29 results on '"Coolen, Silvia"'
Search Results
2. Microbiota of pest insect Nezara viridula mediate detoxification and plant defense repression
- Author
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Coolen, Silvia, Molen, Magda A. Rogowska-van der, Kwakernaak, Ineke, van Pelt, Johan A., Postma, Jelle L., van Alen, Theo, Jansen, Robert S., Welte, Cornelia U., Coolen, Silvia, Molen, Magda A. Rogowska-van der, Kwakernaak, Ineke, van Pelt, Johan A., Postma, Jelle L., van Alen, Theo, Jansen, Robert S., and Welte, Cornelia U.
- Abstract
The Southern green shield bug, Nezara viridula, is an invasive piercing and sucking pest insect that feeds on crop plants and poses a threat to global food production. Given that insects are known to live in a close relationship with microorganisms, our study provides insights into the community composition and function of the N. viridula-associated microbiota and its effect on host-plant interactions. We discovered that N. viridula hosts both vertically and horizontally transmitted microbiota throughout different developmental stages and their salivary glands harbor a thriving microbial community that is transmitted to the plant while feeding. The N. viridula microbiota was shown to aid its host with the detoxification of a plant metabolite, namely 3-nitropropionic acid, and repression of host plant defenses. Our results demonstrate that the N. viridula-associated microbiota plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.
- Published
- 2024
3. Mining the natural genetic variation in Arabidopsis thaliana for adaptation to sequential abiotic and biotic stresses
- Author
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Coolen, Silvia, Van Pelt, Johan A., Van Wees, Saskia C.M., and Pieterse, Corné M. J.
- Published
- 2019
4. Microbial degradation of plant toxins
- Author
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Rogowska‐van der Molen, Magda A., primary, Berasategui‐Lopez, Aileen, additional, Coolen, Silvia, additional, Jansen, Robert S., additional, and Welte, Cornelia U., additional
- Published
- 2023
- Full Text
- View/download PDF
5. Genome-wide association study reveals WRKY42 as a novel plant transcription factor that influences oviposition preference of Pieris butterflies
- Author
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Coolen, Silvia, Van Dijen, Marcel, Van Pelt, Johan A, Van Loon, Joop J A, Pieterse, Corné M J, Van Wees, Saskia C M, Coolen, Silvia, Van Dijen, Marcel, Van Pelt, Johan A, Van Loon, Joop J A, Pieterse, Corné M J, and Van Wees, Saskia C M
- Abstract
Insect herbivores are amongst the most destructive plant pests, damaging both naturally occurring and domesticated plants. As sessile organisms, plants make use of structural and chemical barriers to counteract herbivores. However, over 75% of herbivorous insect species are well adapted to their host’s defenses and these specialists are generally difficult to ward off. By actively antagonizing the number of insect eggs deposited on plants, future damage by the herbivore’s offspring can be limited. Therefore, it is important to understand which plant traits influence attractiveness for oviposition, especially for specialist insects that are well adapted to their host plants. In this study, we investigated the oviposition preference of Pieris butterflies (Lepidoptera: Pieridae) by offering them the choice between 350 different naturally occurring Arabidopsis accessions. Using a genome-wide association study of the oviposition data and subsequent fine mapping with full genome sequences of 164 accessions, we identified WRKY42 and AOC1 as candidate genes that are associated with the oviposition preference observed for Pieris butterflies. Host plant choice assays with Arabidopsis genotypes impaired in WRKY42 or AOC1 function confirmed a clear role for WRKY42 in oviposition preference of female Pieris butterflies, while for AOC1 the effect was mild. In contrast, WRKY42-impaired plants, which were preferred for oviposition by butterflies, negatively impacted offspring performance. These findings exemplify that plant genotype can have opposite effects on oviposition preference and caterpillar performance. This knowledge can be used for breeding trap crops or crops that are unattractive for oviposition by pest insects.
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- 2023
6. Genome-wide association study reveals WRKY42 as a novel plant transcription factor that influences oviposition preference of Pieris butterflies
- Author
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Plant Microbe Interactions, Sub Plant-Microbe Interactions, Coolen, Silvia, Van Dijen, Marcel, Van Pelt, Johan A, Van Loon, Joop J A, Pieterse, Corné M J, Van Wees, Saskia C M, Plant Microbe Interactions, Sub Plant-Microbe Interactions, Coolen, Silvia, Van Dijen, Marcel, Van Pelt, Johan A, Van Loon, Joop J A, Pieterse, Corné M J, and Van Wees, Saskia C M
- Published
- 2023
7. Genome-wide association study reveals WRKY42 as a novel plant transcription factor that influences oviposition preference of Pieris butterflies
- Author
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Coolen, Silvia, primary, Van Dijen, Marcel, additional, Van Pelt, Johan A, additional, Van Loon, Joop J A, additional, Pieterse, Corné M J, additional, and Van Wees, Saskia C M, additional
- Published
- 2022
- Full Text
- View/download PDF
8. Insect Gut Isolate Pseudomonas sp. Strain Nvir Degrades the Toxic Plant Metabolite Nitropropionic Acid
- Author
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Rogowska-van der Molen, Magda A., primary, Nagornîi, Dmitrii, additional, Coolen, Silvia, additional, de Graaf, Rob M., additional, Berben, Tom, additional, van Alen, Theo, additional, Janssen, Mathilde A. C. H., additional, Rutjes, Floris P. J. T., additional, Jansen, Robert S., additional, and Welte, Cornelia U., additional
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- 2022
- Full Text
- View/download PDF
9. The secret life of insect-associated microbes and how they shape insect–plant interactions
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Coolen, Silvia, primary, Rogowska-van der Molen, Magda, additional, and Welte, Cornelia U, additional
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- 2022
- Full Text
- View/download PDF
10. secret life of insect-associated microbes and how they shape insect–plant interactions.
