30 results on '"Dawit, Haben"'
Search Results
2. Evaluation of adherence to STARD for abstracts in a diverse sample of diagnostic accuracy abstracts published in 2012 and 2019 reveals suboptimal reporting practices
- Author
-
Dubois, Constance, Dawit, Haben, Korevaar, Daniël A., Vali, Yasaman, Al Sibaaie, Alma, Frank, Robert A., McInnes, Matthew D.F., Hyde, Chris, Bossuyt, Patrick M., and Cohen, Jérémie F.
- Published
- 2024
- Full Text
- View/download PDF
3. Sex Differences in Implantation and Outcomes of Cardiac Resynchronization Therapy in Real-World Settings: A Systematic Review of Cohort Studies
- Author
-
Dewidar, Omar, Dawit, Haben, Barbeau, Victoria, Birnie, David, Welch, Vivian, and Wells, George A.
- Published
- 2022
- Full Text
- View/download PDF
4. LI-RADS CT and MRI Ancillary Feature Association with Hepatocellular Carcinoma and Malignancy: An Individual Participant Data Meta-Analysis
- Author
-
Dawit, Haben, primary, Lam, Eric, additional, McInnes, Matthew D. F., additional, van der Pol, Christian B., additional, Bashir, Mustafa R., additional, Salameh, Jean-Paul, additional, Levis, Brooke, additional, Sirlin, Claude B., additional, Chernyak, Victoria, additional, Choi, Sang Hyun, additional, Kim, So Yeon, additional, Fraum, Tyler J., additional, Tang, An, additional, Jiang, Hanyu, additional, Song, Bin, additional, Wang, Jin, additional, Wilson, Stephanie R., additional, Kwon, Heejin, additional, Kierans, Andrea S., additional, Joo, Ijin, additional, Ronot, Maxime, additional, Song, Ji Soo, additional, Podgórska, Joanna, additional, Rosiak, Grzegorz, additional, Kang, Zhen, additional, Allen, Brian C., additional, and Costa, Andreu F., additional
- Published
- 2024
- Full Text
- View/download PDF
5. Best Practice for MRI Diagnostic Accuracy Research With Lessons and Examples from the LI‐RADS Individual Participant Data Group.
- Author
-
van der Pol, Christian B., Costa, Andreu F., Lam, Eric, Dawit, Haben, Bashir, Mustafa R., and McInnes, Matthew D. F.
- Subjects
DIAGNOSTIC imaging ,MAGNETIC resonance imaging ,BEST practices ,DATA integrity ,DIAGNOSIS methods - Abstract
Medical imaging diagnostic test accuracy research is strengthened by adhering to best practices for study design, data collection, data documentation, and study reporting. In this review, key elements of such research are discussed, and specific recommendations provided for optimizing diagnostic accuracy study execution to improve uniformity, minimize common sources of bias and avoid potential pitfalls. Examples are provided regarding study methodology and data collection practices based on insights gained by the liver imaging reporting and data system (LI‐RADS) individual participant data group, who have evaluated raw data from numerous MRI diagnostic accuracy studies for risk of bias and data integrity. The goal of this review is to outline strategies for investigators to improve research practices, and to help reviewers and readers better contextualize a study's findings while understanding its limitations. Level of Evidence: 5 Technical Efficacy: Stage 3 [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
6. Cross-Sectional Evaluation of Open Science Practices at Imaging Journals: A Meta-Research Study
- Author
-
Kashif Al-Ghita, Mohammed, primary, Cobey, Kelly, additional, Moher, David, additional, Leeflang, Mariska M.G., additional, Ebrahimzadeh, Sanam, additional, Lam, Eric, additional, Rooprai, Paul, additional, Khalil, Ahmed Al, additional, Islam, Nabil, additional, Algodi, Hamza, additional, Dawit, Haben, additional, Adamo, Robert, additional, Zeghal, Mahdi, additional, and McInnes, Matthew D.F., additional
