154,007 results on '"David, F."'
Search Results
2. Frequency-doubled chirped-pulse dual-comb generation in the near-UV: Combined vs separated beam investigations of Rb atoms near 420 nm
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Stroud, Jasper R. and Plusquellic, David F.
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Physics - Optics - Abstract
We describe an electro-optic dual-comb system that operates in the near-infrared (near-IR) region to generate optical frequency combs in the near-UV by sum frequency generation in two configurations. The near-IR frequency combs are generated using chirped pulses that down convert the optical information into the radio frequency (RF) domain by a difference in the chirp bandwidths. Near (UV) combs at twice the near-IR bandwidth are obtained by sum frequency generation in a nonlinear crystal and detected by a hybrid photon counting detection system. We compare the results of studies of Rb near 420 nm using two optical arrangements where the near-IR combs are mixed in the crystal as combined or as separated beams. While the latter method enables phase retrievals, the combined beam method is superior for phase stability, power throughput for detection, and ease of alignment. High order interleaving enables near-UV bandwidths near 4 cm-1 for faint photonic sensing and spectroscopic applications. The harmonic generation method is easily extendable across much of the titanium sapphire tuning range.
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- 2024
3. Anyonic Braiding in a Chiral Mach-Zehnder Interferometer
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Ghosh, Bikash, Labendik, Maria, Musina, Liliia, Umansky, Vladimir, Heiblum, Moty, and Mross, David F.
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Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
Fractional quantum statistics are a signature prediction of fractional quantum Hall states, which have long been elusive in experiments. Here, we present the observation of anyonic interference and exchange phases in a novel co-propagating 'optical-like' Mach-Zehnder Interferometer. This architecture is free of charging and backscattering effects that often plague the widely used Fabry-Perot interferometer, thus exhibiting pristine Aharonov-Bohm (AB) interference without fractional phase slips. We studied the three lowest Jain filling factors, {\nu}=1/3, 2/5, and 3/7, which host quasiparticles with fractional charges e*=e/3, e/5, and e/7, respectively. The observed AB interference patterns, plotted as a function of magnetic field B and modulation-gate voltage, VMG (known as pajamas), exhibited the expected flux periodicities: 3{\Phi}0, 5{\Phi}0, and 7{\Phi}0, with {\Phi}0 being the flux quantum. A small biased top gate (TG) deposited in the center of the interferometer induces local quasiparticles that are spatially isolated from the interfering modes. At non-zero TG voltage VTG, quantized phase slips appear in the AB pajamas approximately with every flux quantum that pierces the effective area below the TG. Moreover, when tuning VTG, at a constant magnetic field, abrupt phase jumps corresponding to adding one localized quasiparticle at a time under the top gate appear in the B-VTG pajamas.
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- 2024
4. Measurement-free, scalable and fault-tolerant universal quantum computing
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Butt, Friederike, Locher, David F., Brechtelsbauer, Katharina, Büchler, Hans Peter, and Müller, Markus
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Quantum Physics - Abstract
Reliable execution of large-scale quantum algorithms requires robust underlying operations and this challenge is addressed by quantum error correction (QEC). Most modern QEC protocols rely on measurements and feed-forward operations, which are experimentally demanding, and often slow and prone to high error rates. Additionally, no single error-correcting code intrinsically supports the full set of logical operations required for universal quantum computing, resulting in an increased operational overhead. In this work, we present a complete toolbox for fault-tolerant universal quantum computing without the need for measurements during algorithm execution by combining the strategies of code switching and concatenation. To this end, we develop new fault-tolerant, measurement-free protocols to transfer encoded information between 2D and 3D color codes, which offer complementary and in combination universal sets of robust logical gates. We identify experimentally realistic regimes where these protocols surpass state-of-the-art measurement-based approaches. Moreover, we extend the scheme to higher-distance codes by concatenating the 2D color code with itself and by integrating code switching for operations that lack a natively fault-tolerant implementation. Our measurement-free approach thereby provides a practical and scalable pathway for universal quantum computing on state-of-the-art quantum processors., Comment: 16 pages, 9 figures
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- 2024
5. Quantum integration of decay rates at second order in perturbation theory
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de Lejarza, Jorge J. Martínez, Rentería-Estrada, David F., Grossi, Michele, and Rodrigo, Germán
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Quantum Physics ,High Energy Physics - Phenomenology - Abstract
We present the first quantum computation of a total decay rate in high-energy physics at second order in perturbative quantum field theory. This work underscores the confluence of two recent cutting-edge advances. On the one hand, the quantum integration algorithm Quantum Fourier Iterative Amplitude Estimation (QFIAE), which efficiently decomposes the target function into its Fourier series through a quantum neural network before quantumly integrating the corresponding Fourier components. On the other hand, causal unitary in the loop-tree duality (LTD), which exploits the causal properties of vacuum amplitudes in LTD to coherently generate all contributions with different numbers of final-state particles to a scattering or decay process, leading to singularity-free integrands that are well suited for Fourier decomposition. We test the performance of the quantum algorithm with benchmark decay rates in a quantum simulator and in quantum hardware, and find accurate theoretical predictions in both settings., Comment: 6 pages (5+1), 5 figures
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- 2024
6. Discovery of a Bow-Shock Nebula around the Z Cam-type Cataclysmic Variable SY Cancri
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Bond, Howard E., Carter, Calvin, Elmore, David F., Goodhew, Peter, Patchick, Dana, and Talbot, Jonathan
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
We report the serendipitous discovery of a bow-shock nebula around the cataclysmic variable (CV) SY Cancri. In addition, SY Cnc lies near the edge of a faint Halpha-emitting nebula with a diameter of about 15'. The orientation of the bow shock is consistent with the direction of SY Cnc's proper motion. Nebulae are extremely rare around CVs, apart from those known to have undergone classical-nova (CN) outbursts; bow shocks and off-center nebulae are even more unusual. Nevertheless, the properties of SY Cnc and its nebulosity are strikingly similar to those of V341 Ara, another CV that is also associated with a bow shock and is likewise off-center with respect to its faint Halpha nebula. Both stars are binaries with optically thick accretion disks, belonging to the classes of Z Cam CVs or nova-like variables. We discuss three scenarios to explain the properties of the nebulae. They may have resulted from chance encounters with interstellar gas clouds, with the stars leaving in their wakes material that is recombining after being photoionized by UV radiation from the CVs. Alternatively, the large nebulae could be ejecta from unobserved CN outbursts in the recent past, which have been decelerated through collisions with the interstellar medium (ISM), while the stars continue to snowplow through the gas. Or the faint Halpha nebulae may be ambient ISM that was shock-ionized by a CN outburst in the past and is now recombining., Comment: Accepted by The Astronomical Journal
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- 2024
7. Artificial intelligence applied to coronary artery calcium scans (AI-CAC) significantly improves cardiovascular events prediction
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Naghavi, Morteza, Reeves, Anthony P, Atlas, Kyle, Zhang, Chenyu, Atlas, Thomas, Henschke, Claudia I, Yankelevitz, David F, Budoff, Matthew J, Li, Dong, Roy, Sion K, Nasir, Khurram, Molloi, Sabee, Fayad, Zahi, McConnell, Michael V, Kakadiaris, Ioannis, Maron, David J, Narula, Jagat, Williams, Kim, Shah, Prediman K, Levy, Daniel, and Wong, Nathan D
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Health Services and Systems ,Health Sciences ,Atherosclerosis ,Heart Disease ,Prevention ,Machine Learning and Artificial Intelligence ,Heart Disease - Coronary Heart Disease ,Aging ,Bioengineering ,Cardiovascular ,4.2 Evaluation of markers and technologies ,Health services and systems - Abstract
