92 results on '"Cook WD"'
Search Results
2. Output-specific input-assurance regions in DEA
- Author
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Cook, WD and Zhu, J
- Published
- 2011
3. Phenotypic effect correlating with loss of a novel tumor suppressor gene: towards cloning by complementation
- Author
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Cook, WD and Alexander, BJ
- Published
- 1998
- Full Text
- View/download PDF
4. Prioritising highway accident sites: a data envelopment analysis model
- Author
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Cook, WD, Kazakov, A., and Persaud, BN
- Subjects
Traffic accidents -- Models ,Data envelopment analysis -- Usage - Abstract
This paper presents an optimisation procedure for prioritising highway accident sites. The methodology (data envelopment analysis) takes into account the multidimensional nature of the problem. Specifically, it recognises that different accident types on a road section should be credited with different weights, but permits such weights to vary (within reasonable limits) from section to section. The methodology also permits the inclusion of multiple inputs on the resource side, including not only the cost of repair, but factors such as driver inconvenience. Keywords: road transport; accidents; retrofit; DEA; prioritisation
- Published
- 2001
5. Necroptosis induced by RIPK3 requires MLKL but not Drp1
- Author
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Moujalled, DM, Cook, WD, Murphy, JM, Vaux, DL, Moujalled, DM, Cook, WD, Murphy, JM, and Vaux, DL
- Abstract
Necroptosis is a mechanism by which cells can kill themselves that does not require caspase activity or the presence of the pro-apoptotic Bcl-2 family members Bax or Bak. It has been reported that RIPK3 (receptor interacting protein kinase 3) activates MLKL (mixed lineage kinase domain-like) to cause cell death that requires dynamin-related protein 1 (Drp1), because survival was increased in cells depleted of Drp1 or treated with the Drp1 inhibitor mdivi-1. To analyze necroptosis in a system that does not require addition of tumor necrosis factor (TNF), we used a construct that allows RIPK3 to be induced in cells, and then dimerized via an E. coli gyrase domain fused to its carboxyl-terminus, using the dimeric gyrase binding antibiotic coumermycin. We have previously shown elsewhere that RIPK3 dimerized in this manner not only induces necroptosis but also apoptosis, which can be inhibited by the broad-spectrum caspase inhibitor Q-VD-OPh (QVD). In response to RIPK3 dimerization, wild-type mouse embryonic fibroblasts (MEFs) underwent cell death that was reduced but not completely blocked by QVD. In contrast, death upon dimerization of RIPK3 in Mlkl(-/-) MEFs was completely inhibited with QVD, confirming that MLKL is required for necroptosis. Similar to wild-type MEFs, most Drp1(-/-) MEFs died when RIPK3 was activated, even in the presence of QVD. Furthermore, overexpression of wild-type MLKL or dominant active mutants of MLKL (Q343A or S345E/S347E) caused death of wild-type and Drp1(-/-) MEFs that was not inhibited with QVD. These results indicate that necroptosis caused by RIPK3 requires MLKL but not Drp1.
- Published
- 2014
6. TNF can activate RIPK3 and cause programmed necrosis in the absence of RIPK1
- Author
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Moujalled, DM, Cook, WD, Okamoto, T, Murphy, J, Lawlor, KE, Vince, JE, Vaux, DL, Moujalled, DM, Cook, WD, Okamoto, T, Murphy, J, Lawlor, KE, Vince, JE, and Vaux, DL
- Abstract
Ligation of tumor necrosis factor receptor 1 (TNFR1) can cause cell death by caspase 8 or receptor-interacting protein kinase 1 (RIPK1)- and RIPK3-dependent mechanisms. It has been assumed that because RIPK1 bears a death domain (DD), but RIPK3 does not, RIPK1 is necessary for recruitment of RIPK3 into signaling and death-inducing complexes. To test this assumption, we expressed elevated levels of RIPK3 in murine embryonic fibroblasts (MEFs) from wild-type (WT) and gene-deleted mice, and exposed them to TNF. Neither treatment with TNF nor overexpression of RIPK3 alone caused MEFs to die, but when levels of RIPK3 were increased, addition of TNF killed WT, Ripk1(-/-), caspase 8(-/-), and Bax(-/-)/Bak(-/-) MEFs, even in the presence of the broad-spectrum caspase inhibitor Q-VD-OPh. In contrast, Tnfr1(-/-) and Tradd(-/-) MEFs did not die. These results show for the first time that in the absence of RIPK1, TNF can activate RIPK3 to induce cell death both by a caspase 8-dependent mechanism and by a separate Bax/Bak- and caspase-independent mechanism. RIPK1 is therefore not essential for TNF to activate RIPK3 to induce necroptosis nor for the formation of a functional ripoptosome/necrosome.
- Published
- 2013
7. TAK1 Is Required for Survival of Mouse Fibroblasts Treated with TRAIL, and Does So by NF-kappa B Dependent Induction of cFLIPL
- Author
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Bergmann, A, Lluis, JM, Nachbur, U, Cook, WD, Gentle, IE, Moujalled, D, Moulin, M, Wong, WW-L, Khan, N, Chau, D, Callus, BA, Vince, JE, Silke, J, Vaux, DL, Bergmann, A, Lluis, JM, Nachbur, U, Cook, WD, Gentle, IE, Moujalled, D, Moulin, M, Wong, WW-L, Khan, N, Chau, D, Callus, BA, Vince, JE, Silke, J, and Vaux, DL
- Abstract
Tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) is known as a "death ligand"-a member of the TNF superfamily that binds to receptors bearing death domains. As well as causing apoptosis of certain types of tumor cells, TRAIL can activate both NF-kappaB and JNK signalling pathways. To determine the role of TGF-beta-Activated Kinase-1 (TAK1) in TRAIL signalling, we analyzed the effects of adding TRAIL to mouse embryonic fibroblasts (MEFs) derived from TAK1 conditional knockout mice. TAK1-/- MEFs were significantly more sensitive to killing by TRAIL than wild-type MEFs, and failed to activate NF-kappaB or JNK. Overexpression of IKK2-EE, a constitutive activator of NF-kappaB, protected TAK1-/- MEFs against TRAIL killing, suggesting that TAK1 activation of NF-kappaB is critical for the viability of cells treated with TRAIL. Consistent with this model, TRAIL failed to induce the survival genes cIAP2 and cFlipL in the absence of TAK1, whereas activation of NF-kappaB by IKK2-EE restored the levels of both proteins. Moreover, ectopic expression of cFlipL, but not cIAP2, in TAK1-/- MEFs strongly inhibited TRAIL-induced cell death. These results indicate that cells that survive TRAIL treatment may do so by activation of a TAK1-NF-kappaB pathway that drives expression of cFlipL, and suggest that TAK1 may be a good target for overcoming TRAIL resistance.
- Published
- 2010
8. Identification of an Xiap-Like Pseudogene on Mouse Chromosome 7
- Author
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Bergmann, A, Kotevski, A, Cook, WD, Vaux, DL, Callus, BA, Bergmann, A, Kotevski, A, Cook, WD, Vaux, DL, and Callus, BA
- Abstract
The most thoroughly characterized mammalian IAP is XIAP/BIRC4, which can inhibit caspases 9, 3 and 7, but may also regulate apoptosis through interactions with other proteins such as Smac/DIABLO, HtrA2/Omi, XAF1, TAK1, cIAP1, and cIAP2.High throughput sequencing of the mouse genome revealed the existence of a gene resembling Xiap/Birc4 on mouse chromosome 7. To confirm the existence of this gene, and to determine its functional significance, we performed Southern and Northern blot analysis. This showed the presence of the Xiap-like gene in both wild-type and Xiap gene knock-out mice, but the corresponding mRNA was not detected in any tissues examined by Northern blot. Analysis of the gene sequence in all three possible reading frames predicts that expression of this gene would not give rise to a full-length protein, but only non-functional truncated polypeptides. Because its nucleotide sequence is 92% identical to Xiap, but it has no introns corresponding to those of Xiap, we conclude that Xiap-ps1 is a pseudogene generated by retro-transposition of a spliced Xiap message to chromosome 7.
- Published
- 2009
9. Implementations of robotics: Identifying efficient implementors
- Author
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Cook, WD, primary, Johnston, DA, additional, and McCutcheon, D, additional
- Published
- 1992
- Full Text
- View/download PDF
10. A PHOTOCURED COMPOSITE RESIN WITH AN APPARENT INFINITE DEPTH OF CURE: Current Notes No. 61
- Author
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Cook Wd and Thomasz F
- Subjects
Materials science ,Composite number ,Composite material ,General Dentistry - Published
- 1983
11. Effects of network structures on the tensile toughness of copper-catalyzed azide-alkyne cycloaddition (CuAAC)-based photopolymers.
