376 results on '"Cooper GJ"'
Search Results
2. General principles of biological hierarchical systems
- Author
-
Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, Zaffos, A, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Abstract
The hierarchy theory of evolution is ontologically committed to the existence of inherent nested hierarchies in nature and attempts to explain natural phenomena as a product of complex dynamics of biological systems in the context of scaling. The hierarchy theory of evolution adopts a model of two interconnected systems, corresponding to the dynamic and the informational aspects of life: (1) the economic, or ecological, compositional nested hierarchy that captures for dynamic interactions of entities within and across levels through upward and downward causation and (2) the genealogical, or reproductive, nested compositional hierarchy, which reflects the historical nature of biological systems stemming from the unidirectional control of information flow. Most generally, the economic and genealogical hierarchies represent, respectively, the spatial and temporal dimensions of the organic realm. Importantly, drawing an explicit distinction between the two types of hierarchies allows for elucidating causal relationships between them.
- Published
- 2016
3. Ecology and evolution: neither separate nor merged
- Author
-
Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, Zaffos, A, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Abstract
Hierarchy theory—conveniently acknowledged, generalized, expanded in time and taxonomical scope, and modified—is a standing candidate framework for the multiscale integration of ecology and evolution. In hierarchy theory, ecology continues to be a science of physical and chemical flows and cycles, a science of energy and matter transfers, a science of codetermination between biotic and abiotic (weather, soil, nutrients, geology) factors. In the dual hierarchy framework, ecology is, more generally, the science of interactions. A key methodological innovation in conceiving these interactions is network theory. The hierarchy perspective integrates ecology and evolution by studying and modeling how interactions determine a change in information content (the evolutionary hierarchy)
- Published
- 2016
4. Information and energy in biological hierarchical systems
- Author
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Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, Zaffos, A, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Abstract
We propose a substantive, admittedly restricted, notion of information that pertains to explaining biological evolution by satisfying the following criteria: the information must (1) have material basis, so it can be stored; (2) be amenable to copying (replicating); (3) be interpretable in the economic context of energy and matter flow (i.e., capable of eliciting a discriminating outcome when used); and (4) be distributed across levels of the genealogical hierarchy. Energy, or the capacity of a physical system to perform work, is a principal causal agent in evolution because the fluctuations in the flow of energy and matter through the entities in the economic hierarchy are causally responsible for the survival and differential propagation of the entities in the genealogical hierarchy of replicators, thus channeling or disrupting the flow of information that shapes the historical pattern of life.
- Published
- 2016
5. Systemic administration of adrenomedullin(27-52) increases bone volume and strength in male mice
- Author
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Cornish, J, primary, Callon, KE, additional, Bava, U, additional, Coy, DH, additional, Mulvey, TB, additional, Murray, MA, additional, Cooper, GJ, additional, and Reid, IR, additional
- Published
- 2001
- Full Text
- View/download PDF
6. Book review: Trauma: a scientific basis for care
- Author
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Watkins, PE, primary and Cooper, GJ, additional
- Published
- 2000
- Full Text
- View/download PDF
7. ANTICOAGULANT CONTROL IN THE FIRST THREE MONTHS AFTER MECHANICAL HEART VALVE REPLACEMENT
- Author
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Hsin, M, primary, Speight, J, additional, and Cooper, GJ, additional
- Published
- 1997
- Full Text
- View/download PDF
8. THE LIMA SUCCESS STORY — WHITHER OTHER ARTERIAL GRAFTS — ARE VEIN GRAFTS OBSOLETE ?
- Author
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Cooper, GJ, primary, Underwood, MJ, additional, and Deverall, PB, additional
- Published
- 1996
- Full Text
- View/download PDF
9. Locally Applied Tissue-Type Plasminogen Activator Enhances the Fibrinolytic Activity of Experimental Vein Grafts and Reduces Microthrombi Formation
- Author
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Underwood, MJ, primary, Cooper, GJ, additional, More, RS, additional, Toner, C, additional, Reynolds, P, additional, and De Bono, DP, additional
- Published
- 1995
- Full Text
- View/download PDF
10. Fibrinolytic Profiles of Experimental Vein Grafts
- Author
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Underwood, MJ, primary, Cooper, GJ, additional, Turner, C, additional, More, RS, additional, Reynolds, P, additional, Coumbe, A, additional, and De Bono, DP, additional
- Published
- 1994
- Full Text
- View/download PDF
11. Prediction of hepatitis C virus infectivity in seropositive Australian blood donors by supplemental immunoassays and detection of viral RNA
- Author
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Allain, JP, primary, Coghlan, PJ, additional, Kenrick, KG, additional, Whitson, K, additional, Keller, A, additional, Cooper, GJ, additional, Vallari, DS, additional, Delaney, SR, additional, and Kuhns, MC, additional
- Published
- 1991
- Full Text
- View/download PDF
12. Evaluation of the prehospital management road traffic fatalities in Victoria, Australia.
- Author
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McDermott FT, Cooper GJ, Hogan PL, Cordner SM, and Tremayne AB
- Published
- 2005
- Full Text
- View/download PDF
13. Physiologic responses to primary blast.
- Author
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Guy RJ, Kirkman E, Watkins PE, and Cooper GJ
- Published
- 1998
- Full Text
- View/download PDF
14. Ecology and evolution: neither separate nor merged
- Author
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Serrelli, E, Tëmkin, I, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Subjects
M-FIL/02 - LOGICA E FILOSOFIA DELLA SCIENZA ,Hierarchy theory, evolutionary theory, ecology, history of biology, history of ecology - Abstract
Hierarchy theory—conveniently acknowledged, generalized, expanded in time and taxonomical scope, and modified—is a standing candidate framework for the multiscale integration of ecology and evolution. In hierarchy theory, ecology continues to be a science of physical and chemical flows and cycles, a science of energy and matter transfers, a science of codetermination between biotic and abiotic (weather, soil, nutrients, geology) factors. In the dual hierarchy framework, ecology is, more generally, the science of interactions. A key methodological innovation in conceiving these interactions is network theory. The hierarchy perspective integrates ecology and evolution by studying and modeling how interactions determine a change in information content (the evolutionary hierarchy)
- Published
- 2016
15. General principles of biological hierarchical systems
- Author
-
Tëmkin, I, Serrelli, Emanuele, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Subjects
Evolutionary theory ,Hierarchy Theory ,Network Theory ,Biology ,Modeling ,Evolutionary theory, Hierarchy Theory, Network Theory, Biology, Modeling ,M-FIL/02 - LOGICA E FILOSOFIA DELLA SCIENZA ,Settore M-FIL/02 - LOGICA E FILOSOFIA DELLA SCIENZA - Abstract
The hierarchy theory of evolution is ontologically committed to the existence of inherent nested hierarchies in nature and attempts to explain natural phenomena as a product of complex dynamics of biological systems in the context of scaling. The hierarchy theory of evolution adopts a model of two interconnected systems, corresponding to the dynamic and the informational aspects of life: (1) the economic, or ecological, compositional nested hierarchy that captures for dynamic interactions of entities within and across levels through upward and downward causation and (2) the genealogical, or reproductive, nested compositional hierarchy, which reflects the historical nature of biological systems stemming from the unidirectional control of information flow. Most generally, the economic and genealogical hierarchies represent, respectively, the spatial and temporal dimensions of the organic realm. Importantly, drawing an explicit distinction between the two types of hierarchies allows for elucidating causal relationships between them.
- Published
- 2016
16. Information and energy in biological hierarchical systems
- Author
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Tëmkin, I, Serrelli, E, Allmon, WD, Angielczyk, KD, Brett, CE, Eldredge, N, Caianiello, S, Caponi, G, Cooper, GJ, El-Hani, CN, Elliott, TA, Gregory, TR, Lieberman, BS, Linquist, S, McKinney, ML, McShea, DW, Miller, AI, Miller III, W, Nunes-Neto, NF, Parravicini, A, Pavličev, M, Pievani, T, Prum, RO, Roopnarine, PD, Serrelli, E, Tëmkin, I, Tomlinson, G, Umerez, J, Wagner, GP, and Zaffos, A
- Subjects
M-FIL/02 - LOGICA E FILOSOFIA DELLA SCIENZA ,Evolutionary theory, Energy, Information, Hierarchy theory, Modeling - Abstract
We propose a substantive, admittedly restricted, notion of information that pertains to explaining biological evolution by satisfying the following criteria: the information must (1) have material basis, so it can be stored; (2) be amenable to copying (replicating); (3) be interpretable in the economic context of energy and matter flow (i.e., capable of eliciting a discriminating outcome when used); and (4) be distributed across levels of the genealogical hierarchy. Energy, or the capacity of a physical system to perform work, is a principal causal agent in evolution because the fluctuations in the flow of energy and matter through the entities in the economic hierarchy are causally responsible for the survival and differential propagation of the entities in the genealogical hierarchy of replicators, thus channeling or disrupting the flow of information that shapes the historical pattern of life.
