49 results on '"Christopher Choi"'
Search Results
2. A Multicenter Evaluation of the Seraph 100 Microbind Affinity Blood Filter for the Treatment of Severe COVID-19
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Stephen A. Chitty, MD, Sarah Mobbs, FNP-BC, Brian S. Rifkin, MD, Steven W. Stogner, MD, Michael S. Lewis, MD, Jaime Betancourt, MD, Jeffrey DellaVolpe, MD, Fadi Abouzahr, MD, Andrew M. Wilhelm, DO, Harold M. Szerlip, MD, Amay Parikh, MD, Robert M. Gaeta, DO, Ian Rivera, MD, Caroline Park, MD, MPH, Benjamin Levi, MD, George L. Anesi, MD, MSCE, MBE, Karl C. Alcover, PhD, Thomas B. Arnold, BA, Jeffrey T. Howard, PhD, Kumar Sharma, MD, Kathleen P. Pratt, PhD, Ian J. Stewart, MD, Kevin K. Chung, MD, for the PURIFY Investigators, Amay Parikh, Sarah Guyler, Harold Szerlip, Giselle Carino, Tanqunisha Coleman, Robert J. Walter, Mai Nguyen, Robert Gaeta, Ian M. Rivera, Ferdinand Bacomo, Sean C. Reilly, Susan D. Rogers, Delia Marshall, Melba Francis, Sholanda Henderson, Bob Ward, Keith McCrea, Erdie de Peralta, Lakhmir S. Chawla, Andrea Worsham, Michael Benjamin, Brian Rifkin, Steven Stogner, Steve Farrell, Karen Brooks, Maria Voelkel, Sophie Haralson, Marianne Spevak, Daniell Clark, Laura Osgood, Qianru Wu, Kevin Grant, Rittal Mehta, Jeffrey Dellavolpe, Fadi Abouzahr, Mohammed Ahmed, Ginger Dowell, Stephen Amerson, Stephen Chitty, Srah Mobbs, Gwen Gratto-Cox, Christy Jordan, George Peoples, Dan Hargrove, Karen Arrington, Lauren Zahra, Jessica Raley, Katie Lyon, Rachel Macomber, Ashlee Richie, Tineka Brown, Laura Richie, Susan Hargrove, Emily Scribe, Steven White, Kevin Chung, Ian Stewart, Kathleen Pratt, Karl Alcover, Thomas B. Arnold, Lauren Walker, Amy Laczek, Breandan Sullivan, Nick Naughton, Sabrina Espinoza, Vikhyat Bebarta, Adit Ginde, Anip Bansal, Ilona Dewald, Isidro Susano Basilio, Andrew Wilhelm, Delia Owens, George L. Anesi, Kumar Sharma, Subrata Debnath, Sean P. Barnett, Nicholas S. Niazi, Jeffrey Howard, Benjamin Levi, Caroline Park, Tamim Hamdi, Peiman Lahsaei, Nilum Rajora, Christopher Choi, Andriy I Batchinsky, Michael Lewis, Jaime Betancourt, Nancy Mohler, Natalia Dudek, Jasmine Bagnas, James Oliver, Stephen Olson, and Jenny Nguyen
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Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
OBJECTIVES:. The Seraph100 Microbind Affinity Blood Filter (Seraph 100) (ExThera Medical, Martinez, CA) is an extracorporeal therapy that can remove pathogens from blood, including severe acute respiratory syndrome coronavirus 2. The aim of this study was to evaluate safety and efficacy of Seraph 100 treatment for COVID-19. DESIGN:. Retrospective cohort study. SETTING:. Nine participating ICUs. PATIENTS:. COVID-19 patients treated with Seraph 100 (n = 53) and control patients matched by study site (n = 53). INTERVENTION:. Treatment with Seraph 100. MEASUREMENTS AND MAIN RESULTS:. At baseline, there were no differences between the groups in terms of sex, race/ethnicity, body mass index, and need for mechanical ventilation. However, patients in the Seraph 100 group were younger (median age, 54 yr; interquartile range [IQR], 41–65) compared with controls (median age, 64 yr; IQR, 56–69; p = 0.009). Charlson comorbidity index scores were lower in the Seraph 100 group (2; IQR, 0–3) compared with the control group (3; IQR, 2–4; p = 0.006). Acute Physiology and Chronic Health Evaluation II scores were also lower in Seraph 100 subjects (12; IQR, 9–17) compared with controls (16; IQR, 12–21; p = 0.011). The Seraph 100 group had higher vasopressor-free days with an incidence rate ratio of 1.30 on univariate analysis. This difference was not significant after adjustment. Seraph 100-treated subjects were less likely to die compared with controls (32.1% vs 64.2%; p = 0.001), a difference that remained significant after adjustment. However, no difference in mortality was observed in a post hoc analysis utilizing an external control group. In the full cohort of 86 treated patients, there were 177 total treatments, in which only three serious adverse events were recorded. CONCLUSIONS:. Although this study did not demonstrate consistently significant clinical benefit across all endpoints and comparisons, the findings suggest that broad spectrum, pathogen agnostic, blood purification can be safely deployed to meet new pathogen threats while awaiting targeted therapies and vaccines.
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- 2022
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3. The spatial overlap of small‐scale cannabis farms with aquatic and terrestrial biodiversity
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Phoebe Parker‐Shames, Christopher Choi, Van Butsic, David Green, Brent Barry, Katie Moriarty, Taal Levi, and Justin S. Brashares
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agricultural frontier ,carnivore richness ,coho salmon (Onchorhynus kisutch) ,fisher (Pekania pennanti) ,land‐use change ,marijuana ,Ecology ,QH540-549.5 ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Abstract The rapid expansion of cannabis agriculture in the Western United States provides a rare opportunity to study how an abrupt change in land‐use policy affects local biodiversity. There is broad speculation that cannabis production on private land is expanding and having negative effects on aquatic and terrestrial ecosystems, yet there exist little empirical data to evaluate this concern. In this study, we mapped and characterized outdoor cannabis production during the first season of legal recreational production (2016) in a large legacy cannabis‐producing region of Southern Oregon, Josephine County. We descriptively compared cannabis farms to all available private parcels based on proximity to rivers/streams and undeveloped land and their overlap with carnivore richness. Using publicly available satellite imagery, we found approximately 1.34 km2 (331 acres) of cannabis cultivation within Josephine County during the first season of legal recreational production. Most cannabis production areas were small (median size 414 m2), spatially clustered at all observed scales, and recently established (67% were not visible in 2013–2014 pre‐legalization). When compared with all available private parcels, cannabis was preferentially located in forested areas, undeveloped land and slightly closer to rivers. Within riparian areas, farms were slightly closer to rivers with predicted occurrence of coho salmon (Oncorhynchus kisutch). While projected carnivore richness was similar between cannabis and all private parcels, projected fisher (Pekania pennanti) occupancy was more than five times higher on cannabis farms, with a median occupancy of 0.69 (interquartile range: 0.24–0.87). Our results establish a baseline for cannabis land cover at the time of early recreational legalization and rapid expansion and can be used to predict future patterns or ecological consequences of cannabis development in other production areas. Understanding the potential ecological impact of cannabis is increasingly important as legalization expands and may also offer insights into other rural land‐use change frontiers.
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- 2022
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4. Effect of Rearing Systems on Growth Performance, Lying/Standing Behavior, Morbidity, and Immunity Parameters of Pre-Weaned Dairy Calves in a Continental Zone in Winter
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Wanying Zhao, Christopher Choi, Lin Ru, Zhengxiang Shi, and Hao Li
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hutch ,barn ,average daily weight gain ,lying time ,morbidity rate ,Agriculture (General) ,S1-972 - Abstract
On dairy farms, calves are typically raised inside barns (either in individual or group pens), or they are raised in outdoor hutches. To evaluate the effect of all three of these commonly used rearing practices on calves, an experiment was conducted. A group of 58 Holstein dairy female healthy calves (3 days of age) was randomly divided into three subgroups (outdoor hutches, individual-housed, and group-housed in a barn). The body weight, lying bouts, lying time, and immunity parameters of each calf were monitored, and the ambient temperature and relative humidity were measured. The average temperatures outside and in the barn and hutches were −16.67 °C, −15.26 °C, and −15.59 °C, respectively, from 22 November 2020 to 27 January 2021. All calves suffered from cold stress. Group-housed calves weighed significantly less than the other calves at the ages of 1 month and 2 month (p < 0.05). The lying time of the calves housed in individual pens and group pens was longer (p < 0.05) than that of the calves housed in hutches. The morbidity attributable to bovine respiratory disease was significantly lower among the calves housed in hutches than it was among the calves housed either individually or in group pens inside the barn (p < 0.05). No significant differences in the concentrations of TNF-α, IL-1β, and IL-6 were found between the three groups (p > 0.05). On the basis of these findings, we were able to conclude that calves housed in outdoor hutches were at a lower risk of developing a disease than were calves housed in barns without heating in winter. To optimize the management process, heating should be added to hutch systems. Moreover, more rigorous disease and environmental control management strategies should be applied when raising calves inside barns.