- Author
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Song HB, Sowan N, Baranek A, Sinha J, Cook WD, and Bowman CN
- Abstract
In the present study, the photo-initiated copper-catalyzed azide-alkyne cycloaddition (CuAAC) polymerization was utilized to form structurally diverse glassy polymer networks. Systematic alterations in the monomer backbone rigidity (e.g., cyclic or aliphatic groups with a different length of backbone) and the reactive functional group density (e.g., tetra-, tri-, di-, and mono-functional azide and alkyne monomers) were used to provide readily tailorable network structures with crosslink densities (estimated from the rubbery modulus) varying by a factor of over 20. All eight of the resultant networks exhibited glass transition temperatures (T
g ) between 50 and 80 °C with tensile toughness ranging from 28 to 61 MJ m-3 . A nearly linear dependence of yield stress and elongation at break (broadly defined as strength and ductility, respectively) on the Tg and rubbery modulus was established in these triazole networks. When a flexible di-alkyne monomer (5 carbon spacing between alkynes) was incorporated in a network composed of a tri-alkyne and di-azide monomer, the elongation at break was improved from 166 to 300 %, while the yield stress was reduced from 36 to 23 MPa. Additionally, the polymer ductility was also varied by incorporating mono-functional azides as chain ends in the network - replacing a sterically hindered stiff mono-azide with a more flexible mono-azide increased the elongation at break from 24 to 185 % and the tensile toughness from 6 to 28 MJ m-3 ., Competing Interests: The authors declare no competing financial interest.- Published
- 2021
- Full Text
- View/download PDF
12. Increased Cardiomyocyte Alignment and Intracellular Calcium Transients Using Micropatterned and Drug-Releasing Poly(Glycerol Sebacate) Elastomers.
- Author
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Zhu C, Rodda AE, Truong VX, Shi Y, Zhou K, Haynes JM, Wang B, Cook WD, and Forsythe JS
- Abstract
Myocardial tissue engineering is a promising therapy for myocardial infarction recovery. The success of myocardial tissue engineering is likely to rely on the combination of cardiomyocytes, prosurvival regulatory signals, and a flexible biomaterial structure that can deliver them. In this study, poly(glycerol sebacate) (PGS), which exhibits stable elasticity under repeated tensile loading, was engineered to provide physical features that aligned cardiomyocytes in a similar manner to that seen in native cardiac tissue. In addition, a small molecule mimetic of brain derived neurotrophic factor (BDNF) was polymerized into the PGS to achieve a continuous and steady release. Micropatterning of PGS elastomers increased cell alignment, calcium transient homogeneity, and cell connectivity. The intensity of the calcium transients in cardiomyocytes was enhanced when cultured on PGS which released a small molecule BDNF mimetic. This study demonstrates that robust micropatterned elastomer films are a potential candidate for the delivery of functional cardiomyocytes and factors to the injured or dysfunctional myocardium, as well as providing novel in vitro platforms to study cardiomyocyte physiology.
- Published
- 2018
- Full Text
- View/download PDF
13. Photopolymerized Triazole-Based Glassy Polymer Networks with Superior Tensile Toughness.
- Author
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Song HB, Baranek A, Worrell BT, Bowman CN, and Cook WD
- Abstract
Photopolymerization is a ubiquitous, indispensable technique widely applied in applications from coatings, inks, and adhesives to thermosetting restorative materials for medical implants, and the fabrication of complex macro-scale, microscale, and nanoscale 3D architectures via additive manufacturing. However, due to the brittleness inherent in the dominant acrylate-based photopolymerized networks, a significant need exists for higher performance resin/oligomer formulations to create tough, defect-free, mechanically ductile, thermally and chemically resistant, high modulus network polymers with rapid photocuring kinetics. This study presents densely cross-linked triazole-based glassy photopolymers capable of achieving preeminent toughness of ≈70 MJ m
-3 and 200% strain at ambient temperature, comparable to conventional tough thermoplastics. Formed either via photoinitiated copper(I)-catalyzed cycloaddition of monomers containing azide and alkyne groups (CuAAC) or via photoinitiated thiol-ene reactions from monomers containing triazole rings, these triazole-containing thermosets completely recover their original dimensions and mechanical behavior after repeated deformations of 50% strain in the glassy state over multiple thermal recovery-strain cycles., Competing Interests: Conflict of Interest The authors declare no conflict of interest.- Published
- 2018
- Full Text
- View/download PDF
14. Photopolymerization study and adhesive properties of self-etch adhesives containing bis(acyl)phosphine oxide initiator.
- Author
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Besse V, Derbanne MA, Pham TN, Cook WD, and Le Pluart L
- Subjects
- Acid Etching, Dental, Calorimetry instrumentation, Camphor analogs & derivatives, Camphor chemistry, Esters chemistry, Humans, Polymerization, Shear Strength, Dental Cements chemistry, Dentin chemistry, Light-Curing of Dental Adhesives, Phosphines chemistry, Photoinitiators, Dental chemistry
- Abstract
Objective: This paper investigates the photo-co-polymerization behavior of a blend of a diacrylamide (DEBAAP) with a phosphonylated acidic monomer using either bis(acyl)phosphine oxide or camphorquinone/amine as photo-initiator and studies the effect of variation of the structure of the phosphonylated acidic monomer on the shear bond strength to human dentin., Methods: Photopolymerization kinetics has been assessed through the use of photo-DSC with either initiating system and with and without a phosphonic acid monomer, while the shear bond strengths (SBS) of dentin bonding agents formulated with several phosphonylated acidic monomers have been evaluated by macro SBS testing on human dentin., Results: Photo-DSC results show that bis(acyl)phosphine oxide initiates a faster polymerization than camphorquinone/amine and that both photopolymerizations are accelerated by the phosphonic acid monomer. Similar results were obtained between adhesives based on camphorquinone/amine and a commercial adhesive (AdheSE, Ivoclar-Vivadent, Schaan, Liechtenstein). The best performances were obtained when BAPO was used as the initiator, in many cases far better than the commercial adhesive. Adhesive SEA6 based on difluoromethylphosphonic acid C demonstrated the best adhesion results of this study. Significance The bis(acyl)phosphine oxide photo-initiator causes faster photopolymerization of two-step self-etching dental adhesive, and its use could yield better bonding performance., (Copyright © 2016 Academy of Dental Materials. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
15. In TNF-stimulated cells, RIPK1 promotes cell survival by stabilizing TRAF2 and cIAP1, which limits induction of non-canonical NF-κB and activation of caspase-8.
- Author
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Gentle IE, Wong WW, Evans JM, Bankovacki A, Cook WD, Khan NR, Nachbur U, Rickard J, Anderton H, Moulin M, Lluis JM, Moujalled DM, Silke J, and Vaux DL
- Published
- 2016
- Full Text
- View/download PDF
16. Response to Heard et al.
- Author
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Moulin M, Voss AK, Thomas T, Wong WW, Cook WD, Koentgen F, Vince J, Silke J, and Vaux DL
- Subjects
- Animals, Female, Male, Inhibitor of Apoptosis Proteins metabolism, Receptor-Interacting Protein Serine-Threonine Kinases metabolism, Receptors, Tumor Necrosis Factor, Type I metabolism
- Published
- 2015
- Full Text
- View/download PDF
17. RIPK1- and RIPK3-induced cell death mode is determined by target availability.
- Author
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Cook WD, Moujalled DM, Ralph TJ, Lock P, Young SN, Murphy JM, and Vaux DL
- Subjects
- Aminocoumarins metabolism, Animals, Caspase 3 metabolism, Caspase 8 metabolism, Cell Line, Fas-Associated Death Domain Protein metabolism, Mice, Mice, Knockout, Protein Kinases metabolism, Protein Structure, Quaternary, Protein Structure, Tertiary, Recombinant Proteins genetics, Signal Transduction genetics, Tumor Necrosis Factor-alpha metabolism, Apoptosis genetics, Protein Multimerization genetics, Receptor-Interacting Protein Serine-Threonine Kinases genetics, Recombinant Proteins metabolism
- Abstract
Both receptor-interacting protein kinase 1 (RIPK1) and RIPK3 can signal cell death following death receptor ligation. To study the requirements for RIPK-triggered cell death in the absence of death receptor signaling, we engineered inducible versions of RIPK1 and RIPK3 that can be activated by dimerization with the antibiotic coumermycin. In the absence of TNF or other death ligands, expression and dimerization of RIPK1 was sufficient to cause cell death by caspase- or RIPK3-dependent mechanisms. Dimerized RIPK3 induced cell death by an MLKL-dependent mechanism but, surprisingly, also induced death mediated by FADD, caspase 8 and RIPK1. Catalytically active RIPK3 kinase domains were essential for MLKL-dependent but not for caspase 8-dependent death. When RIPK1 or RIPK3 proteins were dimerized, the mode of cell death was determined by the availability of downstream molecules such as FADD, caspase 8 and MLKL. These observations imply that rather than a 'switch' operating between the two modes of cell death, the final mechanism depends on levels of the respective signaling and effector proteins.