- Published
- 2023
- Full Text
- View/download PDF
7. Best Practice for MRI Diagnostic Accuracy Research With Lessons and Examples from the LI‐RADS Individual Participant Data Group
- Author
-
van der Pol, Christian B., primary, Costa, Andreu F., additional, Lam, Eric, additional, Dawit, Haben, additional, Bashir, Mustafa R., additional, and McInnes, Matthew D. F., additional
- Published
- 2023
- Full Text
- View/download PDF
8. Diagnostic Test Accuracy Systematic Reviews: Summarizing the Evidence of Diagnostic Approaches in Cancer-Related Imaging
- Author
-
Dawit, Haben Tesfu
- Subjects
Clear cell renal cell carcinoma ,Diagnostic test accuracy ,Hepatocellular carcinoma ,Systematic review and meta-analysis ,Multi-parametric MRI ,Pre-operative imaging ,Renal mass histology ,Liver Imaging Reporting and Data System ,Ancillary features - Abstract
Systematic reviews on diagnostic test accuracy studies provide an overview of the current literature in a systematic and transparent manner. They are the highest level of evidence in clinical research, therefore they are critical to decision-making in the healthcare setting. Cancer is the primary source of mortality in Canada, however early detection of tumors can improve the survival rates and long-term health outcomes of patients. The primary method of cancer diagnosis is histopathological assessment, however, its use remains controversial. It is an invasive procedure and requires resources and clinical expertise not readily available. Noninvasive clinical imaging has been studied as a clinically desirable method for cancer diagnosis, however its diagnostic accuracy has yet to be established in the medical setting. With the increased role of DTA research in medicine, the current literature needs to be summarized in an effective way to properly educate and influence clinical decision-making. The objective of this thesis is to address the current evidence gaps in DTA research by conducting several systematic reviews to evaluate the accuracy of diagnostic methods in cancer-related imaging. The last chapter of the thesis will provide a critical reflection on the current landscape of DTA studies in cancer-related imaging, based on the findings of the reviews in the thesis.
- Published
- 2023
- Full Text
- View/download PDF
9. Prognostic accuracy of imaging findings for predicting morbidity and mortality in patients with COVID-19
- Author
-
Epi Methoden Team 5, HAG Infectieziekten, Epi Infectieziekten Team 1b, Infection & Immunity, JC onderzoeksprogramma Infectieziekten, Islam, Nayaar, Kashif Al-Ghita, Mohammed, Ebrahimzadeh, Sanam, Dawit, Haben, Prager, Ross, Alvarez, Gonzalo G., Cohen, Jérémie F., Korevaar, Daniël A., Deeks, Jonathan J., Verbakel, Jan Y., Damen, Johanna A.A.G., Ochodo, Eleanor A., Venugopalan Nair, Anirudh, Dinnes, Jacqueline, Dennie, Carole, Van den Bruel, Ann, van de Wijgert, Janneke, Sikora, Lindsey, Spijker, René, Hare, Samanjit S., McInnes, Matthew D.F., Epi Methoden Team 5, HAG Infectieziekten, Epi Infectieziekten Team 1b, Infection & Immunity, JC onderzoeksprogramma Infectieziekten, Islam, Nayaar, Kashif Al-Ghita, Mohammed, Ebrahimzadeh, Sanam, Dawit, Haben, Prager, Ross, Alvarez, Gonzalo G., Cohen, Jérémie F., Korevaar, Daniël A., Deeks, Jonathan J., Verbakel, Jan Y., Damen, Johanna A.A.G., Ochodo, Eleanor A., Venugopalan Nair, Anirudh, Dinnes, Jacqueline, Dennie, Carole, Van den Bruel, Ann, van de Wijgert, Janneke, Sikora, Lindsey, Spijker, René, Hare, Samanjit S., and McInnes, Matthew D.F.
