468 results on '"Davidson, Alice"'
Search Results
2. Characterisation of ASD traits among a cohort of children with isolated fetal ventriculomegaly
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Kyriakopoulou, Vanessa, Davidson, Alice, Chew, Andrew, Gupta, Nidhi, Arichi, Tomoki, Nosarti, Chiara, and Rutherford, Mary A.
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- 2023
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3. Lisch Epithelial Corneal Dystrophy Is Caused by Heterozygous Loss-of-Function Variants in MCOLN1
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Patterson, Karynne, Chong, Jessica X., Chung, Doug D., Lisch, Walter, Karp, Carol L., Dreisler, Erling, Lockington, David, Rohrbach, Jens M., Garczarczyk-Asim, Dorota, Müller, Thomas, Tuft, Stephen J., Skalicka, Pavlina, Wilnai, Yael, Samra, Nadra Naser, Ibrahim, Ali, Mandel, Hanna, Davidson, Alice E., Liskova, Petra, Aldave, Anthony J., Bamshad, Michael J., and Janecke, Andreas R.
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- 2024
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4. A multi-ethnic genome-wide association study implicates collagen matrix integrity and cell differentiation pathways in keratoconus.
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Hardcastle, Alison J, Liskova, Petra, Bykhovskaya, Yelena, McComish, Bennet J, Davidson, Alice E, Inglehearn, Chris F, Li, Xiaohui, Choquet, Hélène, Habeeb, Mahmoud, Lucas, Sionne EM, Sahebjada, Srujana, Pontikos, Nikolas, Lopez, Karla E Rojas, Khawaja, Anthony P, Ali, Manir, Dudakova, Lubica, Skalicka, Pavlina, Van Dooren, Bart TH, Geerards, Annette JM, Haudum, Christoph W, Faro, Valeria Lo, Tenen, Abi, Simcoe, Mark J, Patasova, Karina, Yarrand, Darioush, Yin, Jie, Siddiqui, Salina, Rice, Aine, Farraj, Layal Abi, Chen, Yii-Der Ida, Rahi, Jugnoo S, Krauss, Ronald M, Theusch, Elisabeth, Charlesworth, Jac C, Szczotka-Flynn, Loretta, Toomes, Carmel, Meester-Smoor, Magda A, Richardson, Andrea J, Mitchell, Paul A, Taylor, Kent D, Melles, Ronald B, Aldave, Anthony J, Mills, Richard A, Cao, Ke, Chan, Elsie, Daniell, Mark D, Wang, Jie Jin, Rotter, Jerome I, Hewitt, Alex W, MacGregor, Stuart, Klaver, Caroline CW, Ramdas, Wishal D, Craig, Jamie E, Iyengar, Sudha K, O'Brart, David, Jorgenson, Eric, Baird, Paul N, Rabinowitz, Yaron S, Burdon, Kathryn P, Hammond, Chris J, Tuft, Stephen J, and Hysi, Pirro G
- Abstract
Keratoconus is characterised by reduced rigidity of the cornea with distortion and focal thinning that causes blurred vision, however, the pathogenetic mechanisms are unknown. It can lead to severe visual morbidity in children and young adults and is a common indication for corneal transplantation worldwide. Here we report the first large scale genome-wide association study of keratoconus including 4,669 cases and 116,547 controls. We have identified significant association with 36 genomic loci that, for the first time, implicate both dysregulation of corneal collagen matrix integrity and cell differentiation pathways as primary disease-causing mechanisms. The results also suggest pleiotropy, with some disease mechanisms shared with other corneal diseases, such as Fuchs endothelial corneal dystrophy. The common variants associated with keratoconus explain 12.5% of the genetic variance, which shows potential for the future development of a diagnostic test to detect susceptibility to disease.
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- 2021
5. Internal State Language and Resolution Strategies in Preschoolers' Narratives about Sad Experiences
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Davidson, Alice J. and Welliver, Megan E.
- Abstract
The present study explored preschoolers' internal state language and resolution strategies in sad stories that shifted to a positive emotional tone. Fifty-four 3-, 4-, and 5-year-olds attending a laboratory preschool shared stories about 'a time when you were happy/sad.' Stories were audio-recorded, transcribed, and coded for internal state language, emotional tone shift, and resolutions. Consistent with past work, children reported more internal states in sad (v. happy) stories. Children who shifted their sad stories to a positive emotional tone compared to those whose stories remained sad included more emotion talk and cognitive states, and used a variety of resolution strategies. Descriptive analysis suggested that the distribution of strategies differed by age of the child, with 5-year-olds utilising more strategies, and strategies more cognitively complex compared to younger children. Findings provide new insight into the ways preschoolers make meaning out of and resolve sad experiences through personal narratives.
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- 2021
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6. 3D Reconstruction in Canonical Co-ordinate Space from Arbitrarily Oriented 2D Images
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Hou, Benjamin, Khanal, Bishesh, Alansary, Amir, McDonagh, Steven, Davidson, Alice, Rutherford, Mary, Hajnal, Jo V., Rueckert, Daniel, Glocker, Ben, and Kainz, Bernhard
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Computer Science - Computer Vision and Pattern Recognition - Abstract
Limited capture range, and the requirement to provide high quality initialization for optimization-based 2D/3D image registration methods, can significantly degrade the performance of 3D image reconstruction and motion compensation pipelines. Challenging clinical imaging scenarios, which contain significant subject motion such as fetal in-utero imaging, complicate the 3D image and volume reconstruction process. In this paper we present a learning based image registration method capable of predicting 3D rigid transformations of arbitrarily oriented 2D image slices, with respect to a learned canonical atlas co-ordinate system. Only image slice intensity information is used to perform registration and canonical alignment, no spatial transform initialization is required. To find image transformations we utilize a Convolutional Neural Network (CNN) architecture to learn the regression function capable of mapping 2D image slices to a 3D canonical atlas space. We extensively evaluate the effectiveness of our approach quantitatively on simulated Magnetic Resonance Imaging (MRI), fetal brain imagery with synthetic motion and further demonstrate qualitative results on real fetal MRI data where our method is integrated into a full reconstruction and motion compensation pipeline. Our learning based registration achieves an average spatial prediction error of 7 mm on simulated data and produces qualitatively improved reconstructions for heavily moving fetuses with gestational ages of approximately 20 weeks. Our model provides a general and computationally efficient solution to the 2D/3D registration initialization problem and is suitable for real-time scenarios.