- Published
- 2016
17. Patients have important roles in funding and dissemination too.
- Author
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Cooper GJ, Fowler C, Latham P, and Bicknell C
- Subjects
- Humans, United Kingdom, COVID-19 economics, COVID-19 epidemiology, Information Dissemination
- Abstract
Competing Interests: Competing interests: None declared.
- Published
- 2024
- Full Text
- View/download PDF
18. A Spinal Tap Does Not Require Skin Markings.
- Author
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Ware PJ, Issa EC, Bitange P, Cooper GJ, Galea V, Bengiamin DI, and Young TP
- Subjects
- Humans, Emergency Service, Hospital organization & administration, Spinal Puncture methods
- Abstract
Competing Interests: Declaration of competing interest None.
- Published
- 2024
- Full Text
- View/download PDF
19. The "Syringe Hickey": An Alternative Skin Marking Method for Lumbar Puncture.
- Author
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Issa EC, Ware PJ, Bitange P, Cooper GJ, Galea T, Bengiamin DI, and Young TP
- Subjects
- Humans, Syringes, Chlorhexidine, Povidone-Iodine, Spinal Puncture methods, Anti-Infective Agents, Local
- Abstract
Background: Lumbar puncture is a procedure that is commonly performed in emergency departments. Despite their absence from procedure kits, emergency physicians often use skin markers to delineate landmarks for a lumbar puncture. We prefer to create a temporary indentation in the skin using the suction of a syringe. This "syringe hickey" eliminates the need for a skin marker., Discussion: We created a photo demonstration comparing the syringe hickey to a skin marker for site marking. The syringe hickey was created using a 10-mL syringe aspirated to 5 mL on the forearm for 1 min. The syringe hickey lasted over 30 min on a range of skin tones across the Fitzpatrick Scale. The skin marker faded but the syringe hickey maintained its definition after application of ultrasound gel and sterilization with either chlorhexidine or betadine., Conclusions: The syringe hickey is a simple skin marking technique that is resistant to antiseptic agents and ultrasound gel. The syringe hickey may be useful for other procedures that require puncture site marking., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
20. Elastic-Stable Chest Repair: Costal Plate Fixation for Sternotomy Nonunion.
- Author
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Gooseman MR, Cooper GJ, and Edwards JG
- Subjects
- Aged, Humans, Male, Bone Plates, Bone Transplantation, Fracture Fixation, Internal, Fractures, Ununited surgery, Ribs surgery, Sternotomy adverse effects
- Abstract
Sterile sternotomy nonunion is a recognized complication after median sternotomy. It is defined as sternotomy that persists after 3 months without evidence of bony healing but with healing of the overlying soft tissues. It is a morbid condition associated with pain and sternal instability. We present two challenging cases of sterile sternotomy nonunion after cardiac operations that were treated successfully with novel methods adopted from the Elastic Stable Chest Repair for complex pectus deformity repair, using transverse costal to costal external cortical plates and bicortical screws, after debridement, autologous bone grafting and double loop wire sternal approximation., (Copyright © 2018 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
21. Adipose tissue and metabolic and inflammatory responses to stroke are altered in obese mice.
- Author
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Haley MJ, Mullard G, Hollywood KA, Cooper GJ, Dunn WB, and Lawrence CB
- Subjects
- Adipokines blood, Adipose Tissue physiopathology, Animals, Biomarkers blood, Chromatography, High Pressure Liquid, Disease Models, Animal, Fatty Acids, Nonesterified blood, Infarction, Middle Cerebral Artery complications, Infarction, Middle Cerebral Artery physiopathology, Lipolysis, Liver metabolism, Male, Mass Spectrometry, Metabolomics methods, Mice, Inbred C57BL, Mice, Obese, Multivariate Analysis, Obesity complications, Obesity physiopathology, Time Factors, Adipose Tissue metabolism, Cytokines blood, Energy Metabolism, Infarction, Middle Cerebral Artery blood, Inflammation Mediators blood, Obesity blood
- Abstract
Obesity is an independent risk factor for stroke, although several clinical studies have reported that obesity improves stroke outcome. Obesity is hypothesised to aid recovery by protecting against post-stroke catabolism. We therefore assessed whether obese mice had an altered metabolic and inflammatory response to stroke. Obese ob/ob mice underwent a 20-min middle cerebral artery occlusion and 24-h reperfusion. Lipid metabolism and expression of inflammatory cytokines were assessed in the plasma, liver and adipose tissue. The obese-specific metabolic response to stroke was assessed in plasma using non-targeted ultra-high performance liquid chromatography-mass spectrometry (UHPLC-MS) metabolomics coupled with univariate and multivariate analysis. Obesity had no effect on the extent of weight loss 24 h after stroke but affected the metabolic and inflammatory responses to stroke, predominantly affecting lipid metabolism. Specifically, obese mice had increases in plasma free fatty acids and expression of adipose lipolytic enzymes. Metabolomics identified several classes of metabolites affected by stroke in obese mice, including fatty acids and membrane lipids (glycerophospholipids, lysophospholipids and sphingolipids). Obesity also featured increases in inflammatory cytokines in the plasma and adipose tissue. Overall, these results demonstrate that obesity affected the acute metabolic and inflammatory response to stroke and suggest a potential role for adipose tissue in this effect. These findings could have implications for longer-term recovery and also further highlight the importance of considering comorbidities in preclinical stroke research, especially when identifying biomarkers for stroke. However, further work is required to assess whether these changes translate into long-term effects on recovery., Competing Interests: Competing interestsThe authors declare no competing or financial interests., (© 2017. Published by The Company of Biologists Ltd.)
- Published
- 2017
- Full Text
- View/download PDF
22. Complex formation equilibria of Cu 2+ and Zn 2+ with Irbesartan and Losartan.
- Author
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Lachowicz JI, Nurchi VM, Crisponi G, Jaraquemada-Pelaez MG, Caltagirone C, Peana M, Zoroddu MA, Szewczuk Z, and Cooper GJ
- Subjects
- Angiotensin II Type 1 Receptor Blockers chemistry, Angiotensin II Type 1 Receptor Blockers pharmacokinetics, Antihypertensive Agents chemistry, Antihypertensive Agents pharmacokinetics, Biphenyl Compounds pharmacokinetics, Coordination Complexes pharmacokinetics, Copper pharmacokinetics, Humans, Irbesartan, Losartan pharmacokinetics, Tetrazoles pharmacokinetics, Zinc pharmacokinetics, Biphenyl Compounds chemistry, Coordination Complexes chemistry, Copper chemistry, Losartan chemistry, Tetrazoles chemistry, Zinc chemistry
- Abstract
We conducted a thorough study of Cu
2+ complex formation equilibria with Irbesartan and Losartan, the two primary drugs for the cure of cardiovascular diseases, with the aim of recognising if these drugs could exert a chelating action towards Cu2+ . We used different complementary techniques to gain a clear picture of the involved protonation and complexation equilibria. The low solubility in water of the ligands and of the formed metal complexes prevented the use of water as solvent, so we had to perform the measurements in mixed methanol-water solvents. Further, we studied the related equilibria with Zn2+ for evaluating a potential interference of this essential metal ion, largely present in biological fluids. Our study provided a strong evaluation of the formed complexes and of the relative stability constants. The binding of both metal ions takes place through the tetrazole moiety except for the Zn2+ -Irbesartan system. In this last case, NMR measurements gave evidence of a tautomeric equilibrium involving the imidazole ring and the aliphatic chain. The estimated complexation model, and the related stability constants, allowed a speciation study in human plasma, based on a number of simplifying assumptions, which remarked that both drugs, Losartan and Irbesartan, could exert a chelating action, scavenging non-negligible amounts of Cu2+ from the organism., (Copyright © 2016 Elsevier B.V. All rights reserved.)- Published
- 2017
- Full Text
- View/download PDF
23. Quantitative data describing the impact of the flavonol rutin on in-vivo blood-glucose and fluid-intake profiles, and survival of human-amylin transgenic mice.
