differentiation of some hematopoietic cells. We therefore investigated whether the steady-state level and rate of transcription of superoxide dismutase-1 (SOD-1) mRNA change during terminal differentiation of the human leukemia cell lines THP-1, HEL, and HL-60 into macrophages and/or granulocytes, respectively. Macrophage differentiation is accompanied by a gradual decrease in both the transcription rate (10x) and the steady-state level (6x) of SOD-1 mRNA. No decrease was observed after treatment with the diacylglycerol analog 1,2 dioctanol-rac-glycerol (di- C8), which like phorbol 12-myristate 13-acetate also activates protein kinase C but does not induce differentiation at the concentration used. The same decrease in SOD-1 mRNA level was observed when HL-60 cells were induced to differentiate into granulocytes by treatment with dimethylsulfoxide. These data suggest that a decrease in SOD-1 mRNA to almost undetectable levels accompanies differentiation of macrophages and granulocytes.
- Published
- 1989
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11. Pathogenic classification of LPL gene variants reported to be associated with LPL deficiency.
- Author
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Rodrigues R, Artieda M, Tejedor D, Martínez A, Konstantinova P, Petry H, Meyer C, Corzo D, Sundgreen C, Klor HU, Gouni-Berthold I, Westphal S, Steinhagen-Thiessen E, Julius U, Winkler K, Stroes E, Vogt A, Hardt P, Prophet H, Otte B, Nordestgaard BG, Deeb SS, and Brunzell JD
- Subjects
- Humans, Hyperlipoproteinemia Type I complications, Hyperlipoproteinemia Type I metabolism, Hypertriglyceridemia complications, Oligonucleotide Array Sequence Analysis, Triglycerides metabolism, Hyperlipoproteinemia Type I enzymology, Hyperlipoproteinemia Type I genetics, Lipoprotein Lipase genetics, Mutation
- Abstract
Background: Lipoprotein lipase (LPL) deficiency is a serious lipid disorder of severe hypertriglyceridemia (SHTG) with chylomicronemia. A large number of variants in the LPL gene have been reported but their influence on LPL activity and SHTG has not been completely analyzed. Gaining insight into the deleterious effect of the mutations is clinically essential., Methods: We used gene sequencing followed by in-vivo/in-vitro and in-silico tools for classification. We classified 125 rare LPL mutations in 33 subjects thought to have LPL deficiency and in 314 subjects selected for very SHTG., Results: Of the 33 patients thought to have LPL deficiency, only 13 were homozygous or compound heterozygous for deleterious mutations in the LPL gene. Among the 314 very SHTG patients, 3 were compound heterozygous for pathogenic mutants. In a third group of 51,467 subjects, from a general population, carriers of common variants, Asp9Asn and Asn291Ser, were associated with mild increase in triglyceride levels (11%-35%)., Conclusion: In total, 39% of patients clinically diagnosed as LPL deficient had 2 deleterious variants. Three patients selected for very SHTG had LPL deficiency. The deleterious mutations associated with LPL deficiency will assist in the diagnosis and selection of patients as candidates for the presently approved LPL gene therapy., (Copyright © 2016 National Lipid Association. Published by Elsevier Inc. All rights reserved.)
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- 2016
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12. Reduced L- and M- and increased S-cone functions in an infant with thyroid hormone resistance due to mutations in the THRβ2 gene.
- Author
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Weiss AH, Kelly JP, Bisset D, and Deeb SS
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- Color Vision Defects metabolism, Cone Opsins genetics, Dark Adaptation, Electroretinography, Exons genetics, Gene Amplification, Humans, Infant, Male, Nystagmus, Congenital, Photic Stimulation, Polymerase Chain Reaction, Rod Opsins genetics, Vision Disorders, Color Vision Defects genetics, Cone Opsins metabolism, Point Mutation, Retinal Cone Photoreceptor Cells metabolism, Rod Opsins metabolism, Thyroid Hormone Receptors beta genetics, Thyroid Hormone Resistance Syndrome genetics
- Abstract
Background: To document an infant with a cone photoreceptor disorder associated with severe thyroid hormone resistance due to compound heterozygosity in the thyroid hormone receptor beta 2 (TRβ2) encoding gene THRβ2., Materials and Methods: Cone photoreceptor function was assessed using standard electroretinography (ERG) including colored flashes. We PCR-amplified and sequenced exons 8-10 of the THRβ2 gene. We cloned and sequenced a genomic segment (exons 9-10) of the THRβ2 gene to confirm a compound heterozygote mutation. We investigated whether mutations in the (OPN1LW-OPN1MW) gene array were responsible for the phenotype., Results: ERG testing showed a normal scotopic response and severely reduced photopic response. Spectral testing showed a small amplitude b-wave to a red flash and a larger amplitude b-wave to the blue flash. Molecular analysis revealed this child was a compound heterozygote for p.R338W and p.R429W mutations in exons 9 and 10 of the THRβ2 gene. These two mutations lie within the ligand-binding domain that is known to selectively inhibit Trβ2 binding as homodimers to the thyroid hormone receptor response elements (TREs). No mutations were found within the OPN1LW and OPN1MW genes or the locus control region that regulates expression of these opsin genes., Conclusion: We document a congenital disorder of cone function characterized by severely reduced L- and M-cone responses and increased S-cone responses caused by deleterious mutations in the THRβ2 gene in thyroid resistant patients. Thyroid hormone, via TRβ2, is critical for determining cone-type differentiation in humans.
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- 2012
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13. The effect of hepatic lipase on coronary artery disease in humans is influenced by the underlying lipoprotein phenotype.
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Brunzell JD, Zambon A, and Deeb SS
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- Animals, Coronary Artery Disease genetics, Genome-Wide Association Study, Humans, Hypercholesterolemia enzymology, Hypertriglyceridemia enzymology, Lipase metabolism, Lipase physiology, Obesity enzymology, Phenotype, Polymorphism, Genetic, Promoter Regions, Genetic, Specific Gravity, Coronary Artery Disease enzymology, Lipase genetics, Lipoproteins metabolism
- Abstract
Increased or decreased hepatic lipase (HL) activity has been associated with coronary artery disease (CAD). This is consistent with the findings that gene variants that influence HL activity were associated with increased CAD risk in some population studies but not in others. In this review, we will explain the conditions that influence the effects of HL on CAD. Increased HL is associated with smaller and denser LDL (sdLDL) and HDL (HDL(3)) particles, while decreased HL is associated with larger and more buoyant LDL and HDL particles. The effect of HL activity on CAD risk is dependent on the underlying lipoprotein phenotype or disorder. Central obesity with hypertriglyceridemia (HTG) is associated with high HL activity that leads to the formation of sdLDL that is pro-atherogenic. In the absence of HTG, where large buoyant cholesteryl ester-enriched LDL is prominent, elevation of HL does not raise the risk for CAD. In HTG patients, drug therapy that decreases HL activity selectively decreases sdLDL particles, an anti-atherogenic effect. Drug therapy that raises HDL(2) cholesterol has not decreased the risk for CAD. In trials where inhibition of cholesterol ester transfer protein (CETP) or HL occurs, the increase in HDL(2) most likely is due to inhibition of catabolism of HDL(2) and impairment of reverse cholesterol transport (RCT). In patients with isolated hypercholesterolemia, but with normal triglyceride levels and big-buoyant LDL particles, an increase in HL activity is beneficial; possibly because it increases RCT. Drugs that lower HL activity might decrease the risk for CAD only in hypertriglyceridemic patients with sdLDL by selectively clearing sdLDL particles from plasma, which would override the potentially pro-atherogenic effect on RCT. This article is part of a Special Issue entitled Advances in High Density Lipoprotein Formation and Metabolism: A Tribute to John F. Oram (1945-2010)., (Copyright © 2011 Elsevier B.V. All rights reserved.)
- Published
- 2012
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14. Epigenetic control of expression of the human L- and M- pigment genes.
- Author
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Deeb SS, Bisset D, and Fu L
- Subjects
- Base Sequence, CCCTC-Binding Factor, CpG Islands, DNA Methylation, Gene Expression Regulation physiology, Humans, Molecular Sequence Data, Repressor Proteins metabolism, Rod Opsins metabolism, Tumor Cells, Cultured, Epigenesis, Genetic genetics, Rod Opsins genetics
- Abstract
Epigenetics alters gene expression by chromatin modification without changing the sequence of DNA. DNA methylation is an essential signal for epigenetic gene regulation. Methylation of cytosine bases at CpG dinucleotides in DNA results in chromatin condensation resulting in suppression of gene expression. DNA methylation has been shown to play important roles in cell differentiation, genomic imprinting and X-chromosome inactivation. We compared the CpG methylation patterns of the promoters of the L-opsin gene (OPN1LW) and the M-opsin gene (OPN1MW), plus a DNase I hypersensitive (DHS) site located about 8 kb (kilobases) upstream of the OPN1LW gene. Comparisons were made using the human retinoblastoma cell line WERI, which expresses the L and M opsin genes when treated with thyroid hormone (T3), and a lymphoblastoid cell line GM06990 that does not express these genes. The results showed that the great majority of the 14 CpGs located within the proximal 200 bp (base pairs) of each promoter, plus 20 bp of the 5'-untranslated region, were hypo-methylated in WERI-Rb-1 cells, whether or not treated with T3, but almost totally methylated in the lymphoblastoid cell line. Three of the CpGs that are located beyond 200 bp from the transcription start site of OPN1LW were hyper-methylated in both WERI and lymphoblastoid cells. Significant differential methylation was also observed within the DHS region (24 CpGs). This DHS region contains a highly conserved motif that binds CCCTC-binding factor (CTCF), referred to as a 'chromatin insulator or boundary element', that has been shown to regulate gene expression at several genome locations. The results suggest that DNA methylation is likely to contribute to regulation of expression of the L- and M-opsin genes during differentiation, as well as to the retinal L:M cone ratio. In addition, thyroid hormone induction of the opsin genes does not appear to alter DNA methylation., (© 2010 The Authors, Ophthalmic and Physiological Optics © 2010 The College of Optometrists.)
- Published
- 2010
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15. The dimensionality of color vision in carriers of anomalous trichromacy.
