226 results on '"Cosgrove DJ"'
Search Results
2. A Study of Stump-jump Plow Mechanisms - Pivot Moment and Friction Aspects
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Conference on Agricultural Engineering (1984 : Bundaberg, Qld.), Quick, GR, Brown, GA, and Cosgrove, DJ
- Published
- 1984
3. THE ISOLATION OF MYOINOSITOL PENTAPHOSPHATES FROM HYDROLYSATES OF PHYTIC ACID
- Author
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Cosgrove Dj
- Subjects
Chromatography ,Phytic acid ,Phosphoric monoester hydrolases ,Chemical Phenomena ,Phytic Acid ,Chemistry ,Research ,Applied Mathematics ,General Mathematics ,Phosphatase ,Articles ,Isolation (microbiology) ,Phosphoric Monoester Hydrolases ,Hydrolysate ,Phosphates ,chemistry.chemical_compound ,Barium ,Inositol ,Ion Exchange Resins ,Ion-exchange resin - Published
- 1963
4. The chemical nature of soil organic phosphorus. I. Inositol phosphates
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Cosgrove, DJ
- Abstract
Gradient elution chromatography, using a column of anion exchange resin, Dowex AG I-X8, has been used to separate and isolate constituents of the 'phytin' fraction of soil organic matter. In addition to the commonly occurring myoinositol hexaphosphate the presence of the corresponding derivatives of DL-inositol and scylloinositol was demonstrated. Of the lower inositol phosphates present pentaphosphates appeared to be the major constituents. The occurrence in nature of inositols, other than the myoinositol, as phosphorylated derivatives, has not previously been recorded. Present knowledge is insufficient to decide whether soil inositol phosphates are of plant origin or accumulated through the activities of soil microorganisms.
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- 1963
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5. Inositol Phosphate Phosphatases of Microbiological Origin. Some Properties of the Partially Purified Phosphatases of Aspergillus ficuum NRRL 3135
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Irving, GCJ, primary and Cosgrove, DJ, additional
- Published
- 1974
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6. The chemical nature of soil organic phosphorus. I. Inositol phosphates
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Cosgrove, DJ, primary
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- 1963
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7. Inositol Phosphate Phosphatases of Microbiological Origin. Some Properties of a Partially Purified Bacterial (Pseudomonas Sp.) Phytase
- Author
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Irving, GCJ, primary and Cosgrove, DJ, additional
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- 1971
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8. Inositol Phosphate Phosphatases of Microbiological Origin. The Isolation of Soil Bacteria Having Inositol Phosphate Phosphatase Activity
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Cosgrove, DJ, primary, Irving, GCJ, additional, and Bromfield, SM, additional
- Published
- 1970
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9. Inositol Phosphate Phosphatases of Microbiological Origin. Inositol Phosphate Intermediates in the Dephosphorylation of the Hexaphosphates of Myo-Inositol, Scyllo-Inositol, and D-Chiro-Inositol by a Bacterial (Pseudomonas sp.) Phytase
- Author
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Cosgrove, DJ, primary
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- 1970
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10. Inositol Phosphate Phosphatases of Microbiological Origin.Observations on the Nature of the Active Centre of a Bacterial (Pseudomonas Sp.) Phytase
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Irving, GCJ, primary and Cosgrove, DJ, additional
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- 1971
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11. How Many Glucan Chains Form Plant Cellulose Microfibrils? A Mini Review.
- Author
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Cosgrove DJ, Dupree P, Gomez ED, Haigler CH, Kubicki JD, and Zimmer J
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- Cell Wall chemistry, Cell Wall metabolism, Plants chemistry, Plants metabolism, Glucosyltransferases chemistry, Glucosyltransferases metabolism, Magnetic Resonance Spectroscopy methods, Cellulose chemistry, Glucans chemistry, Microfibrils chemistry
- Abstract
Assessing the number of glucan chains in cellulose microfibrils (CMFs) is crucial for understanding their structure-property relationships and interactions within plant cell walls. This Review examines the conclusions and limitations of the major experimental techniques that have provided insights into this question. Small-angle X-ray and neutron scattering data predominantly support an 18-chain model, although analysis is complicated by factors such as fibril coalescence and matrix polysaccharide associations. Solid-state nuclear magnetic resonance (NMR) spectroscopy allows the estimation of the CMF width from the ratio of interior to surface glucose residues. However, there is uncertainty in the assignment of NMR spectral peaks to surface or interior chains. Freeze-fracture transmission electron microscopy images show cellulose synthase complexes to be "rosettes" of six lobes each consistent with a trimer of cellulose synthase enzymes, consistent with the synthesis of 18 parallel glucan chains in the CMF. Nevertheless, the number of chains in CMFs remains to be conclusively demonstrated.
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- 2024
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12. The structure and interaction of polymers affects secondary cell wall banding patterns in Arabidopsis.
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Pfaff SA, Wagner ER, and Cosgrove DJ
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- Cell Transdifferentiation, Mutation, Gene Expression Regulation, Plant, Transcription Factors, Arabidopsis genetics, Arabidopsis metabolism, Cell Wall metabolism, Xylem metabolism, Xylem genetics, Xylem cytology, Xylans metabolism, Arabidopsis Proteins metabolism, Arabidopsis Proteins genetics, Protoplasts metabolism, Cellulose metabolism, Lignin metabolism
- Abstract
Xylem tracheary elements (TEs) synthesize patterned secondary cell walls (SCWs) to reinforce against the negative pressure of water transport. VASCULAR-RELATED NAC-DOMAIN 7 (VND7) induces differentiation, accompanied by cellulose, xylan, and lignin deposition into banded domains. To investigate the effect of polymer biosynthesis mutations on SCW patterning, we developed a method to induce tracheary element transdifferentiation of isolated protoplasts, by transient transformation with VND7. Our data showed that proper xylan elongation is necessary for distinct cellulose bands, cellulose-xylan interactions are essential for coincident polymer patterns, and cellulose deposition is needed to override the intracellular organization that yields unique xylan patterns. These data indicate that a properly assembled cell wall network acts as a scaffold to direct polymer deposition into distinctly banded domains. We describe the transdifferentiation of protoplasts into TEs, providing an avenue to study patterned SCW biosynthesis in a tissue-free environment and in various mutant backgrounds., Competing Interests: Conflict of interest statement. None declared., (© The Author(s) 2024. Published by Oxford University Press on behalf of American Society of Plant Biologists. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
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- 2024
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13. Review of: Plant Cell Walls - Research Milestones and Conceptual Insights.
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Cosgrove DJ
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- 2024
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14. Plant Cell Wall Loosening by Expansins.
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Cosgrove DJ
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- Plants metabolism, Cellulose metabolism, Plant Cells metabolism, Cell Wall metabolism, Plant Proteins metabolism, Plant Proteins genetics
- Abstract
Expansins comprise an ancient group of cell wall proteins ubiquitous in land plants and their algal ancestors. During cell growth, they facilitate passive yielding of the wall's cellulose networks to turgor-generated tensile stresses, without evidence of enzymatic activity. Expansins are also implicated in fruit softening and other developmental processes and in adaptive responses to environmental stresses and pathogens. The major expansin families in plants include α-expansins (EXPAs), which act on cellulose-cellulose junctions, and β-expansins, which can act on xylans. EXPAs mediate acid growth, which contributes to wall enlargement by auxin and other growth agents. The genomes of diverse microbes, including many plant pathogens, also encode expansins designated expansin-like X. Expansins are proposed to disrupt noncovalent bonding between laterally aligned polysaccharides (notably cellulose), facilitating wall loosening for a variety of biological roles.