- Author
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Aitken JF, Loomes KM, Riba-Garcia I, Unwin RD, Prijic G, Phillips AS, Phillips AR, Wu D, Poppitt SD, Ding K, Barran PE, Dowsey AW, and Cooper GJ
- Abstract
Here we provide data describing the time-course of blood-glucose and fluid-intake profiles of diabetic hemizygous human-amylin (hA) transgenic mice orally treated with rutin, and matched control mice treated with water. We employed "parametric change-point regression analysis" for investigation of differences in time-course profiles between the control and rutin-treatment groups to extract, for each animal, baseline levels of blood glucose and fluid-intake, the change-point time at which blood glucose (diabetes-onset) and fluid-intake (polydipsia-onset) accelerated away from baseline, and the rate of this acceleration. The parametric change-point regression approach applied here allowed a much more accurate determination of the exact time of onset of diabetes than do the standard diagnostic criteria. These data are related to the article entitled "Rutin suppresses human-amylin/hIAPP misfolding and oligomer formation in-vitro , and ameliorates diabetes and its impacts in human-amylin/hIAPP transgenic mice" (J.F. Aitken, K.M. Loomes, I. Riba-Garcia, R.D. Unwin, G. Prijic, A.S. Phillips, A.R.J. Phillips, D. Wu, S.D. Poppitt, K. Ding, P.E. Barran, A.W. Dowsey, G.J.S. Cooper. 2016) [1].
- Published
- 2016
- Full Text
- View/download PDF
24. Integrity of the Human Faecal Microbiota following Long-Term Sample Storage.
- Author
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Kia E, Wagner Mackenzie B, Middleton D, Lau A, Waite DW, Lewis G, Chan YK, Silvestre M, Cooper GJ, Poppitt SD, and Taylor MW
- Subjects
- Biodiversity, DNA, Bacterial, Humans, Metagenome, Metagenomics, RNA, Ribosomal, 16S, Time Factors, Feces microbiology, Microbial Viability, Microbiota, Preservation, Biological
- Abstract
In studies of the human microbiome, faecal samples are frequently used as a non-invasive proxy for the study of the intestinal microbiota. To obtain reliable insights, the need for bacterial DNA of high quality and integrity following appropriate faecal sample collection and preservation steps is paramount. In a study of dietary mineral balance in the context of type 2 diabetes (T2D), faecal samples were collected from healthy and T2D individuals throughout a 13-day residential trial. These samples were freeze-dried, then stored mostly at -20°C from the trial date in 2000/2001 until the current research in 2014. Given the relative antiquity of these samples (~14 years), we sought to evaluate DNA quality and comparability to freshly collected human faecal samples. Following the extraction of bacterial DNA, gel electrophoresis indicated that our DNA extracts were more sheared than extracts made from freshly collected faecal samples, but still of sufficiently high molecular weight to support amplicon-based studies. Likewise, spectrophotometric assessment of extracts revealed that they were of high quality and quantity. A subset of bacterial 16S rRNA gene amplicons were sequenced using Illumina MiSeq and compared against publicly available sequence data representing a similar cohort analysed by the American Gut Project (AGP). Notably, our bacterial community profiles were highly consistent with those from the AGP data. Our results suggest that when faecal specimens are stored appropriately, the microbial profiles are preserved and robust to extended storage periods., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
- Full Text
- View/download PDF
25. Metabolite mapping reveals severe widespread perturbation of multiple metabolic processes in Huntington's disease human brain.
- Author
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Patassini S, Begley P, Xu J, Church SJ, Reid SJ, Kim EH, Curtis MA, Dragunow M, Waldvogel HJ, Snell RG, Unwin RD, Faull RL, and Cooper GJ
- Subjects
- Aged, Brain pathology, Case-Control Studies, Female, Gas Chromatography-Mass Spectrometry, Humans, Huntington Disease pathology, Male, Metabolic Networks and Pathways, Metabolome, Metabolomics, Middle Aged, Tissue Distribution, Brain metabolism, Huntington Disease metabolism
- Abstract
Huntington's disease (HD) is a genetically-mediated neurodegenerative disorder wherein the aetiological defect is a mutation in the Huntington's gene (HTT), which alters the structure of the huntingtin protein (Htt) through lengthening of its polyglutamine tract, thus initiating a cascade that ultimately leads to premature death. However, neurodegeneration typically manifests in HD only in middle age, and mechanisms linking the causative mutation to brain disease are poorly understood. Brain metabolism is severely perturbed in HD, and some studies have indicated a potential role for mutant Htt as a driver of these metabolic aberrations. Here, our objective was to determine the effects of HD on brain metabolism by measuring levels of polar metabolites in regions known to undergo varying degrees of damage. We performed gas-chromatography/mass spectrometry-based metabolomic analyses in a case-control study of eleven brain regions in short post-mortem-delay human tissue from nine well-characterized HD patients and nine matched controls. In each patient, we measured metabolite content in representative tissue-samples from eleven brain regions that display varying degrees of damage in HD, thus identifying the presence and abundance of 63 different metabolites from several molecular classes, including carbohydrates, amino acids, nucleosides, and neurotransmitters. Robust alterations in regional brain-metabolite abundances were observed in HD patients: these included changes in levels of small molecules that play important roles as intermediates in the tricarboxylic-acid and urea cycles, and amino-acid metabolism. Our findings point to widespread disruption of brain metabolism and indicate a complex phenotype beyond the gradient of neuropathologic damage observed in HD brain., (Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
26. Thalamic amplification of sensory input in experimental diabetes.
- Author
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Freeman OJ, Evans MH, Cooper GJ, Petersen RS, and Gardiner NJ
- Subjects
- Animals, Male, Neurons, Afferent physiology, Rats, Rats, Sprague-Dawley, Thalamic Nuclei cytology, Vibrissae innervation, Vibrissae physiology, Action Potentials, Diabetes Mellitus, Experimental physiopathology, Diabetic Neuropathies physiopathology, Thalamic Nuclei physiopathology
- Abstract
Diabetic neuropathy is a common, and often debilitating, secondary complication of diabetes mellitus. As pain, hypersensitivity and paraesthesias present in a distal-proximal distribution, symptoms are generally believed to originate from damaged afferents within the peripheral nervous system. Increasing evidence suggests altered processing within the central nervous system in diabetic neuropathy contributes towards somatosensory dysfunction, but whether the accurate coding and relay of peripherally encoded information through the central nervous system is altered in diabetes is not understood. Here, we applied the strengths of the rodent whisker-barrel system to study primary afferent-thalamic processing in diabetic neuropathy. We found that neurons in the thalamic ventral posteromedial nucleus from rats with experimental diabetic neuropathy showed increased firing to precisely graded, multidirectional whisker deflection compared to non-diabetic rats. This thalamic hyperactivity occurred without any overt primary afferent dysfunction, as recordings from the trigeminal ganglion showed these primary afferents to be unaffected by diabetes. These findings suggest that central amplification can substantially transform ascending sensory input in diabetes, even in the absence of a barrage of ectopic primary afferent activity., (© 2016 The Authors. European Journal of Neuroscience published by Federation of European Neuroscience Societies and John Wiley & Sons Ltd.)
- Published
- 2016
- Full Text
- View/download PDF
27. Misrepresentation of the National Women's Hospital in Auckland, New Zealand.
- Author
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Baird MA, Barlev N, Bryder L, Burls A, Carrell RW, Chalmers I, Cooper GJ, Dow DA, Hicks K, Keirse M, Mantell C, Nobbs P, Overton E, Overton H, Patten P, Sandercock J, Smith V, and Trubuhovich R
- Subjects
- Female, Humans, New Zealand, Hospitals
- Published
- 2016
- Full Text
- View/download PDF
28. Elevation of brain glucose and polyol-pathway intermediates with accompanying brain-copper deficiency in patients with Alzheimer's disease: metabolic basis for dementia.
