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We carried out 10 field expeditions between 2010 and 2015 in the lowland part of the Congo River network in the eastern part of the basin (Democratic Republic of the Congo), to describe the spatial variations in fluvial dissolved carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) concentrations. We investigate the possible drivers of the spatial variations in dissolved CO2, CH4 and N2O concentrations by analyzing covariations with several other biogeochemical variables, aquatic metabolic processes (primary production and respiration), catchment characteristics (land cover) and wetland spatial distributions. We test the hypothesis that spatial patterns of CO2, CH4 and N2O are partly due to the connectivity with wetlands, in particular with a giant wetland of flooded forest in the core of the Congo basin, the “Cuvette Centrale Congolaise” (CCC). Two transects of 1650 km were carried out from the city of Kisangani to the city of Kinshasa, along the longest possible navigable section of the river and corresponding to 41 % of the total length of the main stem. Additionally, three time series of CH4 and N2O were obtained at fixed points in the main stem of the middle Congo (2013–2018, biweekly sampling), in the main stem of the lower Kasaï (2015–2017, monthly sampling) and in the main stem of the middle Oubangui (2010–2012, biweekly sampling). The variations in dissolved N2O concentrations were modest, with values oscillating around the concentration corresponding to saturation with the atmosphere, with N2O saturation level (%N2O, where atmospheric equilibrium corresponds to 100 %) ranging between 0 % and 561 % (average 142 %). The relatively narrow range of %N2O variations was consistent with low NH4+ (2.3±1.3 µmol L−1) and NO3- (5.6±5.1 µmol L−1) levels in these near pristine rivers and streams, with low agriculture pressure on the catchment (croplands correspond to 0.1 % of catchment land cover of sampled rivers), dominated by forests (∼70 % of land cover). The covariations in %N2O, NH4+, NO3- and dissolved oxygen saturation level (%O2) indicate N2O removal by soil or sedimentary denitrification in low O2, high NH4+ and low NO3- environments (typically small and organic matter rich streams) and N2O production by nitrification in high O2, low NH4+ and high NO3- (typical of larger rivers that are poor in organic matter). Surface waters were very strongly oversaturated in CO2 and CH4 with respect to atmospheric equilibrium, with values of the partial pressure of CO2 (pCO2) ranging between 1087 and 22 899 ppm (equilibrium ∼400 ppm) and dissolved CH4 concentrations ranging between 22 and 71 428 nmol L−1 (equilibrium ∼2 nmol L−1). Spatial variations were overwhelmingly more important than seasonal variations for pCO2, CH4 and %N2O as well as day–night variations for pCO2. The wide range of pCO2 and CH4 variations was consistent with the equally wide range of %O2 (0.3 %–122.8 %) and of dissolved organic carbon (DOC) (1.8–67.8 mg L−1), indicative of generation of these two greenhouse gases from intense processing of organic matter either in “terra firme” soils, wetlands or in-stream. However, the emission rate of CO2 to the atmosphere from riverine surface waters was on average about 10 times higher than the flux of CO2 produced by aquatic net heterotrophy (as evaluated from measurements of pelagic respiration and primary production). This indicates that the CO2 emissions from the river network were sustained by lateral inputs of CO2 (either from terra firme or from wetlands). The pCO2 and CH4 values decreased and %O2 increased with increasing Strahler order, showing that stream size explains part of the spatial variability of these quantities. In addition, several lines of evidence indicate that lateral inputs of carbon from wetlands (flooded forest and aquatic macrophytes) were of paramount importance in sustaining high CO2 and CH4 concentrations in the Congo river network, as well as driving spatial variations: the rivers draining the CCC were characterized by significantly higher pCO2 and CH4 and significantly lower %O2 and %N2O values than those not draining the CCC; pCO2 and %O2 values were correlated to the coverage of flooded forest on the catchment. The flux of greenhouse gases (GHGs) between rivers and the atmosphere averaged 2469 mmol m−2 d−1 for CO2 (range 86 and 7110 mmol m−2 d−1), 12 553 µmol m−2 d−1 for CH4 (range 65 and 597 260 µmol m−2 d−1) and 22 µmol m−2 d−1 for N2O (range −52 and 319 µmol m−2 d−1). The estimate of integrated CO2 emission from the Congo River network (251±46 TgC (1012 gC) yr−1), corresponding to nearly half the CO2 emissions from tropical oceans globally (565 TgC yr−1) and was nearly 2 times the CO2 emissions from the tropical Atlantic Ocean (137 TgC yr−1). Moreover, the integrated CO2 emission from the Congo River network is more than 3 times higher than the estimate of terrestrial net ecosystem exchange (NEE) on the whole catchment (77 TgC yr−1). This shows that it is unlikely that the CO2 emissions from the river network were sustained by the hydrological carbon export from terra firme soils (typically very small compared to terrestrial NEE) but most likely, to a large extent, they were sustained by wetlands (with a much higher hydrological connectivity with rivers and streams).