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- 2024
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15. Dynamic Structural Change of Plant Epidermal Cell Walls under Strain.
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Yu J, Del Mundo JT, Freychet G, Zhernenkov M, Schaible E, Gomez EW, Gomez ED, and Cosgrove DJ
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- Microfibrils chemistry, X-Ray Diffraction, Scattering, Small Angle, Onions cytology, Onions chemistry, Stress, Mechanical, Cell Wall chemistry, Cell Wall ultrastructure, Plant Epidermis cytology, Plant Epidermis chemistry, Microscopy, Atomic Force, Cellulose chemistry
- Abstract
The molecular foundations of epidermal cell wall mechanics are critical for understanding structure-function relationships of primary cell walls in plants and facilitating the design of bioinspired materials. To uncover the molecular mechanisms regulating the high extensibility and strength of the cell wall, the onion epidermal wall is stretched uniaxially to various strains and cell wall structures from mesoscale to atomic scale are characterized. Upon longitudinal stretching to high strain, epidermal walls contract in the transverse direction, resulting in a reduced area. Atomic force microscopy shows that cellulose microfibrils exhibit orientation-dependent rearrangements at high strains: longitudinal microfibrils are straightened out and become highly ordered, while transverse microfibrils curve and kink. Small-angle X-ray scattering detects a 7.4 nm spacing aligned along the stretch direction at high strain, which is attributed to distances between individual cellulose microfibrils. Furthermore, wide-angle X-ray scattering reveals a widening of (004) lattice spacing and contraction of (200) lattice spacing in longitudinally aligned cellulose microfibrils at high strain, which implies longitudinal stretching of the cellulose crystal. These findings provide molecular insights into the ability of the wall to bear additional load after yielding: the aggregation of longitudinal microfibrils impedes sliding and enables further stretching of the cellulose to bear increased loads., (© 2024 The Authors. Small published by Wiley‐VCH GmbH.)
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- 2024
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16. Mechanobiology: Shaping the future of cellular form and function.
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Nelson CM, Xiao B, Wickström SA, Dufrêne YF, Cosgrove DJ, Heisenberg CP, Dupont S, Shyer AE, Rodrigues AR, Trepat X, and Diz-Muñoz A
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- Animals, Humans, Biomechanical Phenomena, Cell Shape, Mechanotransduction, Cellular, Biophysics
- Abstract
Mechanobiology-the field studying how cells produce, sense, and respond to mechanical forces-is pivotal in the analysis of how cells and tissues take shape in development and disease. As we venture into the future of this field, pioneers share their insights, shaping the trajectory of future research and applications., Competing Interests: Declaration of interests S.A.W. is affiliated with the Stem Cells and Metabolism Research Program and the Helsinki Institute of Life Science at the University of Helsinki., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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17. Structure and growth of plant cell walls.
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Cosgrove DJ
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- Plant Proteins metabolism, Plant Development physiology, Plants metabolism, Polysaccharides metabolism, Glucosyltransferases metabolism, Plant Growth Regulators metabolism, Signal Transduction, Cell Wall metabolism, Cellulose metabolism, Plant Cells metabolism
- Abstract
Plant cells build nanofibrillar walls that are central to plant growth, morphogenesis and mechanics. Starting from simple sugars, three groups of polysaccharides, namely, cellulose, hemicelluloses and pectins, with very different physical properties are assembled by the cell to make a strong yet extensible wall. This Review describes the physics of wall growth and its regulation by cellular processes such as cellulose production by cellulose synthase, modulation of wall pH by plasma membrane H
+ -ATPase, wall loosening by expansin and signalling by plant hormones such as auxin and brassinosteroid. In addition, this Review discusses the nuanced roles, properties and interactions of cellulose, matrix polysaccharides and cell wall proteins and describes how wall stress and wall loosening cooperatively result in cell wall growth., (© 2023. Springer Nature Limited.)- Published
- 2024
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18. Single-molecule tracking reveals dual front door/back door inhibition of Cel7A cellulase by its product cellobiose.
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Nong D, Haviland ZK, Zexer N, Pfaff SA, Cosgrove DJ, Tien M, Anderson CT, and Hancock WO
- Subjects
- Single Molecule Imaging methods, Catalytic Domain, Fungal Proteins metabolism, Fungal Proteins antagonists & inhibitors, Fungal Proteins chemistry, Cellobiose metabolism, Cellulase metabolism, Cellulase antagonists & inhibitors, Cellulose metabolism, Hypocreales enzymology, Hypocreales metabolism
- Abstract
Degrading cellulose is a key step in the processing of lignocellulosic biomass into bioethanol. Cellobiose, the disaccharide product of cellulose degradation, has been shown to inhibit cellulase activity, but the mechanisms underlying product inhibition are not clear. We combined single-molecule imaging and biochemical investigations with the goal of revealing the mechanism by which cellobiose inhibits the activity of Trichoderma reesei Cel7A, a well-characterized exo-cellulase. We find that cellobiose slows the processive velocity of Cel7A and shortens the distance moved per encounter; effects that can be explained by cellobiose binding to the product release site of the enzyme. Cellobiose also strongly inhibits the binding of Cel7A to immobilized cellulose, with a K
i of 2.1 mM. The isolated catalytic domain (CD) of Cel7A was also inhibited to a similar degree by cellobiose, and binding of an isolated carbohydrate-binding module to cellulose was not inhibited by cellobiose, suggesting that cellobiose acts on the CD alone. Finally, cellopentaose inhibited Cel7A binding at micromolar concentrations without affecting the enzyme's velocity of movement along cellulose. Together, these results suggest that cellobiose inhibits Cel7A activity both by binding to the "back door" product release site to slow activity and to the "front door" substrate-binding tunnel to inhibit interaction with cellulose. These findings point to strategies for engineering cellulases to reduce product inhibition and enhance cellulose degradation, supporting the growth of a sustainable bioeconomy., Competing Interests: Competing interests statement:The authors declare no competing interest.- Published
- 2024
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19. Top five unanswered questions in plant cell surface research.
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Boerjan W, Burlat V, Cosgrove DJ, Dunand C, Dupree P, Haas KT, Ingram G, Jamet E, Mohnen D, Moussu S, Peaucelle A, Persson S, Voiniciuc C, and Höfte H
- Abstract
Plant cell wall researchers were asked their view on what the major unanswered questions are in their field. This article summarises the feedback that was received from them in five questions. In this issue you can find equivalent syntheses for researchers working on bacterial, unicellular parasite and fungal systems., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Authors.)
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- 2024
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20. The nonlinear mechanics of highly extensible plant epidermal cell walls.