- Author
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Xu J, Begley P, Church SJ, Patassini S, McHarg S, Kureishy N, Hollywood KA, Waldvogel HJ, Liu H, Zhang S, Lin W, Herholz K, Turner C, Synek BJ, Curtis MA, Rivers-Auty J, Lawrence CB, Kellett KA, Hooper NM, Vardy ER, Wu D, Unwin RD, Faull RL, Dowsey AW, and Cooper GJ
- Subjects
- Aged, Animals, Case-Control Studies, Copper blood, Female, Fructose chemistry, Glucose chemistry, Humans, Male, Mass Spectrometry, Metals chemistry, Mice, Mice, Inbred C57BL, Mice, Transgenic, Middle Aged, Probability, Rats, Rats, Wistar, Sorbitol chemistry, Tissue Distribution, Alzheimer Disease metabolism, Blood Glucose metabolism, Brain metabolism, Copper deficiency, Dementia metabolism, Polymers chemistry
- Abstract
Impairment of brain-glucose uptake and brain-copper regulation occurs in Alzheimer's disease (AD). Here we sought to further elucidate the processes that cause neurodegeneration in AD by measuring levels of metabolites and metals in brain regions that undergo different degrees of damage. We employed mass spectrometry (MS) to measure metabolites and metals in seven post-mortem brain regions of nine AD patients and nine controls, and plasma-glucose and plasma-copper levels in an ante-mortem case-control study. Glucose, sorbitol and fructose were markedly elevated in all AD brain regions, whereas copper was correspondingly deficient throughout (all P < 0.0001). In the ante-mortem case-control study, by contrast, plasma-glucose and plasma-copper levels did not differ between patients and controls. There were pervasive defects in regulation of glucose and copper in AD brain but no evidence for corresponding systemic abnormalities in plasma. Elevation of brain glucose and deficient brain copper potentially contribute to the pathogenesis of neurodegeneration in AD.
- Published
- 2016
- Full Text
- View/download PDF
29. Graded perturbations of metabolism in multiple regions of human brain in Alzheimer's disease: Snapshot of a pervasive metabolic disorder.
- Author
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Xu J, Begley P, Church SJ, Patassini S, Hollywood KA, Jüllig M, Curtis MA, Waldvogel HJ, Faull RL, Unwin RD, and Cooper GJ
- Subjects
- Aged, Alzheimer Disease pathology, Amino Acids analysis, Amino Acids metabolism, Brain pathology, Female, Humans, Male, Metabolomics, Alzheimer Disease metabolism, Brain metabolism, Metabolic Networks and Pathways, Metabolome
- Abstract
Alzheimer's disease (AD) is an age-related neurodegenerative disorder that displays pathological characteristics including senile plaques and neurofibrillary tangles. Metabolic defects are also present in AD-brain: for example, signs of deficient cerebral glucose uptake may occur decades before onset of cognitive dysfunction and tissue damage. There have been few systematic studies of the metabolite content of AD human brain, possibly due to scarcity of high-quality brain tissue and/or lack of reliable experimental methodologies. Here we sought to: 1) elucidate the molecular basis of metabolic defects in human AD-brain; and 2) identify endogenous metabolites that might guide new approaches for therapeutic intervention, diagnosis or monitoring of AD. Brains were obtained from nine cases with confirmed clinical/neuropathological AD and nine controls matched for age, sex and post-mortem delay. Metabolite levels were measured in post-mortem tissue from seven regions: three that undergo severe neuronal damage (hippocampus, entorhinal cortex and middle-temporal gyrus); three less severely affected (cingulate gyrus, sensory cortex and motor cortex); and one (cerebellum) that is relatively spared. We report a total of 55 metabolites that were altered in at least one AD-brain region, with different regions showing alterations in between 16 and 33 metabolites. Overall, we detected prominent global alterations in metabolites from several pathways involved in glucose clearance/utilization, the urea cycle, and amino-acid metabolism. The finding that potentially toxigenic molecular perturbations are widespread throughout all brain regions including the cerebellum is consistent with a global brain disease process rather than a localized effect of AD on regional brain metabolism., (Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2016
- Full Text
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30. An all-inorganic polyoxometalate-polyoxocation chemical garden.
- Author
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Points LJ, Cooper GJ, Dolbecq A, Mialane P, and Cronin L
- Subjects
- Cations, Tungsten Compounds chemistry
- Abstract
Herein, we show it is possible to produce wholly inorganic chemical gardens from a cationic polyoxometalate (POM) seed in an anionic POM solution, demonstrating a wholly POM-based chemical garden system that produces architectures over a wide concentration range. Six concentration dependent growth regimes have been discovered and characterized: clouds, membranes, slugs, tubes, jetting and budding.
- Published
- 2016
- Full Text
- View/download PDF
31. Metabolic Dysfunction Is Restricted to the Sciatic Nerve in Experimental Diabetic Neuropathy.
- Author
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Freeman OJ, Unwin RD, Dowsey AW, Begley P, Ali S, Hollywood KA, Rustogi N, Petersen RS, Dunn WB, Cooper GJ, and Gardiner NJ
- Subjects
- Animals, Carnitine analogs & derivatives, Carnitine metabolism, Diabetes Mellitus, Experimental complications, Diabetic Neuropathies etiology, Disease Models, Animal, Energy Metabolism, Fructose metabolism, Homeostasis, Inositol metabolism, Lipid Metabolism, Lumbar Vertebrae, Metabolomics, Neural Conduction, Oxidative Phosphorylation, Oxidative Stress, Polymers metabolism, Rats, Rats, Sprague-Dawley, Sorbitol metabolism, Diabetes Mellitus, Experimental metabolism, Diabetic Neuropathies metabolism, Ganglia, Spinal metabolism, Glucose metabolism, Mitochondria metabolism, Sciatic Nerve metabolism, Trigeminal Ganglion metabolism
- Abstract
High glucose levels in the peripheral nervous system (PNS) have been implicated in the pathogenesis of diabetic neuropathy (DN). However, our understanding of the molecular mechanisms that cause the marked distal pathology is incomplete. We performed a comprehensive, system-wide analysis of the PNS of a rodent model of DN. We integrated proteomics and metabolomics from the sciatic nerve (SN), the lumbar 4/5 dorsal root ganglia (DRG), and the trigeminal ganglia (TG) of streptozotocin-diabetic and healthy control rats. Even though all tissues showed a dramatic increase in glucose and polyol pathway intermediates in diabetes, a striking upregulation of mitochondrial oxidative phosphorylation and perturbation of lipid metabolism was found in the distal SN that was not present in the corresponding cell bodies of the DRG or the cranial TG. This finding suggests that the most severe molecular consequences of diabetes in the nervous system present in the SN, the region most affected by neuropathy. Such spatial metabolic dysfunction suggests a failure of energy homeostasis and/or oxidative stress, specifically in the distal axon/Schwann cell-rich SN. These data provide a detailed molecular description of the distinct compartmental effects of diabetes on the PNS that could underlie the distal-proximal distribution of pathology., (© 2016 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered.)
- Published
- 2016
- Full Text
- View/download PDF
32. Identification of elevated urea as a severe, ubiquitous metabolic defect in the brain of patients with Huntington's disease.