- Published
- 2023
10. Conversion Strategy for LI-RADS Category 5 Observations across Versions 2014, 2017, and 2018
- Author
-
Goins, Stacy M., primary, Adamo, Robert G., additional, Lam, Eric, additional, Costa, Andreu F., additional, van der Pol, Christian B., additional, Salameh, Jean-Paul, additional, Dawit, Haben, additional, McInnes, Matthew D. F., additional, and Bashir, Mustafa R., additional
- Published
- 2023
- Full Text
- View/download PDF
11. How to Critically Appraise and Interpret Systematic Reviews and Meta-Analyses of Diagnostic Accuracy: A User Guide
- Author
-
Frank, Robert A., primary, Salameh, Jean-Paul, additional, Islam, Nayaar, additional, Yang, Bada, additional, Murad, Mohammad Hassan, additional, Mustafa, Reem, additional, Leeflang, Mariska, additional, Bossuyt, Patrick M., additional, Takwoingi, Yemisi, additional, Whiting, Penny, additional, Dawit, Haben, additional, Kang, Stella K., additional, Ebrahimzadeh, Sanam, additional, Levis, Brooke, additional, Hutton, Brian, additional, and McInnes, Matthew D. F., additional
- Published
- 2023
- Full Text
- View/download PDF
12. Is There Evidence of P-Hacking in Imaging Research?
- Author
-
Rooprai, Paul, primary, Islam, Nayaar, additional, Salameh, Jean-Paul, additional, Ebrahimzadeh, Sanam, additional, Kazi, Abrar, additional, Frank, Robert, additional, Ramsay, Tim, additional, Mathur, Maya B., additional, Absi, Marissa, additional, Khalil, Ahmed, additional, Kazi, Sakib, additional, Dawit, Haben, additional, Lam, Eric, additional, Fabiano, Nicholas, additional, and McInnes, Matthew D. F., additional
- Published
- 2022
- Full Text
- View/download PDF
13. Text Mining
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
14. Study Protocol
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
15. raw_data
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
16. Pilot Extraction
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
17. Overall Analysis
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
18. Data
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
19. processed_data
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Published
- 2022
- Full Text
- View/download PDF
20. P-hacking in Imaging Research
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Frank, Robert, Ramsay, Tim, Mathur, Maya, Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Fabiano, Nicholas, and McInnes, Matt
- Subjects
File drawer effect ,P-hacking ,Statistics ,Publication bias ,Text-mining ,P-value ,Evidential value ,Numerical Data ,P-curve ,Medicine and Health Sciences ,Medical Specialties ,FOS: Mathematics ,Radiology ,Data-dredging - Abstract
The tendency to run selective analyses until nonsignificant results become significant (p-hacking) has been observed in many scientific disciplines. Subsequently, statistically significant results may be due to researcher-driven publication bias rather than true effect. The p-curve - a distribution of p-values for a group of studies - has been adopted as a tool to assess the reliability of evidence in various scientific fields. The aim of this study is to assess if p-hacking exists in imaging research.
- Published
- 2022
- Full Text
- View/download PDF
21. Diagnostic Accuracy of MRI for Solid Renal Masses: A Systematic Review and Meta‐analysis
- Author
-
Frank, Robert A., primary, Dawit, Haben, additional, Bossuyt, Patrick M. M., additional, Leeflang, Mariska, additional, Flood, Trevor A., additional, Breau, Rodney H., additional, McInnes, Matthew D. F., additional, and Schieda, Nicola, additional
