184 results on '"DeVincenzi, Donald L"'
Search Results
2. Spectroscopic Detection of a Stellar-like Photosphere in an Accreting Protostar
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Greene, Thomas P, Lada, Charles J, and DeVincenzi, Donald L
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Astronomy - Abstract
We present high-resolution (R is approximately equal to 18,000), high signal-to-noise 2 micron spectra of two luminous, X-ray flaring Class I protostars in the rho Ophiuchi cloud acquired with the NIRSPEC (near infrared spectrograph) of the Keck II telescope. We present the first spectrum of a highly veiled, strongly accreting protostar which shows photospheric absorption features and demonstrates the stellar nature of its central core. We find the spectrum of the luminous (L (sub bol) = 10 solar luminosity) protostellar source, YLW 15, to be stellar-like with numerous atomic and molecular absorption features, indicative of a K5 IV/V spectral type and a continuum veiling r(sub k) = 3.0. Its derived stellar luminosity (3 stellar luminosity) and stellar radius (3.1 solar radius) are consistent with those of a 0.5 solar mass pre-main-sequence star. However, 70% of its bolometric luminosity is due to mass accretion, whose rate we estimate to be 1.7 x 10(exp -6) solar masses yr(exp -1). We determine that excess infrared emission produced by the circumstellar accretion disk, the inner infalling envelope, and accretion shocks at the surface of the stellar core of YLW 15 all contribute significantly to its near-IR (infrared) continuum veiling. Its rotational velocity v sin i = 50 km s(exp -1) is comparable to those of flat-spectrum protostars but considerably higher than those of classical T Tauri stars in the rho Oph cloud. The protostar may be magnetically coupled to its circumstellar disk at a radius of 2 - 3 R(sub *). It is also plausible that this protostar can shed over half its angular momentum and evolve into a more slowly rotating classical T Tauri star by remaining coupled to its circumstellar disk (at increasing radius) as its accretion rate drops by an order of magnitude during the rapid transition between the Class I and Class II phases of evolution. The spectrum of WL 6 does not show any photospheric absorption features, and we estimate that its continuum veiling is r(sub k) is greater than or equal to 4.6. Its low luminosity (2 solar masses) and high veiling dictate that its central protostar is very low mass, M is approx. 0.1 solar masses. We also evaluate multi-epoch X ray data along with these spectra and conclude that the X ray variabilities of these sources are not directly related to their protostellar rotation velocities.
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- 2002
3. Cometary Science After Hale-Bopp
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Wooden, Diane H and DeVincenzi, Donald L
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Astrophysics - Abstract
Comets and the chondritic porous interplanetary dust particles (CP IDPs) that they shed in their comae are reservoirs of primitive solar nebula materials. The high porosity and fragility of cometary grains and CP IDPs, and anomalously high deuterium contents of pyroxene-rich CP IDPs imply these aggregate particles contain significant interstellar grain components. Spectrophotometry of comets at thermal IR wavelengths (3-40 microns) reveal the presence of a warm (near-IR) featureless emission modeled by amorphous carbon grains, and mid-IR and far-IR broad and narrow resonances modeled by chondritic (50% Fe and 50% Mg) amorphous and Mg-rich crystalline silicate minerals, respectively. Cometary amorphous silicate resonances are well matched by IR spectra of CP IDPs dominated by 0.1 micron spherules of Glass with Embedded Metal and Sulfides (GEMS) that are thought to be the interstellar Fe-bearing amorphous silicates produced in the cooling outflows of Asymptotic Giant Branch (AGB) stars. Acid-etched microtomed CP IDP samples, however, show that both the carbon phase (aliphatic) and the amorphous silicate phase (Mg-rich) are not optically absorbing while the embedded Fe nanoparticles make the IDPs dark. The CP IDPs suggest either significant processing has occurred in the ISM or that the AGB amorphous silicates have Mg-rich stoichiometry and possibly grew on Fe particle condensates. Cometary crystalline silicate resonances are well matched by IR spectra of laboratory submicron Mg-rich olivine crystals, [Mg(sub y),Fe(sub 1-y)]2SiO4 with y/ge0.85, and in the case of Hale-Bopp at r(sub h) less than or equal to approx. 1.5 AU, by Mg-rich pyroxene crystals, [Mg(sub x),Fe(sub 1-x)]SiO3 with x/ge0.85. While a fraction of AGB stardust (less than or equal to 15%) are Mg-rich crystals, this interstellar star dust component is insufficient to account for the deduced abundance of crystalline minerals in comet dust. An insufficient source of ISM Mg-rich crystals leads to the inference that Mg-rich crystals in comets may be hot, early solar nebula condensates that traveled large radial distances out to the comet-forming zone.
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- 2002
4. Limits on the UV Photodecomposition of Carbonates on Mars
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Quinn, Richard, Zent, Aaron P, McKay, Christopher P, and DeVincenzi, Donald L
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Lunar And Planetary Science And Exploration - Abstract
The effect of UV (ultraviolet) light on the stability of calcium carbonate in a simulated martian atmosphere was experimentally investigated. Sample cells containing C-13 labeled calcite were irradiated with a Xe arc lamp in 10 mbar of simulated martian atmosphere and a quadrupole mass spectrometer was used to monitor the headspace gases for the production of (13)CO2. We found no experimental evidence of the UV photodecomposition of calcium carbonate in a simulated martian atmosphere. Extrapolating the lower limit of detection of our experimental system to an upper limit of carbonate decomposition on Mars yields a quantum efficiency of 3.5 x 10(exp -8) molecules/photon over the wavelength interval of 190-390 nm and a maximum UV photodecomposition rate of 1.2 x 10(exp -13) kg m(exp -2) s(exp -1) from a calcite surface. The maximum loss of bulk calcite due to this process would be 2.5 nm yr(exp -1). However, calcite is expected to be thermodynamically stable on the surface of Mars and potential UV photodecomposition reaction mechanisms indicate that while calcium carbonate may decompose under vacuum, it would be stable in a CO2 atmosphere. Given the expected stability of carbonate on Mars and our inability to detect carbonate decomposition, we conclude that it is unlikely that the apparent absence of carbonate on the martian surface is due to UV photo decomposition of calcite in the current environment.
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- 2002
5. Mars Sample Handling Protocol Workshop Series
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Race, Margaret S, Nealson, Kenneth H, Rummel, John D, Acevedo, Sara E, and Devincenzi, Donald L
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Astrodynamics - Abstract
This report provides a record of the proceedings and recommendations of Workshop 3 of the Series, which was held in San Diego, California, March 19-21, 2001. Materials such as the Workshop agenda and participant lists as well as complete citations of all references and a glossary of terms and acronyms appear in the Appendices. Workshop 3 builds on the deliberations and findings of the earlier workshops in the Series, which have been reported separately. During Workshop 3, five individual sub-groups were formed to discuss the following topics: (1) Unifying Properties of Life, (2) Morphological organization and chemical properties, (3) Geochemical and geophysical properties, (4) Chemical Method and (5) Cell Biology Methods.
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- 2001
6. Artificial Cells: Prospects for Biotechnology
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Pohorille, Andrew, Deamer, David, and DeVincenzi, Donald L
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Life Sciences (General) - Abstract
A variety of techniques can now be used to alter the genome of a cell. Although these techniques are very powerful, they also have limitations related to cost and efficiency of scale. Artificial cells designed for specific applications combine properties of biological systems such as nano-scale efficiency, self-organization and adaptability at relatively low cost. Individual components needed for such structures have already been developed, and now the main challenge is to integrate them in functional microscopic compartments. It will then become possible to design and construct communities of artificial cells that can perform different tasks related to therapeutic and diagnostic applications.
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- 2001
7. Mars Sample Handling Protocol Workshop Series: Workshop 2a (Sterilization)
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Rummel, John D, Brunch, Carl W, Setlow, Richard B, and DeVincenzi, Donald L
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Lunar And Planetary Science And Exploration - Abstract
The Space Studies Board of the National Research Council provided a series of recommendations to NASA on planetary protection requirements for future Mars sample return missions. One of the Board's key findings suggested, although current evidence of the martian surface suggests that life as we know it would not tolerate the planet's harsh environment, there remain 'plausible scenarios for extant microbial life on Mars.' Based on this conclusion, all samples returned from Mars should be considered potentially hazardous until it has been demonstrated that they are not. In response to the National Research Council's findings and recommendations, NASA has undertaken a series of workshops to address issues regarding NASA's proposed sample return missions. Work was previously undertaken at the Mars Sample Handling and Protocol Workshop 1 (March 2000) to formulate recommendations on effective methods for life detection and/or biohazard testing on returned samples. The NASA Planetary Protection Officer convened the Mars Sample Sterilization Workshop, the third in the Mars Sample Handling Protocol Workshop Series, on November 28-30, 2000 at the Holiday Inn Rosslyn Westpark, Arlington, Virginia. Because of the short timeframe between this Workshop and the second Workshop in the Series, which was convened in October 2000 in Bethesda, Maryland, they were developed in parallel, so the Sterilization Workshop and its report have therefore been designated as '2a'). The focus of Workshop 2a was to make recommendations for effective sterilization procedures for all phases of Mars sample return missions, and to answer the question of whether we can sterilize samples in such a way that the geological characteristics of the samples are not significantly altered.