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Yu J, Zhang Y, and Cosgrove DJ
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- Cell Membrane, Pectins, Plant Epidermis, Cellulose chemistry, Cell Wall chemistry
- Abstract
Plant epidermal cell walls maintain the mechanical integrity of plants and restrict organ growth. Mechanical analyses can give insights into wall structure and are inputs for mechanobiology models of plant growth. To better understand the intrinsic mechanics of epidermal cell walls and how they may accommodate large deformations during growth, we analyzed a geometrically simple material, onion epidermal strips consisting of only the outer (periclinal) cell wall, ~7 μm thick. With uniaxial stretching by >40%, the wall showed complex three-phase stress-strain responses while cyclic stretching revealed reversible and irreversible deformations and elastic hysteresis. Stretching at varying strain rates and temperatures indicated the wall behaved more like a network of flexible cellulose fibers capable of sliding than a viscoelastic composite with pectin viscosity. We developed an analytic framework to quantify nonlinear wall mechanics in terms of stiffness, deformation, and energy dissipation, finding that the wall stretches by combined elastic and plastic deformation without compromising its stiffness. We also analyzed mechanical changes in slightly dehydrated walls. Their extension became stiffer and more irreversible, highlighting the influence of water on cellulose stiffness and sliding. This study offers insights into the structure and deformation modes of primary cell walls and presents a framework that is also applicable to tissues and whole organs., Competing Interests: Competing interests statement:The authors declare no competing interest.
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- 2024
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21. Tissue-specific directionality of cellulose synthase complex movement inferred from cellulose microfibril polarity in secondary cell walls of Arabidopsis.
- Author
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Choi J, Makarem M, Lee C, Lee J, Kiemle S, Cosgrove DJ, and Kim SH
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- Microfibrils chemistry, Cellulose chemistry, Cell Wall chemistry, Arabidopsis chemistry
- Abstract
In plant cells, cellulose synthase complexes (CSCs) are nanoscale machines that synthesize and extrude crystalline cellulose microfibrils (CMFs) into the apoplast where CMFs are assembled with other matrix polymers into specific structures. We report the tissue-specific directionality of CSC movements of the xylem and interfascicular fiber walls of Arabidopsis stems, inferred from the polarity of CMFs determined using vibrational sum frequency generation spectroscopy. CMFs in xylems are deposited in an unidirectionally biased pattern with their alignment axes tilted about 25° off the stem axis, while interfascicular fibers are bidirectional and highly aligned along the longitudinal axis of the stem. These structures are compatible with the design of fiber-reinforced composites for tubular conduit and support pillar, respectively, suggesting that during cell development, CSC movement is regulated to produce wall structures optimized for cell-specific functions., (© 2023. The Author(s).)
- Published
- 2023
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22. Regiospecific Cellulose Orientation and Anisotropic Mechanical Property in Plant Cell Walls.
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Lee J, Choi J, Feng L, Yu J, Zheng Y, Zhang Q, Lin YT, Sah S, Gu Y, Zhang S, Cosgrove DJ, and Kim SH
- Subjects
- Anisotropy, Microfibrils chemistry, Cell Wall chemistry, Cellulose chemistry, Plant Cells
- Abstract
Cellulose microfibrils (CMFs) are a major load-bearing component in plant cell walls. Thus, their structures have been studied extensively with spectroscopic and microscopic characterization methods, but the findings from these two approaches were inconsistent, which hampers the mechanistic understanding of cell wall mechanics. Here, we report the regiospecific assembly of CMFs in the periclinal wall of plant epidermal cells. Using sum frequency generation spectroscopic imaging, we found that CMFs are highly aligned in the cell edge region where two cells form a junction, whereas they are mostly isotropic on average throughout the wall thickness in the flat face region of the epidermal cell. This subcellular-level heterogeneity in the CMF alignment provided a new perspective on tissue-level anisotropy in the tensile modulus of cell wall materials. This finding also has resolved a previous contradiction between the spectroscopic and microscopic imaging studies, which paves a foundation for better understanding of the cell wall architecture, especially structure-geometry relationships.
- Published
- 2023
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23. Grazing-incidence diffraction reveals cellulose and pectin organization in hydrated plant primary cell wall.
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Del Mundo JT, Rongpipi S, Yang H, Ye D, Kiemle SN, Moffitt SL, Troxel CL, Toney MF, Zhu C, Kubicki JD, Cosgrove DJ, Gomez EW, and Gomez ED
- Subjects
- Incidence, Cell Wall chemistry, Cell Membrane, Plants, X-Ray Diffraction, Cellulose chemistry, Pectins chemistry
- Abstract
The primary cell wall is highly hydrated in its native state, yet many structural studies have been conducted on dried samples. Here, we use grazing-incidence wide-angle X-ray scattering (GIWAXS) with a humidity chamber, which enhances scattering and the signal-to-noise ratio while keeping outer onion epidermal peels hydrated, to examine cell wall properties. GIWAXS of hydrated and dried onion reveals that the cellulose ([Formula: see text]) lattice spacing decreases slightly upon drying, while the (200) lattice parameters are unchanged. Additionally, the ([Formula: see text]) diffraction intensity increases relative to (200). Density functional theory models of hydrated and dry cellulose microfibrils corroborate changes in crystalline properties upon drying. GIWAXS also reveals a peak that we attribute to pectin chain aggregation. We speculate that dehydration perturbs the hydrogen bonding network within cellulose crystals and collapses the pectin network without affecting the lateral distribution of pectin chain aggregates., (© 2023. The Author(s).)
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- 2023
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24. The mechanics of plant morphogenesis.
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Coen E and Cosgrove DJ
- Subjects
- Cell Wall, Computer Simulation, Plant Cells, Stress, Mechanical, Cellulose, Morphogenesis genetics, Plant Development genetics, Plants anatomy & histology, Plants genetics, Gene Expression Regulation, Plant, Gene Expression Regulation, Developmental
- Abstract
Understanding the mechanism by which patterned gene activity leads to mechanical deformation of cells and tissues to create complex forms is a major challenge for developmental biology. Plants offer advantages for addressing this problem because their cells do not migrate or rearrange during morphogenesis, which simplifies analysis. We synthesize results from experimental analysis and computational modeling to show how mechanical interactions between cellulose fibers translate through wall, cell, and tissue levels to generate complex plant tissue shapes. Genes can modify mechanical properties and stresses at each level, though the values and pattern of stresses differ from one level to the next. The dynamic cellulose network provides elastic resistance to deformation while allowing growth through fiber sliding, which enables morphogenesis while maintaining mechanical strength.
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- 2023
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25. Loosenin-Like Proteins from Phanerochaete carnosa Impact Both Cellulose and Chitin Fiber Networks.