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Jordan G, Deeb SS, Bosten JM, and Mollon JD
- Subjects
- Adult, Aged, Color Perception Tests, Color Vision Defects physiopathology, Female, Heterozygote, Humans, Male, Middle Aged, Retinal Cone Photoreceptor Cells physiology, Color Perception physiology, Color Vision physiology, Color Vision Defects genetics, Discrimination, Psychological physiology
- Abstract
Some 12% of women are carriers of the mild, X-linked forms of color vision deficiencies called "anomalous trichromacy." Owing to random X chromosome inactivation, their retinae must contain four classes of cone rather than the normal three; and it has previously been speculated that these female carriers might be tetrachromatic, capable of discriminating spectral stimuli that are indistinguishable to the normal trichromat. However, the existing evidence is sparse and inconclusive. Here, we address the question using (a) a forced-choice version of the Rayleigh test, (b) a test using multidimensional scaling to reveal directly the dimensionality of the participants' color space, and (c) molecular genetic analyses to estimate the X-linked cone peak sensitivities of a selected sample of strong candidates for tetrachromacy. Our results suggest that most carriers of color anomaly do not exhibit four-dimensional color vision, and so we believe that anomalous trichromacy is unlikely to be maintained by an advantage to the carriers in discriminating colors. However, 1 of 24 obligate carriers of deuteranomaly exhibited tetrachromatic behavior on all our tests; this participant has three well-separated cone photopigments in the long-wave spectral region in addition to her short-wave cone. We assess the likelihood that behavioral tetrachromacy exists in the human population.
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- 2010
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16. The role of the PGC1α Gly482Ser polymorphism in weight gain due to intensive diabetes therapy.
- Author
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Deeb SS and Brunzell JD
- Abstract
The Diabetes Control and Complications Trial (DCCT) involved intensive diabetes therapy of subjects with type 1 diabetes mellitus (T1DM) for an average period of 6.5 years. A subset of these subjects gained excessive weight. We tested for association of polymorphisms in 8 candidate genes with the above trait. We found the Gly482Ser polymorphism in the peroxisome proliferator-activated receptor γ coactivator-1α (PGC1α) to be significantly associated with weight gain in males (P = .0045) but not in females. The Ser allele was associated with greater weight gain than the Gly allele (P = .005). Subjects with a family history of type 2 diabetes mellitus (T2DM) were more common among those who gained excessive weight. We conclude that T2DM and the Gly482Ser polymorphism in PGC1α contribute to the effect of intensive diabetes therapy on weight gain in males with T1DM.
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- 2009
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17. Energy balance in congenital generalized lipodystrophy type I.
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Taleban S, Carew HT, Dichek HL, Deeb SS, Hollenback D, Weigle DS, Cummings DE, and Brunzell JD
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- 1-Acylglycerol-3-Phosphate O-Acyltransferase genetics, 1-Acylglycerol-3-Phosphate O-Acyltransferase metabolism, Adiponectin blood, Adult, Basal Metabolism, DNA chemistry, DNA genetics, Energy Metabolism, Female, Genotype, Ghrelin blood, Humans, Leptin blood, Linear Models, Lipodystrophy, Congenital Generalized blood, Lipodystrophy, Congenital Generalized genetics, Male, Middle Aged, Polymerase Chain Reaction, Lipodystrophy, Congenital Generalized metabolism
- Abstract
Congenital generalized lipodystrophy type 1 (CGL-1) is characterized by an absence of adipose tissue and decreased serum leptin levels. Low leptin levels in CGL-1 support the claim that subjects are hypermetabolic and hyperphagic. The present study examines this claim. We determined 24-hour energy expenditure (24-h EE) (kilocalories) (n = 2) and resting metabolic rate (RMR) per kilogram of lean body mass (LBM) (n = 3) in CGL-1 and in 18 healthy control subjects. The 24-h EEs of control and subjects with CGL were compared with respect to kilocalories required per day relative to kilograms of LBM and with respect to RMR relative to kilograms of LBM. Fasting leptin, adiponectin, and 24-hour ghrelin levels were also measured in subjects with CGL-1. The 24-h EE per kilogram of LBM for the subjects with CGL-1 falls on the same regression line observed for this relationship in the controls. The RMR per kilogram of LBM in subjects with CGL-1 also was similar to that in controls. Both 24-h EE and RMR were quite increased when reported per kilogram of total body weight. Subjects with CGL-1 also have decreased fasting leptin and adiponectin hormone levels and no premeal ghrelin rise. People with CGL-1 have similar RMR and daily caloric requirements as healthy controls when these parameters are expressed as a function of LBM. Appetite-regulating hormone levels in CGL-1 suggest that multiple factors act to control appetite in these individuals.
- Published
- 2008
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18. A novel method for measuring human lipoprotein lipase and hepatic lipase activities in postheparin plasma.
- Author
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Imamura S, Kobayashi J, Nakajima K, Sakasegawa S, Nohara A, Noguchi T, Kawashiri MA, Inazu A, Deeb SS, Mabuchi H, and Brunzell JD
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- Adult, Child, Preschool, Female, Glycerol, Humans, Lipase metabolism, Lipoprotein Lipase metabolism, Male, Middle Aged, Plasma drug effects, Sodium Chloride, Heparin pharmacology, Lipase blood, Lipoprotein Lipase blood, Plasma enzymology
- Abstract
The objective of this study was to establish a new lipoprotein lipase (LPL) and hepatic lipase (HL) activity assay method. Seventy normal volunteers were recruited. Lipase activities were assayed by measuring the increase in absorbance at 546 nm due to the quinoneine dye. Reaction mixture-1 (R-1) contained dioleoylglycerol solubilized with lauryldimethylaminobetaine, monoacylglycerol-specific lipase, glycerolkinase, glycerol-3-phosphate oxidase, peroxidase, ascorbic acid oxidase, and apolipoprotein C-II (apoC-II). R-2 contained Tris-HCl (pH 8.7) and 4-aminoantipyrine. Automated assay of lipase activities was performed with an automatic clinical analyzer. In the assay for HL + LPL activity, 160 microl R-1 was incubated at 37 degrees C with 2 microl of sample for 5 min, and 80 microl R-2 was added. HL activities were measured under the same conditions without apoC-II. HL and LPL activities were also measured by the conventional isotope method and for HL mass by ELISA. Lipase activity detected in a 1.6 M NaCl-eluted fraction from a heparin-Sepharose column was enhanced by adding purified apoC-II in a dose-dependent manner, whereas that eluted by 0.8 M NaCl was not. Postheparin plasma-LPL and HL activities measured in the present automated method had high correlations with those measured by conventional activity and mass methods. This automated assay method for LPL and HL activities is simple and reliable and can be applied to an automatic clinical analyzer.
- Published
- 2008
- Full Text
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19. Distinguishing L from M photopigment coding sequences by hybridization to novel locked nucleic acid (LNA) oligonucleotide probes.
- Author
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Pettan-Brewer C, Fu L, and Deeb SS
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- Animals, Base Sequence, DNA chemistry, DNA genetics, Humans, Models, Molecular, Molecular Sequence Data, Nucleic Acid Conformation, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Oligonucleotide Probes, Oligonucleotides, Primates, RNA chemistry, RNA genetics, Species Specificity, Retinal Cone Photoreceptor Cells physiology, Retinal Pigments physiology
- Abstract
Many attempts have been made over the years to distinguish human and primate L (long-wavelength sensitive) from M (middle-wavelength sensitive) cone photoreceptors using either immunohistochemistry or in situ hybridization. These attempts have been unsuccessful due to the very high degree of identity between the sequences of the L and M proteins and encoding mRNAs. The recent development of chemically modified oligonucleotide probes, referred to as locked nucleic acid (LNA) probes, has shown that they hybridize with much greater affinity and specificity to the target nucleic acid. This has greatly increased the potential for differentiating L from M cones by in situ hybridization. We have designed LNA oligonucleotide probes that are complementary to either the L or M coding sequences located in exon 5 of the Macaca nemestrina L and M pigment genes. We have shown that the LNA-M and LNA-L probes hybridize specifically to their respective target nucleic acid sequences in vitro. This result strongly suggests that these probes would be instrumental in rapidly distinguishing L from M cone in the entire retina, and in defining the cone mosaic during development and in adults.
- Published
- 2008
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20. Cone visual pigments of monotremes: filling the phylogenetic gap.
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Wakefield MJ, Anderson M, Chang E, Wei KJ, Kaul R, Graves JA, Grützner F, and Deeb SS
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- Animals, DNA Footprinting, Exons, Genome, Genome, Human, Humans, Phylogeny, Platypus classification, Platypus genetics, Tachyglossidae classification, Tachyglossidae genetics, Platypus physiology, Retinal Cone Photoreceptor Cells physiology, Retinal Pigments physiology, Tachyglossidae physiology
- Abstract
We have determined the sequence and genomic organization of the genes encoding the cone visual pigment of the platypus (Ornithorhynchus anatinus) and the echidna (Tachyglossus aculeatus), and inferred their spectral properties and evolutionary pathways. We prepared platypus and echidna retinal RNA and used primers of the middle-wave-sensitive (MWS), long-wave-sensitive (LWS), and short-wave sensitive (SWS1) pigments corresponding to coding sequences that are highly conserved among mammals; to PCR amplify the corresponding pigment sequences. Amplification from the retinal RNA revealed the expression of LWS pigment mRNA that is homologous in sequence and spectral properties to the primate LWS visual pigments. However, we were unable to amplify the mammalian SWS1 pigment from these two species, indicating this gene was lost prior to the echidna-platypus divergence (21 MYA). Subsequently, when the platypus genome sequence became available, we found an LWS pigment gene in a conserved genomic arrangement that resembles the primate pigment, but, surprisingly we found an adjacent (20 kb) SWS2 pigment gene within this conserved genomic arrangement. We obtained the same result after sequencing the echidna genes. The encoded SWS2 pigment is predicted to have a wavelength of maximal absorption of about 440 nm, and is paralogous to SWS pigments typically found in reptiles, birds, and fish but not in mammals. This study suggests the locus control region (LCR) has played an important role in the conservation of photo receptor gene arrays and the control of their spatial and temporal expression in the retina in all mammals. In conclusion, a duplication event of an ancestral cone visual pigment gene, followed by sequence divergence and selection gave rise to the LWS and SWS2 visual pigments. So far, the echidna and platypus are the only mammals that share the gene structure of the LWS-SWS2 pigment gene complex with reptiles, birds and fishes.
- Published
- 2008
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21. Sensitivity of mouse lung fibroblasts heterozygous for GPx4 to oxidative stress.