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- 2022
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5. Effects of Airspeed on the Respiratory Rate, Rectal Temperature, and Immunity Parameters of Dairy Calves Housed Individually in an Axial-Fan-Ventilated Barn
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Wanying Zhao, Christopher Choi, Dapeng Li, Geqi Yan, Hao Li, and Zhengxiang Shi
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rectal temperature ,respiratory rate ,immunity parameters ,airspeed ,calf ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
At many modern dairy farms, calves raised in barns are kept in individual stalls separated by solid partitions, which act as barriers. Ventilation fans blowing air perpendicular to these stalls only provide the optimal airflow to the first few calves, while those further away receive a slower airflow. To ascertain whatever effects different airflow speeds may have on the health of animals kept in stalls located at increasing distances from ventilation fans, we divided a select group of 43 Holstein dairy calves into six subgroups based on age, and each subgroup was subjected to either a specified high-speed or low-speed airflow as follows: (1) Six 3-day-olds received high-speed airflow (D3-HA); (2) Six 3-day-olds received low-speed airflow (D3-LA); (3) Eight 19 (±3)-day-olds received high-speed airflow (D19-HA); (4) Eight 19 (± 3)-day-olds received low-speed airflow (D19-LA); (5) Eight 29 (±3)-day-olds received high-speed airflow (D29-HA); and (6) Seven 29 (±3)-day-olds received medium-speed airflow (D29-MA). These trials show that the rectal temperatures and respiratory rates of D19-LA (39.37 °C; 72.90 breaths/min) were significantly higher than those of D19-HA (39.14 °C; 61.57 breaths/min) (p ≤ 0.05), and those of D29-MA (39.40 °C; 75.52 breaths/min) were significantly higher than those of D29-HA (39.20 °C; 68.41 breaths/min) (p ≤ 0.05). At 33 (±3) days of age, those calves receiving high-speed airflow (p ≤ 0.05) registered significantly higher immunoglobulins A and M than calves receiving low-speed flow. Those calves subjected to a high-speed airflow also registered significantly lower tumor necrosis factor levels than those receiving low-speed flow (p ≤ 0.05). Among the 29 to 43-day-old calves, no significant differences in immunity parameters were found to exist between groups D29-HA and D29-MA. On the basis of these findings, we were able to conclude that in the warm season, when the calves were less than 0.5 months old, low-speed (0.17–0.18 m/s) airflows had no significant effect on calves; when the calves were 1 month old, low-speed airflow (0.20–0.21 m/s) may impair the immune functions; when the calves were 1 to 1.5 months old, the airflow velocity higher than 0.9 m/s can meet the needs of the calf without a negative impact on the calf.
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- 2021
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6. Postoperative Respiratory Failure and Advanced Ventilator Settings
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Christopher Choi, Gretchen Lemmink, and Jose Humanez
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Anesthesiology and Pain Medicine ,General Medicine - Published
- 2023
7. Data from the Arizona (Free-Air CO2 Enrichment) Experiments on Cotton at Ample and Limiting Levels of Water Supply and Nitrogen Fertilization and at various Plant Densities
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Bruce Arnold Kimball, Kelly Thorp, Edward Barnes, Christopher Choi, Thomas Clarke, Paul Colaizzi, Glenn Fitzgerald, Julio Haberland, George Hendrey, Douglas Hunsaker, Michael Kostrzewski, Robert LaMorte, Steven Leavitt, Keith Lewin, Jackson Mauney, John Nagy, Paul Pinter, and Peter Waller
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General Medicine - Abstract
Several cotton experiments have been conducted at the University of Arizona's Maricopa Agricultural Center from which datasets have been obtained documenting cotton responses to elevated CO2 concentrations, water supply, nitrogen fertilizer, and planting density. In particular, these experiments included FACE (free-air CO2 enrichment; CO2, water; 10 treatment-years), AgIIS (Agricultural Irrigation Imaging System, pronounced Ag Eyes; nitrogen fertilizer, water supply; 4 treatment-years), and FISE (FAO-56 Irrigation Scheduling Experiments; irrigation scheduling method, planting density, nitrogen fertilizer; 24 treatment-years). Besides achieving the experimental objectives of determining cotton's response to the several variables, as well as testing remote sensing techniques, the comprehensive datasets are suitable for validating plant growth models because they include weather, soils, management, growth, yield and other data.
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- 2022
8. CON: The Best Induction Agent for the Physiologically Difficult Airway Is Ketamine-Propofol Admixture ('Ketofol')
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Christopher Choi and Kunal Karamchandani
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Anesthesiology and Pain Medicine ,Cardiology and Cardiovascular Medicine - Published
- 2023
9. Mechanistic Insight and Local Structure Evolution of NiPS3 upon Electrochemical Lithiation
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Christopher Choi, David Ashby, You Rao, Elaf Anber, James L. Hart, Danielle Butts, Catrina Wilson, Emily Levin, Mitra Taheri, Maryam Ghazisaeidi, Bruce Dunn, and Vicky Doan-Nguyen
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General Materials Science - Published
- 2022
10. The BlueScreen HC assay to predict the genotoxic potential of fragrance materials
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Yax Thakkar, Kaushal Joshi, Christina Hickey, Joseph Wahler, Brian Wall, Sylvain Etter, Benjamin Smith, Peter Griem, Matthew Tate, Frank Jones, Gladys Oudraogo, Stefan Pfuhler, Christopher Choi, Gary Williams, Helmut Greim, Gerhard Eisenbrand, Wolfgang Dekant, and Anne Marie Api
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Mammals ,Mutagenicity Tests ,Health, Toxicology and Mutagenesis ,Odorants ,Genetics ,Animals ,Biological Assay ,Toxicology ,Genetics (clinical) ,DNA Damage ,Mutagens - Abstract
BlueScreen HC is a mammalian cell-based assay for measuring the genotoxicity and cytotoxicity of chemical compounds and mixtures. The BlueScreen HC assay has been utilized at the Research Institute for Fragrance Materials in a safety assessment program as a screening tool to prioritize fragrance materials for higher-tier testing, as supporting evidence when using a read-across approach, and as evidence to adjust the threshold of toxicological concern. Predictive values for the BlueScreen HC assay were evaluated based on the ability of the assay to predict the outcome of in vitro and in vivo mutagenicity and chromosomal damage genotoxicity assays. A set of 371 fragrance materials was assessed in the BlueScreen HC assay along with existing or newly generated in vitro and in vivo genotoxicity data. Based on a weight-of-evidence approach, the majority of materials in the data set were deemed negative and concluded not to have the potential to be genotoxic, while only a small proportion of materials were determined to show genotoxic effects in these assays. Analysis of the data set showed a combination of high positive agreement but low negative agreement between BlueScreen HC results, in vitro regulatory genotoxicity assays, and higher-tier test results. The BlueScreen HC assay did not generate any false negatives, thereby providing robustness when utilizing it as a high-throughput screening tool to evaluate the large inventory of fragrance materials. From the perspective of protecting public health, it is desirable to have no or minimal false negatives, as a false-negative result may incorrectly indicate the lack of a genotoxicity hazard. However, the assay did have a high percentage of false-positive results, resulting in poor positive predictivity of the in vitro genotoxicity test battery outcome. Overall, the assay generated 100% negative predictivity and 3.9% positive predictivity. In addition to the data set of 371 fragrance materials, 30 natural complex substances were evaluated for BlueScreen HC, Ames, and in vitro micronucleus assay, and a good correlation in all three assays was observed. Overall, while a positive result may have to be further investigated, these findings suggest that the BlueScreen HC assay can be a valuable screening tool to detect the genotoxic potential of fragrance materials and mixtures.
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- 2022
11. The POCUS Consult: How Point of Care Ultrasound Helps Guide Medical Decision Making
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Jake A Rice, Jonathan Brewer, Tyler Speaks, Christopher Choi, Peiman Lahsaei, and Bryan T Romito
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hypotension ,trauma ,respiratory failure ,General Medicine ,Review ,hemodynamics - Abstract
Point of care ultrasound (POCUS) allows for rapid, real-time evaluation of cardiovascular and respiratory pathology. The advent of portable, handheld devices and increased recognition by accrediting bodies of the importance of POCUS in guiding clinical decision making has expanded its use across the hospital setting and within medical training programs. POCUS allows clinicians to begin immediate investigation into their differential diagnoses without waiting for a formal imaging study, enhancing the speed of clinical interpretation. In addition to its diagnostic utility, POCUS can also inform clinicians of patients’ response to interventions when serial exams are obtained. This review examines the role of POCUS in the context of frequently encountered patients and highlights the key clinical questions that can be readily answered by POCUS.
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- 2021
12. Aerial additive manufacturing with multiple autonomous robots
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Ketao Zhang, Pisak Chermprayong, Feng Xiao, Dimos Tzoumanikas, Barrie Dams, Sebastian Kay, Basaran Bahadir Kocer, Alec Burns, Lachlan Orr, Christopher Choi, Durgesh Dattatray Darekar, Wenbin Li, Steven Hirschmann, Valentina Soana, Shamsiah Awang Ngah, Sina Sareh, Ashutosh Choubey, Laura Margheri, Vijay M. Pawar, Richard J. Ball, Chris Williams, Paul Shepherd, Stefan Leutenegger, Robert Stuart-Smith, Mirko Kovac, EPSRC, Engineering & Physical Science Research Council (E, Engineering & Physical Science Research Council (EPSRC), Commission of the European Communities, The Royal Society, and Engineering and Physical Sciences Research Council
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Multidisciplinary ,General Science & Technology ,Printing, Three-Dimensional ,Humans ,General - Abstract
Additive manufacturing methods1–4 using static and mobile robots are being developed for both on-site construction5–8 and off-site prefabrication9,10. Here we introduce a method of additive manufacturing, referred to as aerial additive manufacturing (Aerial-AM), that utilizes a team of aerial robots inspired by natural builders11 such as wasps who use collective building methods12,13. We present a scalable multi-robot three-dimensional (3D) printing and path-planning framework that enables robot tasks and population size to be adapted to variations in print geometry throughout a building mission. The multi-robot manufacturing framework allows for autonomous three-dimensional printing under human supervision, real-time assessment of printed geometry and robot behavioural adaptation. To validate autonomous Aerial-AM based on the framework, we develop BuilDrones for depositing materials during flight and ScanDrones for measuring the print quality, and integrate a generic real-time model-predictive-control scheme with the Aerial-AM robots. In addition, we integrate a dynamically self-aligning delta manipulator with the BuilDrone to further improve the manufacturing accuracy to five millimetres for printing geometry with precise trajectory requirements, and develop four cementitious–polymeric composite mixtures suitable for continuous material deposition. We demonstrate proof-of-concept prints including a cylinder 2.05 metres high consisting of 72 layers of a rapid-curing insulation foam material and a cylinder 0.18 metres high consisting of 28 layers of structural pseudoplastic cementitious material, a light-trail virtual print of a dome-like geometry, and multi-robot simulations. Aerial-AM allows manufacturing in-flight and offers future possibilities for building in unbounded, at-height or hard-to-access locations.