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- 2001
8. Plasma CVD of Carbon Nanotubes
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Delzeit, Lance, Cruden, B, Hash, D, Meyyappan, M, and DeVincenzi, Donald L
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Solid-State Physics - Abstract
Carbon nanotubes(CNT) exhibit remarkable mechanical and unique electronic properties and thus have created excitement in the research community about their potential in electronics, computing, sensor and structural applications. Realization of these applications critically depends on the ability to control the properties(such as diameter, chirality) as well purity. We have investigated CNT growth using an inductively coupled plasma(ICP) process using hydrocarbon feedstock. The catalyst required for nanotube growth consists of thin sputtered layers of aluminum and iron(10 nm each) and aligned carbon nanotubes have been obtained. Optical emission diagnostics as well as a plasma modeling effort have been undertaken to understand growth mechanisms. This presentation will discuss growth characteristics under various pressure, power and feedgas compositions and our understanding from modeling and diagnostics.
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- 2001
9. Calculating Free Energies Using Average Force
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Darve, Eric, Pohorille, Andrew, and DeVincenzi, Donald L
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Numerical Analysis - Abstract
A new, general formula that connects the derivatives of the free energy along the selected, generalized coordinates of the system with the instantaneous force acting on these coordinates is derived. The instantaneous force is defined as the force acting on the coordinate of interest so that when it is subtracted from the equations of motion the acceleration along this coordinate is zero. The formula applies to simulations in which the selected coordinates are either unconstrained or constrained to fixed values. It is shown that in the latter case the formula reduces to the expression previously derived by den Otter and Briels. If simulations are carried out without constraining the coordinates of interest, the formula leads to a new method for calculating the free energy changes along these coordinates. This method is tested in two examples - rotation around the C-C bond of 1,2-dichloroethane immersed in water and transfer of fluoromethane across the water-hexane interface. The calculated free energies are compared with those obtained by two commonly used methods. One of them relies on determining the probability density function of finding the system at different values of the selected coordinate and the other requires calculating the average force at discrete locations along this coordinate in a series of constrained simulations. The free energies calculated by these three methods are in excellent agreement. The relative advantages of each method are discussed.
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- 2001
10. Mars Sample Handling Protocol Workshop Series: Workshop 2
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Rummel, John D, Acevedo, Sara E, Kovacs, Gregory T. A, Race, Margaret S, and DeVincenzi, Donald L
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Lunar And Planetary Science And Exploration - Abstract
Numerous NASA reports and studies have identified Planetary Protection (PP) as an important part of any Mars sample return mission. The mission architecture, hardware, on-board experiments, and related activities must be designed in ways that prevent both forward- and back-contamination and also ensure maximal return of scientific information. A key element of any PP effort for sample return missions is the development of guidelines for containment and analysis of returned sample(s). As part of that effort, NASA and the Space Studies Board (SSB) of the National Research Council (NRC) have each assembled experts from a wide range of scientific fields to identify and discuss issues pertinent to sample return. In 1997, the SSB released its report on recommendations for handling and testing of returned Mars samples. In particular, the NRC recommended that: a) samples returned from Mars by spacecraft should be contained and treated as potentially hazardous until proven otherwise, and b) rigorous physical, chemical, and biological analyses [should] confirm that there is no indication of the presence of any exogenous biological entity. Also in 1997, a Mars Sample Quarantine Protocol workshop was convened at NASA Ames Research Center to deal with three specific aspects of the initial handling of a returned Mars sample: 1) biocontainment, to prevent 'uncontrolled release' of sample material into the terrestrial environment; 2) life detection, to examine the sample for evidence of organisms; and 3) biohazard testing, to determine if the sample poses any threat to terrestrial life forms and the Earth's biosphere. In 1999, a study by NASA's Mars Sample Handling and Requirements Panel (MSHARP) addressed three other specific areas in anticipation of returning samples from Mars: 1) sample collection and transport back to Earth; 2) certification of the samples as non-hazardous; and 3) sample receiving, curation, and distribution. To further refine the requirements for sample hazard testing and the criteria for subsequent release of sample materials from quarantine, the NASA Planetary Protection Officer convened an additional series of workshops beginning in March 2000. The overall objective of these workshops was to develop comprehensive protocols to assess whether the returned materials contain any biological hazards, and to safeguard the purity of the samples from possible terrestrial contamination. This document is the report of the second Workshop in the Series. The information herein will ultimately be integrated into a final document reporting the proceedings of the entire Workshop Series along with additional information and recommendations.
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- 2001
11. The Biogeochemistry of Sulfur in Hydrothermal Systems
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Schulte, Mitchell, Rogers, K. L, and DeVincenzi, Donald L
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Life Sciences (General) - Abstract
The incorporation of sulfur into many biomolecules likely dates back to the development of the earliest metabolic strategies. Sulfur is common in enzymes and co-enzymes and is an indispensable structural component in many peptides and proteins. Early metabolism may have been heavily influenced by the abundance of sulfide minerals in hydrothermal systems. The incorporation of sulfur into many biomolecules likely dates back to the development of the earliest metabolic strategies. Sulfur is common in enzymes and co-enzymes and is an indispensable structural component in many peptides and proteins. Early metabolism may have been heavily influenced by the abundance of sulfide minerals in hydrothermal systems. Understanding how sulfur became prevalent in biochemical processes and many biomolecules requires knowledge of the reaction properties of sulfur-bearing compounds. We have previously estimated thermodynamic data for thiols, the simplest organic sulfur compounds, at elevated temperatures and pressures. If life began in hydrothermal environments, it is especially important to understand reactions at elevated temperatures among sulfur-bearing compounds and other organic molecules essential for the origin and persistence of life. Here we examine reactions that may have formed amino acids with thiols as reaction intermediates in hypothetical early Earth hydrothermal environments. (There are two amino acids, cysteine and methionine, that contain sulfur.) Our calculations suggest that significant amounts of some amino acids were produced in early Earth hydrothermal fluids, given reasonable concentrations H2, NH3, H2S and CO. For example, preliminary results indicate that glycine activities as high as 1 mmol can be reached in these systems at 100 C. Alanine formation from propanethiol is also a favorable reaction. On the other hand, the calculated equilibrium log activities of cysteine and serine from propanethiol are -21 and -19, respectively, at 100 C. These results indicate that while amino acid formation with thiols as intermediates is favored in some cases, other mechanisms may have been necessary to produce significant amounts of other amino acids. Coupled with our previous results for thiols, these studies imply that sulfur may have been easily incorporated into the organic geochemistry of early Earth hydrothermal systems, leading to its widespread use in biomolecules. Formation of more complex biomolecules in hydrothermal systems may have required sulfur-bearing organic compounds as reaction intermediates.
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- 2001
12. Effects of warming and drying of soils on the ectomycorrhizal community of a mixed Pinus contorta/Picea engelmannii stand in Yellowstone Park
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Cullings, Kenneth, Finley, S. K, Parker, V. T, Makhija, S, and DeVincenzi, Donald L
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Life Sciences (General) - Abstract
Restriction Fragment Length Polymorphisms (RFLPs) analyses were used to determine patterns of change in ectomycorrhizal community structure response to seasonal warming and drying of soils. Soil cores (42 total, 21 from cold and wet soil in early June, and 21 from dry, warm soil in late August) were collected from replicate blocks in a mixed-conifer forest stand in Yellowstone. Results indicated no significant differences in species richness (2.62 species/core, SE 0.2 in June; 3.25, SE 0.2 in August), however there was a significant effect on ectomycorrhizal infection (P<0.05), mean number of EM tips/core was significantly lower in June (185.8, SE 34) than in August (337 SE 78). Data indicated no difference in overall EM fungal species composition, however among system dominants, two species (Cortinarius 9 and Cortinarius 10) were more abundant in August than in June (P<0.02). The remaining dominant fungal species exhibited no differences in relative abundance. Results are discussed in relation to soil fertility and composition.