- Author
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Patassini S, Begley P, Reid SJ, Xu J, Church SJ, Curtis M, Dragunow M, Waldvogel HJ, Unwin RD, Snell RG, Faull RL, and Cooper GJ
- Subjects
- Aged, Brain metabolism, Case-Control Studies, Female, Gas Chromatography-Mass Spectrometry, Humans, Male, Middle Aged, Urea analysis, Brain pathology, Huntington Disease metabolism, Huntington Disease pathology, Urea metabolism
- Abstract
Huntington's disease (HD) is a neurodegenerative disorder wherein the aetiological defect is a mutation in the Huntington's gene (HTT), which alters the structure of the huntingtin protein through the lengthening of a polyglutamine tract and initiates a cascade that ultimately leads to dementia and premature death. However, neurodegeneration typically manifests in HD only in middle age, and processes linking the causative mutation to brain disease are poorly understood. Here, our objective was to elucidate further the processes that cause neurodegeneration in HD, by measuring levels of metabolites in brain regions known to undergo varying degrees of damage. We applied gas-chromatography/mass spectrometry-based metabolomics in a case-control study of eleven brain regions in short post-mortem-delay human tissue from nine well-characterized HD patients and nine controls. Unexpectedly, a single major abnormality was evident in all eleven brain regions studied across the forebrain, midbrain and hindbrain, namely marked elevation of urea, a metabolite formed in the urea cycle by arginase-mediated cleavage of arginine. Urea cycle activity localizes primarily in the liver, where it functions to incorporate protein-derived amine-nitrogen into urea for recycling or urinary excretion. It also occurs in other cell-types, but systemic over-production of urea is not known in HD. These findings are consistent with impaired local urea regulation in brain, by up-regulation of synthesis and/or defective clearance. We hypothesize that defective brain urea metabolism could play a substantive role in the pathogenesis of neurodegeneration, perhaps via defects in osmoregulation or nitrogen metabolism. Brain urea metabolism is therefore a target for generating novel monitoring/imaging strategies and/or therapeutic interventions aimed at ameliorating the impact of HD in patients., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
33. CrossTalk proposal: Physiological CO2 exchange can depend on membrane channels.
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Cooper GJ, Occhipinti R, and Boron WF
- Subjects
- Animals, Humans, Aquaporins metabolism, Carbon Dioxide metabolism, Cell Membrane metabolism
- Published
- 2015
- Full Text
- View/download PDF
34. Rebuttal from Gordon J. Cooper, Rossana Occhipinti and Walter F. Boron.
- Author
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Cooper GJ, Occhipinti R, and Boron WF
- Subjects
- Boron, Boron Compounds
- Published
- 2015
- Full Text
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35. Glicentin-related pancreatic polypeptide inhibits glucose-stimulated insulin secretion from the isolated pancreas of adult male rats.
- Author
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Whiting L, Stewart KW, Hay DL, Harris PW, Choong YS, Phillips AR, Brimble MA, and Cooper GJ
- Abstract
Peptides derived from the glucagon gene Gcg, for example, glucagon and glucagon-like peptide 1 (GLP-1), act as physiological regulators of fuel metabolism and are thus of major interest in the pathogenesis of diseases, such as type-2 diabetes and obesity, and their therapeutic management. Glicentin-related pancreatic polypeptide (GRPP) is a further, 30 amino acid Gcg-derived peptide identified in human, mouse, rat, and pig. However, the potential glucoregulatory function of this peptide is largely unknown. Here, we synthesized rat GRPP (rGRPP) and a closely related peptide, rat GRPP-like peptide (rGRPP-LP), and investigated their actions in the liver and pancreas of adult male rats by employing isolated-perfused organ preparations. Rat GRPP and rGRPP-LP did not affect glucose output from the liver, but both elicited potent inhibition of glucose-stimulated insulin secretion (GSIS) from the rat pancreas. This action is unlikely to be mediated by glucagon or GLP-1 receptors, as rGRPP and rGRPP-LP did not stimulate cyclic adenosine monophosphate (cAMP) production from the glucagon or GLP-1 receptors, nor did they antagonize glucagon- or GLP-1-stimulated cAMP-production at either receptor. GRPP and GRPP-LP may be novel regulators of insulin secretion, acting through an as-yet undefined receptor., (© 2015 The Authors. Physiological Reports published by Wiley Periodicals, Inc. on behalf of the American Physiological Society and The Physiological Society.)
- Published
- 2015
- Full Text
- View/download PDF
36. Low-dose copper infusion into the coronary circulation induces acute heart failure in diabetic rats: New mechanism of heart disease.
- Author
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Cheung CC, Soon CY, Chuang CL, Phillips AR, Zhang S, and Cooper GJ
- Subjects
- Animals, Cardiac Output drug effects, Chelating Agents pharmacology, Copper administration & dosage, Coronary Vessels drug effects, Coronary Vessels physiopathology, Diabetes Mellitus, Experimental complications, Diabetic Cardiomyopathies blood, Diabetic Cardiomyopathies physiopathology, Diabetic Cardiomyopathies prevention & control, Heart drug effects, Heart Failure blood, Heart Failure complications, Heart Failure physiopathology, In Vitro Techniques, Infusions, Intra-Arterial, Male, Perfusion, Rats, Wistar, Stroke Volume drug effects, Vascular Resistance drug effects, Vasoconstriction drug effects, Ventricular Dysfunction, Left blood, Ventricular Dysfunction, Left complications, Ventricular Dysfunction, Left etiology, Ventricular Dysfunction, Left physiopathology, Copper blood, Coronary Circulation drug effects, Diabetic Cardiomyopathies etiology, Heart physiopathology, Heart Failure etiology, Models, Biological, Up-Regulation drug effects
- Abstract
Diabetes impairs copper (Cu) regulation, causing elevated serum Cu and urinary Cu excretion in patients with established cardiovascular disease; it also causes cardiomyopathy and chronic cardiac impairment linked to defective Cu homeostasis in rats. However, the mechanisms that link impaired Cu regulation to cardiac dysfunction in diabetes are incompletely understood. Chronic treatment with triethylenetetramine (TETA), a Cu²⁺-selective chelator, improves cardiac function in diabetic patients, and in rats with heart disease; the latter displayed ∼3-fold elevations in free Cu²⁺ in the coronary effluent when TETA was infused into their coronary arteries. To further study the nature of defective cardiac Cu regulation in diabetes, we employed an isolated-perfused, working-heart model in which we infused micromolar doses of Cu²⁺ into the coronary arteries and measured acute effects on cardiac function in diabetic and non-diabetic-control rats. Infusion of CuCl₂ solutions caused acute dose-dependent cardiac dysfunction in normal hearts. Several measures of baseline cardiac function were impaired in diabetic hearts, and these defects were exacerbated by low-micromolar Cu²⁺ infusion. The response to infused Cu²⁺ was augmented in diabetic hearts, which became defective at lower infusion levels and underwent complete pump failure (cardiac output = 0 ml/min) more often (P < 0.0001) at concentrations that only moderately impaired function of control hearts. To our knowledge, this is the first report describing the acute effects on cardiac function of pathophysiological elevations in coronary Cu²⁺. The effects of Cu²⁺ infusion occur within minutes in both control and diabetic hearts, which suggests that they are not due to remodelling. Heightened sensitivity to the acute effects of small elevations in Cu²⁺ could contribute substantively to impaired cardiac function in patients with diabetes and is thus identified as a new mechanism of heart disease., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
37. Modelling atherosclerosis by proteomics: Molecular changes in the ascending aortas of cholesterol-fed rabbits.
- Author
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Xu J, Jüllig M, Middleditch MJ, and Cooper GJ
- Subjects
- Animals, Aorta pathology, Aortic Diseases etiology, Aortic Diseases pathology, Atherosclerosis etiology, Atherosclerosis pathology, Biomarkers metabolism, Chromatography, High Pressure Liquid, Disease Models, Animal, Male, Membrane Glycoproteins metabolism, Rabbits, Solid Phase Extraction, Tandem Mass Spectrometry, Aorta metabolism, Aortic Diseases metabolism, Atherosclerosis metabolism, Cholesterol, Dietary, Proteins metabolism, Proteomics methods
- Abstract
The cholesterol-fed rabbit is commonly used as a model to study the vascular effects of hypercholesterolemia and resulting atherosclerotic lesions. Here we undertook a proteomic case-control investigation of ascending aortas from male New Zealand White rabbits after 10 weeks on a high-cholesterol (2% w/w) diet (HCD, n = 5) or control diet (n = 5), in order to determine the changes in response to the HCD. Histology confirmed intimal thickening in the HCD group consistent with atherosclerosis, and LC-MS/MS analysis of individually-obtained ascending aortic extracts labelled with isobaric (iTRAQ) tags enabled the identification and quantitation of 453 unique proteins above the 1% false discovery rate threshold. Of 67 proteins showing significant differences in relative abundance (p < 0.05), 62 were elevated and five decreased in ascending aortas from HCD-fed rabbits compared to controls. Six proteins were selected for validation using Multiple Reaction Monitoring, which confirmed the iTRAQ results. Many of the observed protein changes are consistent with known molecular perturbations in the ascending aorta that occur in response to hypercholesterolemia, e.g. elevation of tissue levels of apolipoproteins, extracellular matrix adhesion proteins, glycolytic enzymes, heat shock proteins and proteins involved in immune defense. We also made a number of novel observations, including a 15-fold elevation of glycoprotein (trans-membrane) nmb-like (Gpnmb) in response to HCD. Gpnmb has previously been linked to angiogenesis but not to atherosclerosis. This and additional novel observations merit further investigation as these perturbations may play important and as yet undiscovered roles in the pathogenesis of atherosclerosis in rabbits as well as humans., (Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