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Garry MR, Kavanagh TJ, Faustman EM, Sidhu JS, Liao R, Ware C, Vliet PA, and Deeb SS
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- Animals, Cardiolipins metabolism, Cells, Cultured, Glutathione Peroxidase genetics, Heterozygote, Lung cytology, Membrane Potential, Mitochondrial physiology, Mice, Mice, Transgenic, Microscopy, Confocal, Oxidation-Reduction, Phospholipid Hydroperoxide Glutathione Peroxidase, Sulfhydryl Compounds metabolism, Adaptation, Physiological physiology, Fibroblasts metabolism, Glutathione Peroxidase metabolism, Lung metabolism, Oxidative Stress physiology
- Abstract
Phospholipid hydroperoxide glutathione peroxidase (GPx4) is a member of the family of selenium-dependent enzymes that catalyze the reduction of cell membrane-bound phospholipid hydroperoxides in situ and thus protects against membrane damage. Overexpression of GPx4 protects cultured cells from phosphatidylcholine hydroperoxide (PCOOH)-induced loss of mitochondrial membrane potential and blocks cell death induced by treatment with various apoptotic agents. We have generated mice that are heterozygous for a GPx4 null allele (GPx4 +/-); the homozygous null genotype is embryonic lethal. We report that cultured lung fibroblasts (LFs) isolated from adult GPx4 +/- mice had approximately 50% of the GPx4 activity of LFs from GPx4 +/+ mice and were significantly more susceptible to H2O2, cadmium, and cumene hydroperoxide-induced cytotoxicity, as measured by neutral red assay. Both GPx4 +/+ and GPx4 +/- LFs were susceptible to PCOOH-induced cytotoxicity at a high PCOOH concentration. We also found that GPx4 +/- LFs have lower mitochondrial membrane potential, greater cardiolipin oxidation, and lower amounts of reduced thiols relative to GPx4 +/+ LFs, but are more resistant than GPx4 +/+ LFs to further decrements in these endpoints following PCOOH treatment. These results suggest that adult lung fibroblasts deficient in GPx4 may have upregulated compensatory mechanisms to deal with the highly oxidized environment in which they developed.
- Published
- 2008
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22. Identification of novel retinal target genes of thyroid hormone in the human WERI cells by expression microarray analysis.
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Liu Y, Fu L, Chen DG, and Deeb SS
- Subjects
- Dose-Response Relationship, Drug, Down-Regulation drug effects, Down-Regulation physiology, Eye Proteins biosynthesis, Humans, Oligonucleotide Array Sequence Analysis methods, Retina drug effects, Reverse Transcriptase Polymerase Chain Reaction methods, Rod Opsins biosynthesis, Rod Opsins genetics, Transcription, Genetic, Triiodothyronine pharmacology, Tumor Cells, Cultured, Up-Regulation drug effects, Up-Regulation physiology, Eye Proteins genetics, Retina metabolism, Triiodothyronine physiology
- Abstract
Using the human WERI-Rb1 cell line as a model system, we performed a genome-wide search for retinal target genes of thyroid hormone (TH) via expression microarray analysis followed by quantitative real-time RT-PCR verification. We identified 12 novel retinal targets of TH, including 10 up-regulated genes (OPN1MW, OPN1LW, TIMP3, RP1L1, GNGT2, CRX, ARR3, GCAP1, IMPDH1, and PDE6C) and 2 down-regulated genes (GNGT1 and GNB3). In addition, we found a number of novel TH-targets that are not currently known to be retinal genes. This is the first report of human retinal targets regulated by thyroid hormone.
- Published
- 2007
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23. Transcriptional regulation of the human hepatic lipase (LIPC) gene promoter.
- Author
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Rufibach LE, Duncan SA, Battle M, and Deeb SS
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- Animals, Base Sequence, Binding Sites genetics, COS Cells, COUP Transcription Factor II genetics, COUP Transcription Factor II metabolism, Cell Line, Chlorocebus aethiops, DNA genetics, DNA metabolism, Gene Expression Regulation, Enzymologic, Heat-Shock Proteins genetics, Heat-Shock Proteins metabolism, Hepatocyte Nuclear Factor 1-alpha genetics, Hepatocyte Nuclear Factor 1-alpha metabolism, Hepatocyte Nuclear Factor 4 antagonists & inhibitors, Hepatocyte Nuclear Factor 4 deficiency, Hepatocyte Nuclear Factor 4 genetics, Hepatocyte Nuclear Factor 4 metabolism, Humans, Lipase metabolism, Liver enzymology, Mice, Mice, Knockout, Models, Biological, Molecular Sequence Data, Mutagenesis, Site-Directed, Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha, Promoter Regions, Genetic, Receptors, Cytoplasmic and Nuclear metabolism, Recombinant Proteins genetics, Recombinant Proteins metabolism, Transcription Factors genetics, Transcription Factors metabolism, Transcriptional Activation, Transfection, Lipase genetics
- Abstract
Hepatic lipase (HL) plays a key role in the metabolism of plasma lipoproteins, and its level of activity requires tight regulation, given the association of both low and high levels with atherosclerosis and coronary artery disease. However, little is known about the factors responsible for HL expression. Here, we report that the human hepatic lipase gene (LIPC) promoter is regulated by hepatocyte nuclear factor 4alpha (HNF4alpha), peroxisome proliferator-activated receptor gamma coactivator-1alpha (PGC-1alpha), apolipoprotein A-I regulatory protein-1 (ARP-1), and hepatocyte nuclear factor 1alpha (HNF1alpha). Reporter analysis showed that HNF4alpha directly regulates the LIPC promoter via two newly identified direct repeat elements, DR1 and DR4. PGC-1alpha is capable of stimulating the HNF4alpha-dependent transactivation of the LIPC promoter. ARP-1 displaces HNF4alpha from the DR1 site and blocks its ability to activate the LIPC promoter. Induction by HNF1alpha requires the HNF1 binding site and upon cotransfection with HNF4alpha leads to an additive effect. In addition, the in vivo relevance of HNF4alpha in LIPC expression is shown by the ability of the HNF4alpha antagonist Medica 16 to repress endogenous LIPC mRNA expression. Furthermore, disruption of Hnf4alpha in mice prevents the expression of HL mRNA in liver. The overall effect these transcription factors have on HL expression will ultimately depend on the interplay between these various factors and their relative intracellular concentrations.
- Published
- 2006
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24. Genetics of variation in human color vision and the retinal cone mosaic.
- Author
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Deeb SS
- Subjects
- Animals, Color Vision Defects genetics, Humans, Receptors, Cytoplasmic and Nuclear genetics, Receptors, Cytoplasmic and Nuclear metabolism, Retinal Cone Photoreceptor Cells embryology, Color Perception genetics, Genetic Variation genetics, Retinal Cone Photoreceptor Cells cytology, Retinal Cone Photoreceptor Cells metabolism
- Abstract
Variation in human color vision is mainly caused by one common polymorphism (Ser180Ala) in the L pigment, and to the frequent presence of hybrid genes that encode pigments with various spectral properties. Both recombination and gene conversion between the highly homologous L and M pigment genes have generated wide variation in genotype and color vision phenotype. The S, M and L cones are distributed randomly in the central retina. Unlike S cones, M and L cones vary widely in number within the central retina. Determining the number of the three classes of cone and their special distribution in the living retina has significantly advanced the ability to correlate the cone mosaic in normal and color-defective subjects with the color vision phenotype. The transcription factors NR2E3, TRbeta2 and RXRgamma play crucial roles in establishment of the retinal cone mosaic during eye development.
- Published
- 2006
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25. Genetics of apolipoprotein B and apolipoprotein AI and premature coronary artery disease.
- Author
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Zambon A, Brown BG, Deeb SS, and Brunzell JD
- Subjects
- Apolipoprotein A-I blood, Apolipoproteins B blood, Cholesterol, HDL blood, Coronary Artery Disease blood, Dyslipidemias blood, Humans, Hyperlipidemia, Familial Combined blood, Hyperlipidemia, Familial Combined genetics, Hyperlipoproteinemia Type II blood, Hyperlipoproteinemia Type II genetics, Hyperlipoproteinemia Type IV blood, Hyperlipoproteinemia Type IV genetics, Lipoprotein(a) blood, Lipoproteins, LDL blood, Apolipoprotein A-I genetics, Apolipoproteins B genetics, Coronary Artery Disease genetics, Dyslipidemias genetics
- Abstract
Increased low-density lipoprotein (LDL) and decreased high-density lipoprotein cholesterol (HDL-C) predict premature coronary artery disease, as do elevated levels of apolipoprotein B or reduced levels of apolipoprotein AI. Probands were studied of families with common genetic forms of dyslipidaemia to determine if apo B or apo AI define genetic groups and if apo B or apo AI levels relate to premature coronary artery disease risk. Elevated apo B was characteristic of familial hypercholesterolaemia, familial combined hyperlipidaemia (FCHL), and was seen in individuals with elevated Lp(a). Normal apo B levels were seen in familial hypertriglyceridaemia and in 'coronary artery disease with low-HDL cholesterol'. Apo AI levels tended to be low in FCHL and were decreased in 'coronary disease with low-HDL cholesterol'. In familial hypertriglyceraemia, even though HDL-C levels were low, normal apo AI and apo B levels were seen in the absence of premature coronary artery disease. Therefore, in genetic dyslipidaemias elevated apo B levels and reduced apo AI levels (or increased apo B/AI ratio) differ and predict premature coronary artery disease.
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- 2006
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26. Mutually exclusive expression of the L and M pigment genes in the human retinoblastoma cell line WERI: Resetting by cell division.
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Deeb SS, Liu Y, and Hayashi T
- Subjects
- Blotting, Northern methods, Cell Line, Tumor, Female, Humans, Oligonucleotide Array Sequence Analysis methods, RNA, Messenger metabolism, Retinoblastoma genetics, Reverse Transcriptase Polymerase Chain Reaction methods, Cell Division physiology, Gene Expression physiology, Retinal Pigments genetics, Retinoblastoma metabolism
- Abstract
The key steps in the evolution of full trichromatic color vision in primates include duplication of the ancestral pigment gene to form the L and M pigment gene array on the X chromosome, mutually exclusive expression of the L and M pigment genes in cone photoreceptors, and formation of a retinal mosaic with randomly distributed L and M cones. Previous work using transgenic mice has indicated that a locus control region adjacent to this array of genes plays an important role in their mutually exclusive expression in respective cone cells (Smallwood et al., 2002). However, the mechanism by which this is accomplished is unknown. We searched for a cellular model system to investigate the mechanism of this mutually exclusive expression. We previously showed that the undifferentiated human retinoblastoma cell line WERI expresses L and M cone opsin but not rod opsin genes. We now show that WERI cells express the L and M pigment genes in a mutually exclusive manner, in that either L or M pigment mRNA is expressed in a single cell. Importantly, clonal analysis showed that single WERI cells that express either L or M generate, upon cell division produce, a mixed population of L- or M-expressing cells. These results indicate, first, that cell division resets L or M pigment gene expression, most likely due to disassembly and reassembly of LCR-promoter DNA-protein complexes during cell division. Second, a retinal mosaic with near-random distribution of L and M cones may have been generated automatically after duplication of the ancestral gene to form the L and M pigment genes. Third, determination of L and M cone identity may not require external molecular cues during differentiation, and is consistent with the idea that L and M cones are not intrinsically different.