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- 2001
13. The AIRES Optical Design
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Haas, Michael R and DeVincenzi, Donald L
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Avionics And Aircraft Instrumentation - Abstract
AIRES (Airborne InfraRed Echelle Spectrometer) is the facility spectrometer for SOFIA (Stratospheric Observatory For Infrared Astronomy). AIRES is a long-slit (approximately 160 in) spectrometer designed to cover the 17 to 210-micron range with good sensitivity using three spectroscopic arrays. Initially, only the 30-130 micron, mid-wavelength array will be available. The instrument has a cryogenic K-mirror to perform field rotation and a slit-viewing camera (lambda < 28 microns, FOV = 160 in diameter) to image source morphology and verify telescope pointing. AIRES employs a large echelle grating to achieve a spectral resolving power (lambda/delta lambda) of approximately 1.0 x 10(exp 6)/lambda (sub mu), where lambda (sub mu) is the wavelength in microns. Hyperfine, Inc. has ruled and tested the AIRES' echelle; its wave-front error is 0.028 waves RMS (root mean square) at 10.6 microns. The instrument is housed in a liquid-helium cryostat which is constrained in diameter (approximately 1 m) and length (approximately 2 m) by the observatory. Hence, the length of the echelle (approximately 1.1 m) and the focal length of its collimator (approximately 5.2 m) severely drive the optical design and packaging. The final design uses diamond-turned aluminum optics and has up to 19 reflections inside the cryostat, depending on the optical path. This design was generated, optimized, and toleranced using Code V. The predicted performance is nearly diffraction-limited at 17 microns; the error budget is dominated by design residuals. Light loss due to slit rotation and slit curvature has been minimized. A thorough diffraction analysis with GLAD (G-Level Analysis Drawer) was used to size the mirrors and baffles; the internal light loss is shown to be a strong function of slit width.
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- 2001
14. Better, Cheaper, Faster Molecular Dynamics
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Pohorille, Andrew and DeVincenzi, Donald L
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Aerospace Medicine - Abstract
Recent, revolutionary progress in genomics and structural, molecular and cellular biology has created new opportunities for molecular-level computer simulations of biological systems by providing vast amounts of data that require interpretation. These opportunities are further enhanced by the increasing availability of massively parallel computers. For many problems, the method of choice is classical molecular dynamics (iterative solving of Newton's equations of motion). It focuses on two main objectives. One is to calculate the relative stability of different states of the system. A typical problem that has' such an objective is computer-aided drug design. Another common objective is to describe evolution of the system towards a low energy (possibly the global minimum energy), "native" state. Perhaps the best example of such a problem is protein folding. Both types of problems share the same difficulty. Often, different states of the system are separated by high energy barriers, which implies that transitions between these states are rare events. This, in turn, can greatly impede exploration of phase space. In some instances this can lead to "quasi non-ergodicity", whereby a part of phase space is inaccessible on time scales of the simulation. To overcome this difficulty and to extend molecular dynamics to "biological" time scales (millisecond or longer) new physical formulations and new algorithmic developments are required. To be efficient they should account for natural limitations of multi-processor computer architecture. I will present work along these lines done in my group. In particular, I will focus on a new approach to calculating the free energies (stability) of different states and to overcoming "the curse of rare events". I will also discuss algorithmic improvements to multiple time step methods and to the treatment of slowly decaying, log-ranged, electrostatic effects.
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- 2001
15. Molecular Dynamics Studies of Structure and Functions of Water-Membrane Interfaces
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Pohorille, Andrew, Wilson, Michael A, and DeVincenzi, Donald L
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Aerospace Medicine - Abstract
A large number of essential cellular processes occur at the interfaces between water and membranes. The selectivity and dynamics of these processes are largely determined by the structural and electrical properties of the water-membrane interface. We investigate these properties by the molecular dynamics method. Over the time scales of the simulations, the membrane undergoes fluctuations described by the capillary wave model. These fluctuations produce occasional thinning defects in the membrane which provide effective pathways for passive transport of ions and small molecules across the membrane. Ions moving through the membrane markedly disrupt its structure and allow for significant water penetration into the membrane interior. Selectivity of transport, with respect to ionic charge, is determined by the interfacial electrostatic potential. Many small molecules. of potential significance in catalysis, bioenergetics and pharmacology, are shown to bind to the interface. The energetics and dynamics of this process will be discussed.
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- 2001
16. Composition of Hydrothermal Vent Microbial Communities as Revealed by Analyses of Signature Lipids, Stable Carbon Isotopes and Aquificales Cultures
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Jahnke, Linda L, Edger, Wolfgang, Huber, Robert, Hinrichs, Kai-Uwe, Hayes, John M, DesMarais, David J, Cady, Sherry, Hope, Janet M, Summons, Roger E, and DeVincenzi, Donald L
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Life Sciences (General) - Abstract
Extremely thermophilic microbial communities associated with the siliceous vent walls and outflow channel of Octopus Spring, Yellowstone National Park, have been examined for lipid biomarkers and carbon isotopic signatures. These data were compared with that obtained from representatives of three Aquificales genera. Thermocrinis ruber. "Thermocrinis sp. HI", Hydrogenobacter thermophilus TK-6, Aquifex pyrophilus and Aquifex aeolicus all contained phospholipids composed not only of the usual ester-linked fatty acids, but also ether-linked alkyls. The fatty acids of all cultured organisms were dominated by a very distinct pattern of n-C-20:1 and cy-C-21 compounds. The alkyl glycerol ethers were present primarily as CIS() monoethers with the expection of the Aquifex spp. in which dialkyl glycerol ethers with a boarder carbon-number distribution were also present. These Aquificales biomarker lipids were the major constituents in the lipid extracts of the Octopus Spring microbial samples. Two natural samples, a microbial biofilm growing in association with deposition of amorphous silica on the vent walls at 92 C, and the well-known 'pink-streamers community' (PSC), siliceous filaments of a microbial consortia growing in the upper outflow channel at 87 C were analyzed. Both the biofilm and PSC samples contained mono and dialkyl glycerol ethers with a prevalence of C-18 and C-20 alkyls. Phospholipid fatty acids were comprised of both the characteristic Aquificales n-C-20:1 and cy-C-21, and in addition, a series of iso-branched fatty acids from i-C-15:0 to i-C-21:0, With i-C-17:0 dominant in the PSC and i-C-19:0 in the biofilm, suggesting the presence of two major bacterial groups. Bacteriohopanepolyols were absent and the minute quantities of archaeol detected showed that Archaea were only minor constituents. Carbon isotopic compositions of the PSC yielded information about community structure and likely physiology. Biomass was C-13-depleted (10.9%) relative to available CO2 from the source water inorganic carbon pool with lipids further depleted by 6.3% relative to biomass The C-20-21 Aquificales fatty acids of the PSC were somewhat heavier than the iso-branched fatty acids. The carbon isotopic signatures of lipid biomarkers were also explored using a pure culture, T ruber, previously isolated from the PSC. Cells grown on C02 with O2 and both H2 and thiosulfate as electron donors were only slightly depleted (3.3%) relative to the C-source while cells grown on formate with O2 showed a major discrimination (19.7%), possibly the result of a metabolic branch point involving the assimilation of C-formate to biomass and the dissimilation to CO2 associated with energy production. T. ruber lipids were slightly heavier than biomass (+1.3%) whether cells were grown using CO2 or formate. Fatty acids from CO2 grown T. ruber cells were a so slightly heavier (average +2.1%) than biomass. The relatively depleted PSC C-20-21 fatty acids suggest that any associated Thermocrinis biomass would also be similarly depleted and much too light to be explained by growth on CO2. The C-fractionations determined with the pure culture suggest that growth of Thermocrinis in the PSC is more likely to occur on formate, presumably generated by geothermal activity. This study points to the value of the analysis of the structural and isotopic composition of lipid blomarkers both in pure culture studies, and in establishing community structure and physiology, as a complement to genomic profiles of microbial diversity. This is especially so when the members of the microbial community are novel and difficult to cultivate in the laboratory.
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- 2001
17. A Novel Catalyst Deposition Technique for the Growth of Carbon Nanotubes
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Delzeit, Lance, Cassell, A, Stevens, R, Nguyen, C, Meyyappan, M, and DeVincenzi, Donald L
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Solid-State Physics - Abstract
This viewgraph presentation provides information on the development of a technique at NASA's Ames Research Center by which carbon nanotubes (NT) can be grown. The project had several goals which included: 1) scaleability, 2) ability to control single wall nanotube (SWNT) and multiwall nanotube (MWNT) formation, 3) ability to control the density of nanotubes as they grow, 4) ability to apply standard masking techniques for NT patterning. Information regarding the growth technique includes its use of a catalyst deposition process. SWNTs of varying thicknesses can be grown by changing the catalyst composition. Demonstrations are given of various methods of masking including the use of transmission electron microscopic (TEM) grids.