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- 2022
13. Longitudinal analysis of anti-SARS-CoV-2 neutralizing antibody (NAb) titers in vaccinees using a novel giant magnetoresistive (GMR) assay
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Elaine Ng, Christopher Choi, and Shan X. Wang
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Materials Chemistry ,Metals and Alloys ,Electrical and Electronic Engineering ,Condensed Matter Physics ,Instrumentation ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Published
- 2023
14. Computational Fluid Dynamics (CFD) research and application in Agricultural and Biological Engineering.
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Guoqiang Zhang, Christopher Choi, Thomas Bartzanas, In-Bok Lee, and Murat Kacira
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- 2018
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15. Safety and Toxicology of Caprolactams and Caprolactam‐Based Polymers
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Sang‐Tae Kim, Anthony Schatz, and Christopher Choi
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chemistry.chemical_classification ,chemistry.chemical_compound ,chemistry ,Caprolactam ,Organic chemistry ,Polymer - Published
- 2021
16. Safety and Toxicology of Pyrrolidones and Pyrrolidone‐Based Polymers
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Sang‐Tae Kim, Christopher Choi, and Anthony Schatz
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chemistry.chemical_classification ,chemistry ,Organic chemistry ,Polymer - Published
- 2021
17. Non-invasive bedside assessment of microvascular and endothelial health in severe COVID-19 patients: the international HEMOCOVID-19 study
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Lorenzo Cortese, Marta Zanoletti, Laís Bacchin de Oliveira, Miquel Barcelona, Lilian Elisabete Bernardes Delazari, Erin M. Buckley, David R. Busch, Alba Caballer, Verónica Carbajal Robles, Pedro Castro, Ana Lucia Cavallaro Barauna Lima, Sreekanth Cheruku, Luis Chiscano, Christopher Choi, Rickson C. Mesquita, Siddharth Dave, Lígia dos Santos Roceto Ratti, Antonio Luis Eiras Falcão, Cristina Espinal, Sara Fernández, Ricard Ferrer, Francesc Font, Marina García-de-Acilu, Giacomo Grasselli, Guillem Gruartmoner, Amedeo Guzzardella, Umut Karadeniz, Peiman Lahsaei, Gabriela Lívio Emídio, Judith Marin Corral, Ana Matas, Rodrigo Menezes Forti, Abraham Mera, Felix Jerandy Monte De Oca Hernández, Tim Myers, Sara Nogales, DaiWai Olson, Marco Pagliazzi, Melvin Parada Guzmán, Argelia Pérez Pacheco, Puri Pérez Terán, Lucia Picazo, Diana Pineda Vásquez, Andrés Fabian Quiroga Soto, Rosa Maria Quispe Siccha, David Romero, Enrique Santillán Aguayo, Isabel Serra, Raúl Serrano Loyola, Adrian Téllez Santoyo, Leandro Utino Taniguchi, Clara Vilà, M. Weinmann, Alberto Zanella, Jaume Mesquida, and Turgut Durduran
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- 2022
18. A Nonrigid-Body Approach to Mammogram Registration for Comparative Analysis.
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Michael A. Wirth, Christopher Choi, and Andrew Jennings
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- 1998
19. Impact of conditioning regimen on peripheral blood hematopoietic cell transplant
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Timothy B. Winslow, Christopher Choi, George Chen, Austin J. Iovoli, Michael Burns, Philip L. McCarthy, Yali Zhang, Paul K. Wallace, A. Platek, Carrie C Hoefer, Theresa Hahn, Maureen Ross, and Anurag K. Singh
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0301 basic medicine ,medicine.medical_specialty ,CD34 ,Gastroenterology ,Peripheral blood hematopoietic cell transplant ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Retrospective Study ,Total body radiation ,Internal medicine ,medicine ,Progression-free survival ,Neutrophil Engraftment ,business.industry ,Total nucleated dose ,Neutrophil engraftment ,Graft-versus-host-disease ,Retrospective cohort study ,Total body irradiation ,medicine.disease ,Regimen ,030104 developmental biology ,Graft-versus-host disease ,Oncology ,030220 oncology & carcinogenesis ,business - Abstract
AIM To investigate infused hematopoietic cell doses and their interaction with conditioning regimen intensity +/- total body irradiation (TBI) on outcomes after peripheral blood hematopoietic cell transplant (PBHCT). METHODS Our retrospective cohort included 247 patients receiving a first, T-replete, human leukocyte antigen-matched allogeneic PBHCT and treated between 2001 and 2012. Correlations were calculated using the Pearson product-moment correlation coefficient. Overall survival and progression free survival curves were generated using the Kaplan-Meier method and compared using the log-rank test. RESULTS Neutrophil engraftment was significantly faster after reduced intensity TBI based conditioning [reduced intensity conditioning (RIC) + TBI] and > 4 × 106 CD34+ cells/kg infused. A higher total nucleated cell dose led to a higher incidence of grade II-IV acute graft-versus-host disease in the myeloablative + TBI regimen group (P = 0.03), but no significant difference in grade III-IV graft-versus-host disease. A higher total nucleated cell dose was also associated with increased incidence of moderate/severe chronic graft-versus-host disease, regardless of conditioning regimen. Overall and progression-free survival were significantly better in patients with a RIC + TBI regimen and total nucleated cell dose > 8 × 108/kg (3 years, overall survival: 70% vs 38%, P = 0.02, 3 years, progression free survival: 64% vs 38%, P = 0.02). CONCLUSION TBI and conditioning intensity may alter the relationship between infused cell doses and outcomes after PBHCT. Immune cell subsets may predict improved survival after unmanipulated PBHCT.
- Published
- 2019
20. Analysis of mutations in primary and metastatic synovial sarcoma
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Tao Yu, Shinya Tanaka, Carl Morrison, Annie Pao, Akira Kawai, Lei Wei, Y. Eugene Yu, Xiaoling Jiang, Christopher Choi, Wiam Bshara, Sean T. Glenn, Jianmin Wang, Song Liu, Jeffrey M. Conroy, and Zhuo Xing
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0301 basic medicine ,synovial sarcoma ,whole exome sequencing ,Metastasis ,Fusion gene ,03 medical and health sciences ,0302 clinical medicine ,Primary Synovial Sarcoma ,medicine ,metastasis ,Missense mutation ,SS18-SSX ,Exome sequencing ,Metastatic Synovial Sarcoma ,business.industry ,Soft tissue sarcoma ,ADAM 17 ,medicine.disease ,Synovial sarcoma ,3. Good health ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,business ,Research Paper - Abstract
Synovial sarcoma is the most common pediatric non-rhabdomyosarcoma soft tissue sarcoma and accounts for about 8–10% of all soft tissue sarcoma in childhood and adolescence. The presence of a chromosomal translocation-associated SS18-SSX-fusion gene is causally linked to development of primary synovial sarcoma. Metastases occur in approximately 50–70% of synovial sarcoma cases with yet unknown mechanisms, which led to about 70–80% mortality rate in five years. To explore the possibilities to investigate metastatic mechanisms of synovial sarcoma, we carried out the first genome-wide search for potential genetic biomarkers and drivers associated with metastasis by comparative mutational profiling of 18 synovial sarcoma samples isolated from four patients carrying the primary tumors and another four patients carrying the metastatic tumors through whole exome sequencing. Selected from the candidates yielded from this effort, we examined the effect of the multiple missense mutations of ADAM17, which were identified solely in metastatic synovial sarcoma. The mutant alleles as well as the wild-type control were expressed in the mammalian cells harboring the SS18-SSX1 fusion gene. The ADAM17-P729H mutation was shown to enhance cell migration, a phenotype associated with metastasis. Therefore, like ADAM17-P729H, other mutations we identified solely in metastatic synovial sarcoma may also have the potential to serve as an entry point for unraveling the metastatic mechanisms of synovial sarcoma.
- Published
- 2018
21. Mammogram registration using the Cauchy-Navier spline.
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Michael A. Wirth and Christopher Choi
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- 2001
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22. Absence of mutagenic activity in the bacterial reverse mutation assay with pulegone and peppermint oil
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Maodo Malick Diop, Christie L. Harman, Christopher Choi, Cody L Wilson, Sylvain Etter, Heidi Bialk, Xing Han, Michel Aubanel, Gerhard Krammer, Jan Demyttenaere, Sean V. Taylor, Maria Bastaki, Vivian Lu, and Jürgen Schnabel
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0106 biological sciences ,0303 health sciences ,Chemistry ,food and beverages ,01 natural sciences ,Reverse mutation ,law.invention ,Ames test ,03 medical and health sciences ,chemistry.chemical_compound ,law ,lcsh:RA1190-1270 ,Food science ,Pulegone ,Essential oil ,030304 developmental biology ,010606 plant biology & botany ,lcsh:Toxicology. Poisons - Abstract
The essential oil of peppermint and one of its natural constituents, (R)-(+)-pulegone, are approved flavorings added to food worldwide. (R)-(+)-Pulegone and peppermint oil were tested separately in two independent bacterial reverse mutation assays according to Organisation for Economic Co-operation and Development Guideline 471. Both flavorings did not produce any evidence of mutagenicity up to cytotoxic concentrations in either the presence or the absence of exogenous metabolic activation.