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- 2017
7. Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion
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Hou, Benjamin, Alansary, Amir, McDonagh, Steven, Davidson, Alice, Rutherford, Mary, Hajnal, Jo V., Rueckert, Daniel, Glocker, Ben, and Kainz, Bernhard
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Computer Science - Computer Vision and Pattern Recognition - Abstract
This paper aims to solve a fundamental problem in intensity-based 2D/3D registration, which concerns the limited capture range and need for very good initialization of state-of-the-art image registration methods. We propose a regression approach that learns to predict rotation and translations of arbitrary 2D image slices from 3D volumes, with respect to a learned canonical atlas co-ordinate system. To this end, we utilize Convolutional Neural Networks (CNNs) to learn the highly complex regression function that maps 2D image slices into their correct position and orientation in 3D space. Our approach is attractive in challenging imaging scenarios, where significant subject motion complicates reconstruction performance of 3D volumes from 2D slice data. We extensively evaluate the effectiveness of our approach quantitatively on simulated MRI brain data with extreme random motion. We further demonstrate qualitative results on fetal MRI where our method is integrated into a full reconstruction and motion compensation pipeline. With our CNN regression approach we obtain an average prediction error of 7mm on simulated data, and convincing reconstruction quality of images of very young fetuses where previous methods fail. We further discuss applications to Computed Tomography and X-ray projections. Our approach is a general solution to the 2D/3D initialization problem. It is computationally efficient, with prediction times per slice of a few milliseconds, making it suitable for real-time scenarios., Comment: 8 pages, 4 figures, 6 pages supplemental material, currently under review for MICCAI 2017
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- 2017
8. Deciphering novel TCF4-driven mechanisms underlying a common triplet repeat expansion-mediated disease
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Bhattacharyya, Nihar, primary, Chai, Niuzheng, additional, Hafford-Tear, Nathaniel J., additional, Sadan, Amanda N., additional, Szabo, Anita, additional, Zarouchlioti, Christina, additional, Jedlickova, Jana, additional, Leung, Szi Kay, additional, Liao, Tianyi, additional, Dudakova, Lubica, additional, Skalicka, Pavlina, additional, Parekh, Mohit, additional, Moghul, Ismail, additional, Jeffries, Aaron R., additional, Cheetham, Michael E., additional, Muthusamy, Kirithika, additional, Hardcastle, Alison J., additional, Pontikos, Nikolas, additional, Liskova, Petra, additional, Tuft, Stephen J., additional, and Davidson, Alice E., additional
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- 2024
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9. Tissue-Specific Dynamics of TCF4 Triplet Repeat Instability Revealed by Optical Genome Mapping
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Zarouchlioti, Christina, primary, Efthymiou, Stephanie, additional, Fracchini, Stefano, additional, Dominik, Natalia, additional, Bhattacharyya, Nihar, additional, Liu, Siyin, additional, Abreu Costa, Marcos, additional, Szabo, Anita, additional, Sadan, Amanda N, additional, Jun, Albert, additional, Bugiardini, Enrico, additional, Houlden, Henry, additional, Cortese, Andrea, additional, Skalicka, Pavlina, additional, Dudakova, Lubica, additional, Muthusamy, Kirithika, additional, Cheetham, Michael E, additional, Hardcastle, Alison J, additional, Liskova, Petra, additional, Tuft, Stephen J, additional, and Davidson, Alice, additional
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- 2024
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10. PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI
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Alansary, Amir, Kainz, Bernhard, Rajchl, Martin, Murgasova, Maria, Damodaram, Mellisa, Lloyd, David F. A., Davidson, Alice, McDonagh, Steven G., Rutherford, Mary, Hajnal, Joseph V., and Rueckert, Daniel
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Computer Science - Computer Vision and Pattern Recognition ,I.2.10 ,I.4.3 ,D.1.3 - Abstract
In this paper we present a novel method for the correction of motion artifacts that are present in fetal Magnetic Resonance Imaging (MRI) scans of the whole uterus. Contrary to current slice-to-volume registration (SVR) methods, requiring an inflexible anatomical enclosure of a single investigated organ, the proposed patch-to-volume reconstruction (PVR) approach is able to reconstruct a large field of view of non-rigidly deforming structures. It relaxes rigid motion assumptions by introducing a specific amount of redundant information that is exploited with parallelized patch-wise optimization, super-resolution, and automatic outlier rejection. We further describe and provide an efficient parallel implementation of PVR allowing its execution within reasonable time on commercially available graphics processing units (GPU), enabling its use in the clinical practice. We evaluate PVR's computational overhead compared to standard methods and observe improved reconstruction accuracy in presence of affine motion artifacts of approximately 30% compared to conventional SVR in synthetic experiments. Furthermore, we have evaluated our method qualitatively and quantitatively on real fetal MRI data subject to maternal breathing and sudden fetal movements. We evaluate peak-signal-to-noise ratio (PSNR), structural similarity index (SSIM), and cross correlation (CC) with respect to the originally acquired data and provide a method for visual inspection of reconstruction uncertainty. With these experiments we demonstrate successful application of PVR motion compensation to the whole uterus, the human fetus, and the human placenta., Comment: 10 pages, 13 figures, submitted to IEEE Transactions on Medical Imaging. v2: wadded funders acknowledgements to preprint
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- 2016
11. Learning under Distributed Weak Supervision
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Rajchl, Martin, Lee, Matthew C. H., Schrans, Franklin, Davidson, Alice, Passerat-Palmbach, Jonathan, Tarroni, Giacomo, Alansary, Amir, Oktay, Ozan, Kainz, Bernhard, and Rueckert, Daniel
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Computer Science - Computer Vision and Pattern Recognition - Abstract
The availability of training data for supervision is a frequently encountered bottleneck of medical image analysis methods. While typically established by a clinical expert rater, the increase in acquired imaging data renders traditional pixel-wise segmentations less feasible. In this paper, we examine the use of a crowdsourcing platform for the distribution of super-pixel weak annotation tasks and collect such annotations from a crowd of non-expert raters. The crowd annotations are subsequently used for training a fully convolutional neural network to address the problem of fetal brain segmentation in T2-weighted MR images. Using this approach we report encouraging results compared to highly targeted, fully supervised methods and potentially address a frequent problem impeding image analysis research.
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- 2016
12. TCF4-mediated Fuchs endothelial corneal dystrophy: Insights into a common trinucleotide repeat-associated disease
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Fautsch, Michael P., Wieben, Eric D., Baratz, Keith H., Bhattacharyya, Nihar, Sadan, Amanda N., Hafford-Tear, Nathaniel J., Tuft, Stephen J., and Davidson, Alice E.