38. From Chemical Gardens to Chemobrionics.
- Author
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Barge LM, Cardoso SS, Cartwright JH, Cooper GJ, Cronin L, De Wit A, Doloboff IJ, Escribano B, Goldstein RE, Haudin F, Jones DE, Mackay AL, Maselko J, Pagano JJ, Pantaleone J, Russell MJ, Sainz-Díaz CI, Steinbock O, Stone DA, Tanimoto Y, and Thomas NL
- Published
- 2015
- Full Text
- View/download PDF
39. Diabetes-induced alterations in tissue collagen and carboxymethyllysine in rat kidneys: Association with increased collagen-degrading proteinases and amelioration by Cu(II)-selective chelation.
- Author
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Brings S, Zhang S, Choong YS, Hogl S, Middleditch M, Kamalov M, Brimble MA, Gong D, and Cooper GJ
- Subjects
- Animals, Chelating Agents pharmacology, Diabetes Mellitus, Experimental pathology, Kidney drug effects, Kidney pathology, Lysine metabolism, Male, Protein Processing, Post-Translational drug effects, Rats, Rats, Wistar, Streptozocin, Trientine pharmacology, Chelating Agents metabolism, Collagen metabolism, Copper metabolism, Diabetes Mellitus, Experimental metabolism, Kidney metabolism, Lysine analogs & derivatives, Peptide Hydrolases metabolism
- Abstract
Advanced glycation end-products (AGEs) comprise a group of non-enzymatic post-translational modifications of proteins and are elevated in diabetic tissues. AGE-modification impairs the digestibility of collagen in vitro but little is known about its relation to collagen-degrading proteinases in vivo. N(ε)-carboxymethyllysine (CML) is a stable AGE that forms on lysyl side-chains in the presence of glucose, probably via a transition metal-catalysed mechanism. Here, rats with streptozotocin-induced diabetes and non-diabetic controls were treated for 8weeks with placebo or the Cu(II)-selective chelator, triethylenetetramine (TETA), commencing 8weeks after disease induction. Actions of diabetes and drug treatment were measured on collagen and collagen-degrading proteinases in kidney tissue. The digestibility and CML content of collagen, and corresponding levels of mRNAs and collagen, were related to changes in collagen-degrading-proteinases. Collagen-degrading proteinases, cathepsin L (CTSL) and matrix metalloproteinase-2 (MMP-2) were increased in diabetic rats. CTSL-levels correlated strongly and positively with increased collagen-CML levels and inversely with decreased collagen digestibility in diabetes. The collagen-rich mesangium displayed a strong increase of CTSL in diabetes. TETA treatment normalised kidney collagen content and partially normalised levels of CML and CTSL. These data provide evidence for an adaptive proteinase response in diabetic kidneys, affected by excessive collagen-CML formation and decreased collagen digestibility. The normalisation of collagen and partial normalisation of CML- and CTSL-levels by TETA treatment supports the involvement of Cu(II) in CML formation and altered collagen metabolism in diabetic kidneys. Cu(II)-chelation by TETA may represent a treatment option to rectify collagen metabolism in diabetes independent of alterations in blood glucose levels., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
40. Deficient copper concentrations in dried-defatted hepatic tissue from ob/ob mice: A potential model for study of defective copper regulation in metabolic liver disease.
- Author
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Church SJ, Begley P, Kureishy N, McHarg S, Bishop PN, Bechtold DA, Unwin RD, and Cooper GJ
- Subjects
- Animals, Male, Mass Spectrometry, Mice, Mice, Inbred C57BL, Copper metabolism, Fats isolation & purification, Liver metabolism, Liver Diseases metabolism
- Abstract
Ob/ob mice provide an animal model for non-alcoholic fatty liver disease/non-alcoholic steatohepatitis (NAFLD/NASH) in patients with obesity and type-2 diabetes. Low liver copper has been linked to hepatic lipid build-up (steatosis) in animals with systemic copper deficiency caused by low-copper diets. However, hepatic copper status in patients with NAFLD or NASH is uncertain, and a validated animal model useful for the study of hepatic copper regulation in common forms of metabolic liver disease is lacking. Here, we report parallel measurements of essential metal levels in whole-liver tissue and defatted-dried liver tissue from ob/ob and non-obese control mice. Measurements in whole-liver tissue from ob/ob mice at an age when they have developed NAFLD/NASH, provide compelling evidence for factitious lowering of copper and all other essential metals by steatosis, and so cannot be used to study hepatic metal regulation in this model. By marked contrast, metal measurements in defatted-dried liver samples reveal that most essential metals were actually normal and indicate specific lowering of copper in ob/ob mice, consistent with hepatic copper deficiency. Thus ob/ob mice can provide a model useful for the study of copper regulation in NAFLD and NASH, provided levels are measured in defatted-dried liver tissue., (Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
41. Conversion of non-adipogenic fibroblasts into adipocytes by a defined hormone mixture.
- Author
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Nie T, Hui X, Gao X, Nie B, Mao L, Tang X, Yuan R, Li K, Li P, Xu A, Liu P, Ding S, Han W, Cooper GJ, and Wu D
- Subjects
- 3T3-L1 Cells, Adipocytes metabolism, Adipogenesis drug effects, Animals, Dexamethasone administration & dosage, Epidermal Growth Factor administration & dosage, Fibroblasts metabolism, Gene Knockdown Techniques, Hepatocyte Growth Factor administration & dosage, Insulin administration & dosage, Mice, Mice, Inbred NOD, Mice, SCID, NIH 3T3 Cells, Obesity metabolism, Obesity pathology, STAT5 Transcription Factor antagonists & inhibitors, STAT5 Transcription Factor genetics, STAT5 Transcription Factor metabolism, Signal Transduction drug effects, Adipocytes cytology, Adipocytes drug effects, Cell Transdifferentiation drug effects, Fibroblasts cytology, Fibroblasts drug effects
- Abstract
Obesity is accompanied by an increase in the size and the number of adipocytes. As adipocytes are thought to differentiate from pre-adipocytes, we postulate that non-adipogenic fibroblasts contribute to adipocyte formation under certain conditions such as obesity. We report for the first time that NIH-3T3 fibroblasts, which are generally considered to be non-adipogenic, can be converted into mature adipocytes by treatment with a defined hormone mixture comprising EGF (epidermal growth factor), HGF (hepatocyte growth factor), Dex (dexamethasone) and insulin. Furthermore, NIH-3T3 cells transplanted into obese immunodeficient NOD/SCID (non-obese diabetic/severe combined immunodeficient) mice formed adipocytes in vivo. Interestingly, the mixture elicited conversion of NIH-3T3 cells directly into adipocytes without a preceding pre-adipocyte stage. Functional analysis revealed that each component of the mixture was necessary for the induction of adipogenesis, including Dex which inhibited the cell proliferation stimulated by EGF. Upon profiling the signalling pathways employed by EGF and HGF, we found STAT5 (signal transducer and activator of transcription 5) signalling to be activated, predominantly at the levels of both transcription and post-translational modification. Inhibition of the STAT5 pathway, either by genetic knockdown or a specific pharmacological agent, blocked adipogenesis in NIH-3T3 cells. Taken together, these data not only establish a newly recognized grouping of factors that can induce trans-differentiation of non-adipogenic fibroblasts into adipocytes, but also give us a greater understanding of obesity.
