33 results on '"Christophe Côme"'
Search Results
2. SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization
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Nkerorema Djodji Damas, Michela Marcatti, Christophe Côme, Lise Lotte Christensen, Morten Muhlig Nielsen, Roland Baumgartner, Helene Maria Gylling, Giulia Maglieri, Carsten Friis Rundsten, Stefan E. Seemann, Nicolas Rapin, Simon Thézenas, Søren Vang, Torben Ørntoft, Claus Lindbjerg Andersen, Jakob Skou Pedersen, and Anders H. Lund
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Science - Abstract
Several lncRNAs have been linked to cancer. Here, the authors identify SNHG5 as a long non-coding RNA promoting proliferation and survival of colorectal cancer cells by protecting specific mRNAs from STAU1-mediated degradation.
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- 2016
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3. CIP2A Promotes T-Cell Activation and Immune Response to Listeria monocytogenes Infection.
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Christophe Côme, Anna Cvrljevic, Mohd Moin Khan, Irina Treise, Thure Adler, Juan Antonio Aguilar-Pimentel, Byron Au-Yeung, Eleonora Sittig, Teemu Daniel Laajala, Yiling Chen, Sebastian Oeder, Julia Calzada-Wack, Marion Horsch, Tero Aittokallio, Dirk H Busch, Markus W Ollert, Frauke Neff, Johannes Beckers, Valerie Gailus-Durner, Helmut Fuchs, Martin Hrabě de Angelis, Zhi Chen, Riitta Lahesmaa, and Jukka Westermarck
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Medicine ,Science - Abstract
The oncoprotein Cancerous Inhibitor of Protein Phosphatase 2A (CIP2A) is overexpressed in most malignancies and is an obvious candidate target protein for future cancer therapies. However, the physiological importance of CIP2A-mediated PP2A inhibition is largely unknown. As PP2A regulates immune responses, we investigated the role of CIP2A in normal immune system development and during immune response in vivo. We show that CIP2A-deficient mice (CIP2AHOZ) present a normal immune system development and function in unchallenged conditions. However when challenged with Listeria monocytogenes, CIP2AHOZ mice display an impaired adaptive immune response that is combined with decreased frequency of both CD4+ T-cells and CD8+ effector T-cells. Importantly, the cell autonomous effect of CIP2A deficiency for T-cell activation was confirmed. Induction of CIP2A expression during T-cell activation was dependent on Zap70 activity. Thus, we reveal CIP2A as a hitherto unrecognized mediator of T-cell activation during adaptive immune response. These results also reveal CIP2AHOZ as a possible novel mouse model for studying the role of PP2A activity in immune regulation. On the other hand, the results also indicate that CIP2A targeting cancer therapies would not cause serious immunological side-effects.
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- 2016
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4. Cox4i2, Ifit2, and Prdm11 Mutant Mice: Effective Selection of Genes Predisposing to an Altered Airway Inflammatory Response from a Large Compendium of Mutant Mouse Lines.
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Marion Horsch, Juan Antonio Aguilar-Pimentel, Clemens Bönisch, Christophe Côme, Cathrine Kolster-Fog, Klaus T Jensen, Anders H Lund, Icksoo Lee, Lawrence I Grossman, Christopher Sinkler, Maik Hüttemann, Erwin Bohn, Helmut Fuchs, Markus Ollert, Valérie Gailus-Durner, Martin Hrabĕ de Angelis, and Johannes Beckers
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Medicine ,Science - Abstract
We established a selection strategy to identify new models for an altered airway inflammatory response from a large compendium of mutant mouse lines that were systemically phenotyped in the German Mouse Clinic (GMC). As selection criteria we included published gene functional data, as well as immunological and transcriptome data from GMC phenotyping screens under standard conditions. Applying these criteria we identified a few from several hundred mutant mouse lines and further characterized the Cox4i2tm1Hutt, Ifit2tm1.1Ebsb, and Prdm11tm1.1ahl lines following ovalbumin (OVA) sensitization and repeated OVA airway challenge. Challenged Prdm11tm1.1ahl mice exhibited changes in B cell counts, CD4+ T cell counts, and in the number of neutrophils in bronchoalveolar lavages, whereas challenged Ifit2tm1.1Ebsb mice displayed alterations in plasma IgE, IgG1, IgG3, and IgM levels compared to the challenged wild type littermates. In contrast, challenged Cox4i2tm1Hutt mutant mice did not show alterations in the humoral or cellular immune response compared to challenged wild type mice. Transcriptome analyses from lungs of the challenged mutant mouse lines showed extensive changes in gene expression in Prdm11tm1.1ahl mice. Functional annotations of regulated genes of all three mutant mouse lines were primarily related to inflammation and airway smooth muscle (ASM) remodeling. We were thus able to define an effective selection strategy to identify new candidate genes for the predisposition to an altered airway inflammatory response under OVA challenge conditions. Similar selection strategies may be used for the analysis of additional genotype-envirotype interactions for other diseases.