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- 2001
18. Deuterium Fractionation in Analogs of Interstellar Ices: Laboratory Measurements
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Sandford, Scott A and DeVincenzi, Donald L
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Exobiology - Abstract
A question of key interest in the field of Astrobiology is the extent to which organic compounds made in space may play a role in the origin of life in planetary systems. In general, the best proof that at least some interstellar materials survive incorporation into forming stellar/planetary systems is their identification in extraterrestrial samples through detection of the isotopic anomalies they may carry. In the case of organic compounds, the chief isotopic anomalies that might be expected are the enrichment of D and 15N. and such enrichments are seen in primitive extraterrestrial materials, for example, in the organics in carbonaceous chondrites and interplanetary dust particles. In my talk I will review the various astrochemical processes by which deuterium can become enriched in organic compounds and will discuss some recent laboratory experiments that examine one of these processes in particular. name]y the UV photolysis of interstellar ices. Finally, I will review the current state of our knowledge of D enrichments in primitive solar system materials and discuss the constraints these data place on the relative importance of the various possible interstellar D enrichment processes.
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- 2001
19. Iceland as a Model for Chemical Alteration on Mars
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Bishop, Janice L, Schiffman, P, Murad, E, Southard, R, and DeVincenzi, Donald L
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Lunar And Planetary Science And Exploration - Abstract
Subglacial volcanic activity on Iceland has led to the formation of a variety of silicate and iron oxide-rich alteration products that may serve as a model for chemical alteration on Mars. Multiple palagonitic tuffs, altered pillow lavas, hydrothermal springs and alteration at glacial run-off streams were observed during a recent field trip in Iceland. Formation of alteration products and ferrihydrite in similar environments on Mars may have contributed to the ferric oxide-rich surface material there. The spectral and chemical properties of Icelandic alteration products and ferrihydrites are presented here.
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- 2001
20. Spectroscopic and Geochemical Analyses of Ferrihydrite from Hydrothermal Springs in Iceland and Applications to Mars
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Bishop, Janice, Murad, E, and DeVincenzi, Donald L
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Inorganic, Organic And Physical Chemistry - Abstract
Ferrihydrite samples were collected from a thermal spring and a cold stream in the Landmannalaugar region of Iceland. Chemical and spectroscopic analyses have been performed on the air-dried and fine-grained fractions of these samples. The ferrihydrite from the cold stream is a pure sample, containing small amounts of Ca, P and Si, which do not form minerals detectable with X-ray diffraction (XRD) or reflectance and transmittance spectroscopy. The ferrihydrite from the thermal pool is a less pure sample, containing larger amounts of amorphous Si and P. The XRD and spectral features for this sample are also consistent with a less crystalline structure. Some of the Si is incorporated in the structure of the ferrihydrite. The Ca, P and possibly some of the Si may be biogenic. The spectral character of these Icelandic ferrihydrites is compared with those of synthetic ferrihydrites and other iron oxide/oxyhydroxide minerals. Ferrihydrite is characterized by a broad Fe3+ excitation band near 0.92 microns (approx. 10900/cm) and a strong Fe-O absorption feature near 475/cm (approx. 21 microns) in transmittance spectra. Multiple bands due to H2O and OH are also present for ferrihydrite. Natural ferrihydrites frequently exhibit a band near 950-1050/cm (approx. 10 microns) that is typically not observed for synthetic ferrihydrites and may be due to some Si in the structure. An additional pair of spectral bands near 1400 and 1500/cm (approx. 7 microns) are characteristic of pure ferrihydrites from natural and synthetic sources. Hydrothermal springs may have been present at one time on Mars in association with volcanic activity. Ferrihydrite formation in such an environment may have contributed to the ferric oxide-rich surface material on Mars.
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- 2001
21. Physical Properties of Centaur Objects
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Cruikshank, Dale P and DeVincenzi, Donald L
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Astronomy - Abstract
Centaurs are objects in unstable orbits that cross the orbits of the giant planets. They are presumed to be recent additions to the planetary zone of the Solar System, having been dynamically perturbed from the Kulper Disk by the gravitational action of Neptune. Telescopic observations of Centaurs are important because they give us a view of the composition (and in some cases cometary activity) of large bodies that are normally to far from the Sun to be studied in detail. This paper reports on physical observations, primarily through spectroscopy, of the compositions of a small number of Centaurs that have been studied to date. In particular, the composition of 5145 Pholus is reviewed, following the published work of Crulkshank et al., in which compositional models that fit the spectrum well included H2O ice, the organic solid Titan tholin, a light hydrocarbon ice (e.g., CH3OH), the silicate mineral olivine, and amorphous carbon. The Centaur 1997 CU(26) shows evidence for H2O ice, but nothing else is yet identified.
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- 2001
22. Spectroscopy of Cosmic Carbon Analogs in Inert-Gas Matrices and in the Gas-Phase: Comparative Results and Perspectives for Astrophysics
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Salama, Farid and DeVincenzi, Donald L
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Astrophysics - Abstract
Recent studies of the spectroscopy of large (up to approx. 50 carbon atoms) neutral and Ionized polycyclic aromatic hydrocarbons (PAHs) and Fullerenes isolated in inert gas matrices will be presented. The advantages and the limitations of matrix isolation spectroscopy for the study of the molecular spectroscopy of interstellar dust analogs will be discussed. The laboratory data will be compared to the astronomical spectra (the interstellar extinction, the diffuse interstellar bands). Finally, the spectra of PAH ions isolated in neon/argon matrices will be compared to the spectra obtained for PAH ion seeded in a supersonic expansion. The astrophysical implications and future perspectives will be discussed.
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- 2001
23. Forecast for the Remainder of the Leonid Storm Season
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Jenniskens, Peter and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
The dust trails of comet 55P/Tempel-Tuttle lead to Leonid storms on Earth, threatening satellites in orbit. We present a new model that accounts in detail for the observed properties of dust tails evolved by the comet at previous oppositions. The prediction model shows the 1767-dust trail closer to Earth's orbit in 2001 than originally thought; increasing expected peak rates for North America observers. Predictions for the 2002 storms are less affected. We demonstrate that the observed shower profiles can be understood as a projection of the comet lightcurve.
- Published
- 2001
24. Mars Sample Handling Protocol Workshop Series: Workshop 4
- Author
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Race Margaret S, DeVincenzi, Donald L, Rummel, John D, and Acevedo, Sara E
- Subjects
Exobiology - Abstract
In preparation for missions to Mars that will involve the return of samples to Earth, it will be necessary to prepare for the receiving, handling, testing, distributing, and archiving of martian materials here on Earth. Previous groups and committees have studied selected aspects of sample return activities, but specific detailed protocols for the handling and testing of returned samples must still be developed. To further refine the requirements for sample hazard testing and to develop the criteria for subsequent release of sample materials from quarantine, the NASA Planetary Protection Officer convened a series of workshops in 2000-2001. The overall objective of the Workshop Series was to produce a Draft Protocol by which returned martian sample materials can be assessed for biological hazards and examined for evidence of life (extant or extinct) while safeguarding the purity of the samples from possible terrestrial contamination. This report also provides a record of the proceedings of Workshop 4, the final Workshop of the Series, which was held in Arlington, Virginia, June 5-7, 2001. During Workshop 4, the sub-groups were provided with a draft of the protocol compiled in May 2001 from the work done at prior Workshops in the Series. Then eight sub-groups were formed to discuss the following assigned topics: Review and Assess the Draft Protocol for Physical/Chemical Testing Review and Assess the Draft Protocol for Life Detection Testing Review and Assess the Draft Protocol for Biohazard Testing Environmental and Health/Monitoring and Safety Issues Requirements of the Draft Protocol for Facilities and Equipment Contingency Planning for Different Outcomes of the Draft Protocol Personnel Management Considerations in Implementation of the Draft Protocol Draft Protocol Implementation Process and Update Concepts This report provides the first complete presentation of the Draft Protocol for Mars Sample Handling to meet planetary protection needs. This Draft Protocol, which was compiled from deliberations and recommendations from earlier Workshops in the Series, represents a consensus that emerged from the discussions of all the sub-groups assembled over the course of the five Workshops of the Series. These discussions converged on a conceptual approach to sample handling, as well as on specific analytical requirements. Discussions also identified important issues requiring attention, as well as research and development needed for protocol implementation.
- Published
- 2001
25. High Resolution Near-IR Spectroscopy of Protostars With Large Telescopes
- Author
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Greene, Tom and DeVincenzi, Donald L
- Subjects
Chemistry And Materials (General) - Abstract
It is now possible to measure absorption spectra of Class I protostars using D greater than or = 8m telescopes equipped with sensitive cryogenic IR spectrographs. Our latest high-resolution (R approx. 20,000) Keck data reveal that Class I protostars are indeed low-mass stars with dwarf-like features. However, they differ from T Tauri stars in that Class I protostars have much higher IR veilings (tau(sub k) greater than or = 1 - 3+) and they are rotating quickly, v sin i greater than 20 km/s. Interestingly, the vast majority of protostellar absorption spectra show stellar - not disk - absorption features. A preliminary H-R diagram suggests that protostellar photospheres may have different physical structures than T Tauri stars, perhaps due to their higher accretion rates.