Coronary artery calcium (CAC) scans contain valuable information beyond the Agatston Score which is currently reported for predicting coronary heart disease (CHD) only. We examined whether new artificial intelligence (AI) applied to CAC scans can predict non-CHD events, including heart failure, atrial fibrillation, and stroke. We applied AI-enabled automated cardiac chambers volumetry and calcified plaque characterization to CAC scans (AI-CAC) of 5830 asymptomatic individuals (52.2% women, age 61.7 ± 10.2 years) in the multi-ethnic study of atherosclerosis during 15 years of follow-up, 1773 CVD events accrued. The AUC at 1-, 5-, 10-, and 15-year follow-up for AI-CAC vs. Agatston score was (0.784 vs. 0.701), (0.771 vs. 0.709), (0.789 vs. 0.712) and (0.816 vs. 0.729) (p
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- 2024
8. Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
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Panich, Justin, Toppari, Emili, Tejedor-Sanz, Sara, Fong, Bonnie, Dugan, Eli, Chen, Yan, Petzold, Christopher J, Zhao, Zhiying, Yoshikuni, Yasuo, Savage, David F, and Singer, Steven W
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Plant Biology ,Biological Sciences ,Carbon Dioxide ,Cupriavidus necator ,Bicarbonates ,Carbon Cycle ,Carbonic Anhydrases ,Autotrophic Processes ,Halothiobacillus ,Bacterial Proteins ,Ribulose-Bisphosphate Carboxylase ,C1 metabolism ,Gas fermentation ,Rubisco ,Carbonic anhydrase ,DAB2 ,Biomanufacturing ,Genome engineering ,CRAGE ,CO(2) conversion ,Biotechnology ,Agricultural biotechnology ,Industrial biotechnology ,Microbiology - Abstract
Despite its prominence, the ability to engineer Cupriavidus necator H16 for inorganic carbon uptake and fixation is underexplored. We tested the roles of endogenous and heterologous genes on C. necator inorganic carbon metabolism. Deletion of β-carbonic anhydrase can had the most deleterious effect on C. necator autotrophic growth. Replacement of this native uptake system with several classes of dissolved inorganic carbon (DIC) transporters from Cyanobacteria and chemolithoautotrophic bacteria recovered autotrophic growth and supported higher cell densities compared to wild-type (WT) C. necator in batch culture. Strains expressing Halothiobacillus neopolitanus DAB2 (hnDAB2) and diverse rubisco homologs grew in CO2 similarly to the wild-type strain. Our experiments suggest that the primary role of carbonic anhydrase during autotrophic growth is to support anaplerotic metabolism, and an array of DIC transporters can complement this function. This work demonstrates flexibility in HCO3- uptake and CO2 fixation in C. necator, providing new pathways for CO2-based biomanufacturing.
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- 2024
9. Bosonic Quantum Error Correction with Neutral Atoms in Optical Dipole Traps
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Bohnmann, Leon H., Locher, David F., Zeiher, Johannes, and Müller, Markus
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Quantum Physics - Abstract
Bosonic quantum error correction codes encode logical qubits in the Hilbert space of one or multiple harmonic oscillators. A prominent class of bosonic codes are Gottesman-Kitaev-Preskill (GKP) codes of which implementations have been demonstrated with trapped ions and microwave cavities. In this work, we investigate theoretically the preparation and error correction of a GKP qubit in a vibrational mode of a neutral atom stored in an optical dipole trap. This platform has recently shown remarkable progress in simultaneously controlling the motional and electronic degrees of freedom of trapped atoms. The protocols we develop make use of motional states and, additionally, internal electronic states of the trapped atom to serve as an ancilla qubit. We compare optical tweezer arrays and optical lattices and find that the latter provide more flexible control over the confinement in the out-of-plane direction, which can be utilized to optimize the conditions for the implementation of GKP codes. Concretely, the different frequency scales that the harmonic oscillators in the axial and radial lattice directions exhibit and a small oscillator anharmonicity prove to be beneficial for robust encodings of GKP states. Finally, we underpin the experimental feasibility of the proposed protocols by numerically simulating the preparation of GKP qubits in optical lattices with realistic parameters., Comment: 18 pages, 7 figures
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- 2024
10. AI in radiological imaging of soft-tissue and bone tumours: a systematic review evaluating against CLAIM and FUTURE-AI guidelines
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Spaanderman, Douwe J., Marzetti, Matthew, Wan, Xinyi, Scarsbrook, Andrew F., Robinson, Philip, Oei, Edwin H. G., Visser, Jacob J., Hemke, Robert, van Langevelde, Kirsten, Hanff, David F., van Leenders, Geert J. L. H., Verhoef, Cornelis, Gruühagen, Dirk J., Niessen, Wiro J., Klein, Stefan, and Starmans, Martijn P. A.
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Computer Science - Artificial Intelligence ,Computer Science - Machine Learning - Abstract
Soft-tissue and bone tumours (STBT) are rare, diagnostically challenging lesions with variable clinical behaviours and treatment approaches. This systematic review provides an overview of Artificial Intelligence (AI) methods using radiological imaging for diagnosis and prognosis of these tumours, highlighting challenges in clinical translation, and evaluating study alignment with the Checklist for AI in Medical Imaging (CLAIM) and the FUTURE-AI international consensus guidelines for trustworthy and deployable AI to promote the clinical translation of AI methods. The review covered literature from several bibliographic databases, including papers published before 17/07/2024. Original research in peer-reviewed journals focused on radiology-based AI for diagnosing or prognosing primary STBT was included. Exclusion criteria were animal, cadaveric, or laboratory studies, and non-English papers. Abstracts were screened by two of three independent reviewers for eligibility. Eligible papers were assessed against guidelines by one of three independent reviewers. The search identified 15,015 abstracts, from which 325 articles were included for evaluation. Most studies performed moderately on CLAIM, averaging a score of 28.9$\pm$7.5 out of 53, but poorly on FUTURE-AI, averaging 5.1$\pm$2.1 out of 30. Imaging-AI tools for STBT remain at the proof-of-concept stage, indicating significant room for improvement. Future efforts by AI developers should focus on design (e.g. define unmet clinical need, intended clinical setting and how AI would be integrated in clinical workflow), development (e.g. build on previous work, explainability), evaluation (e.g. evaluating and addressing biases, evaluating AI against best practices), and data reproducibility and availability (making documented code and data publicly available). Following these recommendations could improve clinical translation of AI methods., Comment: 23 pages, 6 figures, 6 supplementary figures
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- 2024
11. Parametric Sensitivity Analysis for Models of Reaction Networks within Interacting Compartments
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Anderson, David F. and Howells, Aidan S.
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Quantitative Biology - Molecular Networks ,Mathematics - Numerical Analysis ,Mathematics - Probability ,Quantitative Biology - Quantitative Methods ,92C40, 60J28, 65C05 - Abstract
Models of reaction networks within interacting compartments (RNIC) are a generalization of stochastic reaction networks. It is most natural to think of the interacting compartments as ``cells'' that can appear, degrade, split, and even merge, with each cell containing an evolving copy of the underlying stochastic reaction network. Such models have a number of parameters, including those associated with the internal chemical model and those associated with the compartment interactions, and it is natural to want efficient computational methods for the numerical estimation of sensitivities of model statistics with respect to these parameters. Motivated by the extensive work on computational methods for parametric sensitivity analysis in the context of stochastic reaction networks over the past few decades, we provide a number of methods in the RNIC setting. Provided methods include the (unbiased) Girsanov transformation method (also called the Likelihood Ratio method) and a number of coupling methods for the implementation of finite differences. We provide several numerical examples and conclude that the method associated with the ``Split Coupling'' provides the most efficient algorithm. This finding is in line with the conclusions from the work related to sensitivity analysis of standard stochastic reaction networks. We have made all of the Matlab code used to implement the various methods freely available for download., Comment: 31 pages, a number of images
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- 2024
12. Anisotropic universe with anisotropic dark energy
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Verma, Anshul, Aluri, Pavan K., and Mota, David F.