- Published
- 2022
- Full Text
- View/download PDF
22. Diagnostic Accuracy of MRI for Solid Renal Masses: A Systematic Review and Meta‐analysis.
- Author
-
Frank, Robert A., Dawit, Haben, Bossuyt, Patrick M. M., Leeflang, Mariska, Flood, Trevor A., Breau, Rodney H., McInnes, Matthew D. F., and Schieda, Nicola
- Subjects
DIFFUSION magnetic resonance imaging ,MAGNETIC resonance imaging ,RANDOM effects model ,RENAL cell carcinoma - Abstract
Background: Biparametric (bp)‐MRI and multiparametric (mp)‐MRI may improve the diagnostic accuracy of renal mass histology. Purpose: To evaluate the available evidence on the diagnostic accuracy of bp‐MRI and mp‐MRI for solid renal masses in differentiating malignant from benign, aggressive from indolent, and clear cell renal cell carcinoma (ccRCC) from other histology. Study Type: Systematic review. Population: MEDLINE, EMBASE, and CENTRAL up to January 11, 2022 were searched. Field Strength/Sequence: 1.5 or 3 Tesla. Assessment: Eligible studies evaluated the accuracy of MRI (with at least two sequences: T2, T1, dynamic contrast and diffusion‐weighted imaging) for diagnosis of solid renal masses in adult patients, using histology as reference standard. Risk of bias and applicability were assessed using QUADAS‐2. Statistical Tests: Meta‐analysis using a bivariate logitnormal random effects model. Results: We included 10 studies (1239 masses from approximately 1200 patients). The risk of bias was high in three studies, unclear in five studies and low in two studies. The diagnostic accuracy of malignant (vs. benign) masses was assessed in five studies (64% [179/281] malignant). The summary estimate of sensitivity was 95% (95% confidence interval [CI]: 77%–99%), and specificity was 63% (95% CI: 46%–77%). No study assessed aggressive (vs. indolent) masses. The diagnostic accuracy of ccRCC (vs. other subtypes) was evaluated in six studies (47% [455/971] ccRCC): the summary estimate of sensitivity was 85% (95% CI: 77%–90%) and specificity was 77% (95% CI: 73%–81%). Data Conclusion: Our study reveals deficits in the available evidence on MRI for diagnosis of renal mass histology. The number of studies was limited, at unclear/high risk of bias, with heterogeneous definitions of solid masses, imaging techniques, diagnostic criteria, and outcome measures. Evidence Level: 3 Technical Efficacy: Stage 2 [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
23. Diagnostic accuracy of thoracic imaging modalities for the detection of COVID-19
- Author
-
Dawit, Haben, primary, Absi, Marissa, additional, Islam, Nayaar, additional, Ebrahimzadeh, Sanam, additional, and McInnes, Matthew D F, additional
- Published
- 2022
- Full Text
- View/download PDF
24. PRMT7 methylates eukaryotic translation initiation factor 2α and regulates its role in stress granule formation
- Author
-
Haghandish, Nasim, primary, Baldwin, R. Mitchell, additional, Morettin, Alan, additional, Dawit, Haben Tesfu, additional, Adhikary, Hemanta, additional, Masson, Jean-Yves, additional, Mazroui, Rachid, additional, Trinkle-Mulcahy, Laura, additional, and Côté, Jocelyn, additional
- Published
- 2019
- Full Text
- View/download PDF
25. Cross-Sectional Evaluation of Open Science Practices at Imaging Journals: A Meta-Research Study.
- Author
-
Kashif Al-Ghita, Mohammed, Cobey, Kelly, Moher, David, Leeflang, Mariska M.G., Ebrahimzadeh, Sanam, Lam, Eric, Rooprai, Paul, Khalil, Ahmed Al, Islam, Nabil, Algodi, Hamza, Dawit, Haben, Adamo, Robert, Zeghal, Mahdi, and McInnes, Matthew D.F.
- Subjects
- *
POLICY sciences , *CROSS-sectional method , *MEDICAL protocols , *PEARSON correlation (Statistics) , *MATHEMATICAL variables , *DIAGNOSTIC imaging , *DATA analysis , *DESCRIPTIVE statistics , *MEMBERSHIP , *CHI-squared test , *NEWSLETTERS , *STATISTICS , *DATA analysis software , *OPEN access publishing , *LITERATURE - Abstract
Objective: To evaluate open science policies of imaging journals, and compliance to these policies in published articles. Methods: From imaging journals listed we extracted open science policy details: protocol registration, reporting guidelines, funding, ethics and conflicts of interest (COI), data sharing, and open access publishing. The 10 most recently published studies from each journal were assessed to determine adherence to these policies. We calculated the proportion of open science policies into an Open Science Score (OSS) for all journals and articles. We evaluated relationships between OSS and journal/article level variables. Results: 82 journals/820 articles were included. The OSS of journals and articles was 58.3% and 31.8%, respectively. Of the journals, 65.9% had registration and 78.1% had reporting guideline policies. 79.3% of journals were members of COPE, 81.7% had plagiarism policies, 100% required disclosure of funding, and 97.6% required disclosure of COI and ethics approval. 81.7% had data sharing policies and 15.9% were fully open access. 7.8% of articles had a registered protocol, 8.4% followed a reporting guideline, 77.4% disclosed funding, 88.7% disclosed COI, and 85.6% reported ethics approval. 12.3% of articles shared their data. 51% of articles were available through open access or as a preprint. OSS was higher for journal with DOAJ membership (80% vs 54.2%; P <.0001). Impact factor was not correlated with journal OSS. Knowledge synthesis articles has a higher OSS scores (44.5%) than prospective/retrospective studies (32.6%, 30.0%, P <.0001). Conclusion: Imaging journals endorsed just over half of open science practices considered; however, the application of these practices at the article level was lower. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