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Monschein M, Ioannou E, Koitto T, Al Amin LAKM, Varis JJ, Wagner ER, Mikkonen KS, Cosgrove DJ, and Master ER
- Subjects
- Chitin, Fungal Proteins genetics, Fungal Proteins metabolism, Bacterial Proteins genetics, Bacterial Proteins metabolism, Cellulose metabolism, Phanerochaete genetics
- Abstract
Microbial expansin-related proteins are ubiquitous across bacterial and fungal organisms and reportedly play a role in the modification and deconstruction of cell wall polysaccharides, including lignocellulose. So far, very few microbial expansin-related proteins, including loosenins and loosenin-like (LOOL) proteins, have been functionally characterized. Herein, four LOOLs encoded by Phanerochaete carnosa and belonging to different subfamilies (i.e., PcaLOOL7 and PcaLOOL9 from subfamily A and PcaLOOL2 and PcaLOOL12 from subfamily B) were recombinantly produced and the purified proteins were characterized using diverse cellulose and chitin substrates. The purified PcaLOOLs weakened cellulose filter paper and cellulose nanofibril networks (CNF); however, none significantly boosted cellulase activity on the selected cellulose substrates (Avicel and Whatman paper). Although fusing the family 63 carbohydrate-binding module (CBM63) of BsEXLX1 encoded by Bacillus subtilis to PcaLOOLs increased their binding to cellulose, the CBM63 fusion appeared to reduce the cellulose filter paper weakening observed using wild-type proteins. Binding of PcaLOOLs to alpha-chitin was considerably higher than that to cellulose (Avicel) and was pH dependent, with the highest binding at pH 5.0. Amendment of certain PcaLOOLs in fungal liquid cultivations also impacted the density of the cultivated mycelia. The present study reveals the potential of fungal expansin-related proteins to impact both cellulose and chitin networks and points to a possible biological role in fungal cell wall processing. IMPORTANCE The present study deepens investigations of microbial expansin-related proteins and their applied significance by (i) reporting a detailed comparison of diverse loosenins encoded by the same organism, (ii) considering both cellulosic and chitin-containing materials as targeted substrates, and (iii) investigating the impact of the C-terminal carbohydrate binding module (CBM) present in other expansin-related proteins on loosenin function. By revealing the potential of fungal loosenins to impact both cellulose and chitin-containing networks, our study reveals a possible biological and applied role of loosenins in fungal cell wall processing.
- Published
- 2023
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26. Biomechanical Weakening of Paper and Plant Cell Walls by Bacterial Expansins.
- Author
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Cosgrove DJ, Hepler NK, Wagner ER, and Durachko DM
- Subjects
- Cell Membrane metabolism, Plant Proteins metabolism, Bacteria metabolism, Cell Wall metabolism
- Abstract
Expansins are proteins that loosen plant cell walls but lack enzymatic activity. Here we describe two protocols tailored to measure the biomechanical activity of bacterial expansin. The first assay relies on the weakening of filter paper by expansin. The second assay is based on induction of creep (long-term, irreversible extension) of plant cell wall samples., (© 2023. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2023
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27. Detecting the orientation of newly-deposited crystalline cellulose with fluorescent CBM3.
- Author
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Pfaff SA, Wang X, Wagner ER, Wilson LA, Kiemle SN, and Cosgrove DJ
- Abstract
Cellulose microfibril patterning influences many of the mechanical attributes of plant cell walls. We developed a simple, fluorescence microscopy-based method to detect the orientation of newly-synthesized cellulose microfibrils in epidermal peels of onion and Arabidopsis. It is based on Alexa Fluor 488-tagged carbohydrate binding module 3a (CBM3a) from Clostridium thermocellum which displayed a nearly 4-fold greater binding to cell walls at pH 5.5 compared with pH 8. Binding to isolated cellulose did not display this pH dependence. At pH 7.5 fibrillar patterns at the surface of the epidermal peels were visible, corresponding to the directionality of surface cellulose microfibrils, as verified by atomic force microscopy. The fibrillar pattern was not visible as the labeling intensity increased at lower pH. The pH of greatest cell wall labeling corresponds to the isoelectric point of CBM3a, suggesting that electrostatic forces limit CBM3a penetration into the wall. Consistent with this, digestion of the wall with pectate lyase to remove homogalacturonan increased labeling intensity. We conclude that electrostatic interactions strongly influence labeling of cell walls with CBM3 and potentially other proteins, holding implications for any work that relies on penetration of protein probes such as CBMs, antibodies, or enzymes into charged polymeric substrates., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2022 The Authors. Published by Elsevier B.V.)
- Published
- 2022
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28. Leaf morphogenesis: The multifaceted roles of mechanics.
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Guo K, Huang C, Miao Y, Cosgrove DJ, and Hsia KJ
- Subjects
- Morphogenesis, Plant Leaves, Stress, Mechanical, Organogenesis, Plant, Plants
- Abstract
Plants produce a rich diversity of biological forms, and the diversity of leaves is especially notable. Mechanisms of leaf morphogenesis have been studied in the past two decades, with a growing focus on the interactive roles of mechanics in recent years. Growth of plant organs involves feedback by mechanical stress: growth induces stress, and stress affects growth and morphogenesis. Although much attention has been given to potential stress-sensing mechanisms and cellular responses, the mechanical principles guiding morphogenesis have not been well understood. Here we synthesize the overarching roles of mechanics and mechanical stress in multilevel and multiple stages of leaf morphogenesis, encompassing leaf primordium initiation, phyllotaxis and venation patterning, and the establishment of complex mature leaf shapes. Moreover, the roles of mechanics at multiscale levels, from subcellular cytoskeletal molecules to single cells to tissues at the organ scale, are articulated. By highlighting the role of mechanical buckling in the formation of three-dimensional leaf shapes, this review integrates the perspectives of mechanics and biology to provide broader insights into the mechanobiology of leaf morphogenesis., (Copyright © 2022 The Author. Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
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29. Building an extensible cell wall.
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Cosgrove DJ
- Subjects
- Cellulose metabolism, Pectins metabolism, Cell Wall metabolism, Xylans metabolism
- Abstract
This article recounts, from my perspective of four decades in this field, evolving paradigms of primary cell wall structure and the mechanism of surface enlargement of growing cell walls. Updates of the structures, physical interactions, and roles of cellulose, xyloglucan, and pectins are presented. This leads to an example of how a conceptual depiction of wall structure can be translated into an explicit quantitative model based on molecular dynamics methods. Comparison of the model's mechanical behavior with experimental results provides insights into the molecular basis of complex mechanical behaviors of primary cell wall and uncovers the dominant role of cellulose-cellulose interactions in forming a strong yet extensible network., (© The Author(s) 2022. Published by Oxford University Press on behalf of American Society of Plant Biologists.)
- Published
- 2022
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30. A rich and bountiful harvest: Key discoveries in plant cell biology.
- Author
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Cheung AY, Cosgrove DJ, Hara-Nishimura I, Jürgens G, Lloyd C, Robinson DG, Staehelin LA, and Weijers D
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- Cell Biology, Cell Wall, Cytokinesis, Cytoskeleton, Plant Cells, Plant Physiological Phenomena, Signal Transduction
- Abstract
The field of plant cell biology has a rich history of discovery, going back to Robert Hooke's discovery of cells themselves. The development of microscopes and preparation techniques has allowed for the visualization of subcellular structures, and the use of protein biochemistry, genetics, and molecular biology has enabled the identification of proteins and mechanisms that regulate key cellular processes. In this review, seven senior plant cell biologists reflect on the development of this research field in the past decades, including the foundational contributions that their teams have made to our rich, current insights into cell biology. Topics covered include signaling and cell morphogenesis, membrane trafficking, cytokinesis, cytoskeletal regulation, and cell wall biology. In addition, these scientists illustrate the pathways to discovery in this exciting research field., (© The Author(s) 2021. Published by Oxford University Press on behalf of American Society of Plant Biologists.)