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Astrophysics - Cosmology and Nongalactic Astrophysics ,General Relativity and Quantum Cosmology - Abstract
We investigate anisotropic equation of state parameterization of dark energy within the framework of an axisymmetric (planar) Bianchi-I universe. In addition to constraining the equation of state for anisotropic dark energy and other standard cosmological model parameters, we also constrain any underlying anisotropic axis using the latest Pantheon+ Type Ia Supernovae data set augmented by SH0ES Cepheid distance calibrators. The mean anisotropic dark energy equation of state and corresponding difference in the equation of states in and normal to the plane of our axisymmetric Bianchi-I space-time are found to be $\bar{w}=-0.90^{+0.16}_{-0.12}$ and $\delta_w=-0.140^{+0.11}_{-0.082}$ respectively. We also find an axis of anisotropy in this planar Bianchi-I model with anisotropic dark energy to be $\approx(279^{\circ} ,12^{\circ})$ in galactic coordinates. Our analysis of different cosmological models suggests that while a Bianchi-I universe with anisotropic dark energy (the $w_b$CDM model) shows some preference over other anisotropic models, it is still less likely than the standard $\Lambda$CDM model or a model with a constant dark energy equation of state ($w$CDM). Overall, the $\Lambda$CDM model remains the most probable model based on the Akaike Information Criterion., Comment: 12 pages, 6 figures, 2 tables; Comments are welcome
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- 2024
13. Phase diagram of compressible and paired states in the quarter-filled Landau level
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Yutushui, Misha and Mross, David F.
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Condensed Matter - Strongly Correlated Electrons - Abstract
Quantum Hall plateaus at quarter fillings occur in GaAs wide quantum wells, hole-doped GaAs, and bilayer graphene. However, the interactions favoring incompressible states over compressible composite-Fermi liquids at such fillings are not well understood. We devise a method of computing the trial energies for Haldane pseudopotentials via Monte Carlo sampling. Applying it to the quarter-filled lowest Landau level, we find that tuning the third and fifth pseudopotential can stabilize anti-Pfaffian, Moore-Read, and f-wave states. The smallest deviations from pure Coulomb interactions are required by anti-Pfaffian, whose presence is indicated by daughter states in recent experiments of bilayer graphene at $\nu=\frac{3}{4}$., Comment: Page 9+2, Figures 10+2, Tables 0+3
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- 2024
14. Exchange control in a MOS double quantum dot made using a 300 mm wafer process
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Chittock-Wood, Jacob F., Leon, Ross C. C., Fogarty, Michael A., Murphy, Tara, Patomäki, Sofia M., Oakes, Giovanni A., von Horstig, Felix-Ekkehard, Johnson, Nathan, Jussot, Julien, Kubicek, Stefan, Govoreanu, Bogdan, Wise, David F., Gonzalez-Zalba, M. Fernando, and Morton, John J. L.
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Condensed Matter - Mesoscale and Nanoscale Physics ,Quantum Physics - Abstract
Leveraging the advanced manufacturing capabilities of the semiconductor industry promises to help scale up silicon-based quantum processors by increasing yield, uniformity and integration. Recent studies of quantum dots fabricated on 300 mm wafer metal-oxide-semiconductor (MOS) processes have shown control and readout of individual spin qubits, yet quantum processors require two-qubit interactions to operate. Here, we use a 300 mm wafer MOS process customized for spin qubits and demonstrate coherent control of two electron spins using the spin-spin exchange interaction, forming the basis of an entangling gate such as $\sqrt{\text{SWAP}}$. We observe gate dephasing times of up to $T_2^{*}\approx500$ ns and a gate quality factor of 10. We further extend the coherence by up to an order of magnitude using an echo sequence. For readout, we introduce a dispersive readout technique, the radiofrequency electron cascade, that amplifies the signal while retaining the spin-projective nature of dispersive measurements. Our results demonstrate an industrial grade platform for two-qubit operations, alongside integration with dispersive sensing techniques.
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- 2024
15. Automatic Detection and Annotation of Sperm Whale Codas
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Gubnitsky, Guy, Mevorach, Yaly, Gero, Shane, Gruber, David F., and Diamant, Roee
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Electrical Engineering and Systems Science - Audio and Speech Processing ,Computer Science - Sound - Abstract
A key technology in sperm whale (Physeter macrocephalus) monitoring is the identification of sperm whale communication signals, known as codas. In this paper we present the first automatic coda detector and annotator. The main innovation in our detector is graph-based clustering, which utilizes the expected similarity between the clicks that make up the coda. Results show detection and accurate annotation at low signal-to-noise ratios, separation between codas and echolocation clicks, and discrimination between codas from simultaneously emitting whales. Using this automatic annotator, insights into the characterization of sperm whale communication are presented. The results include new types of coda signals, analyzes of the distribution of coda types among different whales and for different years, and evidence for synchronization between communicating whales in terms of coda type and coda transmission time. These results indicate a high degree of complexity in the communication system of this cetacean species. To ensure traceability, we share the implementation code of our coda detector.
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- 2024
16. Quantum Frequency Mixing using an NV Diamond Microscope
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Karlson, Samuel J., Kehayias, Pauli, Schloss, Jennifer M., Maccabe, Andrew C., Phillips, David F., Wang, Guoqing, Cappellaro, Paola, and Braje, Danielle A.