- Author
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Coolen, Silvia, Magda, Rogowska-van der-Molen, and Welte, Cornelia U
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PLANT defenses , *MICROORGANISMS , *MICROBIAL metabolism , *PLANT diseases , *SUSTAINABLE development , *PLANT diversity - Abstract
Insects are associated with a plethora of different microbes of which we are only starting to understand their role in shaping insect–plant interactions. Besides directly benefitting from symbiotic microbial metabolism, insects obtain and transmit microbes within their environment, making them ideal vectors and potential beneficiaries of plant diseases and microbes that alter plant defenses. To prevent damage, plants elicit stress-specific defenses to ward off insects and their microbiota. However, both insects and microbes harbor a wealth of adaptations that allow them to circumvent effective plant defense activation. In the past decades, it has become apparent that the enormous diversity and metabolic potential of insect-associated microbes may play a far more important role in shaping insect–plant interactions than previously anticipated. The latter may have implications for the development of sustainable pest control strategies. Therefore, this review sheds light on the current knowledge on multitrophic insect–microbe–plant interactions in a rapidly expanding field of research. [ABSTRACT FROM AUTHOR]
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- 2022
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11. Genome‐wide association study reveals novel players in defense hormone crosstalk in Arabidopsis
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Proietti, Silvia, Caarls, Lotte, Coolen, Silvia, Van Pelt, Johan A., Van Wees, Saskia C.M., and Pieterse, Corné M.J.
- Subjects
salicylic acid ,fungi ,jasmonic acid ,Arabidopsis ,food and beverages ,Chromosome Mapping ,Genetic Variation ,Original Articles ,Cyclopentanes ,Receptor Cross-Talk ,abscisic acid ,Botrytis cinerea ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Original Article ,Oxylipins ,Mamestra brassicae ,hormone crosstalk ,genome‐wide association (GWA) mapping ,Genome-Wide Association Study ,Signal Transduction - Abstract
Jasmonic acid (JA) regulates plant defenses against necrotrophic pathogens and insect herbivores. Salicylic acid (SA) and abscisic acid (ABA) can antagonize JA‐regulated defenses, thereby modulating pathogen or insect resistance. We performed a genome‐wide association (GWA) study on natural genetic variation in Arabidopsis thaliana for the effect of SA and ABA on the JA pathway. We treated 349 Arabidopsis accessions with methyl JA (MeJA), or a combination of MeJA and either SA or ABA, after which expression of the JA‐responsive marker gene PLANT DEFENSIN1.2 (PDF1.2) was quantified as a readout for GWA analysis. Both hormones antagonized MeJA‐induced PDF1.2 in the majority of the accessions but with a large variation in magnitude. GWA mapping of the SA‐ and ABA‐affected PDF1.2 expression data revealed loci associated with crosstalk. GLYI4 (encoding a glyoxalase) and ARR11 (encoding an Arabidopsis response regulator involved in cytokinin signalling) were confirmed by T‐DNA insertion mutant analysis to affect SA–JA crosstalk and resistance against the necrotroph Botrytis cinerea. In addition, At1g16310 (encoding a cation efflux family protein) was confirmed to affect ABA–JA crosstalk and susceptibility to Mamestra brassicae herbivory. Collectively, this GWA study identified novel players in JA hormone crosstalk with potential roles in the regulation of pathogen or insect resistance., Crosstalk between defense‐related hormones enables plants to finely tune their immune response to the plethora of attackers that they encounter in their environment. We mined the natural genetic variation in Arabidopsis thaliana for novel genes that are associated with positive or negative interactions that the stress hormones salicylic acid and abscisic acid have on jasmonic acid‐regulated defense responses. Through genome‐wide association mapping, we identified three novel genes with putative roles in hormone crosstalk and that impact the level of resistance against the necrotrophic pathogen Botrytis cinerea or the insect herbivore Mamestra brassicae.