- Published
- 2022
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31. Conservation of endo-glucanase 16 (EG16) activity across highly divergent plant lineages.
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Behar H, Tamura K, Wagner ER, Cosgrove DJ, and Brumer H
- Subjects
- Amino Acid Sequence, Biocatalysis, Bryopsida enzymology, Cellulase chemistry, Cellulase metabolism, Evolution, Molecular, Glucans metabolism, Kinetics, Models, Molecular, Phylogeny, Plant Proteins chemistry, Plant Proteins metabolism, Plants classification, Plants enzymology, Protein Conformation, Sequence Homology, Amino Acid, Substrate Specificity, Xylans metabolism, beta-Glucans metabolism, Bryopsida genetics, Cellulase genetics, Plant Proteins genetics, Plants genetics
- Abstract
Plant cell walls are highly dynamic structures that are composed predominately of polysaccharides. As such, endogenous carbohydrate active enzymes (CAZymes) are central to the synthesis and subsequent modification of plant cells during morphogenesis. The endo-glucanase 16 (EG16) members constitute a distinct group of plant CAZymes, angiosperm orthologs of which were recently shown to have dual β-glucan/xyloglucan hydrolase activity. Molecular phylogeny indicates that EG16 members comprise a sister clade with a deep evolutionary relationship to the widely studied apoplastic xyloglucan endo-transglycosylases/hydrolases (XTH). A cross-genome survey indicated that EG16 members occur as a single ortholog across species and are widespread in early diverging plants, including the non-vascular bryophytes, for which functional data were previously lacking. Remarkably, enzymological characterization of an EG16 ortholog from the model moss Physcomitrella patens (PpEG16) revealed that EG16 activity and sequence/structure are highly conserved across 500 million years of plant evolution, vis-à-vis orthologs from grapevine and poplar. Ex vivo biomechanical assays demonstrated that the application of EG16 gene products caused abrupt breakage of etiolated hypocotyls rather than slow extension, thereby indicating a mode-of-action distinct from endogenous expansins and microbial endo-glucanases. The biochemical data presented here will inform future genomic, genetic, and physiological studies of EG16 enzymes., (© 2021 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.)
- Published
- 2021
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32. Molecular insights into the complex mechanics of plant epidermal cell walls.
- Author
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Zhang Y, Yu J, Wang X, Durachko DM, Zhang S, and Cosgrove DJ
- Subjects
- Biomechanical Phenomena, Carbohydrate Conformation, Elasticity, Models, Biological, Molecular Dynamics Simulation, Onions ultrastructure, Stress, Mechanical, Cell Wall physiology, Cell Wall ultrastructure, Cellulose chemistry, Plant Cells ultrastructure, Plant Epidermis ultrastructure, Polysaccharides
- Abstract
Plants have evolved complex nanofibril-based cell walls to meet diverse biological and physical constraints. How strength and extensibility emerge from the nanoscale-to-mesoscale organization of growing cell walls has long been unresolved. We sought to clarify the mechanical roles of cellulose and matrix polysaccharides by developing a coarse-grained model based on polymer physics that recapitulates aspects of assembly and tensile mechanics of epidermal cell walls. Simple noncovalent binding interactions in the model generate bundled cellulose networks resembling that of primary cell walls and possessing stress-dependent elasticity, stiffening, and plasticity beyond a yield threshold. Plasticity originates from fibril-fibril sliding in aligned cellulose networks. This physical model provides quantitative insight into fundamental questions of plant mechanobiology and reveals design principles of biomaterials that combine stiffness with yielding and extensibility., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2021
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33. Expanding wheat yields with expansin.
- Author
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Cosgrove DJ
- Subjects
- Edible Grain, Seeds, Ectopic Gene Expression, Triticum
- Published
- 2021
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34. Saccharide analysis of onion outer epidermal walls.
- Author
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Wilson LA, Deligey F, Wang T, and Cosgrove DJ
- Abstract
Background: Epidermal cell walls have special structural and biological roles in the life of the plant. Typically they are multi-ply structures encrusted with waxes and cutin which protect the plant from dehydration and pathogen attack. These characteristics may also reduce chemical and enzymatic deconstruction of the wall for sugar analysis and conversion to biofuels. We have assessed the saccharide composition of the outer epidermal wall of onion scales with different analytical methods. This wall is a particularly useful model for cell wall imaging and mechanics., Results: Epidermal walls were depolymerized by acidic methanolysis combined with 2M trifluoracetic acid hydrolysis and the resultant sugars were analyzed by high-performance anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Total sugar yields based on wall dry weight were low (53%). Removal of waxes with chloroform increased the sugar yields to 73% and enzymatic digestion did not improve these yields. Analysis by gas chromatography/mass spectrometry (GC/MS) of per-O-trimethylsilyl (TMS) derivatives of the sugar methyl glycosides produced by acidic methanolysis gave a high yield for galacturonic acid (GalA) but glucose (Glc) was severely reduced. In a complementary fashion, GC/MS analysis of methyl alditols produced by permethylation gave substantial yields for glucose and other neutral sugars, but GalA was severely reduced. Analysis of the walls by
13 C solid-state NMR confirmed and extended these results and revealed 15% lipid content after chloroform extraction (potentially cutin and unextractable waxes)., Conclusions: Although exact values vary with the analytical method, our best estimate is that polysaccharide in the outer epidermal wall of onion scales is comprised of homogalacturonan (~ 50%), cellulose (~ 20%), galactan (~ 10%), xyloglucan (~ 10%) and smaller amounts of other polysaccharides. Low yields of specific monosaccharides by some methods may be exaggerated in epidermal walls impregnated with waxes and cutin and call for cautious interpretation of the results.- Published
- 2021
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35. Author Correction: Nanoscale movements of cellulose microfibrils in primary cell walls.
- Author
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Zhang T, Vavylonis D, Durachko DM, and Cosgrove DJ
- Published
- 2020
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36. Mutations in the Pectin Methyltransferase QUASIMODO2 Influence Cellulose Biosynthesis and Wall Integrity in Arabidopsis.