- Published
- 2014
- Full Text
- View/download PDF
18. Necroptosis induced by RIPK3 requires MLKL but not Drp1.
- Author
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Moujalled DM, Cook WD, Murphy JM, and Vaux DL
- Subjects
- Aminocoumarins pharmacology, Animals, Anti-Bacterial Agents pharmacology, Caspase Inhibitors pharmacology, Cell Line, Dynamins deficiency, Dynamins genetics, Fibroblasts drug effects, Fibroblasts pathology, Mice, Mice, Knockout, Mutation, Necrosis, Protein Kinases deficiency, Protein Kinases genetics, Protein Multimerization, Receptor-Interacting Protein Serine-Threonine Kinases genetics, Recombinant Fusion Proteins metabolism, Time Factors, Transfection, Tumor Necrosis Factor-alpha pharmacology, Apoptosis drug effects, Dynamins metabolism, Fibroblasts enzymology, Protein Kinases metabolism, Receptor-Interacting Protein Serine-Threonine Kinases metabolism, Signal Transduction drug effects
- Abstract
Necroptosis is a mechanism by which cells can kill themselves that does not require caspase activity or the presence of the pro-apoptotic Bcl-2 family members Bax or Bak. It has been reported that RIPK3 (receptor interacting protein kinase 3) activates MLKL (mixed lineage kinase domain-like) to cause cell death that requires dynamin-related protein 1 (Drp1), because survival was increased in cells depleted of Drp1 or treated with the Drp1 inhibitor mdivi-1. To analyze necroptosis in a system that does not require addition of tumor necrosis factor (TNF), we used a construct that allows RIPK3 to be induced in cells, and then dimerized via an E. coli gyrase domain fused to its carboxyl-terminus, using the dimeric gyrase binding antibiotic coumermycin. We have previously shown elsewhere that RIPK3 dimerized in this manner not only induces necroptosis but also apoptosis, which can be inhibited by the broad-spectrum caspase inhibitor Q-VD-OPh (QVD). In response to RIPK3 dimerization, wild-type mouse embryonic fibroblasts (MEFs) underwent cell death that was reduced but not completely blocked by QVD. In contrast, death upon dimerization of RIPK3 in Mlkl(-/-) MEFs was completely inhibited with QVD, confirming that MLKL is required for necroptosis. Similar to wild-type MEFs, most Drp1(-/-) MEFs died when RIPK3 was activated, even in the presence of QVD. Furthermore, overexpression of wild-type MLKL or dominant active mutants of MLKL (Q343A or S345E/S347E) caused death of wild-type and Drp1(-/-) MEFs that was not inhibited with QVD. These results indicate that necroptosis caused by RIPK3 requires MLKL but not Drp1.
- Published
- 2014
- Full Text
- View/download PDF
19. Mechanically tissue-like elastomeric polymers and their potential as a vehicle to deliver functional cardiomyocytes.
- Author
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Xu B, Li Y, Fang X, Thouas GA, Cook WD, Newgreen DF, and Chen Q
- Subjects
- Animals, Cell Proliferation drug effects, Cell Survival drug effects, Glycerol chemistry, Humans, Materials Testing, Mice, Myocytes, Cardiac drug effects, Polyesters, Stress, Mechanical, Tensile Strength, Tissue Scaffolds chemistry, Biocompatible Materials chemistry, Biocompatible Materials pharmacology, Decanoates chemistry, Elastomers chemistry, Glycerol analogs & derivatives, Lactic Acid chemistry, Mechanical Phenomena, Myocytes, Cardiac cytology, Polymers chemistry
- Abstract
One of the major challenges in the field of biomaterials engineering is the replication of the non-linear elasticity observed in soft tissues. In the present study, non-linearly elastic biomaterials were successfully fabricated from a chemically cross-linked elastomeric poly(glycerol sebacate) (PGS) and thermoplastic poly(L-lactic acid) (PLLA) using the core/shell electrospinning technique. The spun fibrous materials, containing a PGS core and PLLA shell, demonstrated J-shaped stress-strain curves, and having ultimate tensile strength, rupture elongation, and stiffness constants respectively comparable to muscle tissue properties. In vitro evaluations also showed that PGS/PLLA fibrous biomaterials possess excellent biocompatibility, capable of supporting human stem-cell-derived cardiomyocytes over several weeks in culture. Therefore, the core/shell electrospun elastomeric materials provide a new potential scaffold to support cells in the therapy of a wide range of soft tissues exposed to cyclic deformation, such as tendon, ligament, cardiac or smooth muscle and lung epithelium., (Copyright © 2013. Published by Elsevier Ltd.)
- Published
- 2013
- Full Text
- View/download PDF
20. A comparative study on poly(xylitol sebacate) and poly(glycerol sebacate): mechanical properties, biodegradation and cytocompatibility.
- Author
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Li Y, Huang W, Cook WD, and Chen Q
- Subjects
- Animals, Biomechanical Phenomena, Cell Line, Cell Proliferation, Elastomers chemistry, Esterification, Fibroblasts cytology, Glycerol chemistry, Materials Testing, Mice, Xylitol chemistry, Biocompatible Materials chemistry, Decanoates chemistry, Glycerol analogs & derivatives, Polymers chemistry, Xylitol analogs & derivatives
- Abstract
In order to develop degradable elastomers with a satisfactory combination of flexibility and enzyme-mediated degradation rate, the mechanical properties, enzymatic degradation kinetics and biocompatibility of poly(xylitol sebcate) (PXS) has been systematically investigated in comparison with poly(glycerol sebacate) (PGS). Under the same level of crosslinked density, the PXS elastomer networks have approximately twice the stretchability (elongation at break) of their PGS counterparts. This observation is attributable to the relatively longer and more orientable xylitol monomers, compared with glycerol molecules. Although xylitol monomers have two more hydroxyl groups, we, surprisingly, found that the hydrophilic side chains did not accelerate the water attack on the ester bonds of the PXS network, compared with their PGS counterpart. This observation was attributed to a steric hindrance effect, i.e. the large-sized hydroxyl groups can shield ester bonds from the attack of water molecules. In conclusion, the use of polyols of more than three -OH groups is an effective approach enhancing flexibility, whilst maintaining the degradation rate of polyester elastomers. Further development could be seen in the copolymerization of PPS with appropriate thermoplastic polyesters, such as poly(lactic acid) and polyhydroxyalkanoate.
- Published
- 2013
- Full Text
- View/download PDF
21. TNF can activate RIPK3 and cause programmed necrosis in the absence of RIPK1.
- Author
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Moujalled DM, Cook WD, Okamoto T, Murphy J, Lawlor KE, Vince JE, and Vaux DL
- Subjects
- Amino Acid Chloromethyl Ketones pharmacology, Animals, Apoptosis drug effects, Caspase 8 genetics, Caspase 8 metabolism, Caspase Inhibitors pharmacology, Cell Line, Fibroblasts drug effects, Fibroblasts metabolism, Fibroblasts pathology, Mice, Necrosis, Quinolines pharmacology, Receptor-Interacting Protein Serine-Threonine Kinases genetics, Receptors, Tumor Necrosis Factor, Type I deficiency, Receptors, Tumor Necrosis Factor, Type I genetics, Receptors, Tumor Necrosis Factor, Type I metabolism, Recombinant Proteins biosynthesis, Recombinant Proteins genetics, Recombinant Proteins pharmacology, TNF Receptor-Associated Death Domain Protein deficiency, TNF Receptor-Associated Death Domain Protein genetics, TNF Receptor-Associated Death Domain Protein metabolism, Tumor Necrosis Factor-alpha genetics, Tumor Necrosis Factor-alpha metabolism, bcl-2 Homologous Antagonist-Killer Protein deficiency, bcl-2 Homologous Antagonist-Killer Protein genetics, bcl-2 Homologous Antagonist-Killer Protein metabolism, bcl-2-Associated X Protein deficiency, bcl-2-Associated X Protein genetics, bcl-2-Associated X Protein metabolism, Receptor-Interacting Protein Serine-Threonine Kinases metabolism, Tumor Necrosis Factor-alpha pharmacology
- Abstract
Ligation of tumor necrosis factor receptor 1 (TNFR1) can cause cell death by caspase 8 or receptor-interacting protein kinase 1 (RIPK1)- and RIPK3-dependent mechanisms. It has been assumed that because RIPK1 bears a death domain (DD), but RIPK3 does not, RIPK1 is necessary for recruitment of RIPK3 into signaling and death-inducing complexes. To test this assumption, we expressed elevated levels of RIPK3 in murine embryonic fibroblasts (MEFs) from wild-type (WT) and gene-deleted mice, and exposed them to TNF. Neither treatment with TNF nor overexpression of RIPK3 alone caused MEFs to die, but when levels of RIPK3 were increased, addition of TNF killed WT, Ripk1(-/-), caspase 8(-/-), and Bax(-/-)/Bak(-/-) MEFs, even in the presence of the broad-spectrum caspase inhibitor Q-VD-OPh. In contrast, Tnfr1(-/-) and Tradd(-/-) MEFs did not die. These results show for the first time that in the absence of RIPK1, TNF can activate RIPK3 to induce cell death both by a caspase 8-dependent mechanism and by a separate Bax/Bak- and caspase-independent mechanism. RIPK1 is therefore not essential for TNF to activate RIPK3 to induce necroptosis nor for the formation of a functional ripoptosome/necrosome.
- Published
- 2013
- Full Text
- View/download PDF
22. In mouse embryonic fibroblasts, neither caspase-8 nor cellular FLICE-inhibitory protein (FLIP) is necessary for TNF to activate NF-κB, but caspase-8 is required for TNF to cause cell death, and induction of FLIP by NF-κB is required to prevent it.