We report the spatial variations of dissolved carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) concentrations in the lowland part of the Congo River network obtained during ten field expeditions carried out between 2010 and 2015, in the eastern part of the basin (Democratic Republic of Congo). Two transects of 1,650 km were carried out from the city of Kisangani to the city of Kinshasa, along the longest possible navigable section of the river, and corresponding to 41 % of the total length of the mainstem. Additionally, three time series of CH4 and N2O were obtained at fixed points in the mainstem of the middle Congo (2013–2018, biweekly sampling), in the mainstem of the lower Kasaï (2015–2017, monthly sampling), and in the mainstem of the middle Oubangui (2010–2012, biweekly sampling). The variations of dissolved N2O concentrations were modest, with values oscillating around the concentration corresponding to saturation with the atmosphere, with N2O saturation level (%N2O) ranging between 0 % and 561 % (average 142 %). The relatively narrow range of %N2O variations was consistent with low NH4+ (2.3±1.3 µmol L−1) and NO3− (5.6±5.1 µmol L−1) levels in these near pristine rivers and streams with low agriculture pressure on the catchment (croplands correspond to 0.1 % of catchment land cover of sampled rivers), dominated by forests (~ 70 % of land cover). The co-variations of %N2O, NH4+, NO3−, and dissolved oxygen saturation level (%O2) indicate N2O removal by sedimentary denitrification in low O2, high NH4+ and low NO3− environments (typically small and organic matter rich streams) and N2O production by nitrification in high O2, low NH4+ and high NO3− (typical of larger rivers that are poor in organic matter). Surface waters were very strongly over-saturated in CO2 and CH4 with respect to atmospheric equilibrium, with values of the partial pressure of CO2 (pCO2) ranging between 1,087 and 22,899 ppm (equilibrium ~ 400 ppm), and dissolved CH4 concentrations ranging between 22 and 71,428 nmol L−1 (equilibrium ~ 2 nmol L−1). Spatial variations were overwhelmingly more important than seasonal variations for pCO2, CH4 and %N2O, and than diurnal (day-night) variations for pCO2. The wide range of pCO2 and CH4 variations was consistent with the equally wide range of %O2 (0.3–122.8 %) and of dissolved organic carbon (DOC) (1.8–67.8 mg L−1), indicative of intense processing of organic matter that generated these two greenhouse gases. However, the emission rate of CO2 to the atmosphere from riverine surface waters was on average about 10 times higher than the flux of CO2 produced by aquatic net heterotrophy (as evaluated from measurements of pelagic respiration and primary production). This indicates that the CO2 emissions from the river network were sustained by lateral inputs of CO2 (either from terra firme or from wetlands). The pCO2 and CH4 values decreased and %O2 increased with increasing Strahler order, showing that stream size explains part of the spatial variability of these quantities. In addition, several lines of evidence indicate that lateral inputs of carbon from wetlands (flooded forest and aquatic macrophytes) were of paramount importance in sustaining high CO2 and CH4 concentrations in the Congo river network, as well as driving spatial variations: the rivers draining the Cuvette Centrale Congolaise (CCC) (a giant wetland of flooded forest in the core of the Congo basin) were characterized by significantly higher pCO2 and CH4 and significantly lower %O2 and %N2O values than those not draining the CCC; pCO2 and %O2 values were correlated to the coverage of flooded forest on the catchment. The flux of GHGs between rivers and the atmosphere averaged 2,469 mmol m−2 d−1 for CO2 (range 86 and 7,110 mmol m−2 d−1), 12,553 µmol m−2 d−1 for CH4 (range 65 and 597,260 µmol m−2 d−1), 22 µmol m−2 d−1 for N2O (range −52 and 319 µmol m−2 d−1). The estimate of integrated CO2 emission from the Congo River network (251 TgC (1012 gC) yr−1) corresponded to nearly half the CO2 emissions from tropical oceans globally (565 TgC yr−1) and was nearly two times the CO2 emissions from the tropical Atlantic Ocean (137 TgC yr−1). Moreover, the integrated CO2 emission from the Congo River network is more than three times higher than the estimate of terrestrial net ecosystem exchange (NEE) on the whole catchment (77 TgC yr−1). This shows that it is unlikely that the CO2 emissions from the river network were sustained by the hydrological carbon export from terra firme soils (typically very small compared to terrestrial NEE), but most likely, to a large extent, they were sustained by wetlands (with a much higher hydrological connectivity with rivers and streams).