- Published
- 2018
12. Genetic architecture of plant stress resistance: multi-trait genome-wide association mapping
- Author
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Thoen, Manus P M, Davila Olivas, Nelson H., Kloth, Karen J., Coolen, Silvia, Huang, Ping Ping, Aarts, Mark G M, Bac-Molenaar, Johanna A., Bakker, Jaap, Bouwmeester, Harro J., Broekgaarden, Colette, Bucher, Johan, Busscher-Lange, Jacqueline, Cheng, Xi, Fradin, Emilie F., Jongsma, Maarten A., Julkowska, Magdalena M., Keurentjes, Joost J B, Ligterink, Wilco, Pieterse, Corné M J, Ruyter-Spira, Carolien, Smant, Geert, Testerink, Christa, Usadel, Björn, van Loon, Joop J A, van Pelt, Johan A., van Schaik, Casper C., van Wees, Saskia C M, Visser, Richard G F, Voorrips, Roeland, Vosman, Ben, Vreugdenhil, Dick, Warmerdam, Sonja, Wiegers, Gerrie L., van Heerwaarden, Joost, Kruijer, Willem, van Eeuwijk, Fred A., Dicke, Marcel, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Plant Hormone Biology (SILS, FNWI), Plant Cell Biology (SILS, FNWI), and Plant Physiology (SILS, FNWI)
- Subjects
0106 biological sciences ,0301 basic medicine ,genome‐wide association mapping ,Physiology ,Arabidopsis ,Inheritance Patterns ,Genome-wide association study ,Plant Science ,01 natural sciences ,Wiskundige en Statistische Methoden - Biometris ,Laboratorium voor Plantenveredeling ,Plant Growth Regulators ,Laboratorium voor Plantenfysiologie ,Laboratory of Entomology ,PBR Groei & Ontwikkeling ,Abiotic component ,Genetics ,PBR Kwantitatieve aspecten ,Full Paper ,Entomology & Disease Management ,Chromosome Mapping ,food and beverages ,Full Papers ,PBR Breeding for growth and development ,PE&RC ,Phenotype ,ddc:580 ,Biometris ,Plant Production Systems ,BIOS Applied Metabolic Systems ,Laboratory of Plant Physiology ,DNA, Bacterial ,PBR Non host and insect resistance ,abiotic stress ,genome-wide association mapping ,Quantitative Trait Loci ,Single-nucleotide polymorphism ,Quantitative trait locus ,Biology ,Genes, Plant ,PBR Quantitative aspects of Plant Breeding ,03 medical and health sciences ,biotic stress ,Stress, Physiological ,Groep Koornneef ,BIOS Plant Development Systems ,Mathematical and Statistical Methods - Biometris ,Laboratorium voor Nematologie ,Genetic Association Studies ,Models, Genetic ,Abiotic stress ,Research ,Reproducibility of Results ,Robustness (evolution) ,Biotic stress ,Laboratorium voor Entomologie ,genetic architecture ,Genetic architecture ,Plant Breeding ,030104 developmental biology ,Plantaardige Productiesystemen ,Mutation ,multiple stresses ,EPS ,Laboratory of Nematology ,PBR Non host en Insectenresistentie ,Genome-Wide Association Study ,010606 plant biology & botany - Abstract
The new phytologist 213(3), 1346-1362 (2017). doi:10.1111/nph.14220, Published by Wiley-Blackwell, Oxford [u.a.]
- Published
- 2017
13. Mining the natural genetic variation in Arabidopsis thaliana for adaptation to sequential abiotic and biotic stresses
- Author
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Sub Plant-Microbe Interactions, Plant Microbe Interactions, Coolen, Silvia, Van Pelt, Johan A, Van Wees, Saskia C M, Pieterse, Corné M J, Sub Plant-Microbe Interactions, Plant Microbe Interactions, Coolen, Silvia, Van Pelt, Johan A, Van Wees, Saskia C M, and Pieterse, Corné M J
- Published
- 2019
14. Mining the natural genetic variation in Arabidopsis thaliana for adaptation to sequential abiotic and biotic stresses
- Author
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Coolen, Silvia, primary, Van Pelt, Johan A., additional, Van Wees, Saskia C. M., additional, and Pieterse, Corné M. J., additional
- Published
- 2018
- Full Text
- View/download PDF
15. Genome-wide association study reveals novel players in defense hormone crosstalk in Arabidopsis
- Author
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Plant Microbe Interactions, Sub Plant-Microbe Interactions, Proietti, Silvia, Caarls, Lotte, Coolen, Silvia, Van Pelt, Johan A, Van Wees, Saskia C M, Pieterse, Corné M J, Plant Microbe Interactions, Sub Plant-Microbe Interactions, Proietti, Silvia, Caarls, Lotte, Coolen, Silvia, Van Pelt, Johan A, Van Wees, Saskia C M, and Pieterse, Corné M J
- Published
- 2018