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- 2015
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5. Slug controls stem/progenitor cell growth dynamics during mammary gland morphogenesis.
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Mayssa Nassour, Ysia Idoux-Gillet, Abdelkader Selmi, Christophe Côme, Maria-Luisa M Faraldo, Marie-Ange Deugnier, and Pierre Savagner
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Medicine ,Science - Abstract
Morphogenesis results from the coordination of distinct cell signaling pathways controlling migration, differentiation, apoptosis, and proliferation, along stem/progenitor cell dynamics. To decipher this puzzle, we focused on epithelial-mesenchymal transition (EMT) "master genes". EMT has emerged as a unifying concept, involving cell-cell adhesion, migration and apoptotic pathways. EMT also appears to mingle with stemness. However, very little is known on the physiological role and relevance of EMT master-genes. We addressed this question during mammary morphogenesis. Recently, a link between Slug/Snai2 and stemness has been described in mammary epithelial cells, but EMT master genes actual localization, role and targets during mammary gland morphogenesis are not known and we focused on this basic question.Using a Slug-lacZ transgenic model and immunolocalization, we located Slug in a distinct subpopulation covering about 10-20% basal cap and duct cells, mostly cycling cells, coexpressed with basal markers P-cadherin, CK5 and CD49f. During puberty, Slug-deficient mammary epithelium exhibited a delayed development after transplantation, contained less cycling cells, and overexpressed CK8/18, ER, GATA3 and BMI1 genes, linked to luminal lineage. Other EMT master genes were overexpressed, suggesting compensation mechanisms. Gain/loss-of-function in vitro experiments confirmed Slug control of mammary epithelial cell luminal differentiation and proliferation. In addition, they showed that Slug enhances specifically clonal mammosphere emergence and growth, cell motility, and represses apoptosis. Strikingly, Slug-deprived mammary epithelial cells lost their potential to generate secondary clonal mammospheres.We conclude that Slug pathway controls the growth dynamics of a subpopulation of cycling progenitor basal cells during mammary morphogenesis. Overall, our data better define a key mechanism coordinating cell lineage dynamics and morphogenesis, and provide physiological relevance to broadening EMT pathways.
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- 2012
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6. CIP2A promotes proliferation of spermatogonial progenitor cells and spermatogenesis in mice.
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Sami Ventelä, Christophe Côme, Juho-Antti Mäkelä, Robin M Hobbs, Leni Mannermaa, Markku Kallajoki, Edward K Chan, Pier Paolo Pandolfi, Jorma Toppari, and Jukka Westermarck
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Medicine ,Science - Abstract
Protein phosphatase 2A (PP2A) is a critical regulator of protein serine/threonine phosphorylation. However, the physiological and developmental roles of different PP2A complexes are very poorly understood. Here, we show that a newly characterized PP2A inhibitory protein CIP2A is co-expressed with ki-67 and with self-renewal protein PLZF in the spermatogonial progenitor cell (SPC) population in the testis. CIP2A and PLZF expression was shown also to correlate Ki-67 expression in human testicular spermatogonia. Functionally, CIP2A mutant mouse testes exhibited smaller number of PLZF-positive SPCs and reduced sperm counts. Moreover, seminiferous tubuli cells isolated from CIP2A mutant mice showed reduced expression of Plzf and other renewal genes Oct-4 and Nanog at mRNA level. However, PLZF-deficient testes did not show altered CIP2A expression. Importantly, spermatogonia-specific restoration of CIP2A expression rescued PLZF expression and sperm production defects observed in CIP2A mutant mice. Taken together, these results reveal first physiological function for an emerging human oncoprotein CIP2A, and provide insights into maintenance of PLZF-positive progenitors. Moreover, demonstration that CIP2A expression can be systematically inhibited without severe consequences to normal mouse development and viability may have clinical relevance regarding targeting of oncogenic CIP2A for future cancer therapies.