- Published
- 2020
23. Cardiopulmonary Resuscitation in Intensive Care Unit Patients With Coronavirus Disease 2019
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Vikram Anand, Corey D. Kershaw, Caroline Park, Kristina L. Goff, Sreekanth Cheruku, Siddharth Dave, Callie Gittemeier Ebeling, Christopher Choi, Kim Styrvoky, and Leah Cohen
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medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Critical Care ,medicine.medical_treatment ,education ,Pneumonia, Viral ,coronavirus ,Disease ,Article ,law.invention ,Workflow ,Betacoronavirus ,law ,Extracorporeal membrane oxygenation ,Medicine ,Humans ,In patient ,personal protection equipment ,Cardiopulmonary resuscitation ,Intensive care medicine ,Personal protective equipment ,Pandemics ,business.industry ,SARS-CoV-2 ,pandemic ,Do not resuscitate ,COVID-19 ,Intensive care unit ,Cardiopulmonary Resuscitation ,do-not-resuscitate ,Heart Arrest ,Intensive Care Units ,Anesthesiology and Pain Medicine ,mechanical compression machine ,Cardiology and Cardiovascular Medicine ,business ,Coronavirus Infections - Abstract
Cardiopulmonary resuscitation (CPR) in patients with severe acute respiratory syndrome coronavirus-2-associated disease (coronavirus disease 2019) poses a unique challenge to health- care providers due to the risk of viral aerosolization and disease transmission. This has caused some centers to modify existing CPR procedures, limit the duration of CPR, or consider avoiding CPR altogether. In this review, the authors propose a procedure for CPR in the intensive care unit that minimizes the number of personnel in the immediate vicinity of the patient and conserves the use of scarce personal protective equipment. Highlighting the low likelihood of successful resuscitation in high-risk patients may prompt patients to decline CPR. The authors recommend the preemptive placement of central venous lines in high-risk patients with intravenous tubing extensions that allow for medication delivery from outside the patients' rooms. During CPR, this practice can be used to deliver critical medications without delay. The use of a mechanical compression system for CPR further reduces the risk of infectious exposure to health- care providers. Extracorporeal membrane oxygenation should be reserved for patients with few comorbidities and a single failing organ system. Reliable teleconferencing tools are essential to facilitate communication between providers inside and outside the patients' rooms. General principles regarding the ethics and peri-resuscitative management of coronavirus 2019 patients also are discussed.
- Published
- 2020
24. BPX-501 T cells interfere with minimal residual disease evaluation of B-cell acute lymphoblastic leukemia
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Maureen Ross, Theresa Hahn, Vince O'Neill, George Chen, Paul K. Wallace, Angela Kader, Christopher Choi, Christine M. Ho, Sophia R. Balderman, Philip L. McCarthy, Amro Elshoury, and Michael J. Borowitz
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0301 basic medicine ,Transplantation ,medicine.diagnostic_test ,business.industry ,medicine.medical_treatment ,Hematology ,B-cell acute lymphoblastic leukemia ,Immunotherapy ,medicine.disease ,Minimal residual disease ,Flow cytometry ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Text mining ,Cell culture ,030220 oncology & carcinogenesis ,medicine ,Cancer research ,Neoplasm ,Young adult ,business - Published
- 2018
25. Metabolic Regulation of Longevity by One-Carbon Metabolism and Flavin-Containing Monooxygenase
- Author
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Christopher Choi, Scott F. Leiser, Charles R. Evans, and Daniel A. Beard
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One-carbon metabolism ,Health (social science) ,Chemistry ,media_common.quotation_subject ,Longevity ,Flavin-containing monooxygenase ,Health Professions (miscellaneous) ,Abstracts ,Session 2876 (Poster) ,Metabolism ,Metabolic regulation ,Biochemistry ,Life-span and Life-course Studies ,AcademicSubjects/SOC02600 ,media_common - Abstract
Nematode flavin-containing monooxygenase-2 (fmo-2) is induced by dietary restriction and hypoxia, and is required for the longevity and health benefits of these pathways. It is also sufficient to confer these benefits when overexpressed. As FMOs are well-conserved across taxa, the fmo-2 mechanism has high translational potential. To determine the changes that occur following fmo-2 induction, we performed RNA-seq and untargeted metabolomics analyses. Our data reveal that one-carbon metabolism (OCM) is significantly altered by fmo-2 overexpression. OCM is a nexus for essential metabolic pathways, including transmethylation, transsulfuration, nucleotide synthesis, and amino acid metabolism. We hypothesized that fmo-2 confers longevity benefits by altering key metabolic processes within or downstream of OCM. To test this, we asked whether fmo-2 and OCM interact to regulate longevity by knocking down expression of genes involved with OCM and measuring lifespan and oxidative stress resistance. To understand the biological implications of these interactions, we generated a computational model using qPCR data of key OCM-related genes to predict changes in OCM metabolic flux. Our model predicts significant changes in OCM flux that are regulated by fmo-2 expression levels and are consistent with our RNAi and multi-omics results. We are now testing this model by knocking down genes downstream of OCM to determine their role in fmo-2-mediated benefits. Preliminary results support our hypothesis that changes in metabolic flux through OCM are involved downstream of fmo-2 expression, and may also implicate the UPRER in this pathway. Our future work will elucidate this mechanism and link stress perception and fmo-2-mediated longevity.
- Published
- 2020
26. A Metabolic Stress Response
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Ajay Bhat, Scott F. Leiser, Charles R. Evans, and Christopher Choi
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Abstracts ,Session 2876 (Poster) ,medicine.medical_specialty ,Metabolism ,Health (social science) ,Endocrinology ,Metabolic Stress Response ,Internal medicine ,medicine ,Biology ,AcademicSubjects/SOC02600 ,Life-span and Life-course Studies ,Health Professions (miscellaneous) - Abstract
An organism’s ability to respond to stress is crucial for long-term survival. These stress responses are coordinated by distinct but overlapping pathways, many of which have been found to also regulate longevity in multiple organisms across species. Despite extensive effort, our understanding of these pathways and how they affect aging remains incomplete and thus is a key area of study in Geroscience. Our previous work identified flavin-containing monooxygenase-2 (fmo-2) as a key longevity-promoting gene downstream of at least three longevity promoting pathways, including the hypoxic response, the pentose phosphate pathway, and the dietary restriction pathway. Based on the commonalities of these pathways, we hypothesized that fmo-2, a classically annotated xenobiotic enzyme, might play a key endogenous role in responding to metabolic stress. Our resulting data, using metabolic profiling and further epistatic analysis, both support this hypothesis and link fmo-2’s mechanism to modifications to one-carbon metabolism (OCM), a key intermediate pathway between the nucleotide metabolism, methylation, and transsulfuration pathways. Using mathematical modeling and a novel metabolomics approach, we were able to further identify the likely mechanism of fmo-2-mediated metabolic effects, and connect them to both OCM and downstream components. We propose a model whereby nematode fmo-2 represents a class of enzymes that are able to modify large aspects of metabolism, similar to how transcription factors modify gene expression, and that fmo-2 is a key member of a conserved metabolic stress response.
- Published
- 2020
27. Virtual Surgical Planning for Orthognathic Surgery Using Digital Data Transfer and an Intraoral Fiducial Marker: The Charlotte Method
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S.L. Bobek, Katie Weimer, Bart C. Farrell, Myron R. Tucker, Christopher Choi, and Brian B. Farrell
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Male ,medicine.medical_treatment ,Osteotomy, Sagittal Split Ramus ,Population ,Mandibular Osteotomy ,Orthognathic surgery ,Dentistry ,Surgical planning ,Patient Care Planning ,Cohort Studies ,Occlusal Splints ,User-Computer Interface ,Fiducial Markers ,Image Processing, Computer-Assisted ,Photography ,medicine ,Humans ,Osteotomy, Le Fort ,Maxillary Osteotomy ,education ,Retrospective Studies ,Orthodontics ,education.field_of_study ,Orthognathic Surgical Procedures ,business.industry ,Lasers ,Cone-Beam Computed Tomography ,Models, Dental ,Sagittal plane ,Splints ,Treatment Outcome ,medicine.anatomical_structure ,Surgery, Computer-Assisted ,Otorhinolaryngology ,Jaw Relation Record ,Coronal plane ,Computer-Aided Design ,Female ,Surgery ,Oral Surgery ,business ,Fiducial marker ,Follow-Up Studies - Abstract
Purpose We describe an alternative workup protocol for virtual surgical planning of orthognathic surgery using an intraoral fiducial marker, clinical photography, and the digital transfer of occlusal data. We also discuss our initial experience using this protocol in a series of patients. Patients and Methods A retrospective cohort study was performed of consecutive patients who had undergone combined maxillary and mandibular osteotomies for the correction of dentofacial deformities at 1 center. These patients underwent treatment planning using the modified virtual surgical planning protocol described in the present report. The primary outcome evaluated was the accuracy of the method, which was determined through superimposition of the surgical plan to the postoperative cone-beam computed tomography (CBCT) scan. The secondary outcomes included the accuracy of the natural head position readings and the adequacy of the CBCT scanned stone models for the fabrication of occlusal splints. Results The population included 25 patients. The root mean standard deviation (RMSD) from the preoperative plan to the postoperative scan at the maxillary cephalometric points was 1.2, 1.4, and 2.1 mm in the axial, sagittal, and coronal planes, respectively. The RMSD of the superimposed plan to the postoperative scan at the 3 mandibular cephalometric points was 1.2, 0.8, and 0.7 mm in the axial, sagittal, and coronal planes, respectively. The average variance from the axial, sagittal, and coronal planes for the natural head position was 0.05, 2.22, and 0.69 mm, respectively. All splints fabricated from the CBCT occlusal data fit the stone models and were used intraoperatively. In the subset of patients whose models were both digitally transferred and laser scanned, the superimposition of the laser scan data to the CBCT scanned data was found to have a maximum variation of 0.2 mm at the occlusal level. Conclusions The use of an intraoral fiducial marker changed the workflow for the data collection needed for virtual surgical planning of the correction of dentofacial deformities, while still obtaining accurate results. Because the device does not cause lip distortion, the possibility of virtually predicting a more expectant postoperative lip position exists without the need for additional scans. Furthermore, this work flow allows the transfer of data to be isolated to digital media.