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- 2021
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13. Mutations in CPAMD8 Cause a Unique Form of Autosomal-Recessive Anterior Segment Dysgenesis
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Cheong, Sek-Shir, Hentschel, Lisa, Davidson, Alice E, Gerrelli, Dianne, Davie, Rebecca, Rizzo, Roberta, Pontikos, Nikolas, Plagnol, Vincent, Moore, Anthony T, Sowden, Jane C, Michaelides, Michel, Snead, Martin, Tuft, Stephen J, and Hardcastle, Alison J
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Biological Sciences ,Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Genetics ,Eye Disease and Disorders of Vision ,Pediatric ,Intellectual and Developmental Disabilities (IDD) ,Clinical Research ,Brain Disorders ,Mental Health ,2.1 Biological and endogenous factors ,Aetiology ,Eye ,Adolescent ,Adult ,Amino Acid Sequence ,Anterior Eye Segment ,Child ,Child ,Preschool ,Complement C3 ,Eye Abnormalities ,Female ,Genes ,Recessive ,Humans ,Male ,Middle Aged ,Mutation ,Trypsin Inhibitor ,Kazal Pancreatic ,Young Adult ,alpha-Macroglobulins ,A2M/C3 ,CPAMD8 ,WES ,anterior segment dysgenesis ,development ,eye ,iris ,lens ,Medical and Health Sciences ,Genetics & Heredity ,Biological sciences ,Biomedical and clinical sciences ,Health sciences - Abstract
Anterior segment dysgeneses (ASDs) comprise a spectrum of developmental disorders affecting the anterior segment of the eye. Here, we describe three unrelated families affected by a previously unclassified form of ASD. Shared ocular manifestations include bilateral iris hypoplasia, ectopia lentis, corectopia, ectropion uveae, and cataracts. Whole-exome sequencing and targeted Sanger sequencing identified mutations in CPAMD8 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8) as the cause of recessive ASD in all three families. A homozygous missense mutation in the evolutionarily conserved alpha-2-macroglobulin (A2M) domain of CPAMD8, c.4351T>C (p. Ser1451Pro), was identified in family 1. In family 2, compound heterozygous frameshift, c.2352_2353insC (p.Arg785Glnfs∗23), and splice-site, c.4549-1G>A, mutations were identified. Two affected siblings in the third family were compound heterozygous for splice-site mutations c.700+1G>T and c.4002+1G>A. CPAMD8 splice-site mutations caused aberrant pre-mRNA splicing in vivo or in vitro. Intriguingly, our phylogenetic analysis revealed rodent lineage-specific CPAMD8 deletion, precluding a developmental expression study in mice. We therefore investigated the spatiotemporal expression of CPAMD8 in the developing human eye. RT-PCR and in situ hybridization revealed CPAMD8 expression in the lens, iris, cornea, and retina early in development, including strong expression in the distal tips of the retinal neuroepithelium that form the iris and ciliary body, thus correlating CPAMD8 expression with the affected tissues. Our study delineates a unique form of recessive ASD and defines a role for CPAMD8, a protein of unknown function, in anterior segment development, implying another pathway for the pathogenicity of ASD.
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- 2016
14. Parental Mental Health in Research; Exploring Parent Experiences of Perinatal Research; a Mixed Methods Study
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Davidson, Alice and Davidson, Alice
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Fetal Ventriculomegaly (VM) is the most common central nervous system abnormality detected during prenatal ultrasound screening. Abnormal findings come as a shock to parents (Kaasen et al., 2017). A recent study shows that developmental delay and traits of autism spectrum disorder (ASD) are associated with fetal VM (Kyriakopoulou et al., 2023). Few studies have assessed women who continue their pregnancy after such a finding (Griffiths et al., 2022; Griffiths et al., 2019; Horsch et al., 2017). Consenting to perinatal research allows access to information, expert attention, and a better understanding of the studied issue and its impact (Lalor & Bedgley, 2006). Perinatal research focuses on the child, so little is known about parents' experiences and support needs. Understanding parental experiences could inform how to provide support during research participation, particularly if they have a child who may have atypical development. (Shen et al., 2017). This current study, “Parental Mental Health in Research”, supplements the little existing knowledge about experiences of having a pregnancy and child with VM and provides empirical and qualitative data which aims to inform clinical and research practice and participant involvement and care in research. This project recruited 18 parents involved in a study that monitored fetal VM neurodevelopment (Kyriakopoulou et al., 2023). This study uses a mixed methodology to find if parents who have a child with VM are more anxious than control participants and if they experience more parent-related stress than controls. It also uses thematic data to further add to the picture of their experience. Results demonstrated higher anxiety in mothers of VM pregnancies than mothers of controls. There was also a strong relationship between parental stress and state anxiety for mothers who had VM in pregnancy but not for controls. Mothers of VM pregnancies felt higher negative emotions during the fetal and neonatal stages of the study
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- 2024
15. "Trying to remain calm...but I do reach my limit sometimes": An exploration of the meaning of gentle parenting.
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Pezalla, Anne E. and Davidson, Alice J.
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EMOTION regulation , *PARENTS , *SATISFACTION , *PARENTING , *SOCIAL media - Abstract
Raising young children has always been hard, but evidence suggests that it may be getting harder. The isolation of the pandemic, the pressures to fulfill exacting parenting standards, and the explosion of "expert" parenting advice on social media have fueled the rise of "gentle parenting," an approach that pivots away from older, discipline-heavy parenting typologies and which promises the development of happier, healthier children. Despite the popularity of gentle parenting, it has received no empirical scrutiny. The current study represents the first systematic investigation of what gentle parenting entails. Data were gathered from a sample (N = 100) of parents of at least one child between the ages of 2 and 7 from the Midwest, Southeast, and Southwest. Approximately half (n = 49) of the sample identified as "gentle parents." Inductive analyses identified this approach as one that emphasizes high levels of parental affection and parents' and children's emotion regulation. Gentle parenting appears to be distinct from other established measures of parenting approaches in its emphasis on boundaries, yet the enactment of those boundaries is not uniform. Overall, gentle parents reported high levels of parenting satisfaction and efficacy, but a subset of gentle parents who were highly critical of themselves reported significantly lower levels of efficacy than the rest of the sample. Statements of parenting uncertainty and burnout were present in over one-third of the gentle parent sample. Implications are discussed for future research and increased support for those who identify as gentle parents. [ABSTRACT FROM AUTHOR]
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- 2024
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16. “Trying to remain calm…but I do reach my limit sometimes”: An exploration of the meaning of gentle parenting
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Pezalla, Anne E, primary and Davidson, Alice, additional
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- 2024
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17. Disruption of OVOL2 Distal Regulatory Elements as a Possible Mechanism Implicated in Corneal Endothelial Dystrophy
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Dudakova, Lubica, primary, Noskova, Lenka, additional, Kmoch, Stanislav, additional, Filipec, Martin, additional, Filous, Ales, additional, Davidson, Alice E., additional, Toulis, Vasileios, additional, Jedlickova, Jana, additional, Skalicka, Pavlina, additional, Hartmannova, Hana, additional, Stranecky, Viktor, additional, Drabova, Jana, additional, Novotna, Drahuse, additional, Havlovicova, Marketa, additional, Sedlacek, Zdenek, additional, and Liskova, Petra, additional
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- 2024
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18. Rare disease gene association discovery from burden analysis of the 100,000 Genomes Project data
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Cipriani, Valentina, primary, Vestito, Letizia, additional, Magavern, Emma F, additional, Jacobsen, Julius OB, additional, Arno, Gavin, additional, Behr, Elijah R, additional, Benson, Katherine A, additional, Bertoli, Marta, additional, Bockenhauer, Detlef, additional, Bowl, Michael R, additional, Burley, Kate, additional, Chan, Li F, additional, Chinnery, Patrick, additional, Conlon, Peter, additional, Costa, Marcos, additional, Davidson, Alice E, additional, Dawson, Sally J, additional, Elhassan, Elhussein, additional, Flanagan, Sarah E, additional, Futema, Marta, additional, Gale, Daniel P, additional, García-Ruiz, Sonia, additional, Corcia, Cecilia Gonzalez, additional, Griffin, Helen R, additional, Hambleton, Sophie, additional, Hicks, Amy R, additional, Houlden, Henry, additional, Houlston, Richard S, additional, Howles, Sarah A, additional, Kleta, Robert, additional, Lekkerkerker, Iris, additional, Lin, Siying, additional, Liskova, Petra, additional, Mitchison, Hannah, additional, Morsy, Heba, additional, Mumford, Andrew D, additional, Newman, William G, additional, Neatu, Ruxandra, additional, O’Toole, Edel A, additional, Ong, Albert CM, additional, Pagnamenta, Alistair T, additional, Rahman, Shamima, additional, Rajan, Neil, additional, Robinson, Peter N, additional, Ryten, Mina, additional, Sadeghi-Alavijeh, Omid, additional, Sayer, John A, additional, Shovlin, Claire L, additional, Taylor, Jenny C, additional, Teltsh, Omri, additional, Tomlinson, Ian, additional, Tucci, Arianna, additional, Turnbull, Clare, additional, van Eerde, Albertien M, additional, Ware, James S, additional, Watts, Laura M, additional, Webster, Andrew R, additional, Westbury, Sarah K, additional, Zheng, Sean L, additional, Caulfield, Mark, additional, and Smedley, Damian, additional
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- 2023
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19. A new paradigm for delivering personalised care: integrating genetics with surgical interventions in BEST1 mutations
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Low, Sancy, Mohamed, Ryian, Davidson, Alice, Papadopoulos, Maria, Grassi, Piergiacomo, Webster, Andrew R., Black, Graeme C., Foster, Paul J., Garway-Heath, David F., and Bloom, Philip A.