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Physics - Instrumentation and Detectors ,Physics - Optics ,Quantum Physics - Abstract
Wide-field magnetic microscopy using nitrogen-vacancy (NV) centers in diamond can yield high-quality magnetic images of DC and AC magnetic fields. The unique combination of micron-scale spatial resolution of scalar or vector fields at room temperature and parallel camera readout make this an appealing technique for applications in biology, geology, condensed-matter physics, and electronics. However, while NV magnetic microscopy has achieved great success in these areas, historically the accessible frequency range has been limited. In this paper, we overcome this limitation by implementing the recently developed technique of quantum frequency mixing. With this approach, we generate wide-field magnetic images of test structures driven by alternating currents up to 70 MHz, well outside the reach of DC and Rabi magnetometry methods. With further improvements, this approach could find utility in hyperspectral imaging for electronics power spectrum analysis, electronics diagnostics and troubleshooting, and quantum computing hardware validation., Comment: 8 pages main text, 3 pages supplement
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- 2024
17. Multi-Object Hallucination in Vision-Language Models
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Chen, Xuweiyi, Ma, Ziqiao, Zhang, Xuejun, Xu, Sihan, Qian, Shengyi, Yang, Jianing, Fouhey, David F., and Chai, Joyce
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence ,Computer Science - Computation and Language - Abstract
Large vision language models (LVLMs) often suffer from object hallucination, producing objects not present in the given images. While current benchmarks for object hallucination primarily concentrate on the presence of a single object class rather than individual entities, this work systematically investigates multi-object hallucination, examining how models misperceive (e.g., invent nonexistent objects or become distracted) when tasked with focusing on multiple objects simultaneously. We introduce Recognition-based Object Probing Evaluation (ROPE), an automated evaluation protocol that considers the distribution of object classes within a single image during testing and uses visual referring prompts to eliminate ambiguity. With comprehensive empirical studies and analysis of potential factors leading to multi-object hallucination, we found that (1). LVLMs suffer more hallucinations when focusing on multiple objects compared to a single object. (2). The tested object class distribution affects hallucination behaviors, indicating that LVLMs may follow shortcuts and spurious correlations. (3). Hallucinatory behaviors are influenced by data-specific factors, salience and frequency, and model intrinsic behaviors. We hope to enable LVLMs to recognize and reason about multiple objects that often occur in realistic visual scenes, provide insights, and quantify our progress towards mitigating the issues., Comment: Accepted to NeurIPS 2024 | Project page: https://multi-object-hallucination.github.io/
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- 2024
18. Infrared Computer Vision for Utility-Scale Photovoltaic Array Inspection
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Ramirez, David F., Pujara, Deep, Tepedelenlioglu, Cihan, Srinivasan, Devarajan, and Spanias, Andreas
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Electrical Engineering and Systems Science - Image and Video Processing - Abstract
Utility-scale solar arrays require specialized inspection methods for detecting faulty panels. Photovoltaic (PV) panel faults caused by weather, ground leakage, circuit issues, temperature, environment, age, and other damage can take many forms but often symptomatically exhibit temperature differences. Included is a mini survey to review these common faults and PV array fault detection approaches. Among these, infrared thermography cameras are a powerful tool for improving solar panel inspection in the field. These can be combined with other technologies, including image processing and machine learning. This position paper examines several computer vision algorithms that automate thermal anomaly detection in infrared imagery. We demonstrate our infrared thermography data collection approach, the PV thermal imagery benchmark dataset, and the measured performance of image processing transformations, including the Hough Transform for PV segmentation. The results of this implementation are presented with a discussion of future work., Comment: Accepted to Information, Intelligence, Systems and Applications (IISA), July 2024
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- 2024
19. PathAlign: A vision-language model for whole slide images in histopathology
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Ahmed, Faruk, Sellergren, Andrew, Yang, Lin, Xu, Shawn, Babenko, Boris, Ward, Abbi, Olson, Niels, Mohtashamian, Arash, Matias, Yossi, Corrado, Greg S., Duong, Quang, Webster, Dale R., Shetty, Shravya, Golden, Daniel, Liu, Yun, Steiner, David F., and Wulczyn, Ellery
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence ,Computer Science - Computation and Language ,Computer Science - Machine Learning - Abstract
Microscopic interpretation of histopathology images underlies many important diagnostic and treatment decisions. While advances in vision-language modeling raise new opportunities for analysis of such images, the gigapixel-scale size of whole slide images (WSIs) introduces unique challenges. Additionally, pathology reports simultaneously highlight key findings from small regions while also aggregating interpretation across multiple slides, often making it difficult to create robust image-text pairs. As such, pathology reports remain a largely untapped source of supervision in computational pathology, with most efforts relying on region-of-interest annotations or self-supervision at the patch-level. In this work, we develop a vision-language model based on the BLIP-2 framework using WSIs paired with curated text from pathology reports. This enables applications utilizing a shared image-text embedding space, such as text or image retrieval for finding cases of interest, as well as integration of the WSI encoder with a frozen large language model (LLM) for WSI-based generative text capabilities such as report generation or AI-in-the-loop interactions. We utilize a de-identified dataset of over 350,000 WSIs and diagnostic text pairs, spanning a wide range of diagnoses, procedure types, and tissue types. We present pathologist evaluation of text generation and text retrieval using WSI embeddings, as well as results for WSI classification and workflow prioritization (slide-level triaging). Model-generated text for WSIs was rated by pathologists as accurate, without clinically significant error or omission, for 78% of WSIs on average. This work demonstrates exciting potential capabilities for language-aligned WSI embeddings., Comment: 9 main pages and 19 pages of supplemental material; 3 main tables, 3 main figures and 11 supplemental tables, 7 supplemental figures
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- 2024
20. 3D-MVP: 3D Multiview Pretraining for Robotic Manipulation
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Qian, Shengyi, Mo, Kaichun, Blukis, Valts, Fouhey, David F., Fox, Dieter, and Goyal, Ankit
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Computer Science - Robotics ,Computer Science - Computer Vision and Pattern Recognition - Abstract
Recent works have shown that visual pretraining on egocentric datasets using masked autoencoders (MAE) can improve generalization for downstream robotics tasks. However, these approaches pretrain only on 2D images, while many robotics applications require 3D scene understanding. In this work, we propose 3D-MVP, a novel approach for 3D multi-view pretraining using masked autoencoders. We leverage Robotic View Transformer (RVT), which uses a multi-view transformer to understand the 3D scene and predict gripper pose actions. We split RVT's multi-view transformer into visual encoder and action decoder, and pretrain its visual encoder using masked autoencoding on large-scale 3D datasets such as Objaverse. We evaluate 3D-MVP on a suite of virtual robot manipulation tasks and demonstrate improved performance over baselines. We also show promising results on a real robot platform with minimal finetuning. Our results suggest that 3D-aware pretraining is a promising approach to improve sample efficiency and generalization of vision-based robotic manipulation policies. We will release code and pretrained models for 3D-MVP to facilitate future research. Project site: https://jasonqsy.github.io/3DMVP
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- 2024
21. Suboptimality bounds for trace-bounded SDPs enable a faster and scalable low-rank SDP solver SDPLR+
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Huang, Yufan and Gleich, David F.
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Mathematics - Optimization and Control ,Computer Science - Machine Learning ,Mathematics - Numerical Analysis - Abstract
Semidefinite programs (SDPs) and their solvers are powerful tools with many applications in machine learning and data science. Designing scalable SDP solvers is challenging because by standard the positive semidefinite decision variable is an $n \times n$ dense matrix, even though the input is often $n \times n$ sparse matrices. However, the information in the solution may not correspond to a full-rank dense matrix as shown by Barvinok and Pataki. Two decades ago, Burer and Monteiro developed an SDP solver $\texttt{SDPLR}$ that optimizes over a low-rank factorization instead of the full matrix. This greatly decreases the storage cost and works well for many problems. The original solver $\texttt{SDPLR}$ tracks only the primal infeasibility of the solution, limiting the technique's flexibility to produce moderate accuracy solutions. We use a suboptimality bound for trace-bounded SDP problems that enables us to track the progress better and perform early termination. We then develop $\texttt{SDPLR+}$, which starts the optimization with an extremely low-rank factorization and dynamically updates the rank based on the primal infeasibility and suboptimality. This further speeds up the computation and saves the storage cost. Numerical experiments on Max Cut, Minimum Bisection, Cut Norm, and Lov\'{a}sz Theta problems with many recent memory-efficient scalable SDP solvers demonstrate its scalability up to problems with million-by-million decision variables and it is often the fastest solver to a moderate accuracy of $10^{-2}$., Comment: 17 pages
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- 2024
22. 3D-GRAND: A Million-Scale Dataset for 3D-LLMs with Better Grounding and Less Hallucination
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Yang, Jianing, Chen, Xuweiyi, Madaan, Nikhil, Iyengar, Madhavan, Qian, Shengyi, Fouhey, David F., and Chai, Joyce
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence ,Computer Science - Computation and Language ,Computer Science - Machine Learning ,Computer Science - Robotics - Abstract
The integration of language and 3D perception is crucial for developing embodied agents and robots that comprehend and interact with the physical world. While large language models (LLMs) have demonstrated impressive language understanding and generation capabilities, their adaptation to 3D environments (3D-LLMs) remains in its early stages. A primary challenge is the absence of large-scale datasets that provide dense grounding between language and 3D scenes. In this paper, we introduce 3D-GRAND, a pioneering large-scale dataset comprising 40,087 household scenes paired with 6.2 million densely-grounded scene-language instructions. Our results show that instruction tuning with 3D-GRAND significantly enhances grounding capabilities and reduces hallucinations in 3D-LLMs. As part of our contributions, we propose a comprehensive benchmark 3D-POPE to systematically evaluate hallucination in 3D-LLMs, enabling fair comparisons among future models. Our experiments highlight a scaling effect between dataset size and 3D-LLM performance, emphasizing the critical role of large-scale 3D-text datasets in advancing embodied AI research. Notably, our results demonstrate early signals for effective sim-to-real transfer, indicating that models trained on large synthetic data can perform well on real-world 3D scans. Through 3D-GRAND and 3D-POPE, we aim to equip the embodied AI community with essential resources and insights, setting the stage for more reliable and better-grounded 3D-LLMs. Project website: https://3d-grand.github.io, Comment: Project website: https://3d-grand.github.io
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- 2024
23. Motivating the Learning Process: Integrating Self-Determination Theory into a Dynamical Systems Framework
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Peter Claudius Osei and David F. Bjorklund
- Abstract
The complexity of modern societies necessitates that children learn highly abstract material, such as mathematics, which often conflicts with behavioral goals that are innately motivating. For instance, children's educational success is generally evaluated based on their individual achievements, while humans are motivated to learn by engaging in socially relevant behaviors. Additionally, science-related content typically requires higher-level abstract thinking to comprehend related concepts and perform the underlying cognitive processes, whereas humans evolved primarily to monitor and manipulate the physical environment by moving within it to execute foraging and hunting behaviors. Moreover, school systems inherently prescribe top-down strategies in which teachers transfer knowledge by providing instructions to guide students' knowledge acquisition. By contrast, humans evolved to learn through bottom-up processes motivated by the learner's internal drive to explore their physical and social environment. As a consequence, skeletal cognitive competencies that evolved throughout human history create a mismatch between why children are motivated to learn and how they are expected to learn. This review adopts an evolutionary perspective to examine how the interplay between students' internal physiological and psychological adaptations and external instructional methods of modern educational systems impacts motivation and learning. Ultimately, the review offers suggestions on how to motivate the learning process by integrating self-determination theory principles into a dynamical systems framework.