- Published
- 2015
- Full Text
- View/download PDF
42. Development of a 3D printer using scanning projection stereolithography.
- Author
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Lee MP, Cooper GJ, Hinkley T, Gibson GM, Padgett MJ, and Cronin L
- Abstract
We have developed a system for the rapid fabrication of low cost 3D devices and systems in the laboratory with micro-scale features yet cm-scale objects. Our system is inspired by maskless lithography, where a digital micromirror device (DMD) is used to project patterns with resolution up to 10 µm onto a layer of photoresist. Large area objects can be fabricated by stitching projected images over a 5 cm(2) area. The addition of a z-stage allows multiple layers to be stacked to create 3D objects, removing the need for any developing or etching steps but at the same time leading to true 3D devices which are robust, configurable and scalable. We demonstrate the applications of the system by printing a range of micro-scale objects as well as a fully functioning microfluidic droplet device and test its integrity by pumping dye through the channels.
- Published
- 2015
- Full Text
- View/download PDF
43. Replacement of the CysA7-CysB7 disulfide bond with a 1,2,3-triazole linker causes unfolding in insulin glargine.
- Author
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Williams GM, Lee K, Li X, Cooper GJ, and Brimble MA
- Subjects
- Amino Acid Sequence, Animals, Blood Glucose metabolism, Insulin Glargine chemical synthesis, Insulin Glargine pharmacology, Mice, Models, Molecular, Molecular Sequence Data, Protein Structure, Secondary, Cysteine chemistry, Disulfides chemistry, Insulin Glargine chemistry, Protein Unfolding, Triazoles chemistry
- Abstract
Two analogues of insulin glargine containing a 1,4-disubstituted 1,2,3-triazole group in place of the CysA7-CysB7 disulfide bond were prepared using CuAAC click chemistry to efficiently join the peptide chains. The resulting insulin analogues were analysed by circular dichroism spectroscopy to assess whether this modification compromised the folding pattern of the native form. Investigations, including an in vivo murine study, revealed that these analogues were not biologically active and that the structures were significantly unfolded, an outcome which suggests that maintaining a precise inter-chain distance is critical to the structure of the insulin hormone.
- Published
- 2015
- Full Text
- View/download PDF
44. Abnormalities of selenium but not of copper homeostasis may drive tissue fibrosis in patients with systemic sclerosis.
- Author
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Hughes M, Cooper GJ, Wilkinson J, New P, Guy JM, and Herrick AL
- Subjects
- Adult, Aged, Case-Control Studies, Female, Homeostasis, Humans, Male, Middle Aged, Serum Albumin, Copper metabolism, Fibrosis metabolism, Scleroderma, Systemic metabolism, Selenium metabolism
- Published
- 2015
- Full Text
- View/download PDF
45. Physicochemical studies on the copper(II) binding by glycated collagen telopeptides.
- Author
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Kamalov M, Harris PW, Hartinger CG, Miskelly GM, Cooper GJ, and Brimble MA
- Subjects
- Amino Acids chemistry, Ceruloplasmin chemistry, Chelating Agents chemistry, Collagen blood, Electrochemistry, Humans, Hydrogen-Ion Concentration, Ions, Metals chemistry, Protein Binding, Spectrometry, Mass, Electrospray Ionization, Telomere metabolism, Collagen chemistry, Copper chemistry, Glycation End Products, Advanced chemistry, Peptides chemistry
- Abstract
Emerging evidence indicates that levels of advanced glycation end-products (AGEs) correlate with age- and diabetes-related organ damage and may play a causative role in such damage. Increased chelation of Cu(II) ions appears to play an important role in this process, however, the precise relationship between formation of AGEs and accumulation of Cu(II) is yet to be determined. The interaction between AGEs and Cu(II) has been investigated using a collagenous peptide that has been site-specifically modified by a key AGE. Potentiometric titration showed that introduction of this AGE increased the capacity of the host-peptide to bind Cu(II). This result was confirmed by mass spectrometric characterisation of the AGE-modified peptide-Cu(II) system.
- Published
- 2015
- Full Text
- View/download PDF
46. Using mass spectrometry to detect, differentiate, and semiquantitate closely related peptide hormones in complex milieu: measurement of IGF-II and vesiculin.
- Author
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Lee KL, Middleditch MJ, Williams GM, Brimble MA, and Cooper GJ
- Subjects
- Animals, Cell Line, Humans, Insulin-Secreting Cells metabolism, Mice, Recombinant Proteins, Insulin-Like Growth Factor II chemistry, Mass Spectrometry methods, Nerve Tissue Proteins chemistry
- Abstract
The search for an islet β-cell growth factor has been a key objective in recent diabetes research, because the ability to regenerate and/or protect the functioning β-cell population in patients could result in a great advancement for diabetes treatment. IGF-I and IGF-II are known to play crucial roles in fetal growth and prenatal development, and there is growing evidence that IGF-II increases β-cell proliferation and survival in vitro and in vivo. A search for the source of IGF-II-like immunoreactivity in isolated β-cell secretory granules from the murine cell line βTC6-F7 revealed a novel 2-chain IGF-II-derived peptide, which we named vesiculin and which has been shown to be a full insulin agonist. Here, we present a liquid chromatography-tandem mass spectrometry method that enables selective detection and semiquantitation of the highly related IGF-II and vesiculin molecules. We have used this method to measure these 2 peptides in conditioned media from 2 β-cell lines, produced under increasing glucose concentrations. This technique detected both IGF-II and vesiculin in media conditioned by MIN6 and βTC6-F7 cells at levels in the range of 0 to 6 μM (total insulin, 80-450 μM) and revealed a glucose-stimulated increase in insulin, IGF-II, and vesiculin. IGF-II was detected in adult human and neonatal mouse serum in high levels, but vesiculin was not present. The methodology we present herein has utility for detecting and differentiating active peptides that are highly related and of low abundance.
- Published
- 2015
- Full Text
- View/download PDF
47. Essential roles of insulin, AMPK signaling and lysyl and prolyl hydroxylases in the biosynthesis and multimerization of adiponectin.
- Author
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Zhang L, Li MM, Corcoran M, Zhang S, and Cooper GJ
- Subjects
- 3T3-L1 Cells, AMP-Activated Protein Kinases genetics, Adiponectin genetics, Animals, Antihypertensive Agents pharmacology, Hydroxybenzoates pharmacology, Mice, Mice, Obese, Minoxidil pharmacology, Procollagen-Lysine, 2-Oxoglutarate 5-Dioxygenase antagonists & inhibitors, Procollagen-Lysine, 2-Oxoglutarate 5-Dioxygenase genetics, Prolyl Hydroxylases genetics, Protein Isoforms biosynthesis, Protein Isoforms genetics, Protein Multimerization drug effects, Signal Transduction genetics, AMP-Activated Protein Kinases metabolism, Adipocytes metabolism, Adiponectin biosynthesis, Hypoglycemic Agents pharmacology, Insulin pharmacology, Procollagen-Lysine, 2-Oxoglutarate 5-Dioxygenase metabolism, Prolyl Hydroxylases metabolism, Signal Transduction drug effects
- Abstract
Post-translational modifications (PTMs) of the adiponectin molecule are essential for its full bioactivity, and defects in PTMs leading to its defective production and multimerization have been linked to the mechanisms of insulin resistance, obesity, and type-2 diabetes. Here we observed that, in differentiated 3T3-L1 adipocytes, decreased insulin signaling caused by blocking of insulin receptors (InsR) with an anti-InsR blocking antibody, increased rates of adiponectin secretion, whereas concomitant elevations in insulin levels counteracted this effect. Adenosine monophosphate-activated protein kinase (AMPK) signaling regulated adiponectin production by modulating the expression of adiponectin receptors, the secretion of adiponectin, and eventually the expression of adiponectin itself. We found that lysyl hydroxylases (LHs) and prolyl hydroxylases (PHs) were expressed in white-adipose tissue of ob/ob mice, wherein LH3 levels were increased compared with controls. In differentiated 3T3-L1 adipocytes, both non-specific inhibition of LHs and PHs by dipyridyl, and specific inhibition of LHs by minoxidil and of P4H with ethyl-3,4-dihydroxybenzoate, caused significant suppression of adiponectin production, more particularly of the higher-order isoforms. Transient gene knock-down of LH3 (Plod3) caused a suppressive effect, especially on the high molecular-weight (HMW) isoforms. These data indicate that PHs and LHs are both required for physiological adiponectin production and in particular are essential for the formation/secretion of the HMW isoforms., (Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