- Author
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Du J, Kirui A, Huang S, Wang L, Barnes WJ, Kiemle SN, Zheng Y, Rui Y, Ruan M, Qi S, Kim SH, Wang T, Cosgrove DJ, Anderson CT, and Xiao C
- Subjects
- Arabidopsis genetics, Arabidopsis growth & development, Arabidopsis metabolism, Arabidopsis Proteins genetics, Cell Adhesion genetics, Cell Wall genetics, Cellulose genetics, Dinitrobenzenes pharmacology, Gene Expression Regulation, Plant, Hypocotyl cytology, Hypocotyl genetics, Hypocotyl growth & development, Methyltransferases genetics, Microtubules metabolism, Pectins biosynthesis, Pectins genetics, Pectins metabolism, Plant Cells drug effects, Plant Cells metabolism, Plants, Genetically Modified, Sulfanilamides pharmacology, Uronic Acids metabolism, Arabidopsis cytology, Arabidopsis Proteins metabolism, Cellulose biosynthesis, Methyltransferases metabolism, Mutation
- Abstract
Pectins are abundant in the cell walls of dicotyledonous plants, but how they interact with other wall polymers and influence wall integrity and cell growth has remained mysterious. Here, we verified that QUASIMODO2 (QUA2) is a pectin methyltransferase and determined that QUA2 is required for normal pectin biosynthesis. To gain further insight into how pectin affects wall assembly and integrity maintenance, we investigated cellulose biosynthesis, cellulose organization, cortical microtubules, and wall integrity signaling in two mutant alleles of Arabidopsis ( Arabidopsis thaliana ) QUA2 , qua2 and tsd2 In both mutants, crystalline cellulose content is reduced, cellulose synthase particles move more slowly, and cellulose organization is aberrant. NMR analysis shows higher mobility of cellulose and matrix polysaccharides in the mutants. Microtubules in mutant hypocotyls have aberrant organization and depolymerize more readily upon treatment with oryzalin or external force. The expression of genes related to wall integrity, wall biosynthesis, and microtubule stability is dysregulated in both mutants. These data provide insights into how homogalacturonan is methylesterified upon its synthesis, the mechanisms by which pectin functionally interacts with cellulose, and how these interactions are translated into intracellular regulation to maintain the structural integrity of the cell wall during plant growth and development., (© 2020 American Society of Plant Biologists. All rights reserved.)
- Published
- 2020
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37. Preferred crystallographic orientation of cellulose in plant primary cell walls.
- Author
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Ye D, Rongpipi S, Kiemle SN, Barnes WJ, Chaves AM, Zhu C, Norman VA, Liebman-Peláez A, Hexemer A, Toney MF, Roberts AW, Anderson CT, Cosgrove DJ, Gomez EW, and Gomez ED
- Subjects
- Arabidopsis chemistry, Bryopsida chemistry, Crystallography, Crystallography, X-Ray, Microfibrils chemistry, Cell Wall chemistry, Cellulose chemistry, Plants chemistry
- Abstract
Cellulose, the most abundant biopolymer on earth, is a versatile, energy rich material found in the cell walls of plants, bacteria, algae, and tunicates. It is well established that cellulose is crystalline, although the orientational order of cellulose crystallites normal to the plane of the cell wall has not been characterized. A preferred orientational alignment of cellulose crystals could be an important determinant of the mechanical properties of the cell wall and of cellulose-cellulose and cellulose-matrix interactions. Here, the crystalline structures of cellulose in primary cell walls of onion (Allium cepa), the model eudicot Arabidopsis (Arabidopsis thaliana), and moss (Physcomitrella patens) were examined through grazing incidence wide angle X-ray scattering (GIWAXS). We find that GIWAXS can decouple diffraction from cellulose and epicuticular wax crystals in cell walls. Pole figures constructed from a combination of GIWAXS and X-ray rocking scans reveal that cellulose crystals have a preferred crystallographic orientation with the (200) and (110)/([Formula: see text]) planes preferentially stacked parallel to the cell wall. This orientational ordering of cellulose crystals, termed texturing in materials science, represents a previously unreported measure of cellulose organization and contradicts the predominant hypothesis of twisting of microfibrils in plant primary cell walls.
- Published
- 2020
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38. Distinguishing Mesoscale Polar Order (Unidirectional vs Bidirectional) of Cellulose Microfibrils in Plant Cell Walls Using Sum Frequency Generation Spectroscopy.
- Author
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Makarem M, Nishiyama Y, Xin X, Durachko DM, Gu Y, Cosgrove DJ, and Kim SH
- Subjects
- Cellulose, Spectrum Analysis, Vibration, Cell Wall, Microfibrils
- Abstract
Cellulose in plant cell walls are synthesized as crystalline microfibrils with diameters of 3-4 nm and lengths of around 1-10 μm. These microfibrils are known to be the backbone of cell walls, and their multiscale three-dimensional organization plays a critical role in cell wall functions including plant growth and recalcitrance to degradation. The mesoscale organization of microfibrils over a 1-100 nm range in cell walls is challenging to resolve because most characterization techniques investigating this length scale suffer from low spatial resolution, sample preparation artifacts, or inaccessibility of specific cell types. Here, we report a sum frequency generation (SFG) study determining the mesoscale polarity of cellulose microfibrils in intact plant cell walls. SFG is a nonlinear optical spectroscopy technique sensitive to the molecular-to-mesoscale order of noncentrosymmetric domains in amorphous matrices. However, the quantitative theoretical model to unravel the effect of polarity in packing of noncentrosymmetric domains on SFG spectral features has remained unresolved. In this work, we show how the phase synchronization principle of the SFG process is used to predict the relative intensities of vibrational modes with different polar angles from the noncentrosymmetric domain axis. Applying this model calculation for the first time and employing SFG microscopy, we found that cellulose microfibrils in certain xylem cell walls are deposited unidirectionally (or biased in one direction) instead of the bidirectional polarity which was believed to be dominant in plant cell walls from volume-averaged characterizations of macroscopic samples. With this advancement in SFG analysis, one can now determine the relative polarity of noncentrosymmetric domains such as crystalline biopolymers interspersed in amorphous polymer matrices, which will open opportunities to study new questions that have not been conceived in the past.
- Published
- 2020
- Full Text
- View/download PDF
39. Plant Cell Growth: Do Pectins Drive Lobe Formation in Arabidopsis Pavement Cells?
- Author
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Cosgrove DJ and Anderson CT
- Subjects
- Cell Wall, Epitopes, Arabidopsis cytology, Pectins metabolism, Plant Epidermis physiology
- Abstract
Pectins are conventionally thought to form a gel-like matrix between stress-bearing cellulose microfibrils in growing plant cell walls. A new study proposes a more active role in driving wall expansion. How does the proposal stack up against current evidence?, (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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40. Cellulose synthase interactive1- and microtubule-dependent cell wall architecture is required for acid growth in Arabidopsis hypocotyls.
- Author
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Xin X, Lei L, Zheng Y, Zhang T, Pingali SV, O'Neill H, Cosgrove DJ, Li S, and Gu Y
- Subjects
- Carrier Proteins, Glucosyltransferases, Microfibrils, Arabidopsis genetics, Arabidopsis Proteins genetics, Cell Wall, Hypocotyl growth & development, Microtubules
- Abstract
Auxin-induced cell elongation relies in part on the acidification of the cell wall, a process known as acid growth that presumably triggers expansin-mediated wall loosening via altered interactions between cellulose microfibrils. Cellulose microfibrils are a major determinant for anisotropic growth and they provide the scaffold for cell wall assembly. Little is known about how acid growth depends on cell wall architecture. To explore the relationship between acid growth-mediated cell elongation and plant cell wall architecture, two mutants (jia1-1 and csi1-3) that are defective in cellulose biosynthesis and cellulose microfibril organization were analyzed. The study revealed that cell elongation is dependent on CSI1-mediated cell wall architecture but not on the overall crystalline cellulose content. We observed a correlation between loss of crossed-polylamellate walls and loss of auxin- and fusicoccin-induced cell growth in csi1-3. Furthermore, induced loss of crossed-polylamellate walls via disruption of cortical microtubules mimics the effect of csi1 in acid growth. We hypothesize that CSI1- and microtubule-dependent crossed-polylamellate walls are required for acid growth in Arabidopsis hypocotyls., (© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Published
- 2020
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41. Pectin methylesterase selectively softens the onion epidermal wall yet reduces acid-induced creep.