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- 2020
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20. CUGC for posterior polymorphous corneal dystrophy (PPCD)
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Davidson, Alice E., Hafford-Tear, Nathaniel J., Dudakova, Lubica, Sadan, Amanda N., Pontikos, Nikolas, Hardcastle, Alison J., Tuft, Stephen J., and Liskova, Petra
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- 2020
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21. Retinal Structure and Function in Achromatopsia Implications for Gene Therapy
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Sundaram, Venki, Wilde, Caroline, Aboshiha, Jonathan, Cowing, Jill, Han, Colin, Langlo, Christopher S, Chana, Ravinder, Davidson, Alice E, Sergouniotis, Panagiotis I, Bainbridge, James W, Ali, Robin R, Dubra, Alfredo, Rubin, Gary, Webster, Andrew R, Moore, Anthony T, Nardini, Marko, Carroll, Joseph, and Michaelides, Michel
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Neurodegenerative ,Eye Disease and Disorders of Vision ,Genetics ,Biomedical Imaging ,Clinical Research ,Neurosciences ,2.1 Biological and endogenous factors ,Aetiology ,Eye ,Adolescent ,Adult ,Child ,Color Vision Defects ,Cross-Sectional Studies ,Cyclic Nucleotide Phosphodiesterases ,Type 6 ,Cyclic Nucleotide-Gated Cation Channels ,Eye Proteins ,Female ,Genetic Association Studies ,Genetic Therapy ,Heterotrimeric GTP-Binding Proteins ,Humans ,Male ,Middle Aged ,Retina ,Tomography ,Optical Coherence ,Visual Acuity ,Visual Field Tests ,Visual Fields ,Young Adult ,Clinical Sciences ,Opthalmology and Optometry ,Public Health and Health Services ,Ophthalmology & Optometry - Abstract
PurposeTo characterize retinal structure and function in achromatopsia (ACHM) in preparation for clinical trials of gene therapy.DesignCross-sectional study.ParticipantsForty subjects with ACHM.MethodsAll subjects underwent spectral domain optical coherence tomography (SD-OCT), microperimetry, and molecular genetic testing. Foveal structure on SD-OCT was graded into 5 distinct categories: (1) continuous inner segment ellipsoid (ISe), (2) ISe disruption, (3) ISe absence, (4) presence of a hyporeflective zone (HRZ), and (5) outer retinal atrophy including retinal pigment epithelial loss. Foveal and outer nuclear layer (ONL) thickness was measured and presence of hypoplasia determined.Main outcome measuresPhotoreceptor appearance on SD-OCT imaging, foveal and ONL thickness, presence of foveal hypoplasia, retinal sensitivity and fixation stability, and association of these parameters with age and genotype.ResultsForty subjects with a mean age of 24.9 years (range, 6-52 years) were included. Disease-causing variants were found in CNGA3 (n = 18), CNGB3 (n = 15), GNAT2 (n = 4), and PDE6C (n = 1). No variants were found in 2 individuals. In all, 22.5% of subjects had a continuous ISe layer at the fovea, 27.5% had ISe disruption, 20% had an absent ISe layer, 22.5% had an HRZ, and 7.5% had outer retinal atrophy. No significant differences in age (P = 0.77), mean retinal sensitivity (P = 0.21), or fixation stability (P = 0.34) across the 5 SD-OCT categories were evident. No correlation was found between age and foveal thickness (P = 0.84) or between age and foveal ONL thickness (P = 0.12).ConclusionsThe lack of a clear association of disruption of retinal structure or function in ACHM with age suggests that the window of opportunity for intervention by gene therapy is wider in some individuals than previously indicated. Therefore, the potential benefit for a given subject is likely to be better predicted by specific measurement of photoreceptor structure rather than simply by age. The ability to directly assess cone photoreceptor preservation with SD-OCT and/or adaptive optics imaging is likely to prove invaluable in selecting subjects for future trials and measuring the trials' impact.
- Published
- 2014
22. Developmental differences in reported speech and internal state language in preschoolers' personal narratives.
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WELLIVER, Megan E., DAVIDSON, Alice J., and MCCRARY, Alexandra
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The present study explored developmental differences in preschoolers' use of reported speech and internal state language in personal narratives. Three-, four-, and five-year-olds attending a laboratory preschool shared 204 stories about 'a time when you were happy/sad'. Stories were audio-recorded, transcribed, and coded for reported speech (direct, indirect, narrativized) and internal state language (cognitive states, total emotion terms, unique emotion terms). Personal narratives told by five-year-olds included more cognitive states and more narrativized speech than those told by three- and four-year-olds, even when accounting for children's vocabulary skills, and that reported speech (narrativized, direct) were positively correlated with cognitive state talk. These findings highlight distinct shifts in children's use of cognitive state talk and reported speech in personal narratives told at age five. Associations between reported speech and internal state language are both informed by and support Vygotsky's (1978) fundamental claim that psychological processes are socially mediated by language. [ABSTRACT FROM AUTHOR]
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- 2024
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23. Conflict Narratives in Middle Childhood: The Social, Emotional, and Moral Significance of Story-Sharing
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Walton, Marsha D., Davidson, Alice J., Walton, Marsha D., and Davidson, Alice J.
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"Conflict Narratives in Middle Childhood" presents evidence from twenty years of research, examining nearly 3,000 narratives from 1,600 children in eight settings in two countries about their own experiences with interpersonal conflict. Close readings, combined with systematic analysis of dozens of features of the stories reveal that when children are invited to write or talk about their own conflicts, they produce accounts that are often charming and sometimes heartbreaking, and that always bring to light their social, emotional, and moral development. Children's personal stories about conflict reveal how they create and maintain friendships, how they understand and react to the social aggression that threatens those friendships, and how they understand and cope with physical aggression ranging from the pushing and poking of peers to criminal violence in their neighborhoods or families. Sometimes children describe the efforts of adults to influence their conflicts - efforts they sometimes welcome and sometimes resist. Their stories show them "'taking on" gender and other cultural commitments. We are not just watching children become more and more like us as they move through the elementary school years - we are watching them become the architects of a future we will only see to the extent that we understand their way of making sense.
