1. Genome Mining of Novel Targets and Construction of Ladder-shaped melting temperature isothermal amplification Assays for the Identification of Cronobacter sakazakii and Cronobacter malonaticus .
- Author
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Ma D, Deng L, Huang L, Peng A, Bi W, and Li R
- Subjects
- Genome, Bacterial, Infant Formula microbiology, Food Microbiology, Humans, Food Contamination analysis, Limit of Detection, Molecular Diagnostic Techniques methods, Naphthalenesulfonates, Nucleic Acid Amplification Techniques methods, Cronobacter sakazakii genetics, Cronobacter sakazakii isolation & purification, Cronobacter sakazakii classification, Cronobacter genetics, Cronobacter isolation & purification, Cronobacter classification, DNA, Bacterial genetics
- Abstract
Cronobacter species are potential pathogens that can contaminate powdered infant formula. C. sakazakii and C. malonaticus are the most common species of Cronobacter associated with infections. This study mined new molecular targets for the detection of C. sakazakii and C. malonaticus by using comparative genome approaches. Specific target genes mngB and ompR were obtained and used to detect C. sakazakii and C. malonaticus, respectively. A novel detection method, termed ladder-shape melting temperature isothermal amplification (LMTIA), was developed and evaluated. The detection limit for pure C. sakazakii DNA was 1 pg per reaction and 1 fg per reaction for C. malonaticus . The C. sakazakii , C. malonaticus , and the reference stains were all correctly identified. The amplicons can be successfully visualized and identified by naked eyes when hydroxy naphthol blue dye (HNB dye) was used in the reaction. Therefore, the LMTIA assays developed in this study showed potential application for microorganism identification and detection.
- Published
- 2024
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