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- 2015
28. Maxillary Surgery
- Author
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Christopher Choi, Brian B. Farrell, and Myron R. Tucker
- Published
- 2015
29. Sinus Lift Grafting
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Dale J. Misek and Christopher Choi
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Implant placement ,medicine.medical_specialty ,Bone graft failure ,business.industry ,Grafting (decision trees) ,medicine ,Sinus perforation ,Sinus lift ,Dentistry ,business ,Posterior maxilla ,Surgery - Published
- 2015
30. Acetone promoted 1,4-migration of an alkoxycarbonyl group on a syn-1,2-diamine
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Shu-Yuan Cheng, Christopher Choi, Anne-Marie Sapse, Manuel M. Paz, Brooke Nielsen, Tanya Napolitano, Elise Champeil, and William Aguilar
- Subjects
010405 organic chemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,Article ,0104 chemical sciences ,chemistry.chemical_compound ,Covalent bond ,Diamine ,Drug Discovery ,Acetone ,Organic chemistry ,Isomerization - Abstract
A 2-protected cis-amino mitosene undergoes an irreversible acetone promoted isomerization and converts to the 1-isomer. Kinetic studies and DFT calculations of the reaction are reported. An organocatalytic mechanism is proposed, involving a covalent intermediate formed by reaction of the mitosene and acetone.
- Published
- 2017
31. Color Fine-Tuning of Optical Materials Through Rational Design
- Author
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Felix Plasser, Christopher Choi, Johannes Fröhlich, Brigitte Holzer, Berthold Stöger, Daniel Lumpi, Youngwan Kim, Johannes Bintinger, Ernst Horkel, Martina Marchetti-Deschmann, Ioannis Kymissis, and Christian Hametner
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Fine-tuning ,Permutation (music) ,Materials science ,business.industry ,Rational design ,Nanotechnology ,02 engineering and technology ,Modular design ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Acceptor ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Chemical-mechanical planarization ,OLED ,Molecule ,Optoelectronics ,Physical and Theoretical Chemistry ,0210 nano-technology ,business - Abstract
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim We report on the feasibility for color fine-tuning of optical materials using rational design principles based on chemical reasoning. For this purpose, a modular framework for the construction of symmetrical cap-linker-cap compounds, using triarylamine caps and oligothiophene linkers, is applied. The chosen structural scaffolds are heavily used in recent industrial applications and provide five possibilities for altering their electronic and steric properties: electron donor/acceptor groups, planarization/deplanarization, and modulation of the π-conjugation length. Permutation of the used building blocks leads to a set of 54 different molecules, out of which 32 are synthesized and characterized in solution as well as in example fabricated OLED devices. This setup allows for color fine-tuning in the range of 412 nm to 540 nm with typical steps of 4 nm. In addition, to further benefit from the large experimental data set the spectroscopic results are used to benchmark quantum chemical computations, which show excellent agreement thus highlighting the potential of these calculations to guide future syntheses.
- Published
- 2016
32. Extraction Site (Socket) Preservation
- Author
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Dale J. Misiek, Ray Lim, and Christopher Choi
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Orthodontics ,Socket preservation ,business.industry ,Extraction site ,Medicine ,Dentistry ,business - Published
- 2015
33. Extraction Socket Grafting and Buccal Wall Regeneration with Recombinant Human Bone Morphogenetic Protein-2 and Acellular Collagen Sponge
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Daniel B. Spagnoli and Christopher Choi
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Bone Regeneration ,Alveolar Bone Loss ,Bone Morphogenetic Protein 2 ,Human bone ,Bone morphogenetic protein ,law.invention ,Transforming Growth Factor beta ,law ,Humans ,Medicine ,Tooth Socket ,Drug Carriers ,Socket preservation ,business.industry ,Regeneration (biology) ,Dental Implantation, Endosseous ,Extraction (chemistry) ,Buccal administration ,Anatomy ,Grafting ,Recombinant Proteins ,Cell biology ,Guided Tissue Regeneration, Periodontal ,Recombinant DNA ,Surgery ,Bone Remodeling ,Collagen ,Oral Surgery ,business - Published
- 2013
34. Gene therapy for adenosine deaminase–deficient severe combined immune deficiency: clinical comparison of retroviral vectors and treatment plans
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Fabio Candotti, Kit L. Shaw, Linda Muul, Denise Carbonaro, Robert Sokolic, Christopher Choi, Shepherd H. Schurman, Elizabeth Garabedian, Chimene Kesserwan, G. Jayashree Jagadeesh, Pei-Yu Fu, Eric Gschweng, Aaron Cooper, John F. Tisdale, Kenneth I. Weinberg, Gay M. Crooks, Neena Kapoor, Ami Shah, Hisham Abdel-Azim, Xiao-Jin Yu, Monika Smogorzewska, Alan S. Wayne, Howard M. Rosenblatt, Carla M. Davis, Celine Hanson, Radha G. Rishi, Xiaoyan Wang, David Gjertson, Otto O. Yang, Arumugam Balamurugan, Gerhard Bauer, Joanna A. Ireland, Barbara C. Engel, Gregory M. Podsakoff, Michael S. Hershfield, R. Michael Blaese, Robertson Parkman, and Donald B. Kohn
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Male ,Transplantation Conditioning ,Adenosine Deaminase ,medicine.medical_treatment ,Genetic enhancement ,Genetic Vectors ,Immunology ,Plenary Paper ,Hematopoietic stem cell transplantation ,Biochemistry ,Adenosine deaminase ,Agammaglobulinemia ,medicine ,Animals ,Humans ,Bone Marrow Transplantation ,Severe combined immunodeficiency ,biology ,business.industry ,Hematopoietic Stem Cell Transplantation ,nutritional and metabolic diseases ,Genetic Therapy ,Cell Biology ,Hematology ,Enzyme replacement therapy ,medicine.disease ,medicine.anatomical_structure ,biology.protein ,Female ,Severe Combined Immunodeficiency ,Bone marrow ,business ,Busulfan ,medicine.drug - Abstract
We conducted a gene therapy trial in 10 patients with adenosine deaminase (ADA)–deficient severe combined immunodeficiency using 2 slightly different retroviral vectors for the transduction of patients' bone marrow CD34+ cells. Four subjects were treated without pretransplantation cytoreduction and remained on ADA enzyme-replacement therapy (ERT) throughout the procedure. Only transient (months), low-level (< 0.01%) gene marking was observed in PBMCs of 2 older subjects (15 and 20 years of age), whereas some gene marking of PBMC has persisted for the past 9 years in 2 younger subjects (4 and 6 years). Six additional subjects were treated using the same gene transfer protocol, but after withdrawal of ERT and administration of low-dose busulfan (65-90 mg/m2). Three of these remain well, off ERT (5, 4, and 3 years postprocedure), with gene marking in PBMC of 1%-10%, and ADA enzyme expression in PBMC near or in the normal range. Two subjects were restarted on ERT because of poor gene marking and immune recovery, and one had a subsequent allogeneic hematopoietic stem cell transplantation. These studies directly demonstrate the importance of providing nonmyeloablative pretransplantation conditioning to achieve therapeutic benefits with gene therapy for ADA-deficient severe combined immunodeficiency.
- Published
- 2012
35. An ultra thin implantable system for cerebral blood volume monitoring using flexible OLED and OPD
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Amrita Masurkar, Andy G. S. Daniel, Youngwan Kim, Ioannis Kymissis, Hongtao Ma, En-Chen Chen, Christopher Choi, and Theodore H. Schwartz
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Materials science ,Heartbeat ,business.industry ,Photodetector ,Substrate (electronics) ,chemistry.chemical_compound ,Cerebral blood volume ,Parylene ,chemistry ,OLED ,Optoelectronics ,business ,Biosensor ,Biomedical engineering - Abstract
An ultra thin implantable system using flexible organic light emitting diodes (OLEDs) and organic photodetectors (OPDs) on parylene substrate shows biocompatibility and high conformability on any surface. This system was used to monitor variations in cerebral blood volume (CBV) corresponding to an epileptic seizure, along with baseline signals such as heartbeat, respiration and slow sinusoidal hemodynamic oscillations (SSHOs). As such, this system shows strong potential for implantable and/or wearable biosensors for continuous health monitoring.
- Published
- 2015
36. Removing Market Barriers to Green Development: Principles and Action Projects to Promote Widespread Adoption of Green Development Practices
- Author
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Christopher Choi
- Subjects
Urban Studies ,Engineering ,Action (philosophy) ,business.industry ,Geography, Planning and Development ,Environmental resource management ,Green development ,Market barriers ,Management, Monitoring, Policy and Law ,business ,Industrial organization ,Nature and Landscape Conservation - Abstract
This paper examines how the market may intentionally or unintentionally create barriers to green development practices. It also offers ideas and recommendations for those who build, finance, and ar...