26. Is There Evidence of P-Hacking in Imaging Research?
- Author
-
Rooprai, Paul, Islam, Nayaar, Salameh, Jean-Paul, Ebrahimzadeh, Sanam, Kazi, Abrar, Frank, Robert, Ramsay, Tim, Mathur, Maya B., Absi, Marissa, Khalil, Ahmed, Kazi, Sakib, Dawit, Haben, Lam, Eric, Fabiano, Nicholas, and McInnes, Matthew D. F.
- Subjects
- *
STATISTICS , *DESCRIPTIVE statistics , *DATA analysis , *HOSPITAL radiological services , *DATA analysis software , *MEDICAL research , *PROBABILITY theory , *DATA mining - Abstract
Background: P-hacking, the tendency to run selective analyses until they become significant, is prevalent in many scientific disciplines. Purpose: This study aims to assess if p-hacking exists in imaging research. Methods: Protocol, data, and code available here https://osf.io/xz9ku/?view%5fonly=a9f7c2d841684cb7a3616f567db273fa. We searched imaging journals Ovid MEDLINE from 1972 to 2021. Text mining using Python script was used to collect metadata: journal, publication year, title, abstract, and P -values from abstracts. One P -value was randomly sampled per abstract. We assessed for evidence of p-hacking using a p-curve, by evaluating for a concentration of P -values just below.05. We conducted a one-tailed binomial test (α =.05 level of significance) to assess whether there were more P -values falling in the upper range (e.g.,.045 < P <.05) than in the lower range (e.g.,.04 < P <.045). To assess variation in results introduced by our random sampling of a single P -value per abstract, we repeated the random sampling process 1000 times and pooled results across the samples. Analysis was done (divided into 10-year periods) to determine if p-hacking practices evolved over time. Results: Our search of 136 journals identified 967,981 abstracts. Text mining identified 293,687 P -values, and a total of 4105 randomly sampled P -values were included in the p-hacking analysis. The number of journals and abstracts that were included in the analysis as a fraction and percentage of the total number was, respectively, 108/136 (80%) and 4105/967,981 (.4%). P-values did not concentrate just under.05; in fact, there were more P -values falling in the lower range (e.g.,.04 < P <.045) than falling just below.05 (e.g.,.045 < P <.05), indicating lack of evidence for p-hacking. Time trend analysis did not identify p-hacking in any of the five 10-year periods. Conclusion: We did not identify evidence of p-hacking in abstracts published in over 100 imaging journals since 1972. These analyses cannot detect all forms of p-hacking, and other forms of bias may exist in imaging research such as publication bias and selective outcome reporting. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
27. Do Risk Factors for HCC Impact the Association of CT/MRI LIRADS Major Features With HCC? An Individual Participant Data Meta-Analysis.