16. Genetic architecture of plant stress resistance: Multi-trait genome-wide association mapping
- Author
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Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Thoen, Manus P M, Davila Olivas, Nelson H., Kloth, Karen J., Coolen, Silvia, Huang, Ping Ping, Aarts, Mark G M, Bac-Molenaar, Johanna A., Bakker, Jaap, Bouwmeester, Harro J., Broekgaarden, Colette, Bucher, Johan, Busscher-Lange, Jacqueline, Cheng, Xi, Fradin, Emilie F., Jongsma, Maarten A., Julkowska, Magdalena M., Keurentjes, Joost J B, Ligterink, Wilco, Pieterse, Corné M J, Ruyter-Spira, Carolien, Smant, Geert, Testerink, Christa, Usadel, Björn, van Loon, Joop J A, van Pelt, Johan A., van Schaik, Casper C., van Wees, Saskia C M, Visser, Richard G F, Voorrips, Roeland, Vosman, Ben, Vreugdenhil, Dick, Warmerdam, Sonja, Wiegers, Gerrie L., van Heerwaarden, Joost, Kruijer, Willem, van Eeuwijk, Fred A., Dicke, Marcel, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Thoen, Manus P M, Davila Olivas, Nelson H., Kloth, Karen J., Coolen, Silvia, Huang, Ping Ping, Aarts, Mark G M, Bac-Molenaar, Johanna A., Bakker, Jaap, Bouwmeester, Harro J., Broekgaarden, Colette, Bucher, Johan, Busscher-Lange, Jacqueline, Cheng, Xi, Fradin, Emilie F., Jongsma, Maarten A., Julkowska, Magdalena M., Keurentjes, Joost J B, Ligterink, Wilco, Pieterse, Corné M J, Ruyter-Spira, Carolien, Smant, Geert, Testerink, Christa, Usadel, Björn, van Loon, Joop J A, van Pelt, Johan A., van Schaik, Casper C., van Wees, Saskia C M, Visser, Richard G F, Voorrips, Roeland, Vosman, Ben, Vreugdenhil, Dick, Warmerdam, Sonja, Wiegers, Gerrie L., van Heerwaarden, Joost, Kruijer, Willem, van Eeuwijk, Fred A., and Dicke, Marcel
- Published
- 2017
17. Genetic architecture of plant stress resistance: multi-trait genome-wide association mapping
- Author
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Thoen, H.P.M., Davila Olivas, N.H., Kloth, K.J., Coolen, Silvia, Huang, P., Aarts, M.G.M., Molenaar, J.A., Bakker, J., Bouwmeester, H.J., Broekgaarden, C., Bucher, J., Busscher-Lange, J., Cheng, X., van Dijk-Fradin, E.F., Jongsma, M.A., Julkowska, Magdalena M., Keurentjes, J.J.B., Ligterink, W., Pieterse, Corné M.J., Ruyter-Spira, C.P., Smant, G., van Schaik, C.C., van Wees, Saskia C.M., Visser, R.G.F., Voorrips, R.E., Vosman, B., Vreugdenhil, D., Warmerdam, S., Wiegers, G.L., van Heerwaarden, J., Kruijer, W.T., van Eeuwijk, F.A., Dicke, M., Thoen, H.P.M., Davila Olivas, N.H., Kloth, K.J., Coolen, Silvia, Huang, P., Aarts, M.G.M., Molenaar, J.A., Bakker, J., Bouwmeester, H.J., Broekgaarden, C., Bucher, J., Busscher-Lange, J., Cheng, X., van Dijk-Fradin, E.F., Jongsma, M.A., Julkowska, Magdalena M., Keurentjes, J.J.B., Ligterink, W., Pieterse, Corné M.J., Ruyter-Spira, C.P., Smant, G., van Schaik, C.C., van Wees, Saskia C.M., Visser, R.G.F., Voorrips, R.E., Vosman, B., Vreugdenhil, D., Warmerdam, S., Wiegers, G.L., van Heerwaarden, J., Kruijer, W.T., van Eeuwijk, F.A., and Dicke, M.
- Abstract
Plants are exposed to combinations of various biotic and abiotic stresses, but stress responses are usually investigated for single stresses only. Here, we investigated the genetic architecture underlying plant responses to 11 single stresses and several of their combinations by phenotyping 350 Arabidopsis thaliana accessions. A set of 214 000 single nucleotide polymorphisms (SNPs) was screened for marker-trait associations in genome-wide association (GWA) analyses using tailored multi-trait mixed models. Stress responses that share phytohormonal signaling pathways also share genetic architecture underlying these responses. After removing the effects of general robustness, for the 30 most significant SNPs, average quantitative trait locus (QTL) effect sizes were larger for dual stresses than for single stresses. Plants appear to deploy broad-spectrum defensive mechanisms influencing multiple traits in response to combined stresses. Association analyses identified QTLs with contrasting and with similar responses to biotic vs abiotic stresses, and below-ground vs above-ground stresses. Our approach allowed for an unprecedented comprehensive genetic analysis of how plants deal with a wide spectrum of stress conditions.