- Published
- 2009
37. Peripheral Giant Cell Granuloma Associated With Hyperparathyroidism Secondary to End-Stage Renal Disease: A Case Report
- Author
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Ronald E. Schneider, Edward C. Terzian, Denise A. Trochesset, and Christopher Choi
- Subjects
Adult ,Male ,Hyperparathyroidism ,Pathology ,medicine.medical_specialty ,business.industry ,medicine.disease ,Giant Cell Granuloma ,End stage renal disease ,Peripheral giant-cell granuloma ,Otorhinolaryngology ,Granuloma, Giant Cell ,Granuloma ,Gingival Diseases ,medicine ,Humans ,Kidney Failure, Chronic ,Chronic renal failure ,Hyperparathyroidism, Secondary ,Surgery ,Oral Surgery ,business ,Kidney disease - Published
- 2008
38. Investigation of gas emissions and spreading inside and outside of a naturally ventilated poultry house using a 3D CFD model
- Author
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Fernando Rojano, Pierre-Emmanuel Bournet, Paul Robin, Mélynda Hassouna, Christopher Choi, Murat Kacira, Unité de Recherche Environnement Physique de la plante Horticole (EPHOR), Université d'Angers (UA)-AGROCAMPUS OUEST, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Sol Agro et hydrosystème Spatialisation (SAS), Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, Agricultural and Biosystems Engineering, and University of Arizona
- Subjects
Klimamodellierung ,poultry house ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,Gasausbreitung ,[SDV]Life Sciences [q-bio] ,gas dispersion Schlüsselwörter: Geflügelstall ,gas dispersion ,climate modelling ,[SDV.SA.HORT]Life Sciences [q-bio]/Agricultural sciences/Horticulture - Abstract
International audience; Mithilfe der numerischen Strömungsmechanik (Computational Fluid Dynamics; CFD) untersuchten wir die Ausbreitung von Gasen in und um einen Geflügelstall. Ein 3D- CFD-Modell berücksichtigt die natürliche Belüftung in Kombination mit von den Tieren erzeugten Wärme und Wasserdampf. Um dieses 3-D-CFD-Modell zu validieren, wurden während eines Produktionszyklus in einem Betrieb im Westfrankreichs im Frühjahr 2014 Daten erhoben. Zunächst erfolgte die Überprüfung des dreidimensionalen CFD-Modells auf der Basis des Raumklimas. In der zweiten Stufe sollte die Verteilung der Gase in der Umgebung untersucht werden. Dazu wurde der Wasserdampf räumlich und zeitlich genau im Gebäudeinnenbereich registriert, um die Fahnenentwicklung in der Umgebung des Gebäudes vorherzusagen.; Using Computational Fluid Dynamics (CFD), we investigated the spread of gases inside and around of a poultry house. A 3D CFD model takes account of the natural ventilation combined with heat and water vapour produced by the animals. In order to validate a 3D CFD model a cycle of production for experimental purposes located West of France during the spring, 2014 was used to retrieve data. In the first step, there is a validation of a 3D CFD model based on the interior climate. In the second step, the aim was to identify how the gases might be dispersed in the surrounding environment. Water vapour was accurately logged in space and time for the interior of the building, and then utilized to predict the plume development in the building’s surroundings.
- Published
- 2015
39. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans
- Author
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Mehran Taherian, Debra Bradbury, Emmanouil T. Dermitzakis, Manuel A. Rivas, Deborah C. Mash, Ayellet V. Segrè, Luan Lin, Ping Guan, Kimberly Ramsey, Mary Barcus, Deborah Colantuoni, Xiaoquan Wen, Julian Maller, Ferran Reverter, Laura A. Siminoff, Bryan Gillard, Dana R. Valley, Gen Li, Jeffery P. Struewing, Philip A. Branton, Roderic Guigó, Nancy Roche, Charles Shive, Christopher Choi, Johnell Fleming, Timothée Flutre, Latarsha J. Carithers, Taylor Young, Anuar Konkashbaev, Matthew Stephens, Daniel G. MacArthur, Rick Hasz, Mark I. McCarthy, Joel N. Hirschhorn, Sara Mostafavi, Lucas D. Ward, Amanda Brown, Ki Sung Um, Manolis Kellis, Robin Burges, Eric R. Gamazon, Heather M. Traino, Gary F. Temple, Karna Robinson, Leslie H. Sobin, Daphne Koller, Halit Ongen, Bernadette Mestichelli, John T. Lonsdale, Kimberly M. Valentino, Ellen Gelfand, David Tabor, Taru Tukiainen, Mike Salvatore, Gary Walters, Susan L. Sullivan, Jason Bridge, Carolyn C. Compton, Kenneth W. Hambright, Joy T. Boyer, Bin Zhang, Anita H. Undale, Michael Sammeth, Helen M. Moore, Nancy J. Cox, Andrey A. Shabalin, Kenyon Erickson, Nicole C. Lockhart, Gad Getz, Pushpa Hariharan, Benjamin Iriarte, Jakob M. Goldmann, Pouya Kheradpour, John Syron, Jimmie B. Vaught, Jun Zhu, Hae Kyung Im, Jean Monlong, John Seleski, Marta Melé, Edmund Lo, Yvonne Marcus, Pedro G. Ferreira, Stephen A. Buia, Liqun Qi, Greg E. Korzeniewski, Michael T. Moser, Ivan Rusyn, Andrew B. Nobel, Casandra A. Trowbridge, Timothy J. Sullivan, Chunrong Lu, Barbara A. Foster, Laura Barker, Jun Liu, Shenpei Wu, Anna M. Smith, Joanne P. Demchok, Dan L. Nicolae, Jeffrey A. Thomas, Jonathan K. Pritchard, Sherilyn Sawyer, Fred A. Wright, Wendy Winckler, Angela Britton, Zhidong Tu, Jorge Tejada, David S. DeLuca, Yi-Hui Zhou, Roger Little, Jeffrey McLean, Simona Volpi, Tõnu Esko, Kristin G. Ardlie, Monkol Lek, Daniel C. Rohrer, Susan E. Koester, Harold Magazine, Mark Miklos, Quan Long, Jialiang Yang, Cameron D. Palmer, Maghboeba Mosavel, Scott D. Jewell, Tuuli Lappalainen, Alexis Battle, Ellen Karasik, Margaret J. Basile, Saboor Shad, Denee Tidwell, Yan Meng, Chana A. Rabiner, Tao Huang, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro), NIH, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
- Subjects
RNA, Untranslated ,Genotype ,RNA Splicing ,[SDV]Life Sciences [q-bio] ,Quantitative Trait Loci ,Blood Pressure ,Pilot Projects ,Quantitative trait locus ,Biology ,Expression quantitative trait loci ,eQTL ,Article ,Human disease ,Genotype-Tissue Expression ,Genetic variation ,Humans ,Disease ,Gene Regulatory Networks ,Alleles ,Biomedicine ,Genetics ,Regulation of gene expression ,Multidisciplinary ,Genome, Human ,Sequence Analysis, RNA ,business.industry ,GTPase-Activating Proteins ,Genetic Variation ,Tibial Arteries ,Gene Expression Regulation ,Organ Specificity ,Multigene Family ,Transcriptome ,business ,Genome-Wide Association Study - Abstract
UMR AGAP - équipe DAAV (Diversité, adaptation et amélioration de la vigne)139 auteurs : Ardlie KG, Deluca DS, Segrè AV, Sullivan TJ, Young TR, Gelfand ET, Trowbridge CA, Maller JB, Tukiainen T, Lek M, Ward LD, Kheradpour P, Iriarte B, Meng Y, Palmer CD, Esko T, Winckler W, Hirschhorn JN, Kellis M, MacArthur DG, Getz G, Shabalin AA, Li G, Zhou YH, Nobel AB, Rusyn I, Wright FA, Lappalainen T, Ferreira PG, Ongen H, Rivas MA, Battle A, Mostafavi S, Monlong J, Sammeth M, Melé M, Reverter F, Goldmann JM, Koller D, Guigó R, McCarthy MI, Dermitzakis ET, Gamazon ER, Im HK, Konkashbaev A, Nicolae DL, Cox NJ, Flutre T, Wen X, Stephens M, Pritchard JK, Tu Z, Zhang B, Huang T, Long Q, Lin L, Yang J, Zhu J, Liu J, Brown A, Mestichelli B, Tidwell D, Lo E, Salvatore M, Shad S, Thomas JA, Lonsdale JT, Moser MT, Gillard BM, Karasik E, Ramsey K, Choi C, Foster BA, Syron J, Fleming J, Magazine H, Hasz R, Walters GD, Bridge JP, Miklos M, Sullivan S, Barker LK, Traino HM, Mosavel M, Siminoff LA, Valley DR, Rohrer DC, Jewell SD, Branton PA, Sobin LH, Barcus M, Qi L, McLean J, Hariharan P, Um KS, Wu S, Tabor D, Shive C, Smith AM, Buia SA, Undale AH, Robinson KL, Roche N, Valentino KM, Britton A, Burges R, Bradbury D, Hambright KW, Seleski J, Korzeniewski GE, Erickson K, Marcus Y, Tejada J, Taherian M, Lu C, Basile M, Mash DC, Volpi S, Struewing JP, Temple GF, Boyer J, Colantuoni D, Little R, Koester S, Carithers LJ, Moore HM, Guan P, Compton C, Sawyer SJ, Demchok JP, Vaught JB, Rabiner CA, Lockhart NC, Ardlie KG, Getz G, Wright FA, Kellis M, Volpi S, Dermitzakis ET.; Understanding the functional consequences of genetic variation, and how it affects complex human disease and quantitative traits, remains a critical challenge for biomedicine. We present an analysis of RNA sequencing data from 1641 samples across 43 tissues from 175 individuals, generated as part of the pilot phase of the Genotype-Tissue Expression (GTEx) project. We describe the landscape of gene expression across tissues, catalog thousands of tissue-specific and shared regulatory expression quantitative trait loci (eQTL) variants, describe complex network relationships, and identify signals from genome-wide association studies explained by eQTLs. These findings provide a systematic understanding of the cellular and biological consequences of human genetic variation and of the heterogeneity of such effects among a diverse set of human tissues.