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- 2006
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27. Common hepatic lipase gene promoter variant predicts the degree of neointima formation after carotid endarterectomy: impact of plaque composition and lipoprotein phenotype.
- Author
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Zambon A, Puato M, Faggin E, Bertocco S, Vitturi N, Polentarutti V, Deriu GP, Grego F, Bertipaglia B, Rattazzi M, Vianello D, Deeb SS, and Pauletto P
- Subjects
- Carotid Stenosis diagnostic imaging, Carotid Stenosis surgery, Follow-Up Studies, Humans, Immunohistochemistry, Neovascularization, Pathologic diagnostic imaging, Neovascularization, Pathologic metabolism, Phenotype, Polymerase Chain Reaction, Postoperative Complications, Prognosis, Promoter Regions, Genetic genetics, Ultracentrifugation, Ultrasonography, Carotid Stenosis blood, DNA genetics, Endarterectomy, Carotid adverse effects, Lipase genetics, Lipoproteins genetics, Neovascularization, Pathologic etiology, Polymorphism, Genetic
- Abstract
Background: The common -514 C-T promoter polymorphism of the hepatic lipase gene (LIPC) and the cholesteryl ester transfer protein (CETP) gene TaqIB polymorphism affect atherogenesis. We investigated the potential relationship between these polymorphisms and the maximum-intima-media thickness (M-IMT) after carotid endarterectomy., Methods: The LIPC and CETP genotypes were determined by PCR in 68 patients undergoing endarterectomy. Plaque specimens were analysed for cell composition by immunocytochemistry. Six month after surgery the M-IMT of the revascularized vessel was assessed by B-mode ultrasonography., Results: The CC carriers had denser LDL particles (p<0.0005), an abundance of macrophages (p<0.0005), fewer SMCs in the carotid plaque (p<0.0005), and higher prevalence of cerebrovascular events (72% versus 28%, p=0.002) compared to CT/TT carriers. After endarterectomy, CC carriers showed a lower M-IMT than the CT/TT group (1.36 mm versus 1.76 mm, p=0.04). No association between the CETP polymorphism and either carotid plaque cellular composition or M-IMT was observed. In a multivariate analysis, M-IMT was associated with plaque cell composition (macrophages, r=-0.39; SMC, r=0.44; p<0.005 for both) but not with pre-operative LDL-C, HDL-C, triglycerides, or LDL density., Conclusions: The LIPC promoter -514 C-T polymorphism is associated with a significantly reduced development of neointima after surgery. This effect seems to be mediated by scarcity of SMC in the plaque of CC carriers who display an excess prevalence of cerebrovascular events prior endarterectomy but are at low risk for restenosis. The pre-operative lipid phenotype plays a marginal role in the neointima formation.
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- 2006
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28. Expression of rinx/vsx1 during postnatal eye development in cone-bipolar, differentiating ganglion, and lens fiber cells.
- Author
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Hayashi T, Huang J, and Deeb SS
- Subjects
- Amino Acid Sequence, Animals, Cell Differentiation, Cloning, Molecular, Eye Proteins chemistry, Eye Proteins genetics, Homeodomain Proteins chemistry, Homeodomain Proteins genetics, Immunoblotting, Immunoenzyme Techniques, In Situ Hybridization, Lens, Crystalline cytology, Mice, Mice, Inbred C57BL, Molecular Sequence Data, Neuroglia metabolism, RNA, Messenger metabolism, Rabbits, Retinal Ganglion Cells cytology, Reverse Transcriptase Polymerase Chain Reaction, Eye growth & development, Eye Proteins metabolism, Homeodomain Proteins metabolism, Interneurons metabolism, Lens, Crystalline metabolism, Retinal Cone Photoreceptor Cells metabolism, Retinal Ganglion Cells metabolism
- Abstract
Purpose: To investigate the expression pattern of the homeobox transcription factor Rinx (also referred to as Vsx1) during postnatal eye development of the mouse., Methods: We cloned the mouse Rinx gene, inferred the sequence of the encoded protein, and prepared polyclonal antibodies against it. Immunohistochemical analysis (IHC) and in situ hybridization were employed to localize Rinx in postnatal and adult mouse eyes. Double-labeled IHC either with anti-protein kinase C (PKC, a marker of rod bipolar cells) or anti-vimentin (a marker of Muller glial cells) antibodies was performed in the adult retina. Rinx mRNA was also analyzed by reverse transcription-polymerase chain reaction in the lens., Results: At P0 and P4 (postnatal days), Rinx-immunoreactive cells included retinal ganglion cells (RGC), cells of the innermost nuclear layer (INL) and of presumptive INL, differentiating lens fiber cells, and a few cells of the presumptive outer nuclear layer (ONL). At P8, both Rinx protein and mRNA were detected in the middle of the INL, and in RGC, but not in the lens. When the mice were 8 weeks of age, only a subset of nuclei in the outer half of the INL expressed both Rinx protein and mRNA. Double-labeling IHC indicated that Rinx- and either PKC- or vimentin-labeled cells were not colocalized. Therefore, Rinx is most likely expressed in adult cone bipolar cells and possibly in horizontal cells., Conclusions: Rinx may play important roles in the differentiation and maintenance of cone bipolar cells. Rinx is unique among members of this family of homeodomain proteins in that it may also be involved in differentiation of RGC and lens fiber cells.
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- 2005
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29. Apolipoprotein L-I is positively associated with hyperglycemia and plasma triglycerides in CAD patients with low HDL.
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Albert TS, Duchateau PN, Deeb SS, Pullinger CR, Cho MH, Heilbron DC, Malloy MJ, Kane JP, and Brown BG
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- Aged, Antioxidants pharmacology, Apolipoprotein L1, Apolipoproteins drug effects, Apolipoproteins genetics, Cross-Sectional Studies, Female, Genetic Variation, Genotype, Humans, Lipoproteins, HDL drug effects, Lipoproteins, HDL genetics, Male, Middle Aged, Placebos, Regression Analysis, Apolipoproteins blood, Coronary Disease blood, Hyperglycemia blood, Lipoproteins, HDL blood, Triglycerides blood
- Abstract
Apolipoprotein L-I (apoL-I) is present on a subset of HDL particles and is positively correlated with plasma triglycerides (TGs). We measured plasma apoL-I levels in coronary artery disease (CAD) subjects with low HDL who were enrolled in an angiographic CAD prevention trial. At baseline, apoL-I levels (n = 136; range, 2.2-64.1 mug/ml) were right skewed with a large degree of variability. Multivariate analysis for biological determinants of apoL-I revealed that the log of VLDL-TG (+0.17; P < 0.05) and hyperglycemia (HG; +0.26; P < 0.005) independently predicted apoL-I level. Hyperglycemic patients (n = 24) had mean apoL-I levels >50% higher than normoglycemic subjects (n = 112; 13.2 vs. 8.3 mug/ml, respectively; P < 0.001). No relationship between apoL-I level and change in CAD was found (r = 0.06, P = 0.49). Simvastatin-niacin therapy did not alter apoL-I levels (n = 34; P = 0.27), whereas antioxidant vitamins alone increased apoL-I by >50% (n = 36; P < 0.01). Genotyping of a known apoL-I polymorphism (Lys166Glu) did not independently account for any of the variability in apoL-I levels. In conclusion, we found TG and HG to be the strongest predictors of apoL-I within a dyslipidemic CAD population. These data provide further characterization of the novel HDL-associated apoL-I.
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- 2005
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30. Molecular genetics of colour vision deficiencies.
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Deeb SS
- Subjects
- Humans, Pedigree, Color Vision Defects genetics, Molecular Biology
- Abstract
Common variation in colour vision exists among both colour normal and colour deficient subjects. Differences at a few amino acid positions that influence the spectra of the L and M cone pigments account for most of this variation. The genes encoding the L and M photopigments are arranged in head-to-tail arrays on the X-chromosome, beginning with the L and followed by one or more M pigment genes. The L and M pigment genes are highly homologous, which predisposed them to unequal crossing over (recombination) resulting in gene deletions and in formation of L/M hybrid genes that encode a variety of pigments with either L-like or M-like spectra that account for the majority of colour vision defects. Only the first two pigment genes of the L/M array are expressed in the retina and, therefore, need to be considered in predicting colour vision. A common single amino acid polymorphism (serine or alanine) at position 180 of the L-pigment plays an important role both in variation in normal colour vision and in the severity of colour vision defects. Blue cone monochromacy is a rare form of colour vision deficiency that results from mutations that abolish function of both the L and M pigment genes. All the above defects are inherited as X-linked recessive traits. Tritanopia is also a rare autosomal dominant colour vision defect caused by mutations in the S pigment gene located on chromosome 7. Total colour blindness (achromatopsia or rod monochromacy) is a rare autosomal recessive trait caused by mutations in genes encoding the proteins of the photoreceptor cation channel or cone transducin that are essential for function of all classes of cone.
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- 2004
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31. X-linked high myopia associated with cone dysfunction.