- Published
- 2001
26. Simulation of Peptides at Aqueous Interfaces
- Author
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Pohorille, Andrew, Wilson, M, Chipot, C, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
Behavior of peptides at water-membrane interfaces is of great interest in studies on cellular transport and signaling, membrane fusion, and the action of toxins and antibiotics. Many peptides, which exist in water only as random coils, can form sequence-dependent, ordered structures at aqueous interfaces, incorporate into membranes and self-assembly into functional units, such as simple ion channels. Multi -nanosecond molecular dynamics simulations have been carried out to study the mechanism and energetics of interfacial folding of both non-polar and amphiphilic peptides, their insertion into membranes and association into higher-order structures. The simulations indicate that peptides fold non-sequentially, often through a series of amphiphilic intermediates. They further incorporate into the membrane in a preferred direction as folded monomers, and only then aggregate into dimers and, possibly, further into "dimers of dimers".
- Published
- 2001
27. Solid and Gas-Phase Spectroscopy of Cosmic Carbon Analogs: Results and Perspectives
- Author
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Salama, Farid and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
The laboratory studies of interstellar carbon materials analogs (PAHs, Fullerenes, chains) will be discussed with their advantages and limitations from the point of view of the application to astrophysical processes. The discussion will focus on the newest generation of laboratory experiments that has been developed in order to provide a closer simulation of space environments and a better support to space missions. The astrophysical implications and future perspectives will be stressed.
- Published
- 2001
28. How Cyanobacterial Distributions Reveal Flow and Irradiance Conditions of Photosynthetic Biofilm Formation
- Author
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Prufert-Bebout, Lee and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
Microbial life on Earth is enormously abundant at sediment-water interfaces. The fossil record in fact contains abundant evidence of the preservation of life on such surfaces. It is therefore critical to our interpretation of early Earth history, and potentially to history of life on other planets, to be able to recognize life forms at these interfaces. On Earth this life often occurs as organized structures of microbes and their extracellular exudates known as biofilms. When such biofilms occur in areas receiving sunlight photosynthetic biofilms are the dominant form in natural ecosystems due to selective advantage inherent in their ability to utilize solar energy. Cyanobacteria are the dominant phototrophic microbes in most modern and ancient photosynthetic biofilms, microbial mats and stromatolites. Due to their long (3.5 billion year) evolutionary history, this group has extensively diversified resulting in an enormous array of morphologies and physiological abilities. This enormous diversity and specialization results in very specific selection for a particular cyanobacterium in each available photosynthetic niche. Furthermore these organisms can alter their spatial orientation, cell morphology, pigmentation and associations with heterotrophic organisms in order to fine tune their optimization to a given micro-niche. These adaptations can be detected, and if adequate knowledge of the interaction between environmental conditions and organism response is available, the detectable organism response can be used to infer the environmental conditions causing that response. This presentation will detail two specific examples which illustrate this point, Light and water are essential to photosynthesis in cyanobacteria and these organisms have specific detectable behavioural responses to these parameters. We will present cyanobacterial responses to quantified flow and irradiance to demonstrate the interpretative power of distribution and orientation information. This study presents new results, but many such examples are already found in the literature.
- Published
- 2001
29. D1((2)B2g) to D0((2)Au) Fluorescence from the Matrix-Isolated Perylene Cation Following Laser Excitation into the D5(2)B3g) and D2 ((2)B3g) Electronic States
- Author
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Chillier, Xavier D. F, Stone, Bradley M, Joblin, Christine, Salama, Farid, Allamandola, Louis J, and DeVincenzi, Donald L
- Subjects
Atomic And Molecular Physics - Abstract
Fluorescence spectra of the perylene cation, pumped by direct laser excitation via the D(sub 2)((2)B(sub 3g)) (left arrow) D(sub 0)((2)A(sub u)) and D(sub 5)(2)B(sub 3g)) (left arrow) D(sub 0)((2)A(sub u)) transitions, are presented. Direct excitation into the D5 or D2 states is followed by rapid non-radiative relaxation to D1 that, in turn,relaxes radiatively. Excitation spectroscopy across the D(sub 2)((2)B(sub 3g)) (left arrow) D(sub 0)((2)A(sub u)) transition near 730 nm shows that site splitting plays little or no role in determining the spectral substructure in the ion spectra. Tentative assignments for ground state vibrational frequencies are made by comparison of spectral intervals with calculated normal mode frequencies.
- Published
- 2001
30. Proton Transport
- Author
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Pohorille, Andrew and DeVincenzi, Donald L
- Subjects
Atomic And Molecular Physics - Abstract
The transport of protons across membranes is an essential process for both bioenergetics of modern cells and the origins of cellular life. All living systems make use of proton gradients across cell walls to convert environmental energy into a high-energy chemical compound, adenosine triphosphate (ATP), synthesized from adenosine diphosphate. ATP, in turn, is used as a source of energy to drive many cellular reactions. The ubiquity of this process in biology suggests that even the earliest cellular systems were relying on proton gradient for harvesting environmental energy needed to support their survival and growth. In contemporary cells, proton transfer is assisted by large, complex proteins embedded in membranes. The issue addressed in this Study was: how the same process can be accomplished with the aid of similar but much simpler molecules that could have existed in the protobiological milieu? The model system used in the study contained a bilayer membrane made of phospholipid, dimyristoylphosphatidylcholine (DMPC) which is a good model of the biological membranes forming cellular boundaries. Both sides of the bilayer were surrounded by water which simulated the environment inside and outside the cell. Embedded in the membrane was a fragment of the Influenza-A M$_2$ protein and enough sodium counterions to maintain system neutrality. This protein has been shown to exhibit remarkably high rates of proton transport and, therefore, is an excellent model to study the formation of proton gradients across membranes. The Influenza M$_2$ protein is 97 amino acids in length, but a fragment 25 amino acids long. which contains a transmembrane domain of 19 amino acids flanked by three amino acids on each side. is sufficient to transport protons. Four identical protein fragments, each folded into a helix, aggregate to form small channels spanning the membrane. Protons are conducted through a narrow pore in the middle of the channel in response to applied voltage. This channel is large enough to contain water molecules. and is normally filled with water. In analogy to the mechanism of proton transfer in some other channels, it has been postulated that protons are translocated along the network of water molecules filling the pore of the channel. This mechanism, however, must involve an additional important step because the channel contains four histidine amino acid residues, one from each of the helices, which are sufficiently large to occlude the pore and interrupt the water network. The histidine residues ensure channel selectivity by blocking transport of small ions, such as sodium or potassium. They have been also implicated in gating protons due to the ability of each histidine to become positively charged by accepting an additional proton. Two mechanisms of gating have been proposed. In one mechanism, all four histidines acquire an additional proton and, due to repulsion between their positive charges, move away from one another, thus opening the channel. The alternative mechanism relies of the ability of protons to move between different atoms in a molecule (tautomerization). Thus, a proton is captured on one side of the gate while another proton is released from the opposite side, and the molecule returns to the initial state through tautomerization. The simulations were designed to test these two mechanisms. Large-scale, atomic-level molecular dynamics simulations of the channel with the histidine residues in different protonation states revealed that all intermediate states of the system involved in the tautomerization mechanism are structurally stable and the arrangement of water molecules in the channel is conducive to the proton transport. In contrast, in the four-protonated state, postulated to exist in the gate-opening mechanism, the electrostatic repulsion between the histidine residues appears to be so large that the channel loses its structural integrity and one helix moves away from the remaining three. Additional information is contained within the original extended abstract.
- Published
- 2001
31. Dust Trails of SP/Tuttle and the Unusual Outbursts of the Ursid Shower
- Author
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Jenniskens, Peter, Lyytinen, E, deLignie, M. C, Johannink, C, Jobse, K, Schievink, R, Langbroek, M, Koop, M, Gural, P, Wilson, M, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
Halley-type comets tend to have a series of dust trails that remain spatially correlated for extended periods of time, each dating from a specific return of the comet. Encounters with 1 - 9 revolution old individual dust trails of 55P/Tempel-Tuttle have led to well recognized Leonid shower maxim, the peak time of which was well predicted by recent models. Now. we used the same model to calculate the position of dust trails of comet Shuttle, a Halley-type comet in an (approximately) 13.6 year orbit passing just outside of Earth's orbit. We discovered that the meteoroids tend to be trapped in the 14:12 mean motion resonance with Jupiter, while the comet librates in a slightly shorter period orbit around the 13:15 resonance. It takes six centuries to change the orbit enough to intersect Earth's orbit. During that time, the meteoroids and comet separate in mean anomaly by six years. thus explaining the unusual aphelion occurrences of Ursid outbursts. The resonances also prevent dispersion, so that the dust trail encounters (specifically, from dust trails of AD 1378 - 1405) occur only in one year in each orbit. We predicted enhanced activity on December 22, 2000, at around 7:29 and 8:35 UT (universal time) from dust trails dating to the 1405 and 1392 return, respectively. This event was observed from California using video and photographic techniques. At the same time, five Global-MS-Net stations in Finland, Japan and Belgium counted meteors using forward meteor scatter. The outburst peaked at 8:06:07 UT, December 22, at Zenith Hourly Rate (approx.) 90 per hour. The Ursid rates were above half peak intensity during 4.2 hours. This is only the second Halley type comet for which a meteor outburst can be dated to a specific return of the parent comet, and traces their presence back form 9 to at least 45 revolutions of the comet. New orbital elements of Ursid meteoroids are presented. We find that most orbits do scatter around the anticipated positions, confirming the link with comet Shuttle and the epoch of ejection. The 1405 and.1392 dust trails appear to have contributed similar amounts to the activity profile. Some orbits provide a hint of much older debris being present as well. Some of the dispersion in the radiant position may reflect a true variation in inclinations, with two groupings at low and high values, which is not understood at present.