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- 2017
24. Screening of a Large Cohort of Leber Congenital Amaurosis and Retinitis Pigmentosa Patients Identifies Novel LCA5 Mutations and New Genotype–Phenotype Correlations
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Mackay, Donna S, Borman, Arundhati Dev, Sui, Ruifang, Born, L Ingeborgh, Berson, Eliot L, Ocaka, Louise A, Davidson, Alice E, Heckenlively, John R, Branham, Kari, Ren, Huanan, Lopez, Irma, Maria, Maleeha, Azam, Maleeha, Henkes, Arjen, Blokland, Ellen, Group, LCA5 Study, Andreasson, Sten, Baere, Elfride, Bennett, Jean, Chader, Gerald J, Berger, Wolfgang, Golovleva, Irina, Greenberg, Jacquie, Hollander, Anneke I, Klaver, Caroline CW, Klevering, B Jeroen, Lorenz, Birgit, Preising, Markus N, Ramesar, Raj, Roberts, Lisa, Roepman, Ronald, Rohrschneider, Klaus, Wissinger], Bernd, Qamar, Raheel, Webster, Andrew R, Cremers, Frans PM, Moore, Anthony T, and Koenekoop, Robert K
- Subjects
Eye Disease and Disorders of Vision ,Neurosciences ,Clinical Research ,Genetics ,Neurodegenerative ,Pediatric ,Rare Diseases ,2.1 Biological and endogenous factors ,Aetiology ,Eye ,Adolescent ,Adult ,Alleles ,Child ,Child ,Preschool ,Consanguinity ,Eye Proteins ,Female ,Fluorescein Angiography ,Genetic Association Studies ,Genotype ,Humans ,Infant ,Infant ,Newborn ,Leber Congenital Amaurosis ,Male ,Microtubule-Associated Proteins ,Middle Aged ,Mutation ,Pedigree ,Phenotype ,Retina ,Retinitis Pigmentosa ,Young Adult ,[LCA5 Study Group ,LCA ,LCA5 ,RP ,blindness ,lebercilin ,retinal dystrophy ,Clinical Sciences ,Genetics & Heredity - Abstract
This study was undertaken to investigate the prevalence of sequence variants in LCA5 in patients with Leber congenital amaurosis (LCA), early-onset retinal dystrophy (EORD), and autosomal recessive retinitis pigmentosa (arRP); to delineate the ocular phenotypes; and to provide an overview of all published LCA5 variants in an online database. Patients underwent standard ophthalmic evaluations after providing informed consent. In selected patients, optical coherence tomography (OCT) and fundus autofluorescence imaging were possible. DNA samples from 797 unrelated patients with LCA and 211 with the various types of retinitis pigmentosa (RP) were screened by Sanger sequence analysis of all LCA5 exons and intron/exon junctions. Some LCA patients were prescreened by APEX technology or selected based on homozygosity mapping. In silico analyses were performed to assess the pathogenicity of the variants. Segregation analysis was performed where possible. Published and novel LCA5 variants were collected, amended for their correct nomenclature, and listed in a Leiden Open Variation Database (LOVD). Sequence analysis identified 18 new probands with 19 different LCA5 variants. Seventeen of the 19 LCA5 variants were novel. Except for two missense variants and one splice site variant, all variants were protein-truncating mutations. Most patients expressed a severe phenotype, typical of LCA. However, some LCA subjects had better vision and intact inner segment/outer segment (IS/OS) junctions on OCT imaging. In two families with LCA5 variants, the phenotype was more compatible with EORD with affected individuals displaying preserved islands of retinal pigment epithelium. One of the families with a milder phenotype harbored a homozygous splice site mutation; a second family was found to have a combination of a stop mutation and a missense mutation. This is the largest LCA5 study to date. We sequenced 1,008 patients (797 with LCA, 211 with arRP) and identified 18 probands with LCA5 mutations. Mutations in LCA5 are a rare cause of childhood retinal dystrophy accounting for ∼2% of disease in this cohort, and the majority of LCA5 mutations are likely null. The LCA5 protein truncating mutations are predominantly associated with LCA. However, in two families with the milder EORD, the LCA5 gene analysis revealed a homozygous splice site mutation in one and a stop mutation in combination with a missense mutation in a second family, suggesting that this milder phenotype is due to residual function of lebercilin and expanding the currently known phenotypic spectrum to include the milder early onset RP. Some patients have remaining foveal cone structures (intact IS/OS junctions on OCT imaging) and remaining visual acuities, which may bode well for upcoming treatment trials.
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- 2013
25. Molecular and functional characterisation of wildtype and mutant bestrophin-1 associated with retinal disease
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Davidson, Alice Elizabeth
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616.042 - Abstract
BEST1 encodes bestrophin-1, an integral membrane protein expressed in the basolateral membrane of retinal pigment epithelial (RPE) cells. Bestrophin-1 is hypothesised to function as a calcium-activated chloride channel (CaCC) (Sun et al. 2002) and/or a modulator of voltage-dependant calcium channels (VDCC) (Rosenthal et al. 2006) in the RPE. Mutations in BEST1 have previously been linked to a number of retinal dystrophies including Best disease (Marquardt et al. 1998; Petrukhin et al. 1998), ADVIRC (Yardley et al. 2004) and ARB (Burgess et al. 2008b). The aim of this work was to advance understanding of the spectrum of ocular disorders associated with BEST1 mutations. Novel BEST1 mutations were identified in Best disease and ARB patients. The identification of eleven ARB patients from eight separate families with either proven or presumed biallelic mutations in BEST1 supports previous data that ARB is caused by biallelic mutations in BEST1. The identification of homozygous nonsense mutation in BEST1 in a patient with ARB has greatly strengthened the hypothesis that ARB represents the null bestrophin-1 phenotype in humans. The work presented here also demonstrates that a greater range of retinal dystrophies, including concentric RP and severe early onset retinal dystrophies are associated with mutations in BEST1 expanding the clinical heterogeneity known to be associated with BEST1 mutations. Functional assays have been used to investigate the pathogenic effects of disease-associated BEST1 mutations. Whole-cell patch-clamp analysis has shown that ARB-associated BEST1 mutants inhibit the CaCC activity of wildtype bestrophin-1 to a lesser extent than Best disease-associated mutants, confirming the recessive and dominant inheritance patterns of the two diseases. The study of bestrophin-1 and disease-associated mutants in a polarised cell line reveals that many mutant isoforms have disrupted localisation and stability in vitro. The pathogeniCmechanisms contributing to bestrophinopathies therefore may, in many instances, be attributed to aberrant protein folding, stability and localisation Notably, ARB-associated bestrophin-1 isoforms were shown to be rapidly degraded via a proteasomaldependant mechanism. Rapid degradation of bestrophin-1 isoforms leading to reduced levels of functional bestrophin-1, unable to sustain normal physiological function may explain the loss of function phenotype displayed by ARB patients with biallelic missense mutations in BEST1. In conclusion the data presented here has advanced understanding about the spectrum of retinal dystrophies associated with mutations in BEST1 in addition to elucidating pathogenic mechanism that contribute to the bestrophinopathies.