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Young TL, Deeb SS, Ronan SM, Dewan AT, Alvear AB, Scavello GS, Paluru PC, Brott MS, Hayashi T, Holleschau AM, Benegas N, Schwartz M, Atwood LD, Oetting WS, Rosenberg T, Motulsky AG, and King RA
- Subjects
- Adolescent, Adult, Age of Onset, Blotting, Southern, Child, Child, Preschool, Chromosome Mapping, Color Perception Tests, Color Vision Defects physiopathology, DNA Mutational Analysis, Electroretinography, Female, Genetic Linkage, Genotype, Haplotypes, Humans, Male, Myopia physiopathology, Pedigree, Polymerase Chain Reaction, Retinal Cone Photoreceptor Cells physiology, Rod Opsins, Color Vision Defects genetics, Eye Proteins genetics, Genetic Diseases, X-Linked genetics, Myopia genetics, Retinal Cone Photoreceptor Cells chemistry
- Abstract
Objective: Bornholm eye disease (BED) consists of X-linked high myopia, high cylinder, optic nerve hypoplasia, reduced electroretinographic flicker with abnormal photopic responses, and deuteranopia. The disease maps to chromosome Xq28 and is the first designated high-grade myopia locus (MYP1). We studied a second family from Minnesota with a similar X-linked phenotype, also of Danish descent. All affected males had protanopia instead of deuteranopia., Methods: X chromosome genotyping, fine-point mapping, and haplotype analysis of the DNA from 22 Minnesota family individuals (8 affected males and 5 carrier females) and 6 members of the original family with BED were performed. Haplotype comparisons and mutation screening of the red-green cone pigment gene array were performed on DNA from both kindreds., Results: Significant maximum logarithm of odds scores of 3.38 and 3.11 at theta = 0.0 were obtained with polymorphic microsatellite markers DXS8106 and DXYS154, respectively, in the Minnesota family. Haplotype analysis defined an interval of 34.4 cM at chromosome Xq27.3-Xq28. Affected males had a red-green pigment hybrid gene consistent with protanopia. We genotyped Xq27-28 polymorphic markers of the family with BED, and narrowed the critical interval to 6.8 cM. The haplotypes of the affected individuals were different from those of the Minnesota pedigree. Bornholm eye disease-affected individuals showed the presence of a green-red hybrid gene consistent with deuteranopia., Conclusions: Because of the close geographic origin of the 2 families, we expected affected individuals to have the same haplotype in the vicinity of the same mutation. Mapping studies, however, suggested independent mutations of the same gene. The red-green and green-red hybrid genes are common X-linked color vision defects, and thus are unrelated to the high myopia and other eye abnormalities in these 2 families., Clinical Relevance: X-linked high myopia with possible cone dysfunction has been mapped to chromosome Xq28 with intervals of 34.4 and 6.8 centimorgan for 2 families of Danish origin.
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- 2004
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32. Cone visual pigments of the Australian marsupials, the stripe-faced and fat-tailed dunnarts: sequence and inferred spectral properties.
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Strachan J, Chang LY, Wakefield MJ, Graves JA, and Deeb SS
- Subjects
- Amino Acid Sequence, Animals, Australia, Base Sequence, DNA Primers, Introns, Marsupialia classification, Molecular Sequence Data, Phylogeny, Marsupialia genetics, Retinal Cone Photoreceptor Cells physiology, Retinal Pigments genetics, Rod Opsins genetics
- Abstract
Studies of color vision in marsupial mammals have been very limited. Two photoreceptor genes have been characterized from the tammar wallaby, but a third cone pigment was suggested by microspectrophotometric measurements on cone photoreceptors in two other species, including the fat-tailed dunnart, Sminthopsis crassicaudata. To determine the sequence and infer absorption maxima of the cone photoreceptor pigments of S. crassicaudata and the related stripe-faced dunnart (Sminthopsis macroura), we have used evolutionarily conserved sequences of the cone pigments of other species, including the tammar wallaby, to design primers to amplify the S. macroura and S. crassicaudata pigment sequences by the polymerase chain reaction (PCR) using genomic DNA or retinal cDNA as a template. These primers will be useful for amplifying cone opsin coding sequences from a variety of vertebrates. Amplified products were directly sequenced to determine gene structure and coding sequences. The inferred amino acid sequences of the cone visual pigments indicated that both species have middle-wave-sensitive (MWS) pigments with a predicted absorption maximum (lambda(max)) at 530 nm, and ultraviolet-sensitive (UVS) pigments with a predicted lambda(max) at 360 nm. The MWS pigments of the two species differ by two, and UVS by three amino acid positions. No evidence was obtained for a third cone pigment in either species.
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- 2004
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33. Ethnic differences in hepatic lipase and HDL in Japanese, black, and white Americans: role of central obesity and LIPC polymorphisms.
- Author
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Carr MC, Brunzell JD, and Deeb SS
- Subjects
- Ethnicity genetics, Female, Gene Frequency genetics, HLA Antigens genetics, Humans, Japan ethnology, Lipase blood, Lipase metabolism, Lipids blood, Liver enzymology, Male, Sex Characteristics, Black or African American, Asian People genetics, Black People genetics, Lipase genetics, Lipoproteins, HDL blood, Obesity genetics, Polymorphism, Genetic genetics, White People genetics
- Abstract
Hepatic lipase activity (HLA) is a determinant of HDL levels, and a polymorphism in the hepatic lipase gene (LIPC) promoter (C-514T) has been hypothesized to account for higher HDL in blacks and Japanese compared with whites. To determine whether the polymorphism contributes to ethnic differences in HDL, we compared LIPC allele frequencies and HLA in Japanese American (JA; n = 84), black American (BA; n = 94), and white American (WA; n = 110) men and women. The LIPC polymorphism was associated with HLA in all cohorts (BA, P = 0.012; JA, P = 0.008; WA, P = 0.009). WA men had 49% and 58% higher HLA than BA and JA men, respectively (both P < 0.05), yet no differences in HLA were found between the women. The higher HLA in the WA men remained after adjustment for the LIPC polymorphism's effect on HLA (P = 0.037) but was erased after adjustment for waist-to-hip-ratio (P = 0.46). Although the WA men had lower HDL and HDL(3) than the JA and BA men (all P < 0.05), there were no differences in HDL(2), implying that variance in HLA may not underlie the ethnic differences in HDL levels. These results suggest that 1) the LIPC promoter polymorphism contributes to variation in HLA and HDL(2) in the three ethnic groups; 2) WA men had higher HLA than BA and JA men, related to ethnic differences in central adiposity but not LIPC allele frequency; and 3) the higher HLA in WA men did not contribute to the ethnic differences in HDL, as the differences in HDL were made up entirely of differences in HDL(3) and not HDL(2).
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- 2004
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34. Analysis of the human hexokinase II promoter in vivo: lack of insulin response within 4.0 kb.
- Author
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Pirinen E, Heikkinen S, Malkki M, Deeb SS, Jänne J, and Laakso M
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- Animals, Base Pairing genetics, Genes, Reporter, Glucose pharmacology, Hexokinase biosynthesis, Hexokinase chemistry, Hindlimb, Humans, Luciferases biosynthesis, Luciferases genetics, Mice, Mice, Transgenic, Muscle, Skeletal metabolism, Promoter Regions, Genetic drug effects, RNA, Messenger analysis, Hexokinase genetics, Insulin pharmacology, Promoter Regions, Genetic physiology
- Abstract
To locate regulatory element(s) that mediate(s) the effect of insulin on hexokinase II (HKII) gene transcription, we have generated several transgenic mouse lines harboring 97, 254, 505, 819 or 4077 bp of the proximal promoter of the human HKII gene driving the expression of a luciferase reporter gene. Luciferase activities indicate that major promoter elements responsible for the basal activity and tissue-specificity of the human HKII gene expression are located within the 505-bp segment of the promoter. To induce the promoter constructs by endogenous insulin released from the pancreatic beta-cells, transgenic mice were given repeated intraperitoneal injections of D-glucose. Significant induction of luciferase activity was not observed in any of the transgenic mouse lines even though the endogenous HKII mRNA was induced 2.7-fold upon treatment. Thus, our results suggest a lack of insulin response in the 4.0-kb region of the proximal promoter of the human HKII gene in mice.
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- 2004
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35. Evidence of linkage of HDL level variation to APOC3 in two samples with different ascertainment.
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Gagnon F, Jarvik GP, Motulsky AG, Deeb SS, Brunzell JD, and Wijsman EM
- Subjects
- Bayes Theorem, Cholesterol, HDL blood, Pedigree, Quantitative Trait Loci, Apolipoproteins C genetics, Cholesterol, HDL genetics, Genetic Linkage
- Abstract
The APOA1-C3-A4-A5 gene complex encodes genes whose products are implicated in the metabolism of HDL and/or triglycerides. Although the relationship between polymorphisms in this gene cluster and dyslipidemias was first reported more than 15 years ago, association and linkage results have remained inconclusive. This is due, in part, to the oligogenic and multivariate nature of dyslipidemic phenotypes. Therefore, we investigate evidence of linkage of APOC3 and HDL using two samples of dyslipidemic pedigrees: familial combined hyperlipidemia (FCHL) and isolated low-HDL (ILHDL). We used a strategy that deals with several difficulties inherent in the study of complex traits: by using a Bayesian Markov Chain Monte Carlo (MCMC) approach we allow for oligogenic trait models, as well as simultaneous incorporation of covariates, in the context of multipoint analysis. By using this approach on extended pedigrees we provide evidence of linkage of APOC3 and HDL level variation in two samples with different ascertainment. In addition to APOC3, we estimate that two to three genes, each with a substantial effect on total variance, are responsible for HDL variation in both data sets. We also provide evidence, using the FCHL data set, for a pleiotropic effect between HDL, HDL3 and triglycerides at the APOC3 locus.
- Published
- 2003
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36. The cone visual pigments of an Australian marsupial, the tammar wallaby (Macropus eugenii): sequence, spectral tuning, and evolution.
- Author
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Deeb SS, Wakefield MJ, Tada T, Marotte L, Yokoyama S, and Marshall Graves JA
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Humans, Macropodidae physiology, Molecular Sequence Data, Rats, Retinal Cone Photoreceptor Cells chemistry, Retinal Pigments chemistry, Retinal Pigments physiology, Rod Opsins chemistry, Rod Opsins genetics, Rod Opsins physiology, Sequence Analysis, DNA, Sequence Homology, Spectrophotometry, Evolution, Molecular, Macropodidae genetics, Retinal Cone Photoreceptor Cells physiology, Retinal Pigments genetics
- Abstract
Studies on marsupial color vision have been limited to very few species. There is evidence from behavioral, electroretinographic (ERG), and microspectrophotometric (MSP) measurements for the existence of both dichromatic and trichromatic color vision. No studies have yet investigated the molecular mechanisms of spectral tuning in the visual pigments of marsupials. Our study is the first to determine the mRNA sequence, infer the amino acid sequence, and determine, by in vitro expression, the spectra of the cone opsins of a marsupial, the tammar wallaby (Macropus eugenii). This yielded some information on mechanisms and evolution of spectral tuning of these pigments. The tammar wallaby retina contains only short-wavelength sensitive (SWS) and middle-wavelength sensitive (MWS) pigment mRNAs. This predicts dichromatic color vision, which is consistent with conclusions from previous behavioral studies ( Hemmi 1999). We found that the wallaby has a SWS1 class pigment of 346 amino acids. Sequence comparison with eutherian SWS pigments predicts that this SWS1 pigment absorbs maximally (lambdamax) at 424 nm and, therefore, is a blue rather than a UV pigment. This (lambdamax) is close to that of the in vitro-expressed wallaby SWS pigment (lambdamax of 420 +/- 2 nm) and to that determined behaviorally (420 nm). The difference from the mouse UV pigment (lambdamax of 359 nm) is largely accounted for by the F86Y substitution, in agreement with in vitro results comparing a variety of other SWS pigments. This suggests that spectral tuning employing F86Y substitution most likely arose independently in the marsupials and ungulates as a result of convergent evolution. An apparently different mechanism of spectral tuning of the SWS1 pigments, involving five amino acid positions, evolved in primates. The wallaby MWS pigment has 363 amino acids. Species comparisons at positions critical to spectral tuning predict a lambdamax near 530 nm, which is close to that of the in vitro-expressed pigment (529 +/- 1 nm), but quite different from the value of 539 nm determined by microspectrophotometry. Introns interrupt the coding sequences of the wallaby, mouse, and human MWS pigment sequences at the same corresponding nucleotide positions. However, the length of introns varies widely among these species.