- Published
- 2001
32. Carbonate Globules from Spitsbergen, Norway: Terrestrial Analogs of the Carbonates in Martian Meteorite ALH84001?
- Author
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De, Subarnarek, Bunch, Ted, Treiman, Allan H, Amundsen, Hans E. F, Blake, David F, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
Pleistocene volcanic centers in NW Spitsbergen, Norway host one of the world's richest occurrences of mantle xenoliths. The xenoliths comprise varieties of spinel lherzolites and pyroxenites. Some of these xenoliths (and their host basalts) contain 10-100 micrometer globules of ankedtic-magnesitic carbonates (AMC). In composition, mineralogy and petrology the AMC globules from Spitsbergen are strikingly similar to the carbonate globules in ALH84001. The AMC globules occur within interstitial quenched glass and as fracture fillings, although we have not seen replacement fabrics analogous to carbonate rosettes replacing glass in ALH84001. Siderite/ankerite forms the core of these concentrically zoned globules while rims are predominantly magnesite. Clay minerals can occasionally be found within and around the globules. Aside from the clay minerals, the principal mineralogical difference between the AMCs and the ALH84001 carbonate rosettes is the presence of concentrated zones of nanophase magnetite in the rosettes, notably absent in the AMCs. However, carbonate globules containing nanophase magnetite have been produced inorganically by hydrothermal precipitation of carbonates and subsequent heating. We heated Spitsbergen AMC at 585 C in a reducing atmosphere to determine whether magnetite could be produced. Optical micrographs of the heated Spitsbergen AMC show dark concentric zones within the AMC. High resolution SEM images of those areas reveal 150-200 nm euhedral crystals that exhibit various morphologies including octahedra and elongated prisms. EDS analyses of areas where the crystals occur contain Fe, O, and minor Si, and P. However, the probe integrates over volumes of material, which also include the surrounding matrix. We have begun TEM observations of both the heated and unheated Spitsbergen AMC to characterize the microstructures of the carbonates, establish the presence/absence of magnetite and determine the relationship of the clay minerals to the carbonates and host rock.
- Published
- 2001
33. The AstroBiology Explorer (ABE) MIDEX Mission Concept
- Author
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Ennico, Kimberly, Sandford, Scott, Cox, Sylvia, Ellis, Benton, Gallagher, Dennis, Gautier, Nick, Greene, Thomas, McCreight, Craig, Mills, Gary, Purcell, William, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
The Astrobiology Explorer (ABE) is a MIDEX mission concept under study at NASA's Ames Research Center in collaboration with Ball Aerospace & Technologies, Corp. ABE will conduct IR spectroscopic observations to address important problems in astrobiology, astrochemistry, and astrophysics. The core observational program would make fundamental scientific progress in understanding the distribution, identity, and evolution of ices and organic matter in dense molecular clouds, young forming stellar systems, stellar outflows, the general diffuse ISM, HII regions, Solar System bodies, and external galaxies. The ABE instrument concept includes a 0.6 m aperture Cassegrain telescope and two moderate resolution (R = 2000-3000) spectrographs covering the 2.5-16 micron spectral region. Large format (1024x 1024 pixel or larger) IR detector arrays and bandpass filters will allow each spectrograph to cover an entire octave of spectral range or more per exposure without any moving parts. The telescope will be cooled below 50K by a cryogenic dewar shielded by a sunshade. The detectors will be cooled to approximately 8K. The optimum orbital configuration for achieving the scientific objectives of the ABE mission is a low background, 1 AU Earth driftaway orbit requiring a Delta II launch vehicle. This configuration provides a low thermal background and allows adequate communications bandwidth and good access to the entire sky over the approximate 1-2 year mission lifetime.
- Published
- 2001
34. Models of Protocellular Structure, Function and Evolution
- Author
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New, Michael H, Pohorille, Andrew, Szostak, Jack W, Keefe, Tony, Lanyi, Janos K, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
In the absence of any record of protocells, the most direct way to test our understanding, of the origin of cellular life is to construct laboratory models that capture important features of protocellular systems. Such efforts are currently underway in a collaborative project between NASA-Ames, Harvard Medical School and University of California. They are accompanied by computational studies aimed at explaining self-organization of simple molecules into ordered structures. The centerpiece of this project is a method for the in vitro evolution of protein enzymes toward arbitrary catalytic targets. A similar approach has already been developed for nucleic acids in which a small number of functional molecules are selected from a large, random population of candidates. The selected molecules are next vastly multiplied using the polymerase chain reaction.
- Published
- 2001
35. A Study of Soil and Duricrust Models for Mars
- Author
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Bishop, Janice L and DeVincenzi, Donald L
- Subjects
Lunar And Planetary Science And Exploration - Abstract
This project includes analysis of the Mars Pathfinder soil data (spectral, chemical and magnetic) together with analog materials and the products of laboratory alteration experiments in order to describe possible mechanisms for the formation of soil, duricrust and rock coatings on Mars. Soil analog mixtures have been prepared, characterized and tested through wet/dry cycling experiments for changes in binding and spectroscopic properties that are related to what could be expected for duricrusts on Mars. The smectite-based mixture exhibited significantly greater changes (1) in its binding properties throughout the wet/dry cycling experiments than did the palagonite-based mixture, and (2) in its spectral properties following grinding and resieving of the hardened material than did the palagonite-based mixture.
- Published
- 2001
36. Sugar-Related Organic Compounds in Carbonaceous Meteorites
- Author
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Cooper, G, Kimmich, N, Belisle, W, Sarinana, J, Brabham, K, Garrel, L, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
Sugars and related polyols are critical components of all organisms and may have been necessary for the origin of life. To date, this class of organic compounds had not been definitively identified in meteorites. This study was undertaken to determine if polyols were present in the early Solar System as constituents of carbonaceous meteorites. Results of analyses of the Murchison and Murray meteorites indicate that formaldehyde and sugar chemistry may be responsible for the presence of a variety of polyols. We conclude that polyols were present on the early Earth through delivery by asteroids and possibly comets.
- Published
- 2001
37. Biogeochemical Processes in Microbial Ecosystems
- Author
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DesMarais, David J and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
The hierarchical organization of microbial ecosystems determines process rates that shape Earth's environment, create the biomarker sedimentary and atmospheric signatures of life and define the stage upon which major evolutionary events occurred. In order to understand how microorganisms have shaped the global environment of Earth and potentially, other worlds, we must develop an experimental paradigm that links biogeochemical processes with ever-changing temporal and spatial distributions of microbial population, and their metabolic properties. Photosynthetic microbial mats offer an opportunity to define holistic functionality at the millimeter scale. At the same time, their Biogeochemistry contributes to environmental processes on a planetary scale. These mats are possibly direct descendents of the most ancient biological communities; communities in which oxygenic photosynthesis might have been invented. Mats provide one of the best natural systems to study how microbial populations associate to control dynamic biogeochemical gradients. These are self-sustaining, complete ecosystems in which light energy absorbed over a diel (24 hour) cycle drives the synthesis of spatially-organized, diverse biomass. Tightly-coupled microorganisms in the mat have specialized metabolisms that catalyze transformations of carbon, nitrogen. sulfur, and a host of other elements.