© 2018 Author(s). Inland waters impart considerable influence on nutrient cycling and budget estimates across local, regional and global scales, whilst anthropogenic pressures, such as rising populations and the appropriation of land and water resources, are undoubtedly modulating the flux of carbon (C), nitrogen (N) and phosphorus (P) between terrestrial biomes to inland waters, and the subsequent flux of these nutrients to the marine and atmospheric domains. Here, we present a 2-year biogeochemical record (October 2011-December 2013) at biweekly sampling resolution for the lower Sabaki River, Kenya, and provide estimates for suspended sediment and nutrient export fluxes from the lower Sabaki River under pre-dam conditions, and in light of the approved construction of the Thwake Multipurpose Dam on its upper reaches (Athi River). Erratic seasonal variation was typical for most parameters, with generally poor correlation between discharge and material concentrations, and stable isotope values of C (δ13C) and N (δ15N). Although high total suspended matter (TSM) concentrations are reported here (up to ∼3.8 g L-1), peak concentrations of TSM rarely coincided with peak discharge. The contribution of particulate organic C (POC) to the TSM pool indicates a wide biannual variation in suspended sediment load from OC poor (0.3 %) to OC rich (14.9 %), with the highest %POC occurring when discharge is < 100 m3 s-1 and at lower TSM concentrations. The consistent 15N enrichment of the particulate nitrogen (PN) pool compared to other river systems indicates anthropogenic N loading is a year-round driver of N export from the Sabaki Basin. The lower Sabaki River was consistently oversaturated in dissolved methane (CH4; from 499 to 135 111 %) and nitrous oxide (N2O; 100 to 463 %) relative to atmospheric concentrations. Wet season flows (October-December and March-May) carried > 80 % of the total load for TSM (∼ 86 %), POC (∼89 %), dissolved organic carbon (DOC; ∼ 81 %), PN (∼ 89 %) and particulate phosphorus (TPP; ∼82 %), with > 50 % of each fraction exported during the long wet season (March-May). Our estimated sediment yield (85 Mg km-2 yr-1) is relatively low on the global scale and is considerably less than the recently reported average sediment yield of ∼ 630 Mg km-2 yr-1 for African river basins. Regardless, sediment and OC yields were all at least equivalent or greater than reported yields for the neighbouring dammed Tana River. Rapid pulses of heavily 13C-enriched POC coincided with peak concentrations of PN, ammonium, CH4 and low dissolved oxygen saturation, suggesting that large mammalian herbivores (e.g. hippopotami) may mediate the delivery of C4 organic matter to the river during the dry season. Given recent projections for increasing dissolved nutrient export from African rivers, as well as the planned damming of the Athi River, these first estimates of material fluxes from the Sabaki River provide base-line data for future research initiatives assessing anthropogenic perturbation of the Sabaki Basin. ispartof: Biogeosciences vol:15 issue:6 pages:1683-1700 status: published

We investigated anaerobic nitrogen (N) cycling in the water column of Lake Kivu, a deep meromictic tropical lake in East Africa. Data were collected at one station in the Northern Basin and one in the Southern Basin, during two sampling campaigns (June 2011—dry season, and February 2012—rainy season). Short‐term incubations of sulfide‐free water with 15N‐labeled substrates revealed high potential denitrification and dissimilatory nitrate reduction to ammonium (DNRA) rates (up to 350 and 36 nmol N produced L−1 h−1, respectively), while anaerobic ammonium oxidation (anammox) was lower (up to 3.3 nmol N produced L−1 h−1). However, anammox rates were 15 nmol N produced L−1 h−1 when 15 NH4+ was added at depths where NH4+ concentrations were very low (< 1 μmol L−1). With the addition of 5 μmol L−1 of 15 NO3- and 10 μmol L−1 of H2S, denitrification and anammox were stimulated in the Northern Basin, while the increase of DNRA rates was less notable. In the Southern Basin, the addition of H2S decreased denitrification rates, probably because of competition with DNRA, which increased, while no effect was observed on anammox. This study puts into evidence the co‐occurrence of denitrification, anammox and DNRA, for the first time in a great tropical lake, and underlines the spatial heterogeneity of these processes. Contrary to numerous reports in literature, we show that anammox can significantly occur in presence of H2S, suggesting that the contribution of anammox in the N cycle may be underestimated.

nrpages: 151 status: published