- Author
-
Adamo RG, Lam E, Salameh JP, van der Pol CB, Goins SM, Dawit H, Costa AF, Levis B, Singal AG, Chernyak V, Sirlin CB, Bashir MR, Tang A, Alhasan A, Allen BC, Reiner CS, Clarke C, Ludwig DR, Cerny M, Wang J, Hyun Choi S, Fraum TJ, Song B, Joo I, Yeon Kim S, Kwon H, Jiang H, Kang HJ, Kierans AS, Kim YY, Ronot M, Podgórska J, Rosiak G, Soo Song J, and McInnes MDF
- Abstract
Background: Guidelines suggest the Liver Imaging Reporting and Data System (LI-RADS) may not be applicable for some populations at risk for hepatocellular carcinoma (HCC). However, data assessing the association of HCC risk factors with LI-RADS major features are lacking. Purpose: To evaluate whether the association between HCC risk factors and each CT/MRI LI-RADS major feature differs among individuals at-risk for HCC. Methods: Databases (MEDLINE, Embase, Cochrane Central Register of Controlled Trials, and Scopus) were searched from 2014 to 2022. Individual participant data (IPD) were extracted from studies evaluating HCC diagnosis using CT/MRI LI-RADS and reporting HCC risk factors. IPD from studies were pooled and modelled with one-stage meta-regressions. Interactions were assessed between major features and HCC risk factors, including age, sex, cirrhosis, chronic hepatitis B virus (HBV), and study location. A mixed effects model that included the major features, as well as separate models that included interactions between each risk factor and each major feature, were fit. Differences in interactions across levels of each risk factor were calculated using adjusted odds-ratios (ORs), 95% confidence-intervals (CI), and z -tests. Risk of bias was assessed using QUADAS-2. (Protocol: https://osf.io/tdv7j/). Results: Across 23 studies (2958 patients and 3553 observations), the associations between LI-RADS major features and HCC were consistent across several HCC risk factors ( P -value range: .09-.99). A sensitivity analysis among the 4 studies with a low risk of bias did not differ from the primary analysis. Conclusion: The association between CT/MRI LI-RADS major features and HCC risk factors do not significantly differ in individuals at-risk for HCC. These findings suggest that CT/MR LI-RADS should be applied to all patients considered at risk by LI-RADS without modification or exclusions, regardless of the presence or absence of the risk factors evaluated in this study., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared the following potential conflicts of interest with respect to the research, authorship, and/or publication of this article: Amit Singal has served as a consultant or on advisory boards for Genentech, AztraZeneca, Eisai, Exelixis, Bayer, Elevar, Boston Scientific, Sirtex, Histosonics, FujiFilm Medical Sciences, Exact Sciences, Roche, Abbott, Glycotest, Freenome, and GRAIL.
- Published
- 2024
- Full Text
- View/download PDF
28. Assessing Adherence to the PRISMA-DTA Guideline in Diagnostic Test Accuracy Systematic Reviews: A Five-Year Follow-up Analysis.
- Author
-
Salameh JP, Moher D, McGrath TA, Frank RA, Sharifabadi AD, Islam N, Lam E, Adamo R, Dawit H, Kashif Al-Ghita M, Levis B, Thombs BD, Bossuyt PM, and McInnes MDF
- Abstract
Background: We evaluated reporting of diagnostic test accuracy (DTA) systematic reviews using Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA)-DTA and PRISMA-DTA for abstracts., Methods: We searched MEDLINE for recent DTA systematic reviews (September 2023-Mar 2024) to achieve a sample size of 100. Analyses evaluated adherence to PRISMA-DTA (and abstracts), on a per-item basis. Association of reporting with journal, country, impact factor (IF), index-test type, subspecialty area, use of supplemental material, PRISMA citation, word count, and PRISMA adoption was evaluated. Comparison to the baseline evaluation from 2019 was done. Protocol: https://doi.org/10.17605/OSF.IO/P25TE., Results: Overall adherence (n = 100) was 78% (20.3/26.0 items, SD = 2.0) for PRISMA-DTA and 52% (5.7/11.0 items, SD = 1.6) for abstracts. Infrequently reported items (<33% of studies): eligibility criteria, definitions for data extraction, synthesis of results, and characteristics of the included studies. Infrequently reported items in abstracts were characteristics of the included studies, strengths and limitations, and funding. Reporting completeness for full text was minimally higher in studies in higher IF journals [20.7 vs 19.8 items; 95% confidence interval (95%CI) (0.09; 1.77)], as well as studies that cited PRISMA [21.1 vs 20.1 items; 95%CI (0.04; 1.95)], or used supplemental material (20.7 vs 19.2 items; 95%CI (0.63; 2.35)]. Variability in reporting was not associated with author country, journal, abstract word count limitations, PRISMA adoption, structured abstracts, study design, subspecialty, open-access status, or index test. No association with word counts was observed among full text or abstracts. Compared to the baseline evaluation, reporting was improved for full texts [71% to 78%; 95%CI (1.18; 2.26)] but not for abstracts [50% to 52%; 95%CI (-0.20; 0.60)]., Conclusions: Compared to the baseline evaluation published in 2019, we observed modest improved adherence to PRISMA-DTA and no improvement in PRISMA-DTA for abstracts reporting., (© Association for Diagnostics & Laboratory Medicine 2024.)