- Author
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Moujalled DM, Cook WD, Lluis JM, Khan NR, Ahmed AU, Callus BA, and Vaux DL
- Subjects
- Animals, Apoptosis drug effects, Apoptosis genetics, Blotting, Western, CASP8 and FADD-Like Apoptosis Regulating Protein genetics, Caspase 8 genetics, Cell Death drug effects, Cell Line, Enzyme-Linked Immunosorbent Assay, Fluorescent Antibody Technique, Humans, Immunoprecipitation, Mice, Protein Isoforms genetics, Protein Isoforms metabolism, CASP8 and FADD-Like Apoptosis Regulating Protein metabolism, Caspase 8 metabolism, NF-kappa B metabolism, Tumor Necrosis Factor-alpha pharmacology
- Abstract
Binding of TNF to TNF receptor-1 can give a pro-survival signal through activation of p65/RelA NF-κB, but also signals cell death. To determine the roles of FLICE-inhibitory protein (FLIP) and caspase-8 in TNF-induced activation of NF-κB and apoptosis, we used mouse embryonic fibroblasts derived from FLIP and caspase-8 gene-deleted mice, and treated them with TNF and a smac-mimetic compound that causes degradation of cellular inhibitor of apoptosis proteins (cIAPs). In cells treated with smac mimetic, TNF and Fas Ligand caused wild-type and FLIP(-/-) MEFs to die, whereas caspase-8(-/-) MEFs survived, indicating that caspase-8 is necessary for death of MEFs triggered by these ligands when IAPs are degraded. By contrast, neither caspase-8 nor FLIP was required for TNF to activate p65/RelA NF-κB, because IκB was degraded, p65 translocated to the nucleus, and an NF-κB reporter gene activated normally in caspase-8(-/-) or FLIP(-/-) MEFs. Reconstitution of FLIP(-/-) MEFs with the FLIP isoforms FLIP-L, FLIP-R, or FLIP-p43 protected these cells from dying when treated with TNF or FasL, whether or not cIAPs were depleted. These results show that in MEFs, caspase-8 is necessary for TNF- and FasL-induced death, and FLIP is needed to prevent it, but neither caspase-8 nor FLIP is required for TNF to activate NF-κB.
- Published
- 2012
- Full Text
- View/download PDF
23. IAPs limit activation of RIP kinases by TNF receptor 1 during development.
- Author
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Moulin M, Anderton H, Voss AK, Thomas T, Wong WW, Bankovacki A, Feltham R, Chau D, Cook WD, Silke J, and Vaux DL
- Subjects
- Animals, Female, Gene Deletion, Inhibitor of Apoptosis Proteins genetics, Male, Mice, Receptor-Interacting Protein Serine-Threonine Kinases genetics, Receptors, Tumor Necrosis Factor, Type I genetics, Receptors, Tumor Necrosis Factor, Type II genetics, Receptors, Tumor Necrosis Factor, Type II metabolism, Signal Transduction, Inhibitor of Apoptosis Proteins metabolism, Receptor-Interacting Protein Serine-Threonine Kinases metabolism, Receptors, Tumor Necrosis Factor, Type I metabolism
- Abstract
Inhibitor of apoptosis (IAP) proteins cIAP1, cIAP2, and XIAP (X-linked IAP) regulate apoptosis and cytokine receptor signalling, but their overlapping functions make it difficult to distinguish their individual roles. To do so, we deleted the genes for IAPs separately and in combination. While lack of any one of the IAPs produced no overt phenotype in mice, deletion of cIap1 with cIap2 or Xiap resulted in mid-embryonic lethality. In contrast, Xiap(-/-)cIap2(-/-) mice were viable. The death of cIap2(-/-)cIap1(-/-) double mutants was rescued to birth by deletion of tumour necrosis factor (TNF) receptor 1, but not TNFR2 genes. Remarkably, hemizygosity for receptor-interacting protein kinase 1 (Ripk1) allowed Xiap(-/-)cIap1(-/-) double mutants to survive past birth, and prolonged cIap2(-/-)cIap1(-/-) embryonic survival. Similarly, deletion of Ripk3 was able to rescue the mid-gestation defect of cIap2(-/-)cIap1(-/-) embryos, as these embryos survived to E15.5. cIAPs are therefore required during development to limit activity of RIP kinases in the TNF receptor 1 signalling pathway.
- Published
- 2012
- Full Text
- View/download PDF
24. In vitro enzymatic degradation of poly (glycerol sebacate)-based materials.
- Author
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Liang SL, Yang XY, Fang XY, Cook WD, Thouas GA, and Chen QZ
- Subjects
- Biocompatible Materials, Culture Media, Furans chemistry, Glycerol chemistry, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Microscopy, Electron, Scanning, Decanoates chemistry, Esterases chemistry, Glycerol analogs & derivatives, Polymers chemistry
- Abstract
Enzymatic degradation is a major feature of polyester implants in vivo. An in vitro experimental protocol that can simulate and predict the in vivo enzymatic degradation kinetics of implants is of importance not only to our understanding of the scientific issue, but also to the well-being of animals. In this study, we explored the enzymatic degradation of PGS-based materials in vitro, in tissue culture medium or a buffer solution at the pH optima and under static or cyclic mechanical-loading conditions, in the presence of defined concentrations of an esterase. Surprisingly, it was found that the in vitro enzymatic degradation rates of the PGS-based materials were higher in the tissue culture medium than in the buffered solution at the optimum pH 8. The in vitro enzymatic degradation rate of PGS-based biomaterials crosslinked at 125°C for 2 days was approximately 0.6-0.9 mm/month in tissue culture medium, which falls within the range of in vivo degradation rates (0.2-1.5mm/month) of PGS crosslinked at similar conditions. Enzymatic degradation was also further enhanced in relation to mechanical deformation. Hence, in vitro enzymatic degradation of PGS materials conducted in tissue culture medium under appropriate enzymatic conditions can quantitatively capture the features of in vivo degradation of PGS-based materials and can be used to indicate effective strategies for tuning the degradation rates of this material system prior to animal model testing., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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25. In TNF-stimulated cells, RIPK1 promotes cell survival by stabilizing TRAF2 and cIAP1, which limits induction of non-canonical NF-kappaB and activation of caspase-8.
- Author
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Gentle IE, Wong WW, Evans JM, Bankovacki A, Cook WD, Khan NR, Nachbur U, Rickard J, Anderton H, Moulin M, Lluis JM, Moujalled DM, Silke J, and Vaux DL
- Subjects
- Animals, Caspase 8 genetics, Cell Death drug effects, Cell Death physiology, Cell Survival drug effects, Cell Survival physiology, Cycloheximide pharmacology, Enzyme Activation drug effects, Enzyme Activation physiology, Inhibitor of Apoptosis Proteins genetics, Mice, Mice, Knockout, NF-kappa B genetics, Proteasome Endopeptidase Complex genetics, Proteasome Endopeptidase Complex metabolism, Protein Serine-Threonine Kinases genetics, Protein Serine-Threonine Kinases metabolism, Protein Stability, Protein Synthesis Inhibitors pharmacology, Receptor-Interacting Protein Serine-Threonine Kinases genetics, TNF Receptor-Associated Factor 2 genetics, Tumor Necrosis Factor-alpha pharmacology, NF-kappaB-Inducing Kinase, Caspase 8 metabolism, Inhibitor of Apoptosis Proteins metabolism, NF-kappa B metabolism, Receptor-Interacting Protein Serine-Threonine Kinases metabolism, TNF Receptor-Associated Factor 2 metabolism, Tumor Necrosis Factor-alpha metabolism
- Abstract
RIPK1 is involved in signaling from TNF and TLR family receptors. After receptor ligation, RIPK1 not only modulates activation of both canonical and NIK-dependent NF-κB, but also regulates caspase-8 activation and cell death. Although overexpression of RIPK1 can cause caspase-8-dependent cell death, when RIPK1(-/-) cells are exposed to TNF and low doses of cycloheximide, they die more readily than wild-type cells, indicating RIPK1 has pro-survival as well as pro-apoptotic activities. To determine how RIPK1 promotes cell survival, we compared wild-type and RIPK1(-/-) cells treated with TNF. Although TRAF2 levels remained constant in TNF-treated wild-type cells, TNF stimulation of RIPK1(-/-) cells caused TRAF2 and cIAP1 to be rapidly degraded by the proteasome, which led to an increase in NIK levels. This resulted in processing of p100 NF-κB2 to p52, a decrease in levels of cFLIP(L), and activation of caspase-8, culminating in cell death. Therefore, the pro-survival effect of RIPK1 is mediated by stabilization of TRAF2 and cIAP1.
- Published
- 2011
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26. The mechanical characteristics and in vitro biocompatibility of poly(glycerol sebacate)-bioglass elastomeric composites.