- Published
- 2010
26. CRISPR/Cas9-targeted enrichment and long-read sequencing of the Fuchs endothelial corneal dystrophy–associated TCF4 triplet repeat
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Hafford-Tear, Nathaniel J., Tsai, Yu-Chih, Sadan, Amanda N., Sanchez-Pintado, Beatriz, Zarouchlioti, Christina, Maher, Geoffrey J., Liskova, Petra, Tuft, Stephen J., Hardcastle, Alison J., Clark, Tyson A., and Davidson, Alice E.
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- 2019
- Full Text
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27. BOUNTI: Brain vOlumetry and aUtomated parcellatioN for 3D feTal MRI
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Uus, Alena U., primary, Kyriakopoulou, Vanessa, additional, Makropoulos, Antonios, additional, Fukami-Gartner, Abi, additional, Cromb, Daniel, additional, Davidson, Alice, additional, Cordero-Grande, Lucilio, additional, Price, Anthony N., additional, Grigorescu, Irina, additional, Williams, Logan Z. J., additional, Robinson, Emma C., additional, Lloyd, David, additional, Pushparajah, Kuberan, additional, Story, Lisa, additional, Hutter, Jana, additional, Counsell, Serena J., additional, Edwards, A. David, additional, Rutherford, Mary A., additional, Hajnal, Joseph V., additional, and Deprez, Maria, additional
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- 2023
- Full Text
- View/download PDF
28. Developmental differences in reported speech and internal state language in preschoolers’ personal narratives
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WELLIVER, Megan E., primary, DAVIDSON, Alice J., additional, and MCCRARY, Alexandra, additional
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- 2023
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29. Fast Fully Automatic Segmentation of the Human Placenta from Motion Corrupted MRI
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Alansary, Amir, Kamnitsas, Konstantinos, Davidson, Alice, Khlebnikov, Rostislav, Rajchl, Martin, Malamateniou, Christina, Rutherford, Mary, Hajnal, Joseph V., Glocker, Ben, Rueckert, Daniel, Kainz, Bernhard, Hutchison, David, Series editor, Kanade, Takeo, Series editor, Kittler, Josef, Series editor, Kleinberg, Jon M., Series editor, Mattern, Friedemann, Series editor, Mitchell, John C., Series editor, Naor, Moni, Series editor, Pandu Rangan, C., Series editor, Steffen, Bernhard, Series editor, Terzopoulos, Demetri, Series editor, Tygar, Doug, Series editor, Weikum, Gerhard, Series editor, Ourselin, Sebastien, editor, Joskowicz, Leo, editor, Sabuncu, Mert R., editor, Unal, Gozde, editor, and Wells, William, editor
- Published
- 2016
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30. Objective assessment of visual attention in toddlerhood
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Braithwaite, Eleanor, primary, Kyriakopoulou, Vanessa, additional, Mason, Luke, additional, Davidson, Alice, additional, Nora, Tusor, additional, Harper, Nicholas, additional, Earl, Megan, additional, Datoo-Partridge, Samira, additional, Young, Alice, additional, Chew, Andrew, additional, Falconer, Shona, additional, Hajnal, Joseph V, additional, Johnson, Mark H, additional, Nosarti, Chiara, additional, Edwards, David, additional, and Jones, Emily JH, additional
- Published
- 2023
- Full Text
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31. Deciphering novel TCF4-driven mechanisms underlying a common triplet repeat expansion-mediated disease
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Bhattacharyya, Nihar, primary, Chai, Niuzheng, additional, Hafford-Tear, Nathaniel J, additional, Sadan, Amanda N, additional, Szabo, Anita, additional, Zarouchlioti, Christina, additional, Jedlickova, Jana, additional, Leung, Szi Kay, additional, Liao, Tianyi, additional, Dudakova, Lubica, additional, Skalicka, Pavlina, additional, Parekh, Mohit, additional, Moghul, Ismail, additional, Jeffries, Aaron R, additional, Cheetham, Michael E, additional, Muthusamy, Kirithika, additional, Hardcastle, Alison J, additional, Pontikos, Nikolas, additional, Liskova, Petra, additional, Tuft, Stephen J, additional, and Davidson, Alice E, additional
- Published
- 2023
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32. Phenotype and genotype of concurrent keratoconus and Fuchs endothelial corneal dystrophy
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Liu, Siyin, primary, Sadan, Amanda N., additional, Muthusamy, Kirithika, additional, Zarouchlioti, Christina, additional, Jedlickova, Jana, additional, Pontikos, Nikolas, additional, Thaung, Caroline, additional, Hardcastle, Alison J., additional, Netukova, Magdalena, additional, Skalicka, Pavlina, additional, Dudakova, Lubica, additional, Bunce, Catey, additional, Tuft, Stephen J., additional, Davidson, Alice E., additional, and Liskova, Petra, additional
- Published
- 2023
- Full Text
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33. Rare disease gene association discovery from burden analysis of the 100,000 Genomes Project data
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Genetica Groep Van Tintelen, Genetica Klinische Genetica, Cancer, Child Health, Cipriani, Valentina, Vestito, Letizia, Magavern, Emma F, Jacobsen, Julius Ob, Arno, Gavin, Behr, Elijah R, Benson, Katherine A, Bertoli, Marta, Bockenhauer, Detlef, Bowl, Michael R, Burley, Kate, Chan, Li F, Chinnery, Patrick, Conlon, Peter, Costa, Marcos, Davidson, Alice E, Dawson, Sally J, Elhassan, Elhussein, Flanagan, Sarah E, Futema, Marta, Gale, Daniel P, García-Ruiz, Sonia, Corcia, Cecilia Gonzalez, Griffin, Helen R, Hambleton, Sophie, Hicks, Amy R, Houlden, Henry, Houlston, Richard S, Howles, Sarah A, Kleta, Robert, Lekkerkerker, Iris, Lin, Siying, Liskova, Petra, Mitchison, Hannah, Morsy, Heba, Mumford, Andrew D, Newman, William G, Neatu, Ruxandra, O'Toole, Edel A, Ong, Albert Cm, Pagnamenta, Alistair T, Rahman, Shamima, Rajan, Neil, Robinson, Peter N, Ryten, Mina, Sadeghi-Alavijeh, Omid, Sayer, John A, Shovlin, Claire L, Taylor, Jenny C, Teltsh, Omri, Tomlinson, Ian, Tucci, Arianna, Turnbull, Clare, van Eerde, Albertien M, Ware, James S, Watts, Laura M, Webster, Andrew R, Westbury, Sarah K, Zheng, Sean L, Caulfield, Mark, Smedley, Damian, Genetica Groep Van Tintelen, Genetica Klinische Genetica, Cancer, Child Health, Cipriani, Valentina, Vestito, Letizia, Magavern, Emma F, Jacobsen, Julius Ob, Arno, Gavin, Behr, Elijah R, Benson, Katherine A, Bertoli, Marta, Bockenhauer, Detlef, Bowl, Michael R, Burley, Kate, Chan, Li F, Chinnery, Patrick, Conlon, Peter, Costa, Marcos, Davidson, Alice E, Dawson, Sally J, Elhassan, Elhussein, Flanagan, Sarah E, Futema, Marta, Gale, Daniel P, García-Ruiz, Sonia, Corcia, Cecilia Gonzalez, Griffin, Helen R, Hambleton, Sophie, Hicks, Amy R, Houlden, Henry, Houlston, Richard S, Howles, Sarah A, Kleta, Robert, Lekkerkerker, Iris, Lin, Siying, Liskova, Petra, Mitchison, Hannah, Morsy, Heba, Mumford, Andrew D, Newman, William G, Neatu, Ruxandra, O'Toole, Edel A, Ong, Albert Cm, Pagnamenta, Alistair T, Rahman, Shamima, Rajan, Neil, Robinson, Peter N, Ryten, Mina, Sadeghi-Alavijeh, Omid, Sayer, John A, Shovlin, Claire L, Taylor, Jenny C, Teltsh, Omri, Tomlinson, Ian, Tucci, Arianna, Turnbull, Clare, van Eerde, Albertien M, Ware, James S, Watts, Laura M, Webster, Andrew R, Westbury, Sarah K, Zheng, Sean L, Caulfield, Mark, and Smedley, Damian