- Published
- 2003
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37. Hepatic lipase and dyslipidemia: interactions among genetic variants, obesity, gender, and diet.
- Author
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Deeb SS, Zambon A, Carr MC, Ayyobi AF, and Brunzell JD
- Subjects
- Diabetes Mellitus, Type 2 genetics, Diet, Female, Genetic Variation, Haplotypes, Humans, Hyperlipidemia, Familial Combined genetics, Hyperlipidemias enzymology, Lipoproteins, LDL metabolism, Male, Models, Biological, Obesity genetics, Obesity metabolism, Polymorphism, Genetic, Promoter Regions, Genetic, Sex Factors, Hyperlipidemias genetics, Lipase genetics, Lipase physiology, Liver enzymology
- Abstract
Hepatic lipase (HL) plays a central role in LDL and HDL remodeling. High HL activity is associated with small, dense LDL particles and with reduced HDL2 cholesterol levels. HL activity is determined by an HL gene promoter polymorphism, by gender (lower in premenopausal women), and by visceral obesity with insulin resistance. The activity is affected by dietary fat intake and selected medications. There is evidence for an interaction of the HL promoter polymorphism with visceral obesity, dietary fat intake, and with lipid-lowering medications in determining the level of HL activity. The dyslipidemia with high HL activity is a potentially proatherogenic lipoprotein profile in the metabolic syndrome, in Type 2 diabetes, and in familial combined hyperlipidemia.
- Published
- 2003
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38. Köbberling type of familial partial lipodystrophy: an underrecognized syndrome.
- Author
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Herbst KL, Tannock LR, Deeb SS, Purnell JQ, Brunzell JD, and Chait A
- Subjects
- Anthropometry, Body Composition, Exons, Female, Humans, Lamin Type A genetics, Leptin blood, Lipodystrophy genetics, Obesity genetics, Receptors, Cytoplasmic and Nuclear genetics, Skinfold Thickness, Syndrome, Transcription Factors genetics, Washington, White People, Lipodystrophy diagnosis, Obesity complications
- Abstract
Objective: The phenotypic expression of partial lipodystrophy is present in two familial syndromes: familial partial lipodystrophy type 1 (FPLD1), with fat loss from the extremities, and central obesity and FPLD type 2, with fat loss from the extremities, abdomen, and thorax. The latter disorder is associated with mutations in the LMNA gene. FPLD1 is thought to be rare. Here, we report 13 subjects with FPLD1, suggesting that this syndrome is more common than previously thought., Research Design and Methods: Fasting glucose, plasma lipids, leptin, HbA(1c), and anthropomorphic measurements were evaluated in 13 subjects with clinical features of FPLD1 and are compared with two age-matched control groups, with and without diabetes., Results: Only women with clinical features of FPLD1 have been identified. Although they lack extremity and gluteal subcutaneous fat, they do have truncal obesity. Skinfold thickness on the arm and leg was significantly less than that in control subjects. The ratio of skinfold thickness from abdomen to thigh was significantly higher in subjects, suggesting an easy method for identifying affected patients. FPLD1 subjects also had components of the metabolic syndrome, including hypertension, insulin resistance, and severe hypertriglyceridemia resulting in pancreatitis. Premature coronary artery disease was present in 31% of subjects. None of the subjects had coding mutations in the LMNA gene or in the gene coding for peroxisome proliferator-activated receptor (PPAR)-gamma., Conclusions: FPLD1 is more common than previously described, but the diagnosis is often missed. Early recognition and intensive treatment of hyperlipidemia and diabetes in FPLD1 is important for prevention of pancreatitis and early cardiovascular disease.
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- 2003
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39. Hepatic lipase: a marker for cardiovascular disease risk and response to therapy.
- Author
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Zambon A, Deeb SS, Pauletto P, Crepaldi G, and Brunzell JD
- Subjects
- Animals, Genetic Predisposition to Disease, Humans, Polymorphism, Genetic, Risk Factors, Cardiovascular Diseases drug therapy, Cardiovascular Diseases enzymology, Lipase genetics, Lipase metabolism, Liver enzymology
- Abstract
Purpose of Review: Hepatic lipase plays a key role in the metabolism of pro-atherogenic and anti-atherogenic lipoproteins affecting their plasma level as well as their physico-chemical properties. However, controversial evidence exists concerning whether hepatic lipase is pro or anti-atherogenic. The goal of this review is to summarize recent evidence that connects the enzyme to cardiovascular disease. The potential impact of genetic determinants of hepatic lipase activity in modulating both the development of coronary and carotid atherosclerosis will be discussed based on hepatic lipase proposed roles in lipoprotein metabolism., Recent Findings: Twenty to 30% of individual variation of hepatic lipase activity is accounted for by the presence of a common polymorphism in the promoter region (-514 C to T) of the hepatic lipase gene (LIPC). This polymorphism, via its impact on hepatic lipase synthesis and activity, appears to contribute to (1) individual susceptibility to cardiovascular disease: the presence of the T allele (low hepatic lipase activity) may carry a marginally increased risk of atherosclerosis; (2) carotid plaque composition and individual susceptibility to cerebrovascular events: the presence of the C allele (high hepatic lipase activity) is associated with increased carotid intima-media thickness and abundance of macrophages in the carotid plaque (unstable plaque); and (3) response of cardiovascular disease patients to lipid-lowering therapy: patients with the CC genotype have the greatest clinical benefit from intensive lipid-lowering therapy., Summary: Convincing evidence shows that hepatic lipase plays a key role in remnant lipoprotein catabolism as well as in remodeling of LDL and HDL particles. The anti or pro-atherogenic role of hepatic lipase is likely to be modulated by the concurrent presence of other lipid abnormalities (i.e. increased LDL cholesterol levels) as well as by the genetic regulation of other enzymes involved in lipoprotein metabolism. Characterization of patients by their LIPC genotype will contribute to a better definition of individual risk of coronary and cerebrovascular events, specifically in patients with qualitative (small, atherogenic LDL and low HDL2 cholesterol) rather than quantitative lipid abnormalities for whom the routine lipid profile may underestimate the risk of coronary and cerebrovascular disease.
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- 2003
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40. Genetics of color vision deficiencies.
- Author
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Deeb SS and Kohl S
- Subjects
- Color Perception Tests, Color Vision Defects diagnosis, Humans, Mutation, Rod Opsins genetics, Color Vision Defects genetics
- Abstract
The normal X-chromosome-linked color vision gene array is composed of a single red pigment gene followed by one or more green pigment genes. The high degree of homology between these genes predisposed them to unequal recombination, leading to gene deletions or the formation of red-green hybrid genes that explain the majority of the common red-green color vision deficiencies. Gene expression studies suggest that only the two most proximal genes of the array are expressed in the retina. The severity of the color vision defect is roughly related to the difference in absorption maxima of the photopigments encoded by the first two genes of the array. A single amino acid polymorphism (Ser180Ala) in the red pigment accounts for the subtle difference in normal color vision and influences the severity of color vision deficiency. Blue cone monochromacy is a rare disorder that involves absence of red and green cone function. It is caused either by deletion of a critical region that regulates expression of the red/green gene array, or by mutations that inactivate the red and green pigment genes. Total color blindness is another rare disease that involves complete absence of all cone function. A number of mutations in the genes encoding the cone-specific alpha- and beta-subunits of the cation channel and the alpha-subunit of transducin have been implicated in this disorder.
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- 2003
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41. Association between the --514 C-->T polymorphism of the hepatic lipase gene promoter and unstable carotid plaque in patients with severe carotid artery stenosis.
- Author
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Faggin E, Zambon A, Puato M, Deeb SS, Bertocco S, Sartore S, Crepaldi G, Pessina AC, and Pauletto P
- Subjects
- Aged, Carotid Arteries enzymology, Carotid Arteries pathology, Carotid Arteries surgery, Carotid Stenosis pathology, Female, Follow-Up Studies, Genotype, Humans, Liver pathology, Male, Middle Aged, Severity of Illness Index, Carotid Stenosis enzymology, Carotid Stenosis genetics, Cytosine physiology, Lipase genetics, Liver enzymology, Polymorphism, Genetic genetics, Promoter Regions, Genetic genetics, Tyrosine genetics
- Abstract
Objective: We investigated the potential association between -514 C-->T polymorphism in the promoter of the hepatic lipase gene (LIPC) and the prevalence of inflammatory cells in the plaque of patients with severe carotid artery stenosis., Background: This common LIPC polymorphism has been related to the presence of an atherogenic lipoprotein pattern., Methods: We studied 68 consecutive patients undergoing carotid endarterectomy. The LIPC genotype was determined by polymerase chain reaction. Endarterectomy specimens were examined by immunocytochemistry using monoclonal antibodies for smooth muscle cells, macrophages, or lymphocytes., Results: In 50 of 68 patients who had evidence of previous ipsilateral ischemic events, 36 (72%) were carriers of the CC genotype, whereas only 14 (28%) were carriers of the CT/TT genotype (p = 0.002). Among the 18 patients without evidence of events, the two genotypes were equally distributed (9 vs. 9). The low-density lipoprotein (LDL) particles were denser in CC than in CT/TT genotype carriers (flotation rate: 0.315 +/- 0.025 vs. 0.356 +/- 0.019, p < 0.0005). The CC genotype was associated with an abundance of macrophages (6.7 +/- 3.5 vs. 2.1 +/- 2.1 cells/area unit in the CT/TT group, p < 0.0005) and a reduced number of smooth muscle cells (6.9 +/- 6.2 vs. 14.5 +/- 6.4 in the CT/TT group, p < 0.0005) in the plaque. An inverse relationship was found between LDL buoyancy and the number of macrophages in the plaque (r = -0.639, p < 0.0005)., Conclusion: We provide evidence, for the first time, that LIPC promoter -514 C-->T polymorphism, by modulating LDL density, significantly affects the number of macrophages in the plaque and possibly affects the occurrence of cerebrovascular events in patients with carotid artery stenosis.