- Published
- 2024
- Full Text
- View/download PDF
29. Individual Participant Data Meta-Analyses for Diagnostic Accuracy Research: Challenges and Lessons Learned from the LI-RADS IPD Group.
- Author
-
Costa AF, McInnes MDF, van der Pol CB, Lam E, Dawit H, Salameh JP, Levis B, and Bashir MR
- Subjects
- Humans, Data Interpretation, Statistical, Research Subjects, Meta-Analysis as Topic, Carcinoma, Hepatocellular, Liver Neoplasms
- Published
- 2024
- Full Text
- View/download PDF
30. Thoracic imaging tests for the diagnosis of COVID-19.
- Author
-
Ebrahimzadeh S, Islam N, Dawit H, Salameh JP, Kazi S, Fabiano N, Treanor L, Absi M, Ahmad F, Rooprai P, Al Khalil A, Harper K, Kamra N, Leeflang MM, Hooft L, van der Pol CB, Prager R, Hare SS, Dennie C, Spijker R, Deeks JJ, Dinnes J, Jenniskens K, Korevaar DA, Cohen JF, Van den Bruel A, Takwoingi Y, van de Wijgert J, Wang J, Pena E, Sabongui S, and McInnes MD
- Subjects
- Humans, SARS-CoV-2, Sensitivity and Specificity, Tomography, X-Ray Computed, Ultrasonography, COVID-19 diagnostic imaging
- Abstract
Background: Our March 2021 edition of this review showed thoracic imaging computed tomography (CT) to be sensitive and moderately specific in diagnosing COVID-19 pneumonia. This new edition is an update of the review., Objectives: Our objectives were to evaluate the diagnostic accuracy of thoracic imaging in people with suspected COVID-19; assess the rate of positive imaging in people who had an initial reverse transcriptase polymerase chain reaction (RT-PCR) negative result and a positive RT-PCR result on follow-up; and evaluate the accuracy of thoracic imaging for screening COVID-19 in asymptomatic individuals. The secondary objective was to assess threshold effects of index test positivity on accuracy., Search Methods: We searched the COVID-19 Living Evidence Database from the University of Bern, the Cochrane COVID-19 Study Register, The Stephen B. Thacker CDC Library, and repositories of COVID-19 publications through to 17 February 2021. We did not apply any language restrictions., Selection Criteria: We included diagnostic accuracy studies of all designs, except for case-control, that recruited participants of any age group suspected to have COVID-19. Studies had to assess chest CT, chest X-ray, or ultrasound of the lungs for the diagnosis of COVID-19, use a reference standard that included RT-PCR, and report estimates of test accuracy or provide data from which we could compute estimates. We excluded studies that used imaging as part of the reference standard and studies that excluded participants with normal index test results., Data Collection and Analysis: The review authors independently and in duplicate screened articles, extracted data and assessed risk of bias and applicability concerns using QUADAS-2. We presented sensitivity and specificity per study on paired forest plots, and summarized pooled estimates in tables. We used a bivariate meta-analysis model where appropriate., Main Results: We included 98 studies in this review. Of these, 94 were included for evaluating the diagnostic accuracy of thoracic imaging in the evaluation of people with suspected COVID-19. Eight studies were included for assessing the rate of positive imaging in individuals with initial RT-PCR negative results and positive RT-PCR results on follow-up, and 10 studies were included for evaluating the accuracy of thoracic imaging for imagining asymptomatic individuals. For all 98 included studies, risk of bias was high or unclear in 52 (53%) studies with respect to participant selection, in 64 (65%) studies with respect to reference standard, in 46 (47%) studies with respect to index test, and in 48 (49%) studies with respect to flow and timing. Concerns about the applicability of the evidence to: participants were high or unclear in eight (8%) studies; index test were high or unclear in seven (7%) studies; and reference standard were high or unclear in seven (7%) studies. Imaging in people with suspected COVID-19 We included 94 studies. Eighty-seven studies evaluated one imaging modality, and seven studies evaluated two imaging modalities. All studies used RT-PCR alone or in combination with other criteria (for example, clinical signs and symptoms, positive contacts) as the reference standard for the diagnosis of COVID-19. For chest CT (69 studies, 28285 participants, 14,342 (51%) cases), sensitivities ranged from 45% to 100%, and specificities from 10% to 99%. The pooled sensitivity of chest CT was 86.9% (95% confidence interval (CI) 83.6 to 89.6), and pooled specificity was 78.3% (95% CI 73.7 to 82.3). Definition for index test positivity was a source of heterogeneity for sensitivity, but not specificity. Reference standard was not a source of heterogeneity. For chest X-ray (17 studies, 8529 participants, 5303 (62%) cases), the sensitivity ranged from 44% to 94% and specificity from 24 to 93%. The pooled sensitivity of chest X-ray was 73.1% (95% CI 64. to -80.5), and pooled specificity was 73.3% (95% CI 61.9 to 82.2). Definition for index test positivity was not found to be a source of heterogeneity. Definition for index test positivity and reference standard were not found to be sources of heterogeneity. For ultrasound of the lungs (15 studies, 2410 participants, 1158 (48%) cases), the sensitivity ranged from 73% to 94% and the specificity ranged from 21% to 98%. The pooled sensitivity of ultrasound was 88.9% (95% CI 84.9 to 92.0), and the pooled specificity was 72.2% (95% CI 58.8 to 82.5). Definition for index test positivity and reference standard were not found to be sources of heterogeneity. Indirect comparisons of modalities evaluated across all 94 studies indicated that chest CT and ultrasound gave higher sensitivity estimates than X-ray (P = 0.0003 and P = 0.001, respectively). Chest CT and ultrasound gave similar sensitivities (P=0.42). All modalities had similar specificities (CT versus X-ray P = 0.36; CT versus ultrasound P = 0.32; X-ray versus ultrasound P = 0.89). Imaging in PCR-negative people who subsequently became positive For rate of positive imaging in individuals with initial RT-PCR negative results, we included 8 studies (7 CT, 1 ultrasound) with a total of 198 participants suspected of having COVID-19, all of whom had a final diagnosis of COVID-19. Most studies (7/8) evaluated CT. Of 177 participants with initially negative RT-PCR who had positive RT-PCR results on follow-up testing, 75.8% (95% CI 45.3 to 92.2) had positive CT findings. Imaging in asymptomatic PCR-positive people For imaging asymptomatic individuals, we included 10 studies (7 CT, 1 X-ray, 2 ultrasound) with a total of 3548 asymptomatic participants, of whom 364 (10%) had a final diagnosis of COVID-19. For chest CT (7 studies, 3134 participants, 315 (10%) cases), the pooled sensitivity was 55.7% (95% CI 35.4 to 74.3) and the pooled specificity was 91.1% (95% CI 82.6 to 95.7)., Authors' Conclusions: Chest CT and ultrasound of the lungs are sensitive and moderately specific in diagnosing COVID-19. Chest X-ray is moderately sensitive and moderately specific in diagnosing COVID-19. Thus, chest CT and ultrasound may have more utility for ruling out COVID-19 than for differentiating SARS-CoV-2 infection from other causes of respiratory illness. The uncertainty resulting from high or unclear risk of bias and the heterogeneity of included studies limit our ability to confidently draw conclusions based on our results., (Copyright © 2022 The Authors. Cochrane Database of Systematic Reviews published by John Wiley & Sons, Ltd. on behalf of The Cochrane Collaboration.)
- Published
- 2022
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.