- Published
- 2015
40. Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases
- Author
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Mark I. McCarthy, Joel N. Hirschhorn, Karna Robinson, Edmund Lo, Shenpei Wu, Stephen A. Buia, Jeffrey A. Thomas, David S. DeLuca, Francesca Petralia, Saboor Shad, Casandra A. Trowbridge, Simona Volpi, Debra Bradbury, Gad Getz, Zhidong Tu, Jialiang Yang, Magboeba Mosavel, Eric R. Gamazon, Carmen Argmann, Tuuli Lappalainen, Rick Hasz, Kimberly Ramsey, Deborah Colantuoni, Xiaoquan Wen, Nicole C. Lockhart, Gary F. Temple, Margaret J. Basile, Jonathan K. Pritchard, Julian Maller, Monkol Lek, Alexis Battle, Ellen Gelfand, Bryan Gillard, Dana R. Valley, Quan Long, Ellen Karasik, Anna M. Smith, Roderic Guigó, Daphne Koller, Halit Ongen, John T. Lonsdale, Daniel C. Rohrer, Helen M. Moore, Kristin G. Ardlie, Charles Shive, Ping Guan, Charles V. Mobbs, Taru Tukiainen, Nancy Roche, Taylor Young, Philip A. Branton, Anuar Konkashbaev, Matthew Stephens, Fred A. Wright, Gary Walters, Amanda M. V. Brown, Pedro G. Ferreira, Christopher Choi, Denee Tidwell, Greg E. Korzeniewski, Lucas D. Ward, Andrey A. Shablin, Scott Jewel, Manuel A. Rivas, Yan Meng, Timothée Flutre, Pushpa Hariharan, Deborah C. Mash, Susan E. Koester, John Seleski, Johnelle Fleming, Susan L. Sullivan, Kimberly M. Valentino, Yi-Hui Zhou, Harold Magazine, Latarsha J. Carithers, Jorge Tejada, Daniel G. MacArthur, Mark Miklos, Dan L. Nicolae, Chana A. Rabiner, Roger Little, Nancy J. Cox, Pouya Kheradpour, Jeff Struewing, Barnaby E. Robles, Sara Mostafavi, Yong Zhao, Kenneth W. Hambright, Michael Sammeth, Sherilyn Sawyer, Joy T. Boyer, Manolis Kellis, Robin Burges, Mike Salvatore, Wendy Winckler, Angela Britton, Gen Li, Cameron D. Palmer, Jason Bridge, Tao Huang, Laura Barker, Emmanouil T. Dermitzakis, Mehran Taherian, Ayellet V. Segrè, Luan Lin, Laura A. Siminoff, Ferran Reverter, John Syron, Jimmie B. Vaught, Jun Zhu, Bin Zhang, Benjamin Iriarte, Jean Monlong, Jakob Goldman, Marta Melé, Michael T. Moser, Ivan Rusyn, Andrew B. Nobel, Timothy J. Sullivan, Heather M. Traino, Carolyn C. Compton, Chunrong Lu, Jun Liu, Anita H. Undale, Kenyon Erickson, Eric E. Schadt, Leslie H. Sobin, Bernadette Mestichelli, David Tabor, Yvonne Marcus, Liqun Qi, Barbara A. Foster, Joanne P. Demchok, Dermitzakis, Emmanouil, Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science, Ward, Lucas D., Kheradpour, Pouya, Iriarte, Benjamin, and Kellis, Manolis
- Subjects
Adult ,Male ,Systems biology ,Gene Expression ,Computational biology ,Biology ,medicine.disease_cause ,Biologia computacional ,Article ,Organ Specificity/genetics ,Transcriptome ,03 medical and health sciences ,Mice ,Young Adult ,0302 clinical medicine ,Gene expression ,medicine ,Aging/genetics ,Animals ,Cluster Analysis ,Humans ,ddc:576.5 ,Gene ,Genetic Association Studies ,030304 developmental biology ,Aged ,Genetics ,Regulation of gene expression ,0303 health sciences ,Mutation ,Multidisciplinary ,Gene Expression Profiling ,Molecular Sequence Annotation ,Computational Biology/methods ,Middle Aged ,3. Good health ,Gene expression profiling ,Gene Expression Regulation ,Female ,Organ Specificity ,030217 neurology & neurosurgery - Abstract
Aging is one of the most important biological processes and is a known risk factor for many age-related diseases in human. Studying age-related transcriptomic changes in tissues across the whole body can provide valuable information for a holistic understanding of this fundamental process. In this work, we catalogue age-related gene expression changes in nine tissues from nearly two hundred individuals collected by the Genotype-Tissue Expression (GTEx) project. In general, we find the aging gene expression signatures are very tissue specific. However, enrichment for some well-known aging components such as mitochondria biology is observed in many tissues. Different levels of cross-tissue synchronization of age-related gene expression changes are observed, and some essential tissues (e.g., heart and lung) show much stronger “co-aging” than other tissues based on a principal component analysis. The aging gene signatures and complex disease genes show a complex overlapping pattern and only in some cases, we see that they are significantly overlapped in the tissues affected by the corresponding diseases. In summary, our analyses provide novel insights to the co-regulation of age-related gene expression in multiple tissues; it also presents a tissue-specific view of the link between aging and age-related diseases., National Cancer Institute (U.S.), National Human Genome Research Institute (U.S.), National Heart, Lung, and Blood Institute, National Institute on Drug Abuse (NIDA), National Institute of Mental Health (U.S.), National Institute of Neurological Disorders and Stroke (U.S.)
- Published
- 2015
41. Distal ureter morphogenesis depends on epithelial cell remodeling mediated by vitamin A and Ret
- Author
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Frank Costantini, Robert L. Bacallao, Terry W. Hensle, Ekatherina Batourina, Anita Schuchardt, Christopher Choi, Cathy Mendelsohn, Natalie A. Bello, and Neal Paragas
- Subjects
Vitamin ,congenital, hereditary, and neonatal diseases and abnormalities ,endocrine system ,endocrine system diseases ,Receptors, Retinoic Acid ,Urinary Bladder ,Morphogenesis ,Mice, Transgenic ,Biology ,Proto-Oncogene Mas ,Mice ,chemistry.chemical_compound ,Ureter maturation ,Proto-Oncogene Proteins ,Genetics ,medicine ,Animals ,Drosophila Proteins ,Vitamin A ,neoplasms ,Mice, Knockout ,Retinoic Acid Receptor alpha ,Proto-Oncogene Proteins c-ret ,Receptor Protein-Tyrosine Kinases ,Epithelial Cells ,Anatomy ,Distal ureter ,Epithelium ,Cell biology ,medicine.anatomical_structure ,chemistry ,Ureter ,Signal Transduction - Abstract
Almost 1% of human infants are born with urogenital abnormalities, many of which are linked to irregular connections between the distal ureters and the bladder. During development, ureters migrate by an unknown mechanism from their initial integration site in the Wolffian ducts up to the base of the bladder in a process that we call ureter maturation. Rara(-/-) Rarb2(-/-) mice display impaired vitamin A signaling and develop syndromic urogenital malformations similar to those that occur in humans, including renal hypoplasia, hydronephrosis and mega-ureter, abnormalities also seen in mice with mutations in the proto-oncogene Ret. Here we show that ureter maturation depends on formation of the 'trigonal wedge', a newly identified epithelial outgrowth from the base of the Wolffian ducts, and that the distal ureter abnormalities seen in Rara(-/-) Rarb2(-/-) and Ret(-/-) mutant mice are probably caused by a failure of this process. Our studies indicate that formation of the trigonal wedge may be essential for correct insertion of the distal ureters into the bladder, and that these events are mediated by the vitamin A and Ret signaling pathways.
- Published
- 2002
42. Contributors
- Author
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Md. Latiful Bari, Jerry A. Bartz, Alejandro Castillo, Nohelia Castro-del Campo, Christobal Chaidez-Quiroz, Benjamin J. Chapman, Christopher Choi, Larry Clark, Kofitsyo S. Cudjoe, Michael Doyle, Jeff Farrar, Charles Gerba, Jack Guzewich, Kenji Isshiki, Casey J. Jacob, Gro S. Johannessen, Shinichi Kawamoto, Susanne E. Keller, Kalmia E. Kniel, Miguel A. Martínez-Téllez, Karl R. Matthews, Patricia Millner, Brendan A. Niemira, Douglas Powell, Daniel H. Rice, M. Ofelia Rodríguez-García, Gerald M. Sapers, Manan Sharma, Adrienne E.H. Shearer, Takeo Shiina, Jorge H. Siller-Cepeda, Ethan B. Solomon, and Howard Q. Zhang
- Published
- 2009
43. Coupling diurnal cytosolic Ca2+ oscillations to the CAS-IP3 pathway in Arabidopsis
- Author
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Hai-Lei Zheng, Christopher Choi, Shengcheng Han, Todd E. Woerner, Charles W. Cook, Zhen-Ming Pei, Ruhang Tang, and Robert B. Jackson
- Subjects
Luminescence ,Arabidopsis ,chemistry.chemical_element ,Inositol 1,4,5-Trisphosphate ,Calcium ,chemistry.chemical_compound ,Soil ,Aequorin ,TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITY ,Guard cell ,Extracellular ,Humans ,Inositol ,Calcium Signaling ,Cloning, Molecular ,Ion transporter ,Calcium signaling ,Multidisciplinary ,Ion Transport ,biology ,Arabidopsis Proteins ,Plant Transpiration ,biology.organism_classification ,Circadian Rhythm ,Cytosol ,chemistry ,Biochemistry ,Biophysics ,Receptors, Calcium-Sensing ,Plant Shoots - Abstract
Various signaling pathways rely on changes in cytosolic calcium ion concentration ([Ca 2+ ] i ). In plants, resting [Ca 2+ ] i oscillates diurnally. We show that in Arabidopsis thaliana , [Ca 2+ ] i oscillations are synchronized to extracellular Ca 2+ concentration ([Ca 2+ ] o ) oscillations largely through the Ca 2+ -sensing receptor CAS. CAS regulates concentrations of inositol 1,4,5-trisphosphate (IP 3 ), whichinturndirects release of Ca 2+ from internal stores. The oscillating amplitudes of [Ca 2+ ] o and [Ca 2+ ] i are controlled by soil Ca 2+ concentrations and transpiration rates. The phase and period of oscillations are likely determined by stomatal conductance. Thus, the internal concentration of Ca 2+ in plant cells is constantly being actively revised.