- Published
- 2002
- Full Text
- View/download PDF
42. Differential effect of PPARgamma2 variants in the development of type 2 diabetes between native Japanese and Japanese Americans.
- Author
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Nemoto M, Sasaki T, Deeb SS, Fujimoto WY, and Tajima N
- Subjects
- Aged, Asian People, Base Sequence, DNA Primers, Diabetes Mellitus, Type 2 epidemiology, Gene Frequency, Glucose Intolerance epidemiology, Glucose Intolerance genetics, Humans, Japan epidemiology, Japan ethnology, United States, Diabetes Mellitus, Type 2 genetics, Genetic Variation, Receptors, Cytoplasmic and Nuclear genetics, Transcription Factors genetics
- Abstract
Common type 2 diabetes mellitus is a disorder that is though to develop by interaction between genetic and environmental factors. Among these factors, peroxisome proliferator-activated receptor (PPAR)gamma gene was identified as a genetic element which variant form, Pro12Ala, was shown to have differential metabolic activity than the wild type. To elucidate the mechanism of interaction between genetic and environmental factors in development of type 2 diabetes, we analyzed prevalence and metabolic status in the context of the variant form of PPARgamma in 105 native Japanese and 145 Japanese American, both should have different environmental factors. The observed frequency of Pro-allele in Japanese American with diabetes was significantly higher than those with normal glucose tolerance (NGT) (P=0.015), while that in native Japanese with diabetes was not different from those with NGT. Alternatively, Japanese Americans with diabetes with Pro/Pro genotype had significantly higher BMI (P=0.024) and higher fasting serum insulin (P=0.043) level than native Japanese, showing that individuals with Ala-allele could be more sensitive to insulin than those with Pro/Pro genotype. The data with emigrants suggests the possible interaction of gene-environment in the development of type 2 diabetes.
- Published
- 2002
- Full Text
- View/download PDF
43. Contribution of hepatic lipase, lipoprotein lipase, and cholesteryl ester transfer protein to LDL and HDL heterogeneity in healthy women.
- Author
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Carr MC, Ayyobi AF, Murdoch SJ, Deeb SS, and Brunzell JD
- Subjects
- Adult, Analysis of Variance, Carrier Proteins genetics, Cholesterol Ester Transfer Proteins, Female, Genotype, Humans, Lipase genetics, Lipoprotein Lipase genetics, Lipoproteins, HDL genetics, Lipoproteins, HDL2, Lipoproteins, LDL genetics, Middle Aged, Regression Analysis, Taq Polymerase metabolism, Triglycerides metabolism, Carrier Proteins metabolism, Glycoproteins, Lipase metabolism, Lipoprotein Lipase metabolism, Lipoproteins, HDL metabolism, Lipoproteins, LDL metabolism, Liver enzymology
- Abstract
Hepatic lipase (HL) and cholesteryl ester transfer protein (CETP) have been independently associated with low density lipoprotein (LDL) and high density lipoprotein (HDL) size in different cohorts. These studies have been conducted mainly in men and in subjects with dyslipidemia. Ours is a comprehensive study of the proposed biochemical determinants (lipoprotein lipase, HL, CETP, and triglycerides) and genetic determinants (HL gene [LIPC] and Taq1B) of small dense LDL (sdLDL) and HDL subspecies in a large cohort of 120 normolipidemic, nondiabetic, premenopausal women. HL (P<0.001) and lipoprotein lipase activities (P=0.006) were independently associated with LDL buoyancy, whereas CETP (P=0.76) and triglycerides (P=0.06) were not. The women with more sdLDL had higher HL activity (P=0.007), lower HDL2 cholesterol (P<0.001), and lower frequency of the HL (LIPC) T allele (P=0.034) than did the women with buoyant LDL. The LIPC variant was associated with HL activity (P<0.001), HDL2 cholesterol (P=0.034), and LDL buoyancy (P=0.03), whereas the Taq1B polymorphism in the CETP gene was associated with CETP mass (P=0.002) and HDL3 cholesterol (P=0.039). These results suggest that HL activity and HL gene promoter polymorphism play a significant role in determining LDL and HDL heterogeneity in healthy women without hypertriglyceridemia. Thus, HL is an important determinant of sdLDL and HDL2 cholesterol in normal physiological states as well as in the pathogenesis of various disease processes.
- Published
- 2002
- Full Text
- View/download PDF
44. Structural and functional consequences of missense mutations in exon 5 of the lipoprotein lipase gene.
- Author
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Peterson J, Ayyobi AF, Ma Y, Henderson H, Reina M, Deeb SS, Santamarina-Fojo S, Hayden MR, and Brunzell JD
- Subjects
- Adult, Amino Acid Substitution physiology, Animals, COS Cells enzymology, COS Cells metabolism, Cell Line, Chlorocebus aethiops, Exons genetics, Female, Humans, Lipoprotein Lipase blood, Lipoprotein Lipase genetics, Male, Mutagenesis, Site-Directed genetics, Mutagenesis, Site-Directed physiology, Mutation, Missense genetics, Protein Structure, Quaternary genetics, Protein Structure, Quaternary physiology, Exons physiology, Lipoprotein Lipase chemistry, Lipoprotein Lipase physiology, Mutation, Missense physiology
- Abstract
Missense mutations in exon 5 of the LPL gene are the most common reported cause of LPL deficiency. Exon 5 is also the region with the strongest homology to pancreatic and hepatic lipase, and is conserved in LPL from different species. Mutant LPL proteins from post-heparin plasma from patients homozygous for missense mutations at amino acid positions 176, 188, 194, 205, and 207, and from COS cells transiently transfected with the corresponding cDNAs were quantified and characterized, in an attempt to determine which aspect of enzyme function was affected by each specific mutation. All but one of the mutant proteins were present, mainly as partially denatured LPL monomer, rendering further detailed assessment of their catalytic activity, affinity to heparin, and binding to lipoprotein particles difficult. However, the fresh unstable Gly(188)-->Glu LPL and the stable Ile(194)-->Thr LPL, although in native conformation, did not express lipase activity. It is proposed that many of the exon 5 mutant proteins are unable to achieve or maintain native dimer conformation, and that the Ile(194)-->Thr substitution interferes with access of lipid substrate to the catalytic pocket. These results stress the importance of conformational evaluation of mutant LPL. Absence of catalytic activity does not necessarily imply that the substituted amino acid plays a specific direct role in catalysis.
- Published
- 2002
45. The molecular basis of dichromatic color vision in males with multiple red and green visual pigment genes.
- Author
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Jagla WM, Jägle H, Hayashi T, Sharpe LT, and Deeb SS
- Subjects
- Color Vision Defects physiopathology, DNA genetics, DNA isolation & purification, Exons, Genotype, Humans, Male, Multigene Family, Phenotype, Point Mutation, Polymerase Chain Reaction methods, Polymorphism, Single-Stranded Conformational, Promoter Regions, Genetic genetics, Recombination, Genetic, Restriction Mapping, Rod Opsins, X Chromosome genetics, Color Perception genetics, Color Vision Defects genetics, Eye Proteins genetics, Retina physiology, Retinal Pigments genetics
- Abstract
We investigated the genotypic variation in 50 red-green color vision deficient males (27 deuteranopes and 23 protanopes) of middle European ancestry who possess multiple genes in the X-linked photopigment gene array. We have previously shown that only the first two genes of the array are expressed and contribute to the color vision phenotype. Therefore, the hypothesis is that the first two genes possessed by multigene-dichromats encode pigments of identical or nearly identical spectral sensitivity: one gene normal (R or G) and the other a hybrid (G/R or R/G). The spectral sensitivities of the encoded pigments were inferred from published in vitro and in vivo data. The color vision phenotype was assessed by standard anomaloscopy. Most genotypes (92%) included hybrid genes whose sequence and position and whose encoded pigment correlated exactly with the phenotype. However, one and possibly two of the protanopes had gene arrays consistent with protanomaly rather than protanopia, since two spectrally different pigments may be encoded by their arrays. Two of the deuteranopes had only R- and G-photopigment genes, without any detectable G/R-hybrid genes or any as-of-yet identified point mutation or coding/promoter sequence deletions. Further, an unexpectedly high number of multigene-deuteranopes (11%) had the C203R mutation in their most upstream G-pigment gene, suggesting a founder effect of middle European origin for this mutation. About half of the protanopes possessed an upstream R/G-hybrid gene with different exon 2 coding sequences than their downstream G-pigment gene(s), which is inconsistent with published data implying that a single amino acid substitution in exon 2 can confer red-green color discrimination capacity on multigene-protans by altering the optical density of the cones.
- Published
- 2002
- Full Text
- View/download PDF
46. The contribution of intraabdominal fat to gender differences in hepatic lipase activity and low/high density lipoprotein heterogeneity.
- Author
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Carr MC, Hokanson JE, Zambon A, Deeb SS, Barrett PH, Purnell JQ, and Brunzell JD
- Subjects
- Adult, Aged, Bacterial Proteins genetics, Cohort Studies, Female, Genotype, Humans, Male, Middle Aged, Nonlinear Dynamics, Premenopause physiology, Abdomen, Adipose Tissue physiology, Lipase metabolism, Lipoproteins, HDL blood, Lipoproteins, LDL blood, Liver enzymology, Sex Characteristics
- Abstract
Hepatic lipase (HL) hydrolyzes triglyceride and phospholipid in low and high density lipoprotein cholesterol (LDL-C and HDL-C, respectively), and elevated HL activity is associated with small, dense atherogenic LDL particles and reduced HDL2-C. Elevated HL activity is associated with increasing age, male gender, high amounts of intraabdominal fat (IAF), and the HL gene (LIPC) promoter polymorphism (C nucleotide at -514). We investigated the mechanisms underlying the difference in HL activity between men (n = 44) and premenopausal women (n = 63). Men had significantly more IAF (144.5 +/- 80.9 vs. 66.5 +/- 43.2 cm(2), respectively; P < 0.001), higher HL activity (220.9 +/- 94.7 vs.129.9 +/- 53.5 nmol/mL.min; P < 0.001), more dense LDL (Rf, 0.277 +/- 0.032 vs. 0.300 +/- 0.024; P = 0.01), and less HDL2-C (0.19 +/- 0.10 vs. 0.32 +/- 0.16 mmol/L; P < 0.001) than women. After adjusting for IAF and the LIPC polymorphism, men continued to have higher (but attenuated) HL activity (194.5 +/- 80.4 vs.151.0 +/- 45.2, respectively; P = 0.007) and lower HDL2-C (0.23 +/- 0.11 vs. 0.29 +/- 0.14 mmol/L; P = 0.02) than women. Using multiple regression, HL activity remained independently related to IAF (P < 0.001), gender (P < 0.001), and the LIPC genotype (P < 0.001), with these factors accounting for 50% of the variance in HL activity. These data suggest that IAF is a major component of the gender difference in HL activity, but other gender-related differences, perhaps sex steroid hormones, also contribute to the higher HL activity seen in men compared with premenopausal women. The higher HL activity in men affects both LDL and HDL heterogeneity and may contribute to the gender difference in cardiovascular risk.