- Published
- 2017
18. Transcriptome dynamics of Arabidopsis during sequential biotic and abiotic stresses
- Author
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Coolen, Silvia, Proietti, Silvia, Hickman, Richard, Davila Olivas, Nelson H, Huang, Ping-Ping, Van Verk, Marcel C, Van Pelt, Johan A, Wittenberg, Alexander H J, De Vos, Martin, Prins, Marcel, Van Loon, Joop J A, Aarts, Mark G M, Dicke, Marcel, Pieterse, Corné M J, Van Wees, Saskia C M, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Plant Microbe Interactions, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, and Plant Microbe Interactions
- Subjects
0106 biological sciences ,0301 basic medicine ,Arabidopsis thaliana ,Adaptation, Biological ,Arabidopsis ,Gene regulatory network ,RNA-Seq ,gene regulatory network ,Plant Science ,01 natural sciences ,Transcriptome ,03 medical and health sciences ,Botrytis cinerea ,Gene Expression Regulation, Plant ,Stress, Physiological ,transcript profiling ,Botany ,Taverne ,Genetics ,Groep Koornneef ,RNA, Messenger ,Laboratory of Entomology ,Gene ,Abiotic component ,biology ,Sequence Analysis, RNA ,fungi ,drought stress ,food and beverages ,Cell Biology ,15. Life on land ,PE&RC ,Laboratorium voor Entomologie ,biology.organism_classification ,016-3950 ,030104 developmental biology ,Pieris rapae ,RNA, Plant ,plant hormones ,combinatorial plant stress ,EPS ,010606 plant biology & botany - Abstract
In nature, plants have to cope with a wide range of stress conditions that often occur simultaneously or in sequence. To investigate how plants cope with multi-stress conditions, we analyzed the dynamics of whole-transcriptome profiles of Arabidopsis thaliana exposed to six sequential double stresses inflicted by combinations of (1) infection by the fungus Botrytis cinerea, (2) herbivory by Pieris rapae, and (3) drought stress. Each of these stresses induced specific expression profiles over time, in which one third of all differentially expressed genes was shared by at least two single stresses. Of these, 394 genes were differentially expressed during all three stress conditions, albeit often in opposite directions. When two stresses were applied in sequence, plants displayed transcriptome profiles that were very similar to the second stress, irrespective of the nature of the first stress. Nevertheless, significant first-stress-signatures could be identified in the sequential stress profiles. Bioinformatic analysis of the dynamics of co-expressed gene clusters highlighted specific clusters and biological processes of which the timing of activation or repression was altered by a prior stress. The first-stress-signatures in second stress transcriptional profiles were remarkably often related to responses to phytohormones, strengthening the notion that hormones are global modulators of interactions between different types of stress. Because prior stresses can affect the level of tolerance against a subsequent stress (e.g. prior herbivory strongly affected B. cinerea resistance), the first-stress-signatures can provide important leads for the identification of molecular players that are decisive in the interactions between stress response pathways. This article is protected by copyright. All rights reserved.
- Published
- 2016
19. Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory
- Author
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Davila Olivas, Nelson H, Coolen, Silvia, Huang, Pingping, Severing, Edouard, van Verk, Marcel C, Hickman, Richard, Wittenberg, Alexander H J, de Vos, Martin, Prins, Marcel, van Loon, Joop J A, Aarts, Mark G M, van Wees, Saskia C M, Pieterse, Corné M J, Dicke, Marcel, Sub Plant-Microbe Interactions, Sub Bioinformatics, Dep Biologie, Plant Microbe Interactions, Sub Plant-Microbe Interactions, Sub Bioinformatics, Dep Biologie, and Plant Microbe Interactions
- Subjects
0106 biological sciences ,0301 basic medicine ,food.ingredient ,abiotic stress ,Physiology ,insect herbivory ,Arabidopsis ,Pieris rapae ,Plant Science ,01 natural sciences ,Transcriptome ,03 medical and health sciences ,Botrytis cinerea ,food ,Gene Expression Regulation, Plant ,Stress, Physiological ,Botany ,Taverne ,Plant defense against herbivory ,Groep Koornneef ,Animals ,Herbivory ,Laboratory of Entomology ,Botrytis ,Plant Diseases ,Abiotic component ,biology ,Abiotic stress ,fungi ,food and beverages ,biology.organism_classification ,PE&RC ,Laboratorium voor Entomologie ,RNAseq ,Droughts ,combined stresses ,030104 developmental biology ,multiple stresses ,EPS ,Butterflies ,transcriptome ,010606 plant biology & botany ,016-3939 - Abstract
In nature, plants are exposed to biotic and abiotic stresses that often occur simultaneously. Therefore, plant responses to combinations of stresses are most representative of how plants respond to stresses. We used RNAseq to assess temporal changes in the transcriptome of Arabidopsis thaliana to herbivory by Pieris rapae caterpillars, either alone or in combination with prior exposure to drought or infection with the necrotrophic fungus Botrytis cinerea. Pre-exposure to drought stress or Botrytis infection resulted in a significantly different timing of the caterpillar-induced transcriptional changes. Additionally, the combination of drought and P. rapae induced an extensive downregulation of A. thaliana genes involved in defence against pathogens. Despite a more substantial growth reduction observed for plants exposed to drought plus P. rapae feeding compared with P. rapae feeding alone, this did not affect weight increase of this specialist caterpillar. Plants respond to combined stresses with phenotypic and transcriptional changes that differ from the single stress situation. The effect of a previous exposure to drought or B. cinerea infection on transcriptional changes to caterpillars is largely overridden by the stress imposed by caterpillars, indicating that plants shift their response to the most recent stress applied.