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- 2024
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24. The Perceived Complexity of Learning Tasks Influences Students' Collaborative Interactions in Immersive Virtual Reality
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Henry Matovu, Mihye Won, Ricardo Bruno Hernandez-Alvarado, Dewi Ayu Kencana Ungu, David F. Treagust, Chin-Chung Tsai, Mauro Mocerino, and Roy Tasker
- Abstract
This study investigated how different learning tasks influence students' collaborative interactions in immersive Virtual Reality (iVR). A set of chemistry learning activities was designed with iVR, and 35 pairs of undergraduate students went through the activities. Videos of students' interactions were analysed to identify patterns in students' physical, conceptual, and social interactions. When students were manipulating conceptually familiar virtual objects (several water molecules), they perceived the tasks as a simple extension of prior knowledge and did not attempt to explore the 3D visualisation much. They did not move around to take different perspectives, and conceptual discussions were brief. Their prior power relations (leader-follower) carried over in iVR environments. In contrast, when conceptually unfamiliar chemical structures (protein enzyme) were displayed, students perceived the tasks as complex, demanding a new mode of learning. They spontaneously moved around to explore and appreciate the 3D visualisation of iVR. Walking to different positions to observe the virtual objects from multiple angles, students engaged in more collaborative, exploratory conceptual discussions. As the perceived complexity of learning tasks or virtual objects triggers different collaborative interactions amongst students, careful considerations need to be placed on the design of iVR tasks to encourage productive collaborative learning.
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- 2024
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25. How Personalization Affects Motivation in Gamified Review Assessments
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Luiz Rodrigues, Paula T. Palomino, Armando M. Toda, Ana C. T. Klock, Marcela Pessoa, Filipe D. Pereira, Elaine H. T. Oliveira, David F. Oliveira, Alexandra I. Cristea, Isabela Gasparini, and Seiji Isotani
- Abstract
Personalized gamification aims to address shortcomings of the one-size-fits-all (OSFA) approach in improving students' motivations throughout the learning process. However, studies still focus on personalizing to a single user dimension, ignoring multiple individual and contextual factors that affect user motivation. Unlike prior research, we address this issue by exploring multidimensional personalization compared to OSFA based on a multi-institution sample. Thus, we conducted a controlled experiment in three institutions, comparing gamification designs ("OSFA" and "Personalized" to the learning task and users' gaming habits/preferences and demographics) in terms of 58 students' motivations to complete assessments for learning. Our results suggest no significant differences among OSFA and Personalized designs, despite suggesting user motivation depended on fewer user characteristics when using personalization. Additionally, exploratory analyses suggest personalization was positive for females and those holding a technical degree, but negative for those who prefer adventure games and those who prefer single-playing. Our contribution benefits designers, suggesting how personalization works; practitioners, demonstrating to whom the personalization strategy was more or less suitable; and researchers, providing future research directions.
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- 2024
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26. AI-enabled cardiac chambers volumetry in coronary artery calcium scans (AI-CACTM) predicts heart failure and outperforms NT-proBNP: The multi-ethnic study of Atherosclerosis
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Naghavi, Morteza, Reeves, Anthony, Budoff, Matthew, Li, Dong, Atlas, Kyle, Zhang, Chenyu, Atlas, Thomas, Roy, Sion K, Henschke, Claudia I, Wong, Nathan D, Defilippi, Christopher, Levy, Daniel, and Yankelevitz, David F
- Subjects
Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Clinical Sciences ,Heart Disease ,Aging ,Cardiovascular ,Networking and Information Technology R&D (NITRD) ,Prevention ,Heart Disease - Coronary Heart Disease ,Machine Learning and Artificial Intelligence ,Atherosclerosis ,Humans ,Female ,Male ,Peptide Fragments ,Natriuretic Peptide ,Brain ,Aged ,Heart Failure ,Predictive Value of Tests ,Coronary Artery Disease ,Middle Aged ,Risk Factors ,Biomarkers ,Vascular Calcification ,Risk Assessment ,Prognosis ,United States ,Time Factors ,Incidence ,Aged ,80 and over ,Computed Tomography Angiography ,Artificial Intelligence ,Coronary Angiography ,Radiographic Image Interpretation ,Computer-Assisted ,Reproducibility of Results ,Multidetector Computed Tomography ,Asymptomatic Diseases ,Artificial intelligence ,Coronary artery calcium ,Heart failure ,Left ventricular volume ,NT-proBNP ,Cardiorespiratory Medicine and Haematology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences ,Applied computing - Abstract
IntroductionCoronary artery calcium (CAC) scans contain useful information beyond the Agatston CAC score that is not currently reported. We recently reported that artificial intelligence (AI)-enabled cardiac chambers volumetry in CAC scans (AI-CAC™) predicted incident atrial fibrillation in the Multi-Ethnic Study of Atherosclerosis (MESA). In this study, we investigated the performance of AI-CAC cardiac chambers for prediction of incident heart failure (HF).MethodsWe applied AI-CAC to 5750 CAC scans of asymptomatic individuals (52% female, White 40%, Black 26%, Hispanic 22% Chinese 12%) free of known cardiovascular disease at the MESA baseline examination (2000-2002). We used the 15-year outcomes data and compared the time-dependent area under the curve (AUC) of AI-CAC volumetry versus NT-proBNP, Agatston score, and 9 known clinical risk factors (age, gender, diabetes, current smoking, hypertension medication, systolic and diastolic blood pressure, LDL, HDL for predicting incident HF over 15 years.ResultsOver 15 years of follow-up, 256 HF events accrued. The time-dependent AUC [95% CI] at 15 years for predicting HF with AI-CAC all chambers volumetry (0.86 [0.82,0.91]) was significantly higher than NT-proBNP (0.74 [0.69, 0.77]) and Agatston score (0.71 [0.68, 0.78]) (p
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- 2024
27. Quarter- and half-filled quantum Hall states and their competing interactions in bilayer graphene
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Kumar, Ravi, Haug, André, Kim, Jehyun, Yutushui, Misha, Khudiakov, Konstantin, Bhardwaj, Vishal, Ilin, Alexey, Watanabe, Kenji, Taniguchi, Takashi, Mross, David F., and Ronen, Yuval
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Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Strongly Correlated Electrons - Abstract
Bilayer graphene has emerged as a key platform for non-Abelian fractional quantum Hall (FQH) states, exhibiting multiple half-filled plateaus with large energy gaps. Here, we report four unexpected quarter-filled states and complete the sequence of half-filled plateaus by observing the previously missing $\nu=-\frac{3}{2}$ and $\nu=\frac{1}{2}$ states. Identifying the half-filled plateaus according to their Levin--Halperin daughter states, we reveal an alternating pattern of non-Abelian topological orders. Whenever a pair of $N=1$ Landau levels cross, anti-Pfaffian and Pfaffian develop in the lower and higher levels, respectively. Surprisingly, quarter states occur in $N=0$ levels and are also accompanied by daughters. The mutual exclusion of half- and quarter-filled states indicates a robust competition between the interactions favoring paired states of either two-flux or four-flux composite fermions. Finally, we observe several FQH states that require strong interactions between composite fermions. The systematic pattern of non-Abelian states across two generations of even denominators strengthens the identification of their topological orders and suggests a universal origin., Comment: 17 pages, 5 figures
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- 2024
28. Paired fermions in strong magnetic fields and daughters of even-denominator Hall plateaus
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Yutushui, Misha, Hermanns, Maria, and Mross, David F.