- Published
- 2001
38. Water Ice and Life's Roots in Space
- Author
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Blake, David, Jenniskens, Peter, and DeVincenzi, Donald L
- Subjects
Meteorology And Climatology - Abstract
Nearly three decades ago as Voyager 2 spacecraft raced out of the Solar System. NASA engineers turned its camera arm around (at the request of the American astronomer Carl Sagan) to take a parting snapshot of Earth. Earth's image was a single pale blue pixel, its color caused by the Rayleigh scattering of sunlight in the water of our oceans. Earth is a water planet, and this is the color of life. No matter how far we travel on our planet, no matter how high or deep, if we find liquid water, we find some form of life that manages to survive there. And yet there is a cruel irony. Water in its solid crystalline form is hostile to life. Organisms can roost in geysers, wallow in brine and gulp down acid, but they cowered from ice. The rigid ordering of water molecules in ice crystals expels impurities and tears organic tissue beyond repair. In fact, about the only good thing you can say about ice is that it gets out of the way: Its low density ensures that it floats and leaves the water dwelling creatures in peace. Recent discoveries have caused us to rethink this basic premise. New lines of evidence both observational and experimental - suggest that prebiotic organic compounds are not only comfortable in, but in fact had their origin in a peculiar form of solid water ice that is ubiquitous in interstellar space, but completely absent from Earth. Only recently have we been able to create even submicroscopic quantities of this ice in terrestrial laboratories, yet it constitutes the most abundant form of water in the universe. Interstellar ice is a far cry from the ice we are so familiar with on Earth. This interstellar ice has no crystalline structure, and despite the fact that its temperature is a scant few degrees above absolute zero (where all molecular motion ceases), it is highly reactive and can flow like water when exposed to radiation. It is in fact this ice's similarity to liquid water that allows it to participate in the creation of the very first organic compounds.
- Published
- 2001
39. Prospects for the Detection of Earths Orbiting Other Stars
- Author
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Bourcki, William J, Koch, David G, Jenkins, Jon M, Lissauer, Jack J, Dunham, Edward W, and DeVincenzi, Donald L
- Subjects
Astronomy - Abstract
Extrasolar planets have been detected by timing the radio signals from millisecond pulsars, from Doppler velocity changes in the spectra of main sequence stars, and most recently by the white-light transit of HD209458. Detection of Earth-sized planets in and near the habitable zone of main-sequence stars appears to be extremely difficult, if not impossible, from ground-based observatories because of noise introduced by scintillation and transparency changes in the Earth's atmosphere. To overcome these difficulties, several spaceborne photometric missions have been proposed. The COROT mission is a CNES/ESA mission with a 30 cm aperture telescope that will monitor each of several star fields for five months to find short period planets. The Kepler project is a USA effort designed to monitor 100,000 solar-like stars in a single field of view for a period of four years. The long duration enables the reliable detection of planets with orbital periods from a few days to as long as two years. Thus it should be able to determine the frequency of planets in and near the habitable zone and associate them with stellar spectral types. Canadian and Scandinavian missions are also being developed. This paper compares these missions and discusses their expected contribution to our understanding of the frequency of terrestrial-sized planets around other stars.
- Published
- 2001
40. Photoevaporation of Disks Around Young Stars: Application to Ultracompact HII Regions, Proplyds, and the Solar Nebula
- Author
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Hollenbach, David and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
Young massive stars produce sufficient Lyman continuum photon luminosity to significantly affect the structure and evolution of the accretion disks surrounding them. A nearly static, ionized, isothermal 10' K atmosphere forms above the neutral disk, creating a photoevaporative flow from the outer parts of the disk. The resulting slow (10-50 km/s) ionized outflow, which persists for greater than or approximately 10(exp 5) years for disk masses M(sub d) to approximately 0.3M(sub *), may explain the observational characteristics of many ultracompact HII regions. We compare model results to the observed radio free-free spectra and luminosities of ultracompact HII regions and to the interesting source MWC349, which is observed to produce hydrogen masers. We also apply the results to the early solar nebula to explain the the dispersal of the solar nebula and the differences in hydrogen content in the giant planets. Finally, we model the small bright objects ("proplyds") observed in the Orion Nebula as disks around young, low mass stars which axe externally illuminated by the UV photons from the nearby massive star theta(sup 1)C.
- Published
- 2001
41. Detection of Soluble and Fixed NH4+ in Clay Minerals by DTA and IR Reflectance Spectroscopy : A Potential Tool for Planetary Surface Exploration
- Author
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Janice, Bishop, Banin, A, Mancinelli, R. L, Klovstad, M. R, and DeVincenzi, Donald L
- Subjects
Lunar And Planetary Science And Exploration - Abstract
Nitrogen is an essential element for life. It is the only element among the six major biogenic elements, C, O, S, O, P, H, whose presence in the Martian soil has not been positively and directly established. We describe here a study assessing the ability to detect NH4 in soils by two methods: differential thermal analysis (DTA) and infrared (IR) reflectance spectroscopy. Four standard clay minerals (kaolinite, montmorillonite, illite and attapulgite) and an altered tephra sample from Mauna Kea were treated with NH4 in this study. Samples of the NH4-treated and leached clays were analyzed by DTA and infrared (IR) reflectance spectroscopy to quantify the delectability of soluble and sorbed/fixed NH4. An exotherm at 270-280 C was clearly detected in the DTA curves of NH4-treated (non-leached) samples. This feature is assigned to the thermal decomposition reaction of NH4. Spectral bands observed at 1.56, 2.05, 2.12, 3.06, 3.3, 3.5, 5.7 and 7.0 microns in the reflectance spectra of NH4-treated and leached samples are assigned to the sorbed/fixed ammonium in the clays. The montmorillonite has shown the most intense absorbance due to fixed ammonium among the leached samples in this study, as a result of its high cation sorption capacity. It is concluded that the presence of sorbed or fixed NH4 in clays may be detected by infrared (IR) reflectance or emission spectroscopy. Distinction between soluble and sorbed NH4 may be achieved through the presence or absence of several spectral features assigned to the sorbed NH4 moietyi and, specifically, by use of the 4.2 micrometer feature assigned to solution NH4. Thermal analyses furnish supporting evidence of ammonia in our study through detection of N released at temperatures of 270-330 C. Based on these results it is estimated that IR spectra measured from a rover should be able to detect ammonia if present above 20 mg NH4/g sample in the surface layers. Orbital IR spectra and thermal analyses measured on a rover may be able to detect ammonia in soils as well but at higher abundances. The spectral features at 3.06 and 7.0 microns due to bound NH4 in clays and altered Hawaiian tephra appear to be the most promising for detection by orbital spectrometers. If N species are present on Mars the sedimentary deposits may be the best regions to look for them.
- Published
- 2001
42. Constraints on the Composition of Trojan Asteroid 624 Hektor
- Author
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Cruikshank, Dale P, DalleOre, Cristina M, Roush, Ted L, Geballe, Thomas R, Owen, Tobias C, deBergh, Catherine, Cash, Michael D, Hartmann, William K, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
We present a composite spectrum of Trojan asteroid 624 Hektor, 0.3-3.6 microns, which shows that there is no discernible 3-micron absorption band. Such a band would indicate the presence of OH or H2O- bearing silicate minerals, or macromolecular carbon-rich organic material of the kind seen on the low-albedo hemisphere of Saturn's satellite Iapetus (Owen et al. 2000). The absence of spectral structure is itself indicative of the absence of the nitrogen-rich tholins (which show a distinctive absorption band attributed to N-H). The successful models in this study all incorporate the mineral pyroxene (Mg, Fe SiO3, the composition of hypersthene), which matches the red color of Hektor. Pyroxene is a mafic mineral common in terrestrial and lunar lavas, and is also seen in Main Belt asteroid spectra. An upper limit to the amount of crystalline H20 ice (30-micron grains) in the surface layer of Hektor is 3 weight percent. The upper limit for serpentine, as a representative of hydrous silicates, is much less stringent, at 40 percent, based on the shape of the spectral region around 3 gm. Thus, the spectrum at 3 gm does not preclude the presence of a few weight percent of volatile material in the surface layer of Hektor. All of the models we calculated require elemental carbon to achieve the low geometric albedo that matches Hektor. This carbon could be of organic or inorganic origin. By analogy, other D-type asteroids could achieve their red color, low albedo, and apparent absence of phyllosilicates, from compositions similar to the models presented here.
- Published
- 2001
43. Proton Pumps: Mechanism of Action and Applications
- Author
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Lanyi, Janos K, Pohorille, Andrew, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
Recent progress in understanding molecular structures and mechanisms of action of proton pumps has paved the way to their novel applications in biotechnology. Proton pumps, in particular bacteriorhodopsin and ATP synthases, are capable of continuous, renewable conversion of light to chemical, mechanical or electrical energy, which can be used in macro- or nano-scale devices. The capability of protein systems incorporated into liposomes to generate ATP, which can be further used to drive chemical reactions, and to act as molecular motors has been already demonstrated. Other possible applications of such biochemical devices include targeted drug delivery and biocatalytic re actors. All these devices might prove superior to their inorganic alternatives.