- Published
- 2007
44. Seizure-like activity and prolonged central nervous system side effects after intravenous sedation
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Ronald Schneider, Doron Kalman, Christopher Choi, and Uday N. Reebye
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Adult ,Male ,Myoclonus ,Paranoid Disorders ,medicine.medical_specialty ,Spasm ,Anesthesia, Dental ,Midazolam ,Conscious Sedation ,Intravenous sedation ,Free flap ,medicine ,Humans ,Drug Interactions ,Fibula ,Propofol ,Anterior neck ,business.industry ,Mandible ,Nerve Block ,Pedicled Flap ,Chin ,Surgery ,Fentanyl ,medicine.anatomical_structure ,Otorhinolaryngology ,Tooth Extraction ,Oral Surgery ,business ,Clin oncol ,Anesthetics, Intravenous - Abstract
105:2440, 2000 11. Nisanci M, Turegun M, Er E, et al: Reconstruction of the middle and lower face with three simultaneous free flaps: Combined use of bilateral fibular flaps for maxillomandibular reconstruction. Ann Plast Surg 51:301, 2003 12. Zhang C, Zhang Z: Reconstruction of mandible with fibular flap and dental implant distractor: A new approach. Chin Med J 115:1877, 2002 13. Barton FE Jr, Spicer TE, Byrd HS: Head and neck reconstruction with the latissimus dorsi myocutaneous flap: Anatomic observations and a report of 60 cases. Plast Reconstr Surg 71:199, 1983 14. Hayden RE, Kirby SD, Deschler DG: Technical modifications of the latissimus dorsi pedicled flap to increase versatility and viability. Laryngoscope 110:352, 2000 15. Shigemitsu K, Naomoto Y, Haisa M, et al: A case of thyroid cancer involving the trachea: Treatment by partial tracheal resection and repair with a latissimus dorsi musculocutaneous flap. Jpn J Clin Oncol 30:235, 2000 16. Wu LY, Halim AS, Sain AH: Laminated pedicled latissimus dorsi myocutaneous flap for single-stage reconstruction of a composite anterior neck and tracheal defect. J Otolaryngol 34:69, 2005 17. Zbar RI, Funk GF, McCulloch TM, et al: Pectoralis major myofascial flap: A valuable tool in contemporary head and neck reconstruction. Head Neck 19:412, 1997 18. Liu R, Gullane P, Brown D, et al: Pectoralis major myocutaneous pedicled flap in head and neck reconstruction: A retrospective review of indications and results in 244 consecutive cases at Toronto General Hospital. J Otolaryngol 30:34, 2001 19. Vartanian JG, Carvalho AL, Carvalho SM, et al: Pectoralis major and other myofascial/myocutaneous flaps in head and neck cancer reconstruction: Experience with 437 cases at a single institution. Head Neck 26:1018, 2004 20. Wei FC, Chen HC, Chuang CC, et al: Fibular osteoseptocutaneous flap: Anatomic study and clinical application. Plast Reconstr Surg 78:191, 1986 21. Jones NF, Monstrey S, Gambier BA: Reliability of the fibular osteocutaneous flap for mandibular reconstruction: Anatomical and surgical confirmation. Plast Reconstr Surg 97:707, 1996 22. Ferri J, Piot B, Ruhin B, et al: Advantages and limitations of the fibula free flap in mandibular reconstruction. J Oral Maxillofac Surg 55:440, 1997 23. Chang YM, Santamaria E, Wei FC, et al: Primary insertion of osseointegrated dental implants into fibula osteoseptocutaneous free flap for mandible reconstruction. Plast Reconstr Surg 102:680, 1998
- Published
- 2006
45. What does the fact of advertising convey to patients?
- Author
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Ashi, Adamjee, David, Alfi, Divya, Agarwal, Yetunde, Braithwaite, Judy, Chan, Marshall, Chey, Hyung, Cho, and Christopher, Choi
- Subjects
Marketing of Health Services ,Ethics, Dental ,Socioeconomic Factors ,Advertising ,Public Opinion ,Humans ,Social Change ,Dental Care ,Truth Disclosure ,Dentist-Patient Relations - Published
- 2006
46. Simultaneous papillary muscle avulsion and free wall rupture during acute myocardial infarction. Intra-aortic balloon pump: a bridge to survival
- Author
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John P, Liuzzo, Yong T, Shin, Christopher, Choi, Sanjaykumar, Patel, Robert, Braff, and John T, Coppola
- Subjects
Aged, 80 and over ,Male ,Intra-Aortic Balloon Pumping ,Heart Injuries ,Rupture, Spontaneous ,Myocardial Infarction ,Humans ,Mitral Valve Insufficiency ,Angioplasty, Balloon, Coronary ,Cardiac Surgical Procedures ,Papillary Muscles ,Lacerations - Abstract
Mechanical complications of acute myocardial infarction (AMI) are rare, but often fatal. Medical therapy does not provide adequate risk reduction, and surgical correction is recommended when feasible. Supplemental hemodynamic support utilizing intra-aortic counterpulsation with a balloon pump provides an improvement in morbidity and mortality when combined with a corrective surgical approach. We report a case of an elderly male with a progressive 2-week history of ischemic symptoms presenting with acute pulmonary edema, hypotension and an inferior wall ST-elevation MI. His hospital course was complicated by ischemic mitral regurgitation (MR) and cardiogenic shock, which resulted in a papillary muscle rupture/avulsion from the inferolateral myocardial wall, and a communication for blood from ventricle to pericardial space. Initial management included mechanical ventilation, pharmacologic inotropic support, percutaneous revascularization of the culprit lesion and intra-aortic balloon counterpulsation. The patient underwent further successful cardiovascular surgical correction of his incompetent mitral valve, free wall rupture and other obstructive coronary arteries, leading to discharge and survival. Mechanical complications from AMI and the role of intra-aortic balloon support are discussed.
- Published
- 2006
47. Foxd1-dependent signals control cellularity in the renal capsule, a structure required for normal renal development
- Author
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Marina Vorontchikhina, Ekatherina Batourina, Randy S. Levinson, Christopher Choi, Jan Kitajewski, and Cathy Mendelsohn
- Subjects
Heterozygote ,Nerve Tissue Proteins ,Nephron ,Bone Morphogenetic Protein 4 ,Biology ,Kidney ,Mesoderm ,Mice ,Stroma ,Renal capsule ,medicine ,Animals ,Molecular Biology ,Renal stem cell ,Body Patterning ,Mice, Knockout ,Kidney metabolism ,Capsule ,Gene Expression Regulation, Developmental ,Forkhead Transcription Factors ,Anatomy ,Cell biology ,DNA-Binding Proteins ,medicine.anatomical_structure ,Bone morphogenetic protein 4 ,Bone Morphogenetic Proteins ,Mutation ,Ureter ,Developmental Biology ,Signal Transduction - Abstract
Development of the metanephric kidney involves the establishment of discrete zones of induction and differentiation that are crucial to the future radial patterning of the organ. Genetic deletion of the forkhead transcription factor, Foxd1, results in striking renal abnormalities, including the loss of these discrete zones and pelvic fused kidneys. We have investigated the molecular and cellular basis of the kidney phenotypes displayed by Foxd1-null embryos and report here that they are likely to be caused by a failure in the correct formation of the renal capsule. Unlike the single layer of Foxd1-positive stroma that comprises the normal renal capsule, the mutant capsule contains heterogeneous layers of cells, including Bmp4-expressing cells, which induce ectopic phospho-Smad1 signaling in nephron progenitors. This missignaling disrupts their early patterning,which, in turn, causes mispatterning of the ureteric tree, while delaying and disorganizing nephrogenesis. In addition, the defects in capsule formation prevent the kidneys from detaching from the body wall, thus explaining their fusion and pelvic location. For the first time, functions have been ascribed to the renal capsule that include delineation of the organ and acting as a barrier to inappropriate exogenous signals, while providing a source of endogenous signals that are crucial to the establishment of the correct zones of induction and differentiation.
- Published
- 2005
48. Virtual Surgical Planning for Custom TMJ Prosthetic Joint Replacement With Simultaneous Orthognathic Surgery
- Author
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B.B. Farrell, S.L. Bobek, R.B. Bell, Christopher Choi, and J.C. Nale
- Subjects
Orthodontics ,Otorhinolaryngology ,Prosthetic joint ,business.industry ,medicine.medical_treatment ,Orthognathic surgery ,medicine ,Surgery ,Oral Surgery ,business ,Surgical planning - Published
- 2013
49. Mammogram registration using the Cauchy-Navier spline
- Author
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Michael Wirth and Christopher Choi
- Subjects
medicine.diagnostic_test ,business.industry ,Cauchy distribution ,Spline (mathematics) ,Breast positioning ,medicine ,Mammography ,Computer vision ,Radial basis function ,Artificial intelligence ,Affine transformation ,skin and connective tissue diseases ,business ,health care economics and organizations ,Mathematics - Abstract
The process of comparative analysis involves inspecting mammograms for characteristic signs of potential cancer by comparing various analogous mammograms. Factors such as the deformable behavior of the breast, changes in breast positioning, and the amount/geometry of compression may contribute to spatial differences between corresponding structures in corresponding mammograms, thereby significantly complicating comparative analysis. Mammogram registration is a process whereby spatial differences between mammograms can be reduced. Presented in this paper is a nonrigid approach to matching corresponding mammograms based on a physical registration model. Many of the earliest approaches to mammogram registration used spatial transformations which were innately rigid or affine in nature. More recently algorithms have incorporated radial basis functions such as the Thin-Plate Spline to match mammograms. The approach presented here focuses on the use of the Cauchy-Navier Spline, a deformable registration model which offers approximate nonrigid registration. The utility of the Cauchy-Navier Spline is illustrated by matching both temporal and bilateral mammograms.
- Published
- 2001
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