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Condensed Matter - Strongly Correlated Electrons - Abstract
Recent quantum Hall experiments have observed `daughter states' next to several plateaus at half-integer filling factors in various platforms. These states were first proposed based on model wavefunctions for the Moore-Read state by Levin and Halperin. We show that these daughters and their parents belong to an extensive family tree that encompasses all pairing channels and permits a unified description in terms of weakly interacting composite fermions. Each daughter represents a bosonic integer quantum Hall state formed by composite-fermion pairs. The pairing of the parent dictates an additional number of filled composite-fermion Landau levels. We support our field-theoretic composite-fermion treatment by using the K-matrix formalism, analysis of trial wavefunctions, and a coupled-wire construction. Our analysis yields the topological orders, quantum numbers, and experimental signatures of all daughters of paired states at half-filling and `next-generation' even-denominators. Crucially, no two daughters share the same two parents. The unique parentage implies that Hall conductance measurements alone could pinpoint the topological order of even-denominator plateaus. Additionally, we propose a numerically suitable trial wavefunction for one daughter of the SU(2)$_2$ topological order, which arises at filling factor $\nu=\frac{6}{11}$. Finally, our insights explain experimentally observed features of transitions in wide-quantum wells, such as suppression of the Jain states with the simultaneous development of half-filled and daughter states., Comment: 11 pages, 4 figures
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- 2024
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29. Environmental cosmic acceleration from a phase transition in the dark sector
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Christiansen, Øyvind, Hassani, Farbod, and Mota, David F.
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Astrophysics - Cosmology and Nongalactic Astrophysics ,General Relativity and Quantum Cosmology ,High Energy Physics - Theory - Abstract
A new degravitation mechanism within the framework of scalar tensor gravity is proposed. The mechanism eliminates all constant contributions from the potential to the Friedmann equation, leaving only the kinematic and the dynamic terms of the potential to drive cosmic acceleration. We explore a scenario involving a density-triggered phase transition in the late-time universe, and argue that the resulting effective energy density and equation of state parameter can explain late-time cosmology when extrapolated to a region of the parameter space., Comment: 5 pages, 2 figures
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- 2024
30. Using analytic models to describe effective PDFs
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Ochoa-Oregon, Salvador A., Rentería-Estrada, David F., Hernández-Pinto, Roger J., Sborlini, German F. R., and Zurita, Pia
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High Energy Physics - Phenomenology ,High Energy Physics - Theory - Abstract
Parton distribution functions play a pivotal role in hadron collider phenomenology. They are non-perturbative quantities extracted from fits to available data, and their scale dependence is dictated by the DGLAP evolution equations. In this article, we discuss machine-assisted strategies to efficiently compute PDFs directly incorporating the scale evolution without the need of separately solving DGLAP equations. Analytical approximations to the PDFs as a function of $x$ and $Q^2$, including up to next-to-leading order effects in Quantum Chromodynamics, are obtained. The methodology is tested by reproducing the $\texttt{HERAPDF2.0}$ set and implementing the analytical expressions in benchmarking codes. It is found that the computational cost is reduced while the precision of the simulations stays well under control., Comment: 12 pages, 12 figures
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- 2024
31. Gravitational wave probes of Barrow cosmology with LISA standard sirens
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Asghari, Mahnaz, Allahyari, Alireza, and Mota, David F.
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General Relativity and Quantum Cosmology ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We study the Barrow cosmological model, which proposes that quantum gravity effects create a complex, fractal structure for the universe's apparent horizon. We leverage the thermodynamics - gravity conjecture. By applying the Clausius relation to the apparent horizon of the Friedmann - Lema\^itre - Robertson - Walker universe within this framework, we derive modified field equations where the Barrow entropy is linked to the horizon. We assess the Barrow cosmology against current observations - cosmic microwave background , supernovae , and baryon acoustic oscillations data - and include projections for future Laser Interferometer Space Antenna (LISA) standard sirens (SS). Our numerical results suggest a modest improvement in the Hubble tension for Barrow cosmology with phantom dark energy behavior, compared to the standard cosmological model. Furthermore, incorporating simulated LISA SS data alongside existing observational constraints tightens the limitations on cosmological parameters, particularly the deformation exponent., Comment: 26 pages, 5 figures
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- 2024
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32. Gravitational wave pulse and memory effects for hairy Kiselev black hole and its analogy with Bondi-Sachs formalism
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Hadi, H., Akbarieh, Amin Rezaei, and Mota, David F.