- Published
- 2016
20. Microbiota of pest insect Nezara viridulamediate detoxification and plant defense repression
- Author
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Coolen, Silvia, Rogowska-van der Molen, Magda A, Kwakernaak, Ineke, van Pelt, Johan A, Postma, Jelle L, van Alen, Theo, Jansen, Robert S, and Welte, Cornelia U
- Abstract
The Southern green shield bug, Nezara viridula, is an invasive piercing and sucking pest insect that feeds on crop plants and poses a threat to global food production. Given that insects are known to live in a close relationship with microorganisms, our study provides insights into the community composition and function of the N. viridula-associated microbiota and its effect on host–plant interactions. We discovered that N. viridulahosts both vertically and horizontally transmitted microbiota throughout different developmental stages and their salivary glands harbor a thriving microbial community that is transmitted to the plant while feeding. The N. viridulamicrobiota was shown to aid its host with the detoxification of a plant metabolite, namely 3-nitropropionic acid, and repression of host plant defenses. Our results demonstrate that the N. viridula-associated microbiota plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.
- Published
- 2024
- Full Text
- View/download PDF
21. Transcriptome dynamics of Arabidopsis during sequential biotic and abiotic stresses
- Author
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Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Plant Microbe Interactions, Coolen, Silvia, Proietti, Silvia, Hickman, Richard, Davila Olivas, Nelson H, Huang, Ping-Ping, Van Verk, Marcel C, Van Pelt, Johan A, Wittenberg, Alexander H J, De Vos, Martin, Prins, Marcel, Van Loon, Joop J A, Aarts, Mark G M, Dicke, Marcel, Pieterse, Corné M J, Van Wees, Saskia C M, Sub Plant-Microbe Interactions, Dynamics of Innovation Systems, Plant Microbe Interactions, Coolen, Silvia, Proietti, Silvia, Hickman, Richard, Davila Olivas, Nelson H, Huang, Ping-Ping, Van Verk, Marcel C, Van Pelt, Johan A, Wittenberg, Alexander H J, De Vos, Martin, Prins, Marcel, Van Loon, Joop J A, Aarts, Mark G M, Dicke, Marcel, Pieterse, Corné M J, and Van Wees, Saskia C M
- Published
- 2016
22. Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory
- Author
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Sub Plant-Microbe Interactions, Sub Bioinformatics, Dep Biologie, Plant Microbe Interactions, Davila Olivas, Nelson H, Coolen, Silvia, Huang, Pingping, Severing, Edouard, van Verk, Marcel C, Hickman, Richard, Wittenberg, Alexander H J, de Vos, Martin, Prins, Marcel, van Loon, Joop J A, Aarts, Mark G M, van Wees, Saskia C M, Pieterse, Corné M J, Dicke, Marcel, Sub Plant-Microbe Interactions, Sub Bioinformatics, Dep Biologie, Plant Microbe Interactions, Davila Olivas, Nelson H, Coolen, Silvia, Huang, Pingping, Severing, Edouard, van Verk, Marcel C, Hickman, Richard, Wittenberg, Alexander H J, de Vos, Martin, Prins, Marcel, van Loon, Joop J A, Aarts, Mark G M, van Wees, Saskia C M, Pieterse, Corné M J, and Dicke, Marcel
- Published
- 2016
23. Genetic architecture of plant stress resistance: multi‐trait genome‐wide association mapping
- Author
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Thoen, Manus P. M., primary, Davila Olivas, Nelson H., additional, Kloth, Karen J., additional, Coolen, Silvia, additional, Huang, Ping‐Ping, additional, Aarts, Mark G. M., additional, Bac‐Molenaar, Johanna A., additional, Bakker, Jaap, additional, Bouwmeester, Harro J., additional, Broekgaarden, Colette, additional, Bucher, Johan, additional, Busscher‐Lange, Jacqueline, additional, Cheng, Xi, additional, Fradin, Emilie F., additional, Jongsma, Maarten A., additional, Julkowska, Magdalena M., additional, Keurentjes, Joost J. B., additional, Ligterink, Wilco, additional, Pieterse, Corné M. J., additional, Ruyter‐Spira, Carolien, additional, Smant, Geert, additional, Testerink, Christa, additional, Usadel, Björn, additional, Loon, Joop J. A., additional, Pelt, Johan A., additional, Schaik, Casper C., additional, Wees, Saskia C. M., additional, Visser, Richard G. F., additional, Voorrips, Roeland, additional, Vosman, Ben, additional, Vreugdenhil, Dick, additional, Warmerdam, Sonja, additional, Wiegers, Gerrie L., additional, Heerwaarden, Joost, additional, Kruijer, Willem, additional, Eeuwijk, Fred A., additional, and Dicke, Marcel, additional
- Published
- 2016
- Full Text
- View/download PDF
24. The DNAJB6 and DNAJB8 Protein Chaperones Prevent Intracellular Aggregation of Polyglutamine Peptides
- Author
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Gillis, Judith, primary, Schipper-Krom, Sabine, additional, Juenemann, Katrin, additional, Gruber, Anna, additional, Coolen, Silvia, additional, van den Nieuwendijk, Rian, additional, van Veen, Henk, additional, Overkleeft, Hermen, additional, Goedhart, Joachim, additional, Kampinga, Harm H., additional, and Reits, Eric A., additional
- Published
- 2013
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- View/download PDF
25. Insect Gut Isolate Pseudomonas sp. Strain Nvir Degrades the Toxic Plant Metabolite Nitropropionic Acid.
- Author
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der Molen, Magda A. Rogowska-van, Nagornîi, Dmitrii, Coolen, Silvia, de Graaf, Rob M., Berben, Tom, van Alen, Theo, Janssen, Mathilde A. C. H., Rutjes, Floris P. J. T., Jansen, Robert S., and Welte, Cornelia U.