- Author
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Liang SL, Cook WD, Thouas GA, and Chen QZ
- Subjects
- Animals, Biocompatible Materials chemistry, Cell Proliferation drug effects, Ceramics chemistry, Culture Media pharmacology, Decanoates chemistry, Elastic Modulus drug effects, Elastomers chemistry, Elements, Esters, Furans chemistry, Glycerol chemistry, Glycerol pharmacology, Hydrogen-Ion Concentration drug effects, Kinetics, L-Lactate Dehydrogenase metabolism, Mice, Microscopy, Electron, Scanning, Particle Size, Polymers chemistry, Powders, Spectroscopy, Fourier Transform Infrared, Tensile Strength drug effects, Water, Biocompatible Materials pharmacology, Ceramics pharmacology, Decanoates pharmacology, Elastomers pharmacology, Glycerol analogs & derivatives, Materials Testing, Mechanical Phenomena drug effects, Polymers pharmacology
- Abstract
Biodegradable elastomeric materials have gained much recent attention in the field of soft tissue engineering. Poly(glycerol sebacate) (PGS) is one of a new family of elastomers which are promising candidates used for soft tissue engineering. However, PGS has a limited range of mechanical properties and has drawbacks, such as cytotoxicity caused by the acidic degradation products of very soft PGS and degradation kinetics that are too fast in vivo to provide sufficient mechanical support to the tissue. However, the development of PGS/based elastomeric composites containing alkaline bioactive fillers could be a method for addressing these drawbacks and thus may pave the way towards wide clinical applications. In this study, we synthesized a new PGS composite system consisting of a micron-sized Bioglass filler. In addition to much improved cytocompatibility, the PGS/Bioglass composites demonstrated three remarkable mechanical properties. First, contrary to previous reports, the addition of microsized Bioglass increases the elongation at break from 160 to 550%, while enhancing the Young's modulus of the composites by up to a factor of four. Second, the modulus of the PGS/Bioglass composites drops abruptly in a physiological environment (culture medium), and the level of drop can be tuned such that the addition of Bioglass does not harden the composite in vivo and thus the desired compliance required for soft tissue engineering are maintained. Third, after the abrupt drop in modulus, the composites exhibited mechanical stability over an extended period. This latter observation is an important feature of the new composites, because they can provide reliable mechanical support to damaged tissues during the lag phase of the healing process. These mechanical properties, together with improved biocompatibility, make this family of composites better candidates than plastic and related composite biomaterials for the applications of tissue engineering., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2010
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27. TAK1 is required for survival of mouse fibroblasts treated with TRAIL, and does so by NF-kappaB dependent induction of cFLIPL.
- Author
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Lluis JM, Nachbur U, Cook WD, Gentle IE, Moujalled D, Moulin M, Wong WW, Khan N, Chau D, Callus BA, Vince JE, Silke J, and Vaux DL
- Subjects
- Animals, Base Sequence, Caspase 8 metabolism, Cells, Cultured, DNA Primers, Fibroblasts cytology, Mice, Mice, Knockout, Signal Transduction, CASP8 and FADD-Like Apoptosis Regulating Protein biosynthesis, Cell Survival physiology, MAP Kinase Kinase Kinases physiology, NF-kappa B physiology, TNF-Related Apoptosis-Inducing Ligand administration & dosage
- Abstract
Tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) is known as a "death ligand"-a member of the TNF superfamily that binds to receptors bearing death domains. As well as causing apoptosis of certain types of tumor cells, TRAIL can activate both NF-kappaB and JNK signalling pathways. To determine the role of TGF-beta-Activated Kinase-1 (TAK1) in TRAIL signalling, we analyzed the effects of adding TRAIL to mouse embryonic fibroblasts (MEFs) derived from TAK1 conditional knockout mice. TAK1-/- MEFs were significantly more sensitive to killing by TRAIL than wild-type MEFs, and failed to activate NF-kappaB or JNK. Overexpression of IKK2-EE, a constitutive activator of NF-kappaB, protected TAK1-/- MEFs against TRAIL killing, suggesting that TAK1 activation of NF-kappaB is critical for the viability of cells treated with TRAIL. Consistent with this model, TRAIL failed to induce the survival genes cIAP2 and cFlipL in the absence of TAK1, whereas activation of NF-kappaB by IKK2-EE restored the levels of both proteins. Moreover, ectopic expression of cFlipL, but not cIAP2, in TAK1-/- MEFs strongly inhibited TRAIL-induced cell death. These results indicate that cells that survive TRAIL treatment may do so by activation of a TAK1-NF-kappaB pathway that drives expression of cFlipL, and suggest that TAK1 may be a good target for overcoming TRAIL resistance.
- Published
- 2010
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28. Photobleaching of camphorquinone during polymerization of dimethacrylate-based resins.
- Author
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Asmusen S, Arenas G, Cook WD, and Vallo C
- Subjects
- 4-Aminobenzoic Acid chemistry, 4-Aminobenzoic Acid radiation effects, Absorption, Algorithms, Bisphenol A-Glycidyl Methacrylate chemistry, Bisphenol A-Glycidyl Methacrylate radiation effects, Composite Resins radiation effects, Dental Materials radiation effects, Energy Transfer, Humans, Hydrogen chemistry, Hydrogen radiation effects, Light, Materials Testing, Methacrylates radiation effects, Polyethylene Glycols chemistry, Polyethylene Glycols radiation effects, Polymers chemistry, Polymers radiation effects, Polymethacrylic Acids chemistry, Polymethacrylic Acids radiation effects, Polyurethanes chemistry, Polyurethanes radiation effects, Radiation Dosage, Reducing Agents chemistry, Reducing Agents radiation effects, Terpenes chemistry, Time Factors, para-Aminobenzoates, Composite Resins chemistry, Dental Materials chemistry, Methacrylates chemistry, Terpenes radiation effects
- Abstract
Objective: The aim of this study was to compare the photobleaching rate of CQ in different dental resins., Methods: The photodecomposition rate of CQ/amine system in bis-GMA/TEGDMA, bis-EMA and UDMA polymerizing monomers was evaluated at different light intensities. The photobleaching of the CQ was studied by monitoring the decrease in light absorption as a function of continuous irradiation time. The absorption changes were assessed by recording the transmitted light that passed through samples of monomers containing CQ/amine., Results: Complete photobleaching of CQ was observed in all the monomer tested and the rate constant for the photobleaching was proportional to the radiation intensity. Hydrogen abstraction from amines by the excited CQ state via electron transfer and direct hydrogen abstraction from monomer structures were involved in the CQ photoreduction. CQ was photobleached in the absence of coinitiator in a dimethacrylate monomer containing a carbamate functional group (UDMA). This behavior was attributed to the presence of labile hydrogen atoms in the UDMA monomer. The CQ photobleaching rate constant in UDMA containing CQ/amine was similar to that in UDMA in the absence of amine. Moreover, the efficiency of CQ to photoinitiate the polymerization of UDMA in the absence of amine demonstrated that the radicals derived from the UDMA monomer via hydrogen abstraction are highly reactive toward double bonds., Significance: CQ photoinitiates the polymerization of the UDMA monomer in the absence of amine and the efficiency of this process is comparable to that of traditional bis-GMA and bis-EMA monomers activated with CQ/amine.
- Published
- 2009
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29. Identification of an Xiap-like pseudogene on mouse chromosome 7.
- Author
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Kotevski A, Cook WD, Vaux DL, and Callus BA
- Subjects
- Amino Acid Sequence, Animals, Fibroblasts metabolism, Mice, Mice, Inbred C57BL, Mice, Knockout, Models, Genetic, Molecular Sequence Data, Peptides chemistry, Retroelements, Sequence Homology, Amino Acid, Chromosome Mapping, Chromosomes, Pseudogenes, X-Linked Inhibitor of Apoptosis Protein genetics
- Abstract
The most thoroughly characterized mammalian IAP is XIAP/BIRC4, which can inhibit caspases 9, 3 and 7, but may also regulate apoptosis through interactions with other proteins such as Smac/DIABLO, HtrA2/Omi, XAF1, TAK1, cIAP1, and cIAP2.High throughput sequencing of the mouse genome revealed the existence of a gene resembling Xiap/Birc4 on mouse chromosome 7. To confirm the existence of this gene, and to determine its functional significance, we performed Southern and Northern blot analysis. This showed the presence of the Xiap-like gene in both wild-type and Xiap gene knock-out mice, but the corresponding mRNA was not detected in any tissues examined by Northern blot. Analysis of the gene sequence in all three possible reading frames predicts that expression of this gene would not give rise to a full-length protein, but only non-functional truncated polypeptides. Because its nucleotide sequence is 92% identical to Xiap, but it has no introns corresponding to those of Xiap, we conclude that Xiap-ps1 is a pseudogene generated by retro-transposition of a spliced Xiap message to chromosome 7.
- Published
- 2009
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30. Influence of thermal expansion on shrinkage during photopolymerization of dental resins based on bis-GMA/TEGDMA.