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General Relativity and Quantum Cosmology - Abstract
The investigation of non-vacuum cosmological backgrounds containing black holes is greatly enhanced by the Kiselev solution. This solution plays a crucial role in understanding the properties of the background and its relationship with the features of the black hole. Consequently, the gravitational memory effects at large distances from the black hole offer a valuable means of obtaining information about the surrounding field parameter N and parameters related to the hair of the hairy Kiselev Black hole. This paper investigates the gravitational memory effects in the context of the Kiselev solution through two distinct approaches. At first, the gravitational memory effect at null infinity is explored by utilizing the Bondi-Sachs formalism by introducing a gravitational wave (GW) pulse to the solution. The resulting Bondi mass is then analyzed to gain further insight. Therefore, the Kiselev solution is being examined to determine the variations in Bondi mass caused by the pulse of GWs. The study of changes in Bondi mass is motivated by the fact that it is dynamic and time-dependent, and it measures mass on an asymptotically null slice or the densities of energy on celestial spheres. In the second approach, the investigation of displacement and velocity memory effects is undertaken in relation to the deviation of two neighboring geodesics and the deviation of their derivative influenced by surrounding field parameter N and the hair of hairy Kiselev black hole. This analysis is conducted within the context of a gravitational wave pulse present in the background of a hairy Kiselev black hole surrounded by a field parameter N., Comment: 18 pages, 30 figures
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- 2024
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33. Vacuum amplitudes and time-like causal unitary in the loop-tree duality
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The LTD Collaboration, Ramírez-Uribe, Selomit, Rentería-Olivo, Andrés E., Rentería-Estrada, David F., de Lejarza, Jorge J. Martínez, Dhani, Prasanna K., Cieri, Leandro, Hernández-Pinto, Roger J., Sborlini, German F. R., Bobadilla, William J. Torres, and Rodrigo, Germán
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High Energy Physics - Phenomenology ,High Energy Physics - Experiment ,High Energy Physics - Theory - Abstract
We present the first proof-of-concept application to decay processes at higher perturbative orders of LTD causal unitary, a novel methodology that exploits the causal properties of vacuum amplitudes in the loop-tree duality (LTD) and is directly well-defined in the four physical dimensions of the space-time. The generation of loop- and tree-level contributions to the differential decay rates from a kernel multiloop vacuum amplitude is shown in detail, and explicit expressions are presented for selected processes that are suitable for a lightweight understanding of the method. Specifically, we provide a clear physical interpretation of the local cancellation of soft, collinear and unitary threshold singularities, and of the local renormalisation of ultraviolet singularities. The presentation is illustrated with numerical results that showcase the advantages of the method., Comment: 11 pages, 6 figures
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- 2024
34. Chemical mass-action systems as analog computers: implementing arithmetic computations at specified speed
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Anderson, David F. and Joshi, Badal
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Mathematics - Dynamical Systems ,Quantitative Biology - Molecular Networks ,37N25 - Abstract
Recent technological advances allow us to view chemical mass-action systems as analog computers. In this context, the inputs to a computation are encoded as initial values of certain chemical species while the outputs are the limiting values of other chemical species. In this paper, we design chemical systems that carry out the elementary arithmetic computations of: identification, inversion, $m$th roots (for $m \ge 2$), addition, multiplication, absolute difference, rectified subtraction over non-negative real numbers, and partial real inversion over real numbers. We prove that these ``elementary modules'' have a speed of computation that is independent of the inputs to the computation. Moreover, we prove that finite sequences of such elementary modules, running in parallel, can carry out composite arithmetic over real numbers, also at a rate that is independent of inputs. Furthermore, we show that the speed of a composite computation is precisely the speed of the slowest elementary step. Specifically, the scale of the composite computation, i.e. the number of elementary steps involved in the composite, does not affect the overall asymptotic speed -- a feature of the parallel computing nature of our algorithm. Our proofs require the careful mathematical analysis of certain non-autonomous systems, and we believe this analysis will be useful in different areas of applied mathematics, dynamical systems, and the theory of computation. We close with a discussion on future research directions, including numerous important open theoretical questions pertaining to the field of computation with reaction networks.
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- 2024
35. Uncertainties in Measurements of Bubbly Flows Using Phase-Detection Probes
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Bürgler, Matthias, Valero, Daniel, Hohermuth, Benjamin, Boes, Robert M., and Vetsch, David F.
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Physics - Fluid Dynamics - Abstract
The analysis of bubbly two-phase flows is challenging due to their turbulent nature and the need for intrusive phase-detection probes. However, accurately characterizing these flows is crucial for safely designing critical infrastructure such as dams and their appurtenant structures. The combination of dual-tip intrusive phase-detection probes with advanced signal processing algorithms enables the assessment of pseudo-instantaneous 1-D velocity time series; for which the limitations are not fully fathomed. In this investigation, we theoretically define four major sources of error, which we quantify using synthetically generated turbulent time series, coupled with the simulated response of a phase detection probe. Our findings show that typical high-velocity flows in hydraulic structures hold up to 15% error in the mean velocity estimations and up to 35% error in the turbulence intensity estimations for the most critical conditions, typically occurring in the proximity of the wall. Based on thousands of simulations, our study provides a novel data-driven tool for the estimation of these baseline errors (bias and uncertainties) in real-word phase-detection probe measurements., Comment: 35 pages, 10 figures
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- 2024
36. FAR: Flexible, Accurate and Robust 6DoF Relative Camera Pose Estimation
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Rockwell, Chris, Kulkarni, Nilesh, Jin, Linyi, Park, Jeong Joon, Johnson, Justin, and Fouhey, David F.
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Computer Science - Computer Vision and Pattern Recognition - Abstract
Estimating relative camera poses between images has been a central problem in computer vision. Methods that find correspondences and solve for the fundamental matrix offer high precision in most cases. Conversely, methods predicting pose directly using neural networks are more robust to limited overlap and can infer absolute translation scale, but at the expense of reduced precision. We show how to combine the best of both methods; our approach yields results that are both precise and robust, while also accurately inferring translation scales. At the heart of our model lies a Transformer that (1) learns to balance between solved and learned pose estimations, and (2) provides a prior to guide a solver. A comprehensive analysis supports our design choices and demonstrates that our method adapts flexibly to various feature extractors and correspondence estimators, showing state-of-the-art performance in 6DoF pose estimation on Matterport3D, InteriorNet, StreetLearn, and Map-free Relocalization., Comment: Accepted to CVPR 2024. Project Page: https://crockwell.github.io/far/
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- 2024
37. Minimally interactive segmentation of soft-tissue tumors on CT and MRI using deep learning
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Spaanderman, Douwe J., Starmans, Martijn P. A., van Erp, Gonnie C. M., Hanff, David F., Sluijter, Judith H., Schut, Anne-Rose W., van Leenders, Geert J. L. H., Verhoef, Cornelis, Grünhagen, Dirk J., Niessen, Wiro J., Visser, Jacob J., and Klein, Stefan
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- 2024
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38. Heterostructures of Ni(II)-doped CdS quantum dots and β-Pb0.33V2O5 nanowires: Enhanced charge separation and redox photocatalysis via doping of QDs
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García-Pedraza, Karoline E., Ayala, Jaime R., Wijethunga, Udani, Giem, Alice R., Agbeworvi, George, Banerjee, Sarbajit, and Watson, David F.