- Published
- 2001
- Full Text
- View/download PDF
47. Common hepatic lipase gene promoter variant determines clinical response to intensive lipid-lowering treatment.
- Author
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Zambon A, Deeb SS, Brown BG, Hokanson JE, and Brunzell JD
- Subjects
- Analysis of Variance, Cholesterol, HDL blood, Colestipol therapeutic use, Coronary Angiography, Coronary Disease complications, Coronary Disease metabolism, Drug Therapy, Combination, Genotype, Humans, Hyperlipidemias complications, Hyperlipidemias metabolism, Lipase blood, Lipase genetics, Lipoproteins, HDL metabolism, Lipoproteins, LDL metabolism, Lovastatin therapeutic use, Male, Middle Aged, Niacin therapeutic use, Polymerase Chain Reaction, Polymorphism, Genetic, Prognosis, Promoter Regions, Genetic, Regression Analysis, Coronary Disease drug therapy, Hyperlipidemias drug therapy, Hypolipidemic Agents therapeutic use, Lipase antagonists & inhibitors, Liver enzymology
- Abstract
Background: The common -514 C-->T polymorphism in the promoter region of the hepatic lipase (HL) gene affects HL activity. The C allele is associated with higher HL activity, more dense and atherogenic LDL, and lower HDL(2) cholesterol. Intensive lipid-lowering therapy lowers HL activity, increases LDL and HDL buoyancy, and promotes coronary artery disease (CAD) regression. We tested the hypothesis that subjects with the CC genotype and a more atherogenic lipid profile experience the greatest CAD regression from these favorable effects., Methods and Results: Forty-nine middle-aged men with dyslipidemia and established CAD who were undergoing intensive lipid-lowering therapy were studied. Change in coronary stenosis was assessed by quantitative angiography, HL polymorphism by polymerase chain reaction amplification, HL activity by (14)C-labeled substrate, and LDL buoyancy by density-gradient ultracentrifugation. The response to lipid-lowering therapy was significantly different among subjects with different HL promoter genotypes. Subjects with the C:C genotype had the greatest decrease in HL activity (P<0.005 versus TC and TT by ANOVA) and the greatest improvement in LDL density (P<0.005) and HDL(2)-C (P<0.05) with therapy. These subjects had the greatest angiographic improvement, with 96% of them experiencing CAD regression, compared with 60% of TC and none of the TT patients (P:<0.001)., Conclusions: -In middle-aged men with established CAD and dyslipidemia, the HL gene -514 C-->T polymorphism significantly predicts changes in coronary stenosis with lipid-lowering treatment that appear to involve an HL-associated effect on LDL metabolism. This study identifies a gene polymorphism that strongly influences the lipid and clinical response to lipid-lowering drugs.
- Published
- 2001
- Full Text
- View/download PDF
48. Hepatic lipase as a focal point for the development and treatment of coronary artery disease.
- Author
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Zambon A, Brown BG, Deeb SS, and Brunzell JD
- Subjects
- Cholesterol, LDL metabolism, Clinical Trials as Topic, Coronary Disease drug therapy, Coronary Disease etiology, Humans, Hypolipidemic Agents therapeutic use, Lipase genetics, Liver enzymology, Coronary Disease enzymology, Lipase metabolism
- Abstract
Recent epidemiological evidence suggests that although lowering low-density lipoprotein (LDL) cholesterol is important in decreasing cardiovascular disease morbidity and mortality, it accounts only for part of the coronary artery disease (CAD) improvement with lipid-lowering therapy. In the last decade, it has become evident that the atherogenicity of LDL particles is associated not only with their plasma levels, but also with their size and density. The presence of small, dense LDL particles is associated with a three fold increase in CAD risk. Hepatic lipase (HL), a key enzyme in the formation of small, dense LDL particles, modulates their phospholipid and triglyceride contents. The higher the HL activity, the smaller, denser, and more atherogenic the resulting lipoprotein particle. It is, therefore, plausible to hypothesize that at least part of the CAD benefits observed in the recent CAD-prevention pharmacological trials, which are not accounted for by the decrease in LDL-C (LDL-cholesterol), might be explained by a pharmacological effect on LDL size and density, possibly mediated by changes in hepatic lipase activity. By studying patients with dyslipidemia and CAD, we have been able to provide strong evidence that regression of coronary atherosclerosis results from at least two independent effects of lipid-lowering therapy on lipoprotein metabolism: the well known one that leads to changes in LDL-C and apo B levels, and a new pathway of HL-mediated improvement in LDL buoyancy. Finally, HL activity and LDL density appear to be significantly affected by the presence of a common C-->T substitution at position -514 with respect to the transcription start site of the HL gene, raising the possibility that the -514 C-->T polymorphism may significantly contribute to differences in individual CAD response to lipid-lowering treatment, as seen in the recent major primary and secondary CAD-prevention clinical trials.
- Published
- 2001
- Full Text
- View/download PDF
49. Polymorphisms at the Werner locus: II. 1074Leu/Phe, 1367Cys/Arg, longevity, and atherosclerosis.
- Author
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Castro E, Edland SD, Lee L, Ogburn CE, Deeb SS, Brown G, Panduro A, Riestra R, Tilvis R, Louhija J, Penttinen R, Erkkola R, Wang L, Martin GM, and Oshima J
- Subjects
- Adult, Aged, Aged, 80 and over, Aging genetics, Arginine genetics, Arteriosclerosis epidemiology, Coronary Artery Disease epidemiology, Coronary Artery Disease genetics, Cysteine genetics, Finland epidemiology, Gene Frequency, Genotype, Haplotypes, Humans, Infant, Newborn, Leucine genetics, Mexico epidemiology, Middle Aged, Phenylalanine genetics, Werner Syndrome epidemiology, Amino Acid Substitution genetics, Arteriosclerosis genetics, Longevity genetics, Polymorphism, Genetic genetics, Werner Syndrome genetics
- Abstract
Werner syndrome (WS) is a progeroid syndrome caused by autosomal recessive null mutations at the WRN locus. The WRN gene encodes a nuclear protein of 180 kD that contains both exonuclease and helicase domains. WS patients develop various forms of arteriosclerosis, particularly atherosclerosis, and medial calcinosis. The most common cause of death in Caucasian subjects with WS is myocardial infarction. Previous studies have identified specific polymorphisms within WRN that may modulate the risk of atherosclerosis. Population studies of the 1074Leu/Phe and 1367Cys/Arg polymorphisms were undertaken to evaluate the role of WRN in atherogenesis. Frequencies of the 1074Leu/Phe polymorphisms in Finnish and Mexican populations revealed an age-dependent decline of 1074Phe/Phe genotype. In Mexican newborns, but not in Finnish newborns, the 1074Leu/Phe and 1367Cys/ Arg polymorphisms were in linkage disequilibrium. Among coronary artery disease subjects, there was a tendency for the 1074Phe allele to be associated with coronary stenosis in a gene dose-dependent manner. Furthermore, the 1367Arg/Arg genotype predicted a lower degree of coronary artery occlusion, as measured by NV50, when compared to the 1367Cys/Cys or 1367Cys/Arg genotypes. However, these tendencies did not achieve statistical significance. Samples from Mexican patients with ischemic stroke showed a trend of haplotype frequencies different from that in a control group of Mexican adults. These data support the hypothesis that WRN may mediate not only WS, but may also modulate more common age-related disorders and, perhaps, a basic aging process.
- Published
- 2000
50. In vivo evidence of a role for hepatic lipase in human apoB-containing lipoprotein metabolism, independent of its lipolytic activity.
- Author
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Zambon A, Deeb SS, Bensadoun A, Foster KE, and Brunzell JD
- Subjects
- Aged, Humans, Lipolysis, Male, Apolipoproteins B metabolism, Lipase metabolism, Liver enzymology
- Abstract
Hepatic lipase (HL) is a key player in lipoprotein metabolism by modulating, through its lipolytic activity, the triglyceride (TG) and phospholipid content of apolipoprotein B (apoB)-containing lipoproteins and of high density lipoproteins (HDL), thereby affecting their size and density. A new and separate role has been suggested for HL in cellular lipoprotein metabolism, in which it serves as a ligand promoting cellular uptake of apoB-containing remnant lipoproteins and HDL. We tested the hypothesis that HL has both a lipolytic and a nonlipolytic role in human lipoprotein metabolism, by measuring lipid plasma concentrations, lipoprotein density distribution by density gradient ultracentrifugation, and lipoprotein composition, in three subjects with HL deficiency: two of the patients (S-1 and S-3) were characterized as having neither plasma HL activity nor detectable HL protein; the third subject (S-2) had no plasma HL activity but a detectable amount (35.5 ng/ml) of HL protein. All HL-deficient subjects showed a severalfold increase in lipoprotein TG content across the lipoprotein density spectrum [very low density lipoprotein (VLDL), intermediate density lipoprotein (IDL), low density lipoprotein (LDL), and HDL] as compared with control subjects. They also had remarkably more buoyant LDL particles (LDL-R(f) = 0.342;-0.394) as compared with the control subjects (LDL-R(f) = 0.303). Subjects S-1 and S-3 (no HL activity or protein) presented with a distinct increase in cholesterol and apoB levels in the IDL and VLDL density range as compared with patient S-2, with detectable HL protein, and the control subjects. This study provides evidence in humans that HL indeed plays an important role in lipoprotein metabolism independent of its enzymatic activity: in particular, inactive HL protein appears to affect VLDL and IDL particle concentration, whereas HL enzymatic activity seems to influence VLDL-, IDL-, LDL-, and HDL-TG content and their physical properties.
- Published
- 2000
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