- Author
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Mucci V, Arenas G, Duchowicz R, Cook WD, and Vallo C
- Subjects
- Bisphenol A-Glycidyl Methacrylate radiation effects, Calorimetry, Dental Materials radiation effects, Fiber Optic Technology, Humans, Interferometry, Light, Materials Testing, Methacrylates, Models, Chemical, Phase Transition, Polymers chemistry, Polymers radiation effects, Reducing Agents, Spectrophotometry, Ultraviolet, Spectroscopy, Fourier Transform Infrared, Spectroscopy, Near-Infrared, Surface Properties, Temperature, Terpenes chemistry, para-Aminobenzoates, Bisphenol A-Glycidyl Methacrylate chemistry, Composite Resins chemistry, Dental Materials chemistry, Polyethylene Glycols chemistry, Polymethacrylic Acids chemistry
- Abstract
Objective: The aim of this study was to assess volume changes that occur during photopolymerization of unfilled dental resins based on bis-GMA-TEGDMA., Methods: The resins were activated for visible light polymerization by the addition of camphorquinone (CQ) in combination with dimethylamino ethylmethacrylate (DMAEMA) or ethyl-4-dimethyl aminobenzoate (EDMAB). A fibre-optic sensing method based on a Fizeau-type interferometric scheme was employed for monitoring contraction during photopolymerization. Measurements were carried out on 10mm diameter specimens of different thicknesses (1 and 2mm)., Results: The high exothermic nature of the polymerization resulted in volume expansion during the heating, and this effect was more pronounced when the sample thickness increased. Two approaches to assess volume changes due to thermal effects are presented. Due to the difference in thermal expansion coefficients between the rubbery and glassy resins, the increase of volume due to thermal expansion was greater than the decrease in volume due to thermal contraction. As a result, the volume of the vitrified resins was greater than that calculated from polymerization contraction. The observed trends of shrinkage versus sample thickness are explained in terms of light attenuation across the path length during photopolymerization., Significance: Results obtained in this research highlight the inherent interlinking of non-isothermal photopolymerization and volumetric changes in bulk polymerizing systems.
- Published
- 2009
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31. Photopolymerization of N,N-dimethylaminobenzyl alcohol as amine co-initiator for light-cured dental resins.
- Author
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Schroeder WF, Cook WD, and Vallo CI
- Subjects
- Aniline Compounds radiation effects, Benzyl Alcohol radiation effects, Benzyl Alcohols radiation effects, Bisphenol A-Glycidyl Methacrylate chemistry, Bisphenol A-Glycidyl Methacrylate radiation effects, Calorimetry, Differential Scanning, Chalcones chemistry, Chalcones radiation effects, Composite Resins radiation effects, Dimethylamines radiation effects, Humans, Light, Materials Testing, Methacrylates chemistry, Methacrylates radiation effects, Polyethylene Glycols chemistry, Polyethylene Glycols radiation effects, Polymers chemistry, Polymers radiation effects, Polymethacrylic Acids chemistry, Polymethacrylic Acids radiation effects, Reducing Agents radiation effects, Spectrophotometry, Ultraviolet, Spectroscopy, Fourier Transform Infrared, Spectroscopy, Near-Infrared, Terpenes chemistry, Terpenes radiation effects, Aniline Compounds chemistry, Benzyl Alcohol chemistry, Benzyl Alcohols chemistry, Composite Resins chemistry, Dimethylamines chemistry, Reducing Agents chemistry
- Abstract
Objective: The present study was carried out in order to assess the suitability of N,N-dimethylaminobenzyl alcohol (DMOH) as co-initiator of camphorquinone (CQ) and 1-phenyl-1,2-propanedione (PPD) in light-cured dental resins., Methods: DMOH was synthesized and used as co-initiator for the photopolymerization of a model resin based on {2,2-bis[4-(2-hydroxy-3-methacryloxyprop-1-oxy)phenyl]propane} (Bis-GMA)/triethylene glycol dimethacrylate (TEGDMA). Experimental formulations containing CQ or PPD in combination with DMOH at different concentrations were studied. The photopolymerization was carried out by means of a commercial light-emitting diode (LED) curing unit. The evolution of double bonds consumption versus irradiation time was followed by near-infrared spectroscopy (NIR). The photon absorption efficiency (PAE) of the photopolymerization process was calculated from the spectral distribution of the LED unit and the molar absorption coefficient distributions of PPD and CQ., Results: DMOH is an efficient photoreducer of CQ and PPD resulting in higher polymerization rate and higher double bond conversion compared with dimethylaminoethylmethacrylate. The PAE for PPD was higher than that for CQ. However, the polymerization initiated by PPD progressed at a lower rate and exhibited lower values of final conversion compared with the resins containing CQ. This observation indicates that the lower polymerization rate of the PPD/amine system should be explained in terms of the mechanism of generating primary radicals by PPD, which is less efficient compared with CQ., Significance: The DMOH/benzoyl peroxide redox system, has recently been proposed as a more biocompatible accelerator for the polymerization of bone cements based on poly(methyl methacrylate), because cytotoxity tests have demonstrated that DMOH possesses better biocompatibility properties compared with traditional tertiary amines. The results obtained in the present study reveal the suitability of the CQ/DMOH initiator system for the polymerization of light-cured dental composites.
- Published
- 2008
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32. Photoinduced plasticity in cross-linked polymers.
- Author
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Scott TF, Schneider AD, Cook WD, and Bowman CN
- Subjects
- Stress, Mechanical, Temperature, Tensile Strength, 3-Mercaptopropionic Acid analogs & derivatives, 3-Mercaptopropionic Acid chemistry, Cyclooctanes chemistry, Ethers chemistry, Ethylene Glycols chemistry, Light, Polymers chemistry, Propylene Glycols chemistry, Sulfhydryl Compounds chemistry
- Abstract
Chemically cross-linked polymers are inherently limited by stresses that are introduced by post-gelation volume changes during polymerization. It is also difficult to change a cross-linked polymer's shape without a corresponding loss of material properties or substantial stress development. We demonstrate a cross-linked polymer that, upon exposure to light, exhibits stress and/or strain relaxation without any concomitant change in material properties. This result is achieved by introducing radicals via photocleavage of residual photoinitiator in the polymer matrix, which then diffuse via addition-fragmentation chain transfer of midchain functional groups. These processes lead to photoinduced plasticity, actuation, and equilibrium shape changes without residual stress. Such polymeric materials are critical to the development of microdevices, biomaterials, and polymeric coatings.
- Published
- 2005
- Full Text
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33. PU.1 is a suppressor of myeloid leukemia, inactivated in mice by gene deletion and mutation of its DNA binding domain.
- Author
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Cook WD, McCaw BJ, Herring C, John DL, Foote SJ, Nutt SL, and Adams JM
- Subjects
- Animals, Binding Sites genetics, Cell Differentiation genetics, Cell Proliferation, Clone Cells pathology, DNA metabolism, Leukemia, Myeloid etiology, Male, Mice, Proto-Oncogene Proteins chemistry, Trans-Activators chemistry, Tumor Suppressor Proteins genetics, Tumor Suppressor Proteins physiology, Gene Deletion, Leukemia, Myeloid genetics, Point Mutation, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins physiology, Trans-Activators genetics, Trans-Activators physiology
- Abstract
In most myeloid leukemias induced in mice by gamma-radiation, one copy of chromosome 2 has suffered a deletion. To search for a potential tumor suppressor gene in that region, we have delineated the deletions in a panel of these tumors. A commonly deleted region of 2 megabase pairs (Mbp) includes the gene encoding the PU.1 transcription factor, a powerful inducer of granulocytic/monocytic differentiation. Significantly, in 87% of these tumors the remaining PU.1 allele exhibited point mutations in the PU.1 DNA binding domain. Surprisingly, 86% of these mutations altered a single CpG, implicating deamination of deoxycytidine, a common mutational mechanism, as the origin of this lesion. The "hot spot" resides in the codon for a contact residue essential for DNA binding by PU.1. In keeping with a tumor suppressor role for PU.1, enforced expression of wild-type PU.1 in the promyelocytic leukemia cells inhibited their clonogenic growth, induced monocytic differentiation, and elicited apoptosis. The mutant PU.1 found in tumors retained only minimal growth suppressive function. The results suggest that PU.1 normally suppresses development of myeloid leukemia by promoting differentiation and that the combination of gene deletion and a point mutation that impairs its ability to bind DNA is particularly leukemogenic.
- Published
- 2004
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34. Multiple genetic loci modify susceptibility to plasmacytoma-related morbidity in E(mu)-v-abl transgenic mice.
- Author
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Symons RC, Daly MJ, Fridlyand J, Speed TP, Cook WD, Gerondakis S, Harris AW, and Foote SJ
- Subjects
- Algorithms, Animals, Crosses, Genetic, Disease Models, Animal, Female, Genetic Linkage, Genotype, Humans, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Inbred Strains, Mice, Transgenic, Morbidity, Plasmacytoma epidemiology, Plasmacytoma mortality, Survival Analysis, Time Factors, Gene Expression Regulation, Neoplastic physiology, Genes, abl, Genetic Predisposition to Disease, Plasmacytoma genetics
- Abstract
There is a great difference in susceptibility to v-abl transgene-induced plasmacytoma between the BALB/cAn and the relatively resistant C57BL/6J mouse strains. We have used the Mapmaker/SURVIVOR algorithm to analyze genome-wide scans on over 800 transgenic F2 hybrid mice, and have mapped at least six loci on chromosomes 2, 4, 11, 17, and 18 that modify tumor-related morbidity. As in human multiple myeloma, males were found to be more prone to plasmacytomagenesis. Different loci influence tumor susceptibility in male and female mice. Survival in females may be largely controlled by a pair of interacting loci on chromosomes 2 and 17.