- Published
- 2001
44. Assessment of the Interstellar Processes Leading to Deuterium Enrichment in Meteoritic Organics
- Author
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Sandford, Scott A, Bernstein, Max P, Dworkin, Jason P, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
The presence of isotopic anomalies is the most unequivocal demonstration that meteoritic material contains circumstellar or interstellar components. In the case of organic compounds in meteorites and interplanetary dust particles (IDPs), the most useful isotopic tracer has been deuterium (D). We discuss four processes that are expected to lead to D enrichment in interstellar materials and describe how their unique characteristics can be used to assess their relative importance for the organics in meteorites. These enrichment processes are low temperature gas phase ion-molecule reactions, low temperature gas-grain reactions, gas phase unimolecular photodissociation, and ultraviolet photolysis in D-enriched ice mantles. Each of these processes is expected to be associated with distinct regiochemical signatures (D placement on the product molecules, correlation with specific chemical functionalities, etc.), especially in the molecular population of polycyclic aromatic hydrocarbons (PAHs). We describe these differences and discuss how they may be used to delineate the various interstellar processes that may have contributed to meteoritic D enrichments. We also briefly discuss how these processes may affect the isotopic distributions in C, 0, and N in the same compounds.
- Published
- 2001
45. Possible Ursid Outburst on December 22, 2000
- Author
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Jenniskens, Peter, Lyytinen, Esko, and DeVincenzi, Donald L
- Subjects
Meteorology And Climatology - Abstract
The Ursid shower has broad Filament-type outbursts around the perihelion passage of parent 8P/Tuttle, but also isolated narrow outbursts at aphelion. We calculated Tuttle's dust trail encounters in the same way as for the Leonid showers. We discovered that it takes 6 centuries to change the orbit enough to bring the meteoroids to Earth's orbit. During that time, the meteoroids and comet separate in mean anomaly by 6 years, thus explaining the unusual aphelion occurrences. We predict enhanced activity on December 22, 2000, at around 7:29 LT.
- Published
- 2000
46. The AstroBiology Explorer (ABE) MIDEX Mission
- Author
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Greene, Thomas, Sandford, Scott, Allamandola, Louis, Arno, Roger, Bregman, Jesse, Cox, Sylvia, Davis, Paul, Gonzales, Andrew, Hanel, Robert, Hines, Michael, Hudgins, Douglas, and DeVincenzi, Donald L
- Subjects
Astrophysics - Abstract
The Astrobiology Explorer (ABE) is a Medium-Class Explorer (MIDEX) mission concept currently under study at NASA's Ames Research Center. ABE will conduct infrared (IR) spectroscopic observations with much better sensitivity than Infrared Space Observatory (ISO) or the Stratospheric Observatory for Infrared Astronomy program (SOFIA) in order to address outstanding astrobiologically important problems in astrochemistry as well as important astrophysical investigations. The core observational astrobiology program would make fundamental scientific progress in understanding the cosmic history of molecular carbon, the distribution of organic matter in the diffuse interstellar medium, tracing the chemical history of complex organic molecules in the interstellar medium, and the evolution of organic ices in young planetary systems. The ABE instrument concept includes a 0.5 m aperture Cassegrain telescope and a suite of three moderate resolution (R = 1000 - 4000) spectrographs which cover the entire lambda = 2.5-20 micron spectral region. Use of large format (1024 x 1024 pixel or larger) IR detector arrays will allow each spectrograph to cover an entire octave of spectral range per exposure without any moving parts. The telescope is passively cooled by a sun shade to below 65 K, and the detectors are cooled with solid H2 cryogen to approximately 8 K. ABE will be placed in an Earth-trailing one AU solar orbit by a Delta II launch vehicle. This energetically favorable orbit provides a low thermal background, affords good access to the entire sky over the one year mission lifetime, and allows adequate communications bandwidth. The spacecraft will be stabilized in three axes and will be pointed to an accuracy of approximately one arcsecond at ABE's several thousand individual scientific targets.
- Published
- 2000
47. Hydrogen Biogeochemistry in Anaerobic and Photosynthetic Ecosystems
- Author
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Hoehler, Tori M and DeVincenzi, Donald L
- Subjects
Environment Pollution - Abstract
The simple biochemistry of molecular hydrogen is central to a large number of microbial processes, affecting the interaction of organisms with each other and with the environment. In anoxic sediments, a great majority of microbial redox processes involve hydrogen as a reactant, product or potential by-product. Accordingly, the energetics (thermodynamics) of each of these processes is affected by variations in local H2 concentrations. It has long been established that this effect is important in governing microbe-microbe interactions and there are multiple demonstrations that "interspecies hydrogen transfer" can alter the products of, inhibit/stimulate, or even reverse microbial metabolic reactions. In anoxic sediments, H2 concentrations themselves are thought to be controlled by the thermodynamics of the predominant H2-consuming microbial process. In sediments from Cape Lookout Bight, this relationship quantitatively describes the co-variation of H2 concentrations with temperature (for methanogens and sulfate reducers) and with sulfate concentration (for sulfate reducers). The quantitative aspect is import= for two reasons: 1) it permits the modeling of H2-sensitive biogeochemistry, such as anaerobic methane oxidation or pathways of organic matter remineralization, as a function of environmental controls; 2) for such a relationship to be observed requires that intracellular biochemistry and bioenergetics are being directly expressed in a component of the extracellular medium. H2 could therefore be utilized a non-invasive probe of cellular energetic function in intact microbial ecosystems. Based on the latter principle we have measured down-core profiles of H2 and other relevant physico-chemical parameters in order to calculate the metabolic energy yields (DG) that support microbial metabolism in Cape Lookout Bight sediments. Methanogens in this system apparently function with energy yields significantly smaller than the minimum requirements suggested by pure culture studies. Our recent work has extended the study of hydrogen to cyanobacterial mat communities. The large amounts of reducing power generated during photosynthetic activity carry the potential to contribute a swamping term to the H2 economy of the anaerobic microbial populations within the mat - and thereby to alter the population structure and biogeochemical function of the mat as a whole. In hypersaline microbial mats, we observe a distinct diel cycle in H2 production and a substantial corresponding flux. On an early Earth dominated by microbial mats, this transmission of photosynthetic reducing power may have carried important implications for both biospheric and atmospheric evolution.
- Published
- 2000
48. Minimum Energy Requirements for Sustained Microbial Activity in Anoxic Sediments
- Author
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Hoehler, Tori M, Alperin, Marc J, Albert, Daniel B, Martens, Christoper S, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
Currently understood mechanisms of biochemical energy conservation dictate that, in order to be biologically useful, energy must be available to organisms in "quanta" equal to, at minimum one-third to one-fifth of the energy required to synthesize ATP in vivo. The existence of this biological energy quantum means that a significant fraction of the chemical amp on Earth cannot be used to drive biological productivity, and places a fundamental thermodynamic constraint on the origins, evolution, and distribution of life. We examined the energy requirements of intact microbial assemblages in anoxic sediments from Cape Lookout Bight, NC, USA, using dissolved hydrogen concentrations as a non-invasive probe. In this system, the thermodynamics of metabolic processes occurring inside microbial cells is reflected quantitatively by H2 concentrations measured outside those cells. We find that methanogenic archaea are supported by energy yields as small as 10 kJ per mol, about half the quantity calculated from studies of microorganisms in culture. This finding implies that a significantly broader range of geologic and chemical niches might be exploited by microorganisms than would otherwise be expected.
- Published
- 2000
49. Hydrogen Fluxes from Photosynthetic Communities: Implications for Early Earth Biogeochemistry
- Author
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Hoehler, Tori M, Bebout, Brad M, DesMarais, David J, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
More than half the history of life on Earth was dominated by photosynthetic microbial mats, which must have represented the preeminent biological influence on global geochemical cycling during that time. In modem analogs of then ancient communities, hypersaline microbial mats from Guerrero Negro, Mexico, we have observed a large flux of molecular hydrogen originating in the cyanobacteria-dominated surface layers. Hydrogen production follows a distinct diel pattern and is sensitive to both oxygen tension and microbial species composition within the mat. On an early Earth dominated by microbial mats, the observed H2 fluxes would scale to global levels far in excess of geothermal emissions. A hydrogen flux of this magnitude represents a profound transmission of reducing power from oxygenic photosynthesis, both to the anaerobic biosphere, where H2 is an almost universally-utilized substrate and regulator of microbial redox chemistry, and to the atmosphere, where subsequent escape to space could provide an important mechanism for the net oxidation of Earth's surface.
- Published
- 2000
50. Reduced Gas Cycling in Microbial Mats: Implications for Early Earth
- Author
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Hoehler, Tori M, Bebout, Brad M, DesMarais, David J, and DeVincenzi, Donald L
- Subjects
Life Sciences (General) - Abstract
For more than half the history of life on Earth, biological productivity was dominated by photosynthetic microbial mats. During this time, mats served as the preeminent biological influence on earth's surface and atmospheric chemistry and also as the primary crucible for microbial evolution. We find that modern analogs of these ancient mat communities generate substantial quantities of hydrogen, carbon monoxide, and methane. Escape of these gases from the biosphere would contribute strongly to atmospheric evolution and potentially to the net oxidation of earth's surface; sequestration within the biosphere carries equally important implications for the structure, function, and evolution of anaerobic microbial communities within the context of mat biology.
- Published
- 2000
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