- Subjects
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PLANT toxins , *STINKBUGS , *POISONOUS plants , *KREBS cycle , *FUSARIUM toxins , *GREENBUG , *TOXINS - Abstract
Nitropropionic acid (NPA) is a widely distributed naturally occurring nitroaliphatic toxin produced by leguminous plants and fungi. The Southern green shield bug feeds on leguminous plants and shows no symptoms of intoxication. Likewise, its gutassociated microorganisms are subjected to high levels of this toxic compound. In this study, we isolated a bacterium from this insect's gut system, classified as Pseudomonas sp. strain Nvir, that was highly resistant to NPA and was fully degrading it to inorganic nitrogen compounds and carbon dioxide. In order to understand the metabolic fate of NPA, we traced the fate of all atoms of the NPA molecule using isotope tracing experiments with [15N]NPA and [1-13C]NPA, in addition to experiments with uniformly 13C-labeled biomass that was used to follow the incorporation of 12C atoms from [U-12C]NPA into tricarboxylic acid cycle intermediates. With the help of genomics and transcriptomics, we uncovered the isolate's NPA degradation pathway, which involves a putative propionate-3-nitronate monooxygenase responsible for the first step of NPA degradation. The discovered protein shares only 32% sequence identity with previously described propionate-3-nitronate monooxygenases. Finally, we advocate that NPA-degrading bacteria might find application in biotechnology, and their unique enzymes might be used in biosynthesis, bioremediation, and in dealing with postharvest NPA contamination in economically important products. IMPORTANCE Plants have evolved sophisticated chemical defense mechanisms, such as the production of plant toxins in order to deter herbivores. One example of such a plant toxin is nitropropionic acid (NPA), which is produced by leguminous plants and also by certain fungi. In this project, we have isolated a bacterium from the intestinal tract of a pest insect, the Southern green shield bug, that is able to degrade NPA. Through a multiomics approach, we identified the respective metabolic pathway and determined the metabolic fate of all atoms of the NPA molecule. In addition, we provide a new genetic marker that can be used for genome mining toward NPA degradation. The discovery of degradation pathways of plant toxins by environmental bacteria opens new possibilities for pretreatment of contaminated food and feed sources and characterization of understudied enzymes allows their broad application in biotechnology. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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26. Unveiling Detoxifying Symbiosis and Dietary Influence on the Southern Green Shield Bug Microbiota.
- Author
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Rogowska-van der Molen MA, Savova HV, Janssen EAT, van Alen T, Coolen S, Jansen RS, and Welte CU
- Abstract
The Southern green shield bug, Nezara viridula, is an invasive piercing and sucking pest insect that feeds on crops and poses a threat to global food production. Insects live in close relationships with microorganisms providing their host with unique capabilities, such as resistance to toxic plant metabolites. In this study, we investigated the resistance to and detoxification of the plant metabolite 3-nitropropionic acid by core and transient members of the N. viridula microbial community. Microbial community members showed a different tolerance to the toxin and we determined that six out of eight strains detoxified 3-nitropropionic acid. Additionally, we determined that 3-nitropropionic acid might interfere with the biosynthesis and transport of L-leucine. Moreover, our study explored the influence of diet on the gut microbial composition of N. viridula, demonstrating that switching to a single-plant diet shifts the abundance of core microbes. In line with this, testing pairwise microbial interactions revealed that core microbiota members support each other and repress the growth of transient microorganisms. With this work, we provide novel insights into the factors shaping the insect gut microbial communities and demonstrate that N. viridula harbours many toxin-degrading bacteria that could support its resistance to plant defences., (© The Author(s) 2024. Published by Oxford University Press on behalf of FEMS.)
- Published
- 2024
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27. Genome-wide association study reveals WRKY42 as a novel plant transcription factor that influences oviposition preference of Pieris butterflies.