- Published
- 2002
- Full Text
- View/download PDF
35. Accommodating haploinsufficient tumor suppressor genes in Knudson's model.
- Author
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Cook WD and McCaw BJ
- Subjects
- Animals, Colonic Neoplasms genetics, Core Binding Factor Alpha 2 Subunit, Cyclin-Dependent Kinase Inhibitor p27, DNA-Binding Proteins genetics, Humans, Models, Genetic, Retinoblastoma genetics, Transcription Factors genetics, Cell Cycle Proteins, Genes, Tumor Suppressor, Microtubule-Associated Proteins genetics, Proto-Oncogene Proteins, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Proteins
- Published
- 2000
- Full Text
- View/download PDF
36. A simple method for the measurement of polymerization shrinkage in dental composites.
- Author
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Cook WD, Forrest M, and Goodwin AA
- Subjects
- Materials Testing instrumentation, Polymers chemistry, Specific Gravity, Composite Resins chemistry, Materials Testing methods
- Abstract
Objective: In this study a simple non-contact method was developed to measure the polymerization shrinkage of dental composites., Methods: A gas pycnometer was used to determine the volumes of specimens prior to and after photopolymerization and from which the total volumetric shrinkage could be determined., Results: Four commercial composites were studied and were found to have polymerization shrinkages varying from 1.6 to 2.5%. The method was found to be labour efficient and produced reproducible results with a standard deviation of approximately 10%., Significance: This method is appropriate for shrinkage measurements where only the total amount shrinkage is required and in particular for the measurement of shrinkage of photocured materials which are sensitive to water absorption.
- Published
- 1999
- Full Text
- View/download PDF
37. Hand knitting, frame knitting and rotary frame knitting in the 17th, 18th and 19th centuries. a question of identification.
- Author
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Cook WD and Tavman-Yilmaz MB
- Subjects
- Clothing economics, Clothing history, Clothing psychology, History, 17th Century, History, 18th Century, History, 19th Century, United Kingdom ethnology, Commerce economics, Commerce education, Commerce history, Commerce legislation & jurisprudence, Textile Industry economics, Textile Industry education, Textile Industry history, Textiles economics, Textiles history, Work economics, Work history, Work legislation & jurisprudence, Work physiology, Work psychology
- Published
- 1999
38. Gene deletion explains both in vivo and in vitro generated chromosome 2 aberrations associated with murine myeloid leukemia.
- Author
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Alexander BJ, Rasko JE, Morahan G, and Cook WD
- Subjects
- Animals, Base Sequence, Gene Deletion, Humans, Karyotyping, Mice, Molecular Sequence Data, Spleen pathology, Tumor Cells, Cultured, Chromosome Aberrations, Leukemia, Myeloid genetics
- Abstract
Ninety-five percent of radiation-induced murine myeloid leukemias contain chromosome 2 aberrations. A dominant molecular defect has not yet been identified: both deletions and breakpoint-specific events have been postulated. We have generated a model in which chromosome 2 lesions have been generated in vitro in a clonal tumor cell line. In this study cytogenetic and molecular comparisons are made between two of these in vitro generated lesions and eight derived in vivo: seven by the conventional radiation protocol, and one by infection with Moloney leukemia virus. All 10 lines consistently exhibited hemizygous loss of an 18 cM region between Hoxd-4 and II-1 alpha, with variable breakpoints at both ends. These results are consistent with deletion of a gene in common rather than breakpoint-specific events, for lesions resulting from all three protocols. This will allow a novel approach to the identification of a putative tumor suppressor gene, ie to describe the biological effect of the in vitro generated deletion, and to clone the gene by complementation. In preparation for this approach, we have further narrowed the region to approximately 6.5 cM by microsatellite mapping of 22 radiation-induced F1 tumors. In addition, we have eliminated the possibility that imprinting ablates expression from the remaining undeleted chromosome.
- Published
- 1995
39. Fracture toughness of water-aged resin composite restorative materials.
- Author
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Indrani DJ, Cook WD, Televantos F, Tyas MJ, and Harcourt JK
- Subjects
- Absorption, Analysis of Variance, Bisphenol A-Glycidyl Methacrylate chemistry, Dental Restoration, Permanent methods, Dental Stress Analysis, Elasticity, Materials Testing, Methacrylates chemistry, Models, Chemical, Polyethylene Glycols chemistry, Polymethacrylic Acids chemistry, Polyurethanes chemistry, Stress, Mechanical, Time Factors, Water chemistry, Composite Resins chemistry
- Abstract
Objectives: The purpose of this study was to assess the effects of aging experimental dimethacrylate resin composites in water at 37 degrees C for periods up to 6 wk by measuring the variations in fracture toughness (K(c)), elastic modulus (E), fracture energy (G(c)), and water sorption., Methods: Six experimental resins were formulated from dimethacrylate resins, and were filled to 86 wt% (ca. 70 vol%) with treated inorganic filler to form six experimental composites. The fracture toughness was determined using a double torsion technique, the elastic modulus was measured in flexure, and the fracture energy was calculated from the fracture toughness and elastic modulus., Results: As a result of aging in water, K(c) and the G(c) increased, and the elastic modulus decreased, but all values approached a plateau near 6 wk. Water sorption also occurred during this period, mainly during the first 2 wk., Significance: Variations in the mechanical properties are interpreted as being due to plasticization of the resin matrix by water, which appears to lower the yield stress and increase in the size of the plastic zone ahead of the crack, thereby causing the observed increase in G(c) and K(c). After approximately 6 wk, no further changes in properties occurred.
- Published
- 1995
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40. Mechanical properties of some polymer materials used for tooth positioners.
- Author
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Collett AR, Cook WD, and West VC
- Subjects
- Butadienes analysis, Butadienes chemistry, Chemical Phenomena, Chemistry, Physical, Cold Temperature, Dental Materials analysis, Elasticity, Glass chemistry, Materials Testing, Methylmethacrylates analysis, Methylmethacrylates chemistry, Polymers analysis, Polyurethanes analysis, Polyurethanes chemistry, Spectrophotometry, Infrared, Stress, Mechanical, Surface Properties, Thermodynamics, Time Factors, Dental Materials chemistry, Hemiterpenes, Orthodontic Appliance Design, Orthodontic Appliances, Pentanes, Polymers chemistry
- Abstract
The chemical composition, thermal behaviour and mechanical properties of three tooth positioner materials, Urethane P1 (P1), White Rubber (WR) and Elastocryl (EL) were investigated. Infra-red spectrophotometry indicated the P1 polyurethane material to be of the polyether type, and EL to be a blend of poly(ethyl methacrylate) and poly(methyl methacrylate) while WR appeared to be filled cis-poly (isoprene) (natural rubber). The glass transition temperature (Tg) for EL was determined as approximately 10 degrees C, and for both P1 and WR the Tg was less than -50 degrees C. The stress relaxation behaviour was assessed in compression by measuring the stress variation with time. The results for all three materials conformed to the superelastic theory of rubber elasticity. EL exhibited both a more rapid rate and higher degree of stress relaxation than did P1 and WR. Recovery from deformation was assessed by compressing cylinders for given periods of time and then measuring the level of reduced residual strain of the material with time. All three materials exhibited significant residual strain (epsilon(t)) over 'clinically relevant' time periods, and the reduced residual strain (epsilon(t)/epsilon(O)) following deformation was greater for EL than P1 or WR. There was some indication that the three materials have some permanent set following deformation. It was concluded that, in considering desirable mechanical properties of tooth positioner materials, EL is the least suitable of the three examined, with none of the materials being ideal.
- Published
- 1994
- Full Text
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41. SCL, the gene implicated in human T-cell leukaemia, is oncogenic in a murine T-lymphocyte cell line.
- Author
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Elwood NJ, Cook WD, Metcalf D, and Begley CG
- Subjects
- Amino Acid Sequence, Animals, Basic Helix-Loop-Helix Transcription Factors, Cell Line, Transformed, Genes, abl, Humans, Mice, Mice, Inbred BALB C, Molecular Sequence Data, T-Cell Acute Lymphocytic Leukemia Protein 1, T-Lymphocytes microbiology, Cell Transformation, Neoplastic, DNA-Binding Proteins genetics, Leukemia, T-Cell genetics, Neoplasms, Experimental etiology, Proto-Oncogene Proteins, Proto-Oncogenes, Transcription Factors
- Abstract
SCL (TAL-1) is implicated in the generation of human T-cell acute lymphoblastic leukaemia. To directly examine the role of this putative oncogene, an SCL retrovirus was constructed and used to infect a v-ABL transformed T-lymphocyte cell line. Thirteen independent SCL-infected and four control cell lines were established and injected subcutaneously into syngeneic mice. Mice injected with SCL-infected clonal cell lines died significantly more rapidly than control animals. By day 200 46% (40/87) of animals injected with SCL-infected cell lines had died due to disseminated transplantable lymphoid tumours. In contrast only 22% of control mice were dead by day 200 (P < 0.0015). Of possible relevance to the enhanced tumourigenesis, some SCL-infected cell lines displayed increased clonogenicity in agar. Increased cell growth was even more striking when ex-vivo tumour-derived cell lines were studied. Thus, SCL can co-operate with v-ABL to hasten T-cell tumourigenesis. This is the first direct evidence demonstrating that SCL can behave as an oncogene.