- Published
- 2023
34. Autosomal-Dominant Corneal Endothelial Dystrophies CHED1 and PPCD1 Are Allelic Disorders Caused by Non-coding Mutations in the Promoter of OVOL2
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Davidson, Alice E, Liskova, Petra, Evans, Cerys J, Dudakova, Lubica, Noskova, Lenka, Pontikos, Nikolas, Hartmannova, Hana, Hodanova, Katerina, Stranecky, Viktor, Kozmik, Zbynek, Levis, Hannah J, Idigo, Nwamaka, Sasai, Noriaki, Maher, Geoffrey J, Bellingham, James, Veli, Neyme, Ebenezer, Neil D, Cheetham, Michael E, Daniels, Julie T, Thaung, Caroline M.H, Jirsova, Katerina, Plagnol, Vincent, Filipec, Martin, Kmoch, Stanislav, Tuft, Stephen J, Hardcastle, Alison J, Davidson, Alice E, Liskova, Petra, Evans, Cerys J, Dudakova, Lubica, Noskova, Lenka, Pontikos, Nikolas, Hartmannova, Hana, Hodanova, Katerina, Stranecky, Viktor, Kozmik, Zbynek, Levis, Hannah J, Idigo, Nwamaka, Sasai, Noriaki, Maher, Geoffrey J, Bellingham, James, Veli, Neyme, Ebenezer, Neil D, Cheetham, Michael E, Daniels, Julie T, Thaung, Caroline M.H, Jirsova, Katerina, Plagnol, Vincent, Filipec, Martin, Kmoch, Stanislav, Tuft, Stephen J, and Hardcastle, Alison J
- Abstract
Congenital hereditary endothelial dystrophy 1 (CHED1) and posterior polymorphous corneal dystrophy 1 (PPCD1) are autosomal-dominant corneal endothelial dystrophies that have been genetically mapped to overlapping loci on the short arm of chromosome 20. We combined genetic and genomic approaches to identify the cause of disease in extensive pedigrees comprising over 100 affected individuals. After exclusion of pathogenic coding, splice-site, and copy-number variations, a parallel approach using targeted and whole-genome sequencing facilitated the identification of pathogenic variants in a conserved region of the OVOL2 proximal promoter sequence in the index families (c.−339_361dup for CHED1 and c.−370T>C for PPCD1). Direct sequencing of the OVOL2 promoter in other unrelated affected individuals identified two additional mutations within the conserved proximal promoter sequence (c.−274T>G and c.−307T>C). OVOL2 encodes ovo-like zinc finger 2, a C2H2 zinc-finger transcription factor that regulates mesenchymal-to-epithelial transition and acts as a direct transcriptional repressor of the established PPCD-associated gene ZEB1. Interestingly, we did not detect OVOL2 expression in the normal corneal endothelium. Our in vitro data demonstrate that all four mutated OVOL2 promoters exhibited more transcriptional activity than the corresponding wild-type promoter, and we postulate that the mutations identified create cryptic cis-acting regulatory sequence binding sites that drive aberrant OVOL2 expression during endothelial cell development. Our data establish CHED1 and PPCD1 as allelic conditions and show that CHED1 represents the extreme of what can be considered a disease spectrum. They also implicate transcriptional dysregulation of OVOL2 as a common cause of dominantly inherited corneal endothelial dystrophies.
- Published
- 2023
35. Autosomal dominant stromal corneal dystrophy associated with a SPARCL1missense variant
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Braddock, Freddie L., Gardner, Jessica C., Bhattacharyya, Nihar, Sanchez-Pintado, Beatriz, Costa, Marcos, Zarouchlioti, Christina, Szabo, Anita, Lišková, Petra, Cheetham, Michael E., Young, Robert D., Thaung, Caroline, Davidson, Alice E., Tuft, Stephen J., and Hardcastle, Alison J.
- Abstract
Corneal dystrophies are phenotypically and genetically heterogeneous, often resulting in visual impairment caused by corneal opacification. We investigated the genetic cause of an autosomal dominant corneal stromal dystrophy in a pedigree with eight affected individuals in three generations. Affected individuals had diffuse central stromal opacity, with reduced visual acuity in older family members. Histopathology of affected cornea tissue removed during surgery revealed mild stromal textural alterations with alcianophilic deposits. Whole genome sequence data were generated for four affected individuals. No rare variants (MAF < 0.001) were identified in established corneal dystrophy genes. However, a novel heterozygous missense variant in exon 4 of SPARCL1, NM_004684: c.334G > A; p.(Glu112Lys), which is predicted to be damaging, segregated with disease. SPARC-like protein 1 (SPARCL1) is a secreted matricellular protein involved in cell migration, cell adhesion, tissue repair, and remodelling. Interestingly, SPARCL1 has been shown to regulate decorin. Heterozygous variants in DCN, encoding decorin, cause autosomal dominant congenital stromal corneal dystrophy, suggesting a common pathogenic pathway. Therefore, we performed immunohistochemistry to compare SPARCL1 and decorin localisation in corneal tissue from an affected family member and an unaffected control. Strikingly, the level of decorin was significantly decreased in the corneal stroma of the affected tissue, and SPARCL1 appeared to be retained in the epithelium. In summary, we describe a novel autosomal dominant corneal stromal dystrophy associated with a missense variant in SPARCL1, extending the phenotypic and genetic heterogeneity of inherited corneal disease.
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- 2024
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36. Coincidental Occurrence of Schnyder Corneal Dystrophy and Posterior Polymorphous Corneal Dystrophy Type 3
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Dudakova, Lubica, Skalicka, Pavlina, Davidson, Alice E., and Liskova, Petra
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- 2019
- Full Text
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37. Gender (Non)conformity in Middle Childhood: A Mixed Methods Approach to Understanding Gender-Typed Behavior, Friendship, and Peer Preference
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Braun, Summer S. and Davidson, Alice J.
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- 2017
- Full Text
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38. Normative biometry of the fetal brain using magnetic resonance imaging
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Kyriakopoulou, Vanessa, Vatansever, Deniz, Davidson, Alice, Patkee, Prachi, Elkommos, Samia, Chew, Andrew, Martinez-Biarge, Miriam, Hagberg, Bibbi, Damodaram, Mellisa, Allsop, Joanna, Fox, Matt, Hajnal, Joseph V., and Rutherford, Mary A.