- Author
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Wang X, Wilson L, and Cosgrove DJ
- Subjects
- Cell Wall metabolism, Esterification, Pectins metabolism, Carboxylic Ester Hydrolases metabolism, Onions metabolism
- Abstract
De-esterification of homogalacturonan (HG) is thought to stiffen pectin gels and primary cell walls by increasing calcium cross-linking between HG chains. Contrary to this idea, recent studies found that HG de-esterification correlated with reduced stiffness of living tissues, measured by surface indentation. The physical basis of such apparent wall softening is unclear, but possibly involves complex biological responses to HG modification. To assess the direct physical consequences of HG de-esterification on wall mechanics without such complications, we treated isolated onion (Allium cepa) epidermal walls with pectin methylesterase (PME) and assessed wall biomechanics with indentation and tensile tests. In nanoindentation assays, PME action softened the wall (reduced the indentation modulus). In tensile force/extension assays, PME increased plasticity, but not elasticity. These softening effects are attributed, at least in part, to increased electrostatic repulsion and swelling of the wall after PME treatment. Despite softening and swelling upon HG de-esterification, PME treatment alone failed to induce cell wall creep. Instead, acid-induced creep, mediated by endogenous α-expansin, was reduced. We conclude that HG de-esterification physically softens the onion wall, yet reduces expansin-mediated wall extensibility., (© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Published
- 2020
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42. Non-enzymatic action of expansins.
- Author
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Cosgrove DJ
- Subjects
- Cell Wall, Glycosyltransferases, Hydrolysis, Plant Proteins, Cellulase
- Abstract
Competing Interests: The author declares that he has no conflicts of interest with the contents of this article.
- Published
- 2020
- Full Text
- View/download PDF
43. Global cellulose biomass, horizontal gene transfers and domain fusions drive microbial expansin evolution.
- Author
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Chase WR, Zhaxybayeva O, Rocha J, Cosgrove DJ, and Shapiro LR
- Subjects
- Biomass, Cell Wall, Phylogeny, Plant Proteins genetics, Cellulose, Gene Transfer, Horizontal
- Abstract
Plants must rearrange the network of complex carbohydrates in their cell walls during normal growth and development. To accomplish this, all plants depend on proteins called expansins that nonenzymatically loosen noncovalent bonding between cellulose microfibrils. Surprisingly, expansin genes have more recently been found in some bacteria and microbial eukaryotes, where their biological functions are largely unknown. Here, we reconstruct a comprehensive phylogeny of microbial expansin genes. We find these genes in all eukaryotic microorganisms that have structural cell wall cellulose, suggesting expansins evolved in ancient marine microorganisms long before the evolution of land plants. We also find expansins in an unexpectedly high diversity of bacteria and fungi that do not have cellulosic cell walls. These bacteria and fungi inhabit varied ecological contexts, mirroring the diversity of terrestrial and aquatic niches where plant and/or algal cellulosic cell walls are present. The microbial expansin phylogeny shows evidence of multiple horizontal gene transfer events within and between bacterial and eukaryotic microbial lineages, which may in part underlie their unusually broad phylogenetic distribution. Overall, expansins are unexpectedly widespread in bacteria and eukaryotes, and the contribution of these genes to microbial ecological interactions with plants and algae has probbaly been underappreciated., (© 2020 The Authors. New Phytologist © 2020 New Phytologist Trust.)
- Published
- 2020
- Full Text
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44. Anisotropic Motions of Fibrils Dictated by Their Orientations in the Lamella: A Coarse-Grained Model of a Plant Cell Wall.
- Author
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Mani S, Cosgrove DJ, and Voth GA
- Subjects
- Anisotropy, Cell Membrane, Cellulose, Cell Wall, Pectins
- Abstract
Plant cell walls are complex systems that exhibit the characteristics of both rigid and soft material depending on their external perturbations. The three main polymeric components in a plant primary cell wall are cellulose fibrils, hemicellulose, and pectins. These components interact in a hierarchical fashion giving rise to mesoscale structural features such as cellulose bundles, lamella stacking, and so on. Although several studies have focused on understanding these unique structural features, a clear picture linking them to cell wall mechanics is still lacking. As a first step toward this goal, a phenomenological model of plant cell wall has been developed in this work by using available experimental data to investigate the underlying connections between mesoscale structural features and the motions of fibrils during deformation. In this model cellulose fibrils exhibit motions such as angular reorientations and kinking upon forced stretching. These motions are dependent on the orientation of fibrils with respect to the stretch direction, i.e., fibrils that are at an angle to the stretch direction exhibit predominant angular reorientations, while fibrils transverse to the stretch direction undergo kinking as a result of transverse compression. Varying the chain length of pectin had negligible effects on these motions. One of the main contributions from this work is the development of a simple model that can be easily fine-tuned to test other hypotheses and extended to include additional experimental knowledge about the structural aspects of cell walls in the future.
- Published
- 2020
- Full Text
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45. Expansin gene loss is a common occurrence during adaptation to an aquatic environment.
- Author
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Hepler NK, Bowman A, Carey RE, and Cosgrove DJ
- Subjects
- Acclimatization, Environment, Evolution, Molecular, Magnoliopsida physiology, Multigene Family, Magnoliopsida genetics, Plant Proteins genetics
- Abstract
Expansins comprise a superfamily of plant cell wall loosening proteins that can be divided into four individual families (EXPA, EXPB, EXLA and EXLB). Aside from inferred roles in a variety of plant growth and developmental traits, little is known regarding the function of specific expansin clades, for which there are at least 16 in flowering plants (angiosperms); however, there is evidence to suggest that some expansins have cell-specific functions, in root hair and pollen tube development, for example. Recently, two duckweed genomes have been sequenced (Spirodela polyrhiza strains 7498 and 9509), revealing significantly reduced superfamily sizes. We hypothesized that there would be a correlation between expansin loss and morphological reductions seen among highly adapted aquatic species. In order to provide an answer to this question, we characterized the expansin superfamilies of the greater duckweed Spirodela, the marine eelgrass Zostera marina and the bladderwort Utricularia gibba. We discovered rampant expansin gene and clade loss among the three, including a complete absence of the EXLB family and EXPA-VII. The most convincing correlation between morphological reduction and expansin loss was seen for Utricularia and Spirodela, which both lack root hairs and the root hair expansin clade EXPA-X. Contrary to the pattern observed in other species, four Utricularia expansins failed to branch within any clade, suggesting that they may be the result of neofunctionalization. Last, an expansin clade previously discovered only in eudicots was identified in Spirodela, allowing us to conclude that the last common ancestor of monocots and eudicots contained a minimum of 17 expansins., (© 2019 The Authors. The Plant Journal © 2019 John Wiley & Sons Ltd.)