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- 2024
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39. Sustainable practices in ophthalmology—steps towards environmental stewardship in healthcare
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Winklmair, Nicolas, Chang, David F., and Findl, Oliver
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- 2024
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40. Proteome-wide copy-number estimation from transcriptomics
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Sweatt, Andrew J, Griffiths, Cameron D, Groves, Sarah M, Paudel, B Bishal, Wang, Lixin, Kashatus, David F, and Janes, Kevin A
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- 2024
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41. Genomic analysis of intracranial and subcortical brain volumes yields polygenic scores accounting for variation across ancestries
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García-Marín, Luis M., Campos, Adrian I., Diaz-Torres, Santiago, Rabinowitz, Jill A., Ceja, Zuriel, Mitchell, Brittany L., Grasby, Katrina L., Thorp, Jackson G., Agartz, Ingrid, Alhusaini, Saud, Ames, David, Amouyel, Philippe, Andreassen, Ole A., Arfanakis, Konstantinos, Arias-Vasquez, Alejandro, Armstrong, Nicola J., Athanasiu, Lavinia, Bastin, Mark E., Beiser, Alexa S., Bennett, David A., Bis, Joshua C., Boks, Marco P. M., Boomsma, Dorret I., Brodaty, Henry, Brouwer, Rachel M., Buitelaar, Jan K., Burkhardt, Ralph, Cahn, Wiepke, Calhoun, Vince D., Carmichael, Owen T., Chakravarty, Mallar, Chen, Qiang, Ching, Christopher R. K., Cichon, Sven, Crespo-Facorro, Benedicto, Crivello, Fabrice, Dale, Anders M., Smith, George Davey, de Geus, Eco J. C., De Jager, Philip L., de Zubicaray, Greig I., Debette, Stéphanie, DeCarli, Charles, Depondt, Chantal, Desrivières, Sylvane, Djurovic, Srdjan, Ehrlich, Stefan, Erk, Susanne, Espeseth, Thomas, Fernández, Guillén, Filippi, Irina, Fisher, Simon E., Fleischman, Debra A., Fletcher, Evan, Fornage, Myriam, Forstner, Andreas J., Francks, Clyde, Franke, Barbara, Ge, Tian, Goldman, Aaron L., Grabe, Hans J., Green, Robert C., Grimm, Oliver, Groenewold, Nynke A., Gruber, Oliver, Gudnason, Vilmundur, Håberg, Asta K., Haukvik, Unn K., Heinz, Andreas, Hibar, Derrek P., Hilal, Saima, Himali, Jayandra J., Ho, Beng-Choon, Hoehn, David F., Hoekstra, Pieter J., Hofer, Edith, Hoffmann, Wolfgang, Holmes, Avram J., Homuth, Georg, Hosten, Norbert, Ikram, M. Kamran, Ipser, Jonathan C., Jack Jr, Clifford R., Jahanshad, Neda, Jönsson, Erik G., Kahn, Rene S., Kanai, Ryota, Klein, Marieke, Knol, Maria J., Launer, Lenore J., Lawrie, Stephen M., Hellard, Stephanie Le, Lee, Phil H., Lemaître, Hervé, Li, Shuo, Liewald, David C. M., Lin, Honghuang, Longstreth, Jr, W. T., Lopez, Oscar L., Luciano, Michelle, Maillard, Pauline, Marquand, Andre F., Martin, Nicholas G., Martinot, Jean-Luc, Mather, Karen A., Mattay, Venkata S., McMahon, Katie L., Mecocci, Patrizia, Melle, Ingrid, Meyer-Lindenberg, Andreas, Mirza-Schreiber, Nazanin, Milaneschi, Yuri, Mosley, Thomas H., Mühleisen, Thomas W., Müller-Myhsok, Bertram, Maniega, Susana Muñoz, Nauck, Matthias, Nho, Kwangsik, Niessen, Wiro J., Nöthen, Markus M., Nyquist, Paul A., Oosterlaan, Jaap, Pandolfo, Massimo, Paus, Tomas, Pausova, Zdenka, Penninx, Brenda W. J. H., Pike, G. Bruce, Psaty, Bruce M., Pütz, Benno, Reppermund, Simone, Rietschel, Marcella D., Risacher, Shannon L., Romanczuk-Seiferth, Nina, Romero-Garcia, Rafael, Roshchupkin, Gennady V., Rotter, Jerome I., Sachdev, Perminder S., Sämann, Philipp G., Saremi, Arvin, Sargurupremraj, Muralidharan, Saykin, Andrew J., Schmaal, Lianne, Schmidt, Helena, Schmidt, Reinhold, Schofield, Peter R., Scholz, Markus, Schumann, Gunter, Schwarz, Emanuel, Shen, Li, Shin, Jean, Sisodiya, Sanjay M., Smith, Albert V., Smoller, Jordan W., Soininen, Hilkka S., Steen, Vidar M., Stein, Dan J., Stein, Jason L., Thomopoulos, Sophia I., Toga, Arthur W., Tordesillas-Gutiérrez, Diana, Trollor, Julian N., Valdes-Hernandez, Maria C., van ′t Ent, Dennis, van Bokhoven, Hans, van der Meer, Dennis, van der Wee, Nic J. A., Vázquez-Bourgon, Javier, Veltman, Dick J., Vernooij, Meike W., Villringer, Arno, Vinke, Louis N., Völzke, Henry, Walter, Henrik, Wardlaw, Joanna M., Weinberger, Daniel R., Weiner, Michael W., Wen, Wei, Westlye, Lars T., Westman, Eric, White, Tonya, Witte, A. Veronica, Wolf, Christiane, Yang, Jingyun, Zwiers, Marcel P., Ikram, M. Arfan, Seshadri, Sudha, Thompson, Paul M., Satizabal, Claudia L., Medland, Sarah E., and Rentería, Miguel E.
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- 2024
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42. Detection rate of gastrin-releasing peptide receptor (GRPr) targeted tracers for positron emission tomography (PET) imaging in primary prostate cancer: a systematic review and meta-analysis
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Belge Bilgin, Gokce, Bilgin, Cem, Orscelik, Atakan, Burkett, Brian J., Thorpe, Matthew P., Johnson, Derek R., Johnson, Geoffrey B., Kallmes, David F., Sartor, Oliver, and Kendi, Ayse Tuba
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- 2024
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43. A Systematic Overview of Contraindications and Special Warnings for Biologic and Targeted Synthetic Disease Modifying Antirheumatic Drugs: Establishing a Framework to Create a “Safety Checklist”
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Skaarup, Lykke, Ingrid, Elvina, Sepriano, Alexandre, Nikiphorou, Elena, Østgård, René, Lauper, Kim, Grosse-Michaelis, Ilona, Kloppenburg, Margreet, Glintborg, Bente, Liew, David F. L., and Kragstrup, Tue W.
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- 2024
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44. Enhancing runoff forecasting through the integration of satellite precipitation data and hydrological knowledge into machine learning models
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Muñoz, Paul, Muñoz, David F., Orellana-Alvear, Johanna, and Célleri, Rolando
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- 2024
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45. Association between smoking and prostate cancer survivors’ long-term quality of life and function: an analysis of the CEASAR (Comparative Effectiveness Analysis of Surgery and Radiation) study
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Nguyen, David-Dan, Barocas, Daniel A., Zhao, Zhiguo, Huang, Li-Ching, Koyama, Tatsuki, Al Hussein AI Awamlh, Bashir, Penson, David F., Morgans, Alicia K., Goodman, Michael, Hamilton, Ann S., Wu, Xia-Cheng, Li, Jie, Paddock, Lisa E., Stroup, Antoinette M., O’Neil, Brock B., Hoffman, Karen E., and Wallis, Christopher J. D.
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- 2024
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46. Targeting the chromatin binding of exportin-1 disrupts NFAT and T cell activation
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Chen, Yi Fan, Ghazala, Maryam, Friedrich, Ryan M., Cordova, Brittany A., Petroze, Frederick N., Srinivasan, Ramya, Allan, Kevin C., Yan, David F., Sax, Joel L., Carr, Kelley, Tomchuck, Suzanne L., Fedorov, Yuriy, Huang, Alex Y., Desai, Amar B., and Adams, Drew J.
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- 2024
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47. A flexible PageRank-based graph embedding framework closely related to spectral eigenvector embeddings
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Shur, Disha, Huang, Yufan, and Gleich, David F.
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- 2024
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48. A nonoscillatory, millisecond-scale embedding of brain state provides insight into behavior
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Parks, David F., Schneider, Aidan M., Xu, Yifan, Brunwasser, Samuel J., Funderburk, Samuel, Thurber, Danilo, Blanche, Tim, Dyer, Eva L., Haussler, David, and Hengen, Keith B.
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- 2024
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49. Sexual and Mental Health in Healthcare Workers during the COVID-19 Outbreak: Exploring the Role of Meaning-Centered Coping
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Pérez-Escobar, José Antonio, Carreno, David F., Pérez-Escobar, Rosalía, and Eisenbeck, Nikolett
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- 2024
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50. The Youth Sheehan Disability Scale: A Psychometric Evaluation
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DiFonte, Maria C., Sain, Kimberly S., and Tolin, David F.
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- 2024
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