- Published
- 2017
- Full Text
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39. 'Im Gonna Tell You All about It': Authorial Voice and Conventional Skills in Writing Assessment and Educational Practice
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Humphrey, Regan C., Walton, Marsha D., and Davidson, Alice J.
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Writing assessments have attended to the mechanics of writing, reflecting a value on the teaching of writing conventions. One quality of writing rarely assessed is authorial voice, a personal style that communicates the author's stance toward events reported and the author's relationship to the audience. The authors explore associations among authorial voice, writing mechanics, and academic performance. In the fall and spring of 1 academic year, 115 third- through fifth-grade students wrote personal narratives that were coded for 2 measures of mechanics and 4 measures of authorial voice. Students and teachers completed measures of academic performance. Mechanics, but not voice, predicted academic performance. The authors suggest that mechanics-focused state standards discourage authorial voice, and they propose attention to voice as a springboard to develop other writing skills.
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- 2014
- Full Text
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40. Repeat Detector: versatile sizing of expanded tandem repeats and identification of interrupted alleles from targeted DNA sequencing
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Taylor, Alysha S, primary, Barros, Dinis, additional, Gobet, Nastassia, additional, Schuepbach, Thierry, additional, McAllister, Branduff, additional, Aeschbach, Lorene, additional, Randall, Emma L, additional, Trofimenko, Evgeniya, additional, Heuchan, Eleanor R, additional, Barszcz, Paula, additional, Ciosi, Marc, additional, Morgan, Joanne, additional, Hafford-Tear, Nathaniel J, additional, Davidson, Alice E, additional, Massey, Thomas H, additional, Monckton, Darren G, additional, Jones, Lesley, additional, network, REGISTRY Investigators of the European Huntington’s disease, additional, Xenarios, Ioannis, additional, and Dion, Vincent, additional
- Published
- 2022
- Full Text
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41. Conflict Narratives in Middle Childhood
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Walton, Marsha D., primary and Davidson, Alice J., additional
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- 2017
- Full Text
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42. Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion
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Hou, Benjamin, primary, Alansary, Amir, additional, McDonagh, Steven, additional, Davidson, Alice, additional, Rutherford, Mary, additional, Hajnal, Jo V., additional, Rueckert, Daniel, additional, Glocker, Ben, additional, and Kainz, Bernhard, additional
- Published
- 2017
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43. Environmental Complexity: Information For Human-Environment Well-Being
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Davidson, Alice Ware, Bar-Yam, Yaneer, Minai, Ali A., editor, and Bar-Yam, Yaneer, editor
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- 2006
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44. Parent/Peer Relationship Patterns among Mexican-Origin Adolescents
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Davidson, Alice J., Updegraff, Kimberly A., and McHale, Susan M.
- Abstract
This study examined patterns of mothers' and fathers' acceptance and youths' friendship intimacy among 246 Mexican-origin 7th graders. Three patterns were identified using mixture modeling: (a) low mother and father acceptance, and average friendship intimacy (Low Parent Profile); (b) average mother acceptance, high father acceptance and friendship intimacy (Positive Profile); and (c) high mother acceptance, average father acceptance, and low friendship intimacy (Low Friend Profile). Profiles differed with respect to cultural characteristics and youth adjustment. Findings demonstrated the benefit of a person-oriented approach to illuminate how parental and peer experiences are connected in different ways for different youth and are linked with youth adjustment. Results highlighted the need for research to attend to the unique cultural experiences of minority youth. (Contains 4 tables.)
- Published
- 2011
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45. Snail Track Lesion with Flat Keratometry in Anterior Segment Dysgenesis Caused by a Novel FOXC1 Variant
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Skalicka, Pavlina, primary, Jedlickova, Jana, additional, Horinek, Ales, additional, Trkova, Marie, additional, Davidson, Alice E., additional, Tuft, Stephen J., additional, Dudakova, Lubica, additional, and Liskova, Petra, additional
- Published
- 2022
- Full Text
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46. Fuchs endothelial corneal dystrophy: current perspectives on diagnostic pathology and genetics—Bowman Club Lecture
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Thaung, Caroline, primary and Davidson, Alice E, additional
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- 2022
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47. Relatedness with Teachers and Peers during Early Adolescence: An Integrated Variable-Oriented and Person-Oriented Approach
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Davidson, Alice J., Gest, Scott D., and Welsh, Janet A.
- Abstract
The primary aims of the present longitudinal study were to examine (a) patterns of early transition relatedness with teachers and peers in 6th grade, (b) whether pre-transition behavior in 5th grade predicted early transition relatedness in 6th grade, and (c) how unique indicators of early transition relatedness with teachers and peers and patterns of early transition relatedness were associated with school adjustment among 383 rural, lower- to middle-class, White youth. Results suggest that behavioral characteristics in elementary school may contribute to early transition patterns of relatedness with teachers and peers in middle school. Findings also indicate that having a pattern of poor relationships with the primary social partners in the school context is negatively associated with adjustment above and beyond the independent indicators of relatedness. Implications for school practice are discussed. (Contains 5 tables and 1 figure.)
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- 2010
- Full Text
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48. Pygmalion in the Program: The Role of Teenage Peer Mentors' Attitudes in Shaping Their Mentees' Outcomes
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Karcher, Michael J., Davidson, Alice J., and Rhodes, Jean E.
- Abstract
Cross-age peer mentoring programs, in which teenagers mentor younger children, have proliferated in recent years, yet there is disagreement about the effectiveness of such programs. This study tested whether teen mentors' attitudes about children interact with their mentees' characteristics to moderate outcomes of cross-age peer mentoring. The sample included 221 high school volunteers, 205 mentees, and 182 control group youth. Latent profile analyses yielded two profiles of students who were labeled "academically connected" or "disconnected." Analyses revealed that the academically disconnected mentees who were paired with mentors holding relatively positive attitudes toward youth were more emotionally engaged in the mentoring relationship (than disconnected mentees with more negative mentors) and, subsequently, reported stronger relationships with their teachers at year's end (than did the similarly disconnected children in the control group). Conversely, there was evidence of iatrogenic effects of matching negative mentors with academically connected mentees. Implications for mentor selection and training are discussed. (Contains 4 tables and 3 figures.)
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- 2010
- Full Text
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49. Clinical and Molecular Analysis of Stargardt Disease With Preserved Foveal Structure and Function
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Fujinami, Kaoru, Sergouniotis, Panagiotis I., Davidson, Alice E., Wright, Genevieve, Chana, Ravinder K., Tsunoda, Kazushige, Tsubota, Kazuo, Egan, Catherine A., Robson, Anthony G., Moore, Anthony T., Holder, Graham E., Michaelides, Michel, and Webster, Andrew R.
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- 2013
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50. A Longitudinal Study of Stargardt Disease: Clinical and Electrophysiologic Assessment, Progression, and Genotype Correlations
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Fujinami, Kaoru, Lois, Noemi, Davidson, Alice E., Mackay, Donna S., Hogg, Chris R., Stone, Edwin M., Tsunoda, Kazushige, Tsubota, Kazuo, Bunce, Catey, Robson, Anthony G., Moore, Anthony T., Webster, Andrew R., Holder, Graham E., and Michaelides, Michel
- Published
- 2013
- Full Text
- View/download PDF
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