48. Adiponectin induces A20 expression in adipose tissue to confer metabolic benefit.
- Author
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Hand LE, Usan P, Cooper GJ, Xu LY, Ammori B, Cunningham PS, Aghamohammadzadeh R, Soran H, Greenstein A, Loudon AS, Bechtold DA, and Ray DW
- Subjects
- Adiponectin genetics, Adiponectin immunology, Adipose Tissue, White cytology, Adipose Tissue, White immunology, Adipose Tissue, White metabolism, Animals, Cells, Cultured, Cysteine Endopeptidases genetics, Cysteine Endopeptidases immunology, DNA-Binding Proteins immunology, Diet, High-Fat, Energy Metabolism physiology, Female, Gene Expression immunology, Glycogen Synthase Kinase 3 metabolism, Glycogen Synthase Kinase 3 beta, Humans, Insulin Resistance physiology, Intracellular Signaling Peptides and Proteins genetics, Intracellular Signaling Peptides and Proteins immunology, Macrophages immunology, Macrophages metabolism, Male, Mice, Knockout, Nuclear Proteins immunology, Obesity immunology, Panniculitis immunology, RNA, Small Interfering genetics, Tumor Necrosis Factor alpha-Induced Protein 3, Adiponectin metabolism, Cysteine Endopeptidases metabolism, DNA-Binding Proteins metabolism, Intracellular Signaling Peptides and Proteins metabolism, Nuclear Proteins metabolism, Obesity metabolism, Panniculitis metabolism
- Abstract
Obesity is a major risk factor for metabolic disease, with white adipose tissue (WAT) inflammation emerging as a key underlying pathology. We detail that mice lacking Reverbα exhibit enhanced fat storage without the predicted increased WAT inflammation or loss of insulin sensitivity. In contrast to most animal models of obesity and obese human patients, Reverbα(-/-) mice exhibit elevated serum adiponectin levels and increased adiponectin secretion from WAT explants in vitro, highlighting a potential anti-inflammatory role of this adipokine in hypertrophic WAT. Indeed, adiponectin was found to suppress primary macrophage responses to lipopolysaccharide and proinflammatory fatty acids, and this suppression depended on glycogen synthase kinase 3β activation and induction of A20. Attenuated inflammatory responses in Reverbα(-/-) WAT depots were associated with tonic elevation of A20 protein and ex vivo shown to depend on A20. We also demonstrate that adipose A20 expression in obese human subjects exhibits a negative correlation with measures of insulin sensitivity. Furthermore, bariatric surgery-induced weight loss was accompanied by enhanced WAT A20 expression, which is positively correlated with increased serum adiponectin and improved metabolic and inflammatory markers, including C-reactive protein. The findings identify A20 as a mediator of adiponectin anti-inflammatory action in WAT and a potential target for mitigating obesity-related pathology., (© 2015 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered.)
- Published
- 2015
- Full Text
- View/download PDF
49. The pathogenic mechanism of diabetes varies with the degree of overexpression and oligomerization of human amylin in the pancreatic islet β cells.
- Author
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Zhang S, Liu H, Chuang CL, Li X, Au M, Zhang L, Phillips AR, Scott DW, and Cooper GJ
- Subjects
- Animals, Base Sequence, Biopolymers chemistry, Cell Death, DNA Primers, Diabetes Mellitus, Type 2 pathology, Glucose Tolerance Test, Insulin blood, Islet Amyloid Polypeptide chemistry, Islets of Langerhans cytology, Mice, Mice, Transgenic, Reverse Transcriptase Polymerase Chain Reaction, Biopolymers metabolism, Diabetes Mellitus, Type 2 metabolism, Islet Amyloid Polypeptide metabolism, Islets of Langerhans metabolism
- Abstract
The aggregation of human amylin (hA) to form cytotoxic structures has been closely associated with the causation of type 2 diabetes. We sought to advance understanding of how altered expression and aggregation of hA might link β-cell degeneration with diabetes onset and progression, by comparing phenotypes between homozygous and hemizygous hA-transgenic mice. The homozygous mice displayed elevated islet hA that correlated positively with measures of oligomer formation (r=0.91; P<0.0001). They also developed hyperinsulinemia with transient insulin resistance during the prediabetes stage and then underwent rapid β-cell loss, culminating in severe juvenile-onset diabetes. The prediabetes stage was prolonged in the hemizygous mice, wherein β-cell dysfunction and extensive oligomer formation occurred in adulthood at a much later stage, when hA levels were lower (r=-0.60; P<0.0001). This is the first report to show that hA-evoked diabetes is associated with age, insulin resistance, progressive islet dysfunction, and β-cell apoptosis, which interact variably to cause the different diabetes syndromes. The various levels of hA elevation cause different extents of oligomer formation in the disease stages, thus eliciting early- or adult-onset diabetes syndromes, reminiscent of type 1 and 2 diabetes, respectively. Thus, the hA-evoked diabetes phenotypes differ substantively according to degree of amylin overproduction. These findings are relevant to the understanding of the pathogenesis and the development of experimental therapeutics for diabetes., (© FASEB.)
- Published
- 2014
- Full Text
- View/download PDF
50. Evidence that multiple defects in lipid regulation occur before hyperglycemia during the prodrome of type-2 diabetes.
- Author
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Anderson SG, Dunn WB, Banerjee M, Brown M, Broadhurst DI, Goodacre R, Cooper GJ, Kell DB, and Cruickshank JK
- Subjects
- Adiponectin blood, Adipose Tissue metabolism, Adipose Tissue pathology, Adult, Blood Glucose metabolism, Carnitine analogs & derivatives, Carnitine blood, Diabetes Mellitus, Type 2 pathology, Diabetes, Gestational pathology, Diglycerides blood, Fasting, Female, Follow-Up Studies, Glucose Tolerance Test, Humans, Hyperglycemia pathology, Insulin blood, Phospholipids blood, Prediabetic State pathology, Pregnancy, Principal Component Analysis, Diabetes Mellitus, Type 2 metabolism, Diabetes, Gestational metabolism, Hyperglycemia metabolism, Lipid Metabolism, Metabolome, Prediabetic State metabolism
- Abstract
Background: Blood-vessel dysfunction arises before overt hyperglycemia in type-2 diabetes (T2DM). We hypothesised that a metabolomic approach might identify metabolites/pathways perturbed in this pre-hyperglycemic phase. To test this hypothesis and for specific metabolite hypothesis generation, serum metabolic profiling was performed in young women at increased, intermediate and low risk of subsequent T2DM., Methods: Participants were stratified by glucose tolerance during a previous index pregnancy into three risk-groups: overt gestational diabetes (GDM; n = 18); those with glucose values in the upper quartile but below GDM levels (UQ group; n = 45); and controls (n = 43, below the median glucose values). Follow-up serum samples were collected at a mean 22 months postnatally. Samples were analysed in a random order using Ultra Performance Liquid Chromatography coupled to an electrospray hybrid LTQ-Orbitrap mass spectrometer. Statistical analysis included principal component (PCA) and multivariate methods., Findings: Significant between-group differences were observed at follow-up in waist circumference (86, 95%CI (79-91) vs 80 (76-84) cm for GDM vs controls, p<0.05), adiponectin (about 33% lower in GDM group, p = 0.004), fasting glucose, post-prandial glucose and HbA1c, but the latter 3 all remained within the 'normal' range. Substantial differences in metabolite profiles were apparent between the 2 'at-risk' groups and controls, particularly in concentrations of phospholipids (4 metabolites with p ≤ 0.01), acylcarnitines (3 with p ≤ 0.02), short- and long-chain fatty acids (3 with p< = 0.03), and diglycerides (4 with p ≤ 0.05)., Interpretation: Defects in adipocyte function from excess energy storage as relatively hypoxic visceral and hepatic fat, and impaired mitochondrial fatty acid oxidation may initiate the observed perturbations in lipid metabolism. Together with evidence from the failure of glucose-directed treatments to improve cardiovascular outcomes, these data and those of others indicate that a new, quite different definition of type-2 diabetes is required. This definition would incorporate disturbed lipid metabolism prior to hyperglycemia.
- Published
- 2014
- Full Text
- View/download PDF
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