- Published
- 1993
42. Tumor-associated karyotypic lesions coselected with in vitro macrophage differentiation.
- Author
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Alexander B, Berger R, Day LM, Hogarth PM, Feneziani A, and Cook WD
- Subjects
- Abelson murine leukemia virus, Animals, Azacitidine pharmacology, Biomarkers, Tumor analysis, Bromodeoxyuridine pharmacology, Cell Adhesion, Cell Differentiation, Cell Transformation, Viral genetics, Dexamethasone pharmacology, Hematopoietic Stem Cells drug effects, Hydroxyurea pharmacology, Karyotyping, Leukemia, Experimental etiology, Mice, Selection, Genetic, Thymus Neoplasms pathology, Tumor Cells, Cultured, Chromosome Aberrations, Hematopoietic Stem Cells pathology, Macrophages pathology, Thymus Neoplasms genetics
- Abstract
Several cytogenetic lesions in chromosomes 2, 5, 12, and 16 have been repeatedly coselected with in vitro macrophage differentiation in a clonal murine thymic tumor cell line. Parental-type subclones, which show an extremely immature hemopoietic phenotype, do not carry the aberrations. The frequency of the stable differentiated variants is elevated by 5-azacytidine and bromodeoxyuridine, consistent with chromosome breakage being responsible for the phenotype. The frequency is also raised by dexamethasone. Since variants are 300-3,000-fold more resistant to dexamethasone than parental clones, we interpret this to be largely due to selection. Three of the lesions, on chromosome 2, match those previously described as associated specifically with in vivo-generated murine myeloid tumors, induced by X irradiation and corticosteroid treatment. Several implications follow from these observations. (1) In vitro differentiation in clonal tumor cell lines can be used to select for tumor-associated lesions. This should allow genetic and molecular analysis of the chromosome 2 lesions and of others that may pinpoint genes critical to macrophage differentiation and transformation. (2) Myeloid and lymphoid tumors that occur in response to X irradiation may diverge from a common initiating tumor. (3) The hemopoietic lineage switch phenomenon, previously described by several authors, may be caused by similar or identical chromosome aberrations.
- Published
- 1992
- Full Text
- View/download PDF
43. Mechanical properties of some tooth positioner materials.
- Author
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Collett AR, Cook WD, and West VC
- Subjects
- Materials Testing, Butadienes chemistry, Hemiterpenes, Methylmethacrylates chemistry, Orthodontic Appliances, Pentanes, Polyurethanes chemistry
- Published
- 1991
- Full Text
- View/download PDF
44. Influence of chemical structure on the fracture behaviour of dimethacrylate composite resins.
- Author
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Cook WD and Moopnar M
- Subjects
- Chemical Phenomena, Chemistry, Elasticity, Stress, Mechanical, Acrylates, Composite Resins, Materials Testing, Methacrylates
- Abstract
Previous studies have shown that the fracture resistance of dimethacrylate-based dental composite resins is enhanced by post-curing the matrix. Here, the influence of the chemical nature of the resin matrix is examined by a study of the fracture properties of composite resins formulated from 15 homologous dimethacrylate monomers and filled to 75 wt% with treated silica. The fracture toughness was determined via the double torsion technique and the elastic modulus and flexural strength were measured in flexure. The fracture energy calculated from the fracture toughness and elastic modulus, varied between 60 and 300 J/m2 while the fracture toughness ranged from 0.2 to 2.0 MN/m3/2 and the flexural strength varied from 17 to 111 MPa. The use of a blend of monomers was found to have a synergistic effect on the fracture resistance. Increasing the length of flexible spacer units (methylene or oxyethylene) between the methacrylate groups initially improved the fracture properties; however, beyond a certain length, these properties were impaired.
- Published
- 1990
- Full Text
- View/download PDF
45. Separate elements control DJ and VDJ rearrangement in a transgenic recombination substrate.
- Author
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Ferrier P, Krippl B, Blackwell TK, Furley AJ, Suh H, Winoto A, Cook WD, Hood L, Costantini F, and Alt FW
- Subjects
- Animals, B-Lymphocytes immunology, Base Sequence, Cloning, Molecular, Enhancer Elements, Genetic, Genes, Immunoglobulin, Immunoglobulin Constant Regions genetics, Immunoglobulin Heavy Chains genetics, Mice, Mice, Transgenic, Molecular Sequence Data, Restriction Mapping, T-Lymphocytes immunology, Transcription, Genetic, Gene Rearrangement, beta-Chain T-Cell Antigen Receptor, Receptors, Antigen, T-Cell genetics
- Abstract
We describe transgenic mice that carry an antigen receptor gene minilocus comprised of germline T cell receptor (TCR) beta variable gene elements (V, D and J) linked to an immunoglobulin (Ig) C mu constant region gene with or without a DNA segment containing the Ig heavy chain transcriptional enhancer (E mu). Transgenic constructs lacking the E mu-containing segment did not undergo detectable rearrangement in any tissue of six independent transgenic lines. In contrast, transgenic constructs containing this DNA segment underwent rearrangement at high frequency in lymphoid tissues, but not other tissues, of four independent lines. Analyses of purified B and T cells, as well as B and T cell lines, from transgenic animals demonstrated that the E mu-containing segment within the construct allowed partial TCR gene assembly (D to J) in both B and T cells. However, complete TCR gene rearrangement within the construct (V to DJ) occurred only in T cells. Therefore, we have demonstrated elements that can control two separate aspects of TCR beta VDJ rearrangement within this construct. One lies within the E mu-containing DNA segment and represents a dominant, cis-acting element that initiates lymphoid cell-specific D beta to J beta rearrangement; various considerations suggest this activity may be related to that of the E mu element. The second element provides T cell-specific control of complete (V beta to DJ beta) variable region gene assembly; it correlates in activity with expression of the unrearranged V beta segment.
- Published
- 1990
- Full Text
- View/download PDF
46. Resin-based restorative materials--a review.
- Author
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Cook WD, Beech DR, and Tyas MJ
- Subjects
- Chemical Phenomena, Chemistry, Physical, Esthetics, Dental, Methylmethacrylates, Surface Properties, Composite Resins, Dental Restoration, Permanent
- Published
- 1984
- Full Text
- View/download PDF
47. Cure of resin based restorative materials. I. Self cure resins.
- Author
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Standish PM and Cook WD
- Subjects
- Chemical Phenomena, Chemistry, Physical, Polymers, Rheology, Spectrophotometry, Infrared, Time Factors, Resins, Synthetic
- Published
- 1983
- Full Text
- View/download PDF
48. Dental polyelectrolyte cements. I. Chemistry of the early stages of the setting reaction.
- Author
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Cook WD
- Subjects
- Chemical Phenomena, Chemistry, Electric Conductivity, Glass Ionomer Cements, Hydrogen-Ion Concentration, Polycarboxylate Cement analysis, Spectrophotometry, Infrared, Time Factors, Dental Cements analysis
- Abstract
As part of an investigation of the setting of dental polyelectrolyte cements, the chemistry of a selection of glass ionomer and zinc polycarboxylate cements was studied by pH, conductivity and I.R. measurements. The zinc polycarboxylate cements were found to react at a greater rate than the glass ionomer cements. The effect of reducing the powder/liquid (P/L) ratio is to decrease the surface area available to attack and hence the reaction rate. The basic form of the kinetics appears to be unaffected except for low P/L ratios where there is a deficiency of available metal cations.
- Published
- 1982
- Full Text
- View/download PDF
49. Somatic variants in mouse myeloma and hybridoma cell lines.
- Author
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Yelton DE, Cook WD, and Scharff MD
- Subjects
- Animals, Cell Fusion, Cell Line, Immunoglobulin Heavy Chains genetics, Immunoglobulin Light Chains genetics, Immunoglobulin Variable Region, Mice, Mice, Inbred BALB C, Phenotype, Spleen immunology, Genetic Variation, Hybrid Cells immunology, Multiple Myeloma immunology
- Published
- 1980
50. Polymerization kinetics of resin-based restorative materials.
- Author
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Cook WD and Standish PM
- Subjects
- Cyclic N-Oxides pharmacology, Kinetics, Quinones pharmacology, Viscosity, Benzoquinones, Composite Resins, Dental Restoration, Permanent, Polymers
- Abstract
The kinetics and mechanism of cure of resin-based restorative materials have been investigated by incorporating into commercial materials additional amounts of inhibitor, initiator, and accelerator. The polymerization was monitored by IR spectroscopy, viscosity measurements, and an oscillating rheometer. The rate of initiation of the polymerization was found to be first order with respect to the initiator and accelerator concentration. The inhibitor was found to be responsible for the induction period during which no polymerization occurred. The duration of this period was proportional to the inhibitor concentration. It was also found that the efficiency of the inhibitor affected the difference between the initial and final set times so that with one particularly effective inhibitor a "snap-set" behavior could be obtained.
- Published
- 1983
- Full Text
- View/download PDF
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