- Published
- 2020
- Full Text
- View/download PDF
46. High-Resolution Imaging of Cellulose Organization in Cell Walls by Field Emission Scanning Electron Microscopy.
- Author
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Zheng Y, Ning G, and Cosgrove DJ
- Subjects
- Image Processing, Computer-Assisted, Onions cytology, Onions ultrastructure, Plant Epidermis cytology, Plant Epidermis ultrastructure, Cell Wall ultrastructure, Cellulose ultrastructure, Microscopy, Electron, Scanning methods
- Abstract
Field emission scanning electron microscopy (FESEM) is a powerful tool for analyzing surface structures of biological and nonbiological samples. However, when it is used to study fine structures of nanometer-sized microfibrils of epidermal cell walls, one often encounters tremendous challenges to acquire clear and undistorted images because of two major issues: (1) Preparation of samples suitable for high resolution imaging; due to the delicateness of some plant materials, such as onion epidermal cell walls, many things can happen during sample processing, which subsequently result in damaged samples or introduce artifacts. (2) Difficulties to acquire clear images of samples which are electron-beam sensitive and prone to charging artifacts at magnifications over 100,000×. In this chapter we described detailed procedures for sample preparation and conditions for high-resolution FESEM imaging of onion epidermal cell walls. The methods can be readily adapted for other wall materials.
- Published
- 2020
- Full Text
- View/download PDF
47. Theory and Practice in Measuring In-Vitro Extensibility of Growing Plant Cell Walls.
- Author
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Cosgrove DJ
- Subjects
- Arabidopsis cytology, Biomechanical Phenomena, Cucumis sativus cytology, Elasticity, Protoplasts metabolism, Stress, Mechanical, Cell Wall metabolism, Plant Cells metabolism
- Abstract
This chapter summarizes four extensometer techniques for measuring cell wall extensibility in vitro and discusses how the results of these methods relate to the concept and ideal measurement of cell wall extensibility in the context of plant cell growth. These in-vitro techniques are particularly useful for studies of the molecular basis of cell wall extension. Measurements of breaking strength, elastic compliance and plastic compliance may be informative about changes in cell wall structure, whereas measurements of wall stress relaxation and creep are sensitive to both changes in wall structure and wall-loosening processes, such as those mediated by expansins and some lytic enzymes. A combination of methods is needed to obtain a broader view of cell wall behavior and properties connected with the concept of cell wall extensibility .
- Published
- 2020
- Full Text
- View/download PDF
48. Disentangling loosening from softening: insights into primary cell wall structure.
- Author
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Zhang T, Tang H, Vavylonis D, and Cosgrove DJ
- Subjects
- Cellulase, Cellulose, Elasticity, Fungal Proteins, Glycoside Hydrolases, Microfibrils, Microscopy, Atomic Force, Pectins chemistry, Polysaccharide-Lyases, Polysaccharides metabolism, Tensile Strength, Cell Wall chemistry, Cell Wall metabolism, Onions chemistry, Onions metabolism, Plant Cells metabolism
- Abstract
How cell wall elasticity, plasticity, and time-dependent extension (creep) relate to one another, to plant cell wall structure and to cell growth remain unsettled topics. To examine these issues without the complexities of living tissues, we treated cell-free strips of onion epidermal walls with various enzymes and other agents to assess which polysaccharides bear mechanical forces in-plane and out-of-plane of the cell wall. This information is critical for integrating concepts of wall structure, wall material properties, tissue mechanics and mechanisms of cell growth. With atomic force microscopy we also monitored real-time changes in the wall surface during treatments. Driselase, a potent cocktail of wall-degrading enzymes, removed cellulose microfibrils in superficial lamellae sequentially, layer-by-layer, and softened the wall (reduced its mechanical stiffness), yet did not induce wall loosening (creep). In contrast Cel12A, a bifunctional xyloglucanase/cellulase, induced creep with only subtle changes in wall appearance. Both Driselase and Cel12A increased the tensile compliance, but differently for elastic and plastic components. Homogalacturonan solubilization by pectate lyase and calcium chelation greatly increased the indentation compliance without changing tensile compliances. Acidic buffer induced rapid cell wall creep via endogenous α-expansins, with negligible effects on wall compliances. We conclude that these various wall properties are not tightly coupled and therefore reflect distinctive aspects of wall structure. Cross-lamellate networks of cellulose microfibrils influenced creep and tensile stiffness whereas homogalacturonan influenced indentation mechanics. This information is crucial for constructing realistic molecular models that define how wall mechanics and growth depend on primary cell wall structure., (© 2019 The Authors The Plant Journal © 2019 John Wiley & Sons Ltd.)
- Published
- 2019
- Full Text
- View/download PDF
49. Quantum Calculations on Plant Cell Wall Component Interactions.
- Author
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Yang H, Watts HD, Gibilterra V, Weiss TB, Petridis L, Cosgrove DJ, and Kubicki JD
- Subjects
- Cellulose chemistry, Chloroform chemistry, Glucose chemistry, Hydrogen Bonding, Methanol chemistry, Polysaccharides chemistry, Quantum Theory, Reproducibility of Results, Solvents chemistry, Thermodynamics, Water chemistry, Cell Wall chemistry, Lignin chemistry, Pectins chemistry, Plants chemistry, Xylans chemistry
- Abstract
Density functional theory calculations were performed to assess the relative interaction energies of plant cell wall components: cellulose, xylan, lignin and pectin. Monomeric and tetramer linear molecules were allowed to interact in four different configurations for each pair of compounds. The M05-2X exchange-correlation functional which implicitly accounts for short- and mid-range dispersion was compared against MP2 and RI-MP2 to assess the reliability of the former for modeling van der Waals forces between these PCW components. Solvation effects were examined by modeling the interactions in the gas phase, in explicit H
2 O, and in polarized continuum models (PCM) of solvation. PCMs were used to represent water, methanol, and chloroform. The results predict the relative ranges of each type of interaction and when specific configurations will be strongly preferred. Structures and energies are useful as a basis for testing classical force fields and as guidance for coarse-grained models of PCWs.- Published
- 2019
- Full Text
- View/download PDF
50. Directed in vitro evolution of bacterial expansin BsEXLX1 for higher cellulose binding and its consequences for plant cell wall-loosening activities.
- Author
-
Hepler NK and Cosgrove DJ
- Subjects
- Bacterial Proteins chemistry, Models, Molecular, Mutagenesis, Protein Binding, Protein Domains, Bacillus subtilis genetics, Bacterial Proteins genetics, Bacterial Proteins metabolism, Cell Wall metabolism, Cellulose metabolism, Directed Molecular Evolution, Plant Cells metabolism
- Abstract
Expansins are cell wall-loosening proteins found in all land plants and many microbial species. Despite homologous structures, bacterial expansins have much weaker cellulose binding and wall-loosening activity than plant expansins. We hypothesized stronger cellulose binding would result in greater wall-loosening activity and used in vitro evolution of Bacillus subtilis BsEXLX1 to test this hypothesis. Mutants with stronger binding generally had greater wall-loosening activity, but the relationship was nonlinear and plateaued at ~ 40% higher than wild-type. Mutant E191K exhibited stronger cellulose binding but failed to induce creep, evidently due to protein mistargeting. These results reveal the complexity of interactions between plant cell walls and wall-modifying proteins, an important consideration when engineering proteins for applications in biofuel production and plant pathogen resistance., (Published 2019. This article is a U.S. Government work and is in the public domain in the USA.)
- Published
- 2019
- Full Text
- View/download PDF
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