- Author
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Coolen S, Van Dijen M, Van Pelt JA, Van Loon JJA, Pieterse CMJ, and Van Wees SCM
- Subjects
- Animals, Female, Larva, Genome-Wide Association Study, Transcription Factors, Oviposition, Plant Breeding, Herbivory, Plants, Butterflies genetics, Arabidopsis genetics, Arabidopsis Proteins
- Abstract
Insect herbivores are amongst the most destructive plant pests, damaging both naturally occurring and domesticated plants. As sessile organisms, plants make use of structural and chemical barriers to counteract herbivores. However, over 75% of herbivorous insect species are well adapted to their host's defenses and these specialists are generally difficult to ward off. By actively antagonizing the number of insect eggs deposited on plants, future damage by the herbivore's offspring can be limited. Therefore, it is important to understand which plant traits influence attractiveness for oviposition, especially for specialist insects that are well adapted to their host plants. In this study, we investigated the oviposition preference of Pieris butterflies (Lepidoptera: Pieridae) by offering them the choice between 350 different naturally occurring Arabidopsis accessions. Using a genome-wide association study of the oviposition data and subsequent fine mapping with full genome sequences of 164 accessions, we identified WRKY42 and AOC1 as candidate genes that are associated with the oviposition preference observed for Pieris butterflies. Host plant choice assays with Arabidopsis genotypes impaired in WRKY42 or AOC1 function confirmed a clear role for WRKY42 in oviposition preference of female Pieris butterflies, while for AOC1 the effect was mild. In contrast, WRKY42-impaired plants, which were preferred for oviposition by butterflies, negatively impacted offspring performance. These findings exemplify that plant genotype can have opposite effects on oviposition preference and caterpillar performance. This knowledge can be used for breeding trap crops or crops that are unattractive for oviposition by pest insects., (© The Author(s) 2022. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Published
- 2023
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28. Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory.
- Author
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Davila Olivas NH, Coolen S, Huang P, Severing E, van Verk MC, Hickman R, Wittenberg AH, de Vos M, Prins M, van Loon JJ, Aarts MG, van Wees SC, Pieterse CM, and Dicke M
- Subjects
- Animals, Arabidopsis physiology, Botrytis physiology, Butterflies physiology, Droughts, Herbivory, Stress, Physiological, Arabidopsis genetics, Gene Expression Regulation, Plant, Plant Diseases microbiology, Transcriptome
- Abstract
In nature, plants are exposed to biotic and abiotic stresses that often occur simultaneously. Therefore, plant responses to combinations of stresses are most representative of how plants respond to stresses. We used RNAseq to assess temporal changes in the transcriptome of Arabidopsis thaliana to herbivory by Pieris rapae caterpillars, either alone or in combination with prior exposure to drought or infection with the necrotrophic fungus Botrytis cinerea. Pre-exposure to drought stress or Botrytis infection resulted in a significantly different timing of the caterpillar-induced transcriptional changes. Additionally, the combination of drought and P. rapae induced an extensive downregulation of A. thaliana genes involved in defence against pathogens. Despite a more substantial growth reduction observed for plants exposed to drought plus P. rapae feeding compared with P. rapae feeding alone, this did not affect weight increase of this specialist caterpillar. Plants respond to combined stresses with phenotypic and transcriptional changes that differ from the single stress situation. The effect of a previous exposure to drought or B. cinerea infection on transcriptional changes to caterpillars is largely overridden by the stress imposed by caterpillars, indicating that plants shift their response to the most recent stress applied., (© 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.)
- Published
- 2016
- Full Text
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29. Transcriptome dynamics of Arabidopsis during sequential biotic and abiotic stresses.
- Author
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Coolen S, Proietti S, Hickman R, Davila Olivas NH, Huang PP, Van Verk MC, Van Pelt JA, Wittenberg AH, De Vos M, Prins M, Van Loon JJ, Aarts MG, Dicke M, Pieterse CM, and Van Wees SC
- Subjects
- Adaptation, Biological, Arabidopsis metabolism, Arabidopsis physiology, RNA, Messenger metabolism, RNA, Plant metabolism, Sequence Analysis, RNA, Arabidopsis genetics, Gene Expression Regulation, Plant, Stress, Physiological, Transcriptome
- Abstract
In nature, plants have to cope with a wide range of stress conditions that often occur simultaneously or in sequence. To investigate how plants cope with multi-stress conditions, we analyzed the dynamics of whole-transcriptome profiles of Arabidopsis thaliana exposed to six sequential double stresses inflicted by combinations of: (i) infection by the necrotrophic fungus Botrytis cinerea, (ii) herbivory by chewing larvae of Pieris rapae, and (iii) drought stress. Each of these stresses induced specific expression profiles over time, in which one-third of all differentially expressed genes was shared by at least two single stresses. Of these, 394 genes were differentially expressed during all three stress conditions, albeit often in opposite directions. When two stresses were applied in sequence, plants displayed transcriptome profiles that were very similar to the second stress, irrespective of the nature of the first stress. Nevertheless, significant first-stress signatures could be identified in the sequential stress profiles. Bioinformatic analysis of the dynamics of co-expressed gene clusters highlighted specific clusters and biological processes of which the timing of activation or repression was altered by a prior stress. The first-stress signatures in second stress transcriptional profiles were remarkably often related to responses to phytohormones, strengthening the notion that hormones are global modulators of interactions between different types of stress. Because prior stresses can affect the level of tolerance against a subsequent stress (e.g. prior herbivory strongly affected resistance to B. cinerea), the first-stress signatures can provide important leads for the identification of molecular players that are decisive in the interactions between stress response pathways., (© 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd.)
- Published
- 2016
- Full Text
- View/download PDF
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