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- 2012
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7. Impact of U2AF1 mutations on circular RNA expression in myelodysplastic neoplasms
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Eileen Wedge, Ulvi Ahmadov, Thomas B. Hansen, Zongliang Gao, Morten Tulstrup, Christophe Côme, Sridhar Nonavinkere Srivatsan, Tanzir Ahmed, Jakob S. Jespersen, Balthasar C. Schlotmann, Claudia Schöllkopf, Klas Raaschou-Jensen, Niels Ødum, Jørgen Kjems, Rasmus O. Bak, Matthew J. Walter, Kirsten Grønbæk, and Lasse S. Kristensen
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Cancer Research ,Mice ,Splicing Factor U2AF/genetics ,Oncology ,Doxycycline ,Neoplasms ,RNA Splicing ,RNA, Circular/genetics ,Mutation ,Animals ,Hematology ,RNA Splicing Factors/genetics ,Myelodysplastic Syndromes/genetics - Abstract
Mutations in U2AF1 are relatively common in myelodysplastic neoplasms (MDS) and are associated with an inferior prognosis, but the molecular mechanisms underlying this are not fully elucidated. Circular RNAs (circRNAs) have been implicated in cancer, but it is unknown how mutations in splicing factors may impact on circRNA biogenesis. Here, we used RNA-sequencing to investigate the effects of U2AF1 mutations on circRNA expression in K562 cells with a doxycycline-inducible U2AF1 S34 mutation, in a mouse model with a doxycycline-inducible U2AF1 S34 mutation, and in FACS-sorted CD34+ bone marrow cells from MDS patients with either U2AF1 S34 or U2AF1 Q157 mutations. In all contexts, we found an increase in global circRNA levels in the U2AF1-mutated setting, which was independent of expression changes in the cognate linear host genes. In patients, the U2AF1 S34 and U2AF1 Q157 mutations were both associated with an overall increased expression of circRNAs. circRNAs generated by a non-Alu-mediated mechanism generally showed the largest increase in expression levels. Several well-described cancer-associated circRNAs, including circZNF609 and circCSNK1G3, were upregulated in MDS patients with U2AF1 mutations compared to U2AF1-wildtype MDS controls. In conclusion, high circRNA expression is observed in association with U2AF1 mutations in three biological systems, presenting an interesting possibility for biomarker and therapeutic investigation.
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- 2023
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8. Data from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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Pierre Savagner, Charles Theillet, Karl Friedrich Becker, Pascal De Santa Barbara, Frédéric Bibeau, Fabrice Magnino, and Christophe Côme
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Purpose: Carcinoma progression is linked to a partially dedifferentiated epithelial cell phenotype. As previously suggested, this regulation could involve transcription factors, Snail and Slug, known to promote epithelial-mesenchymal transitions during development. Here, we investigate the role of Snail and Slug in human breast cancer progression.Experimental Design: We analyzed Snail, Slug, and E-cadherin RNA expression levels and protein localization in large numbers of transformed cell lines and breast carcinomas, examined the correlation with tumor histologic features, and described, at the cellular level, Snail and Slug localization in carcinomas using combined in situ hybridization and immunolocalization.Results: In contrast with transformed cell lines, Slug was found to colocalize with E-cadherin at the cellular level in normal mammary epithelial cells and all tested carcinomas. Snail also colocalized at the cellular level with E-cadherin in tumors expressing high levels of Snail RNA. In addition, Snail was significantly expressed in tumor stroma, varying with tumors. Slug and Snail genes were significantly overexpressed in tumors associated with lymph node metastasis. Finally, the presence of semidifferentiated tubules within ductal carcinomas was linked to Slug expression levels similar to or above normal breast samples.Conclusions: These results suggest that Snail or Slug expression in carcinoma cells does not generally preclude significant E-cadherin expression. They emphasize a link between Snail, Slug, and lymph node metastasis in a large sampling of mammary carcinomas, and suggest a role for Slug in the maintenance of semidifferentiated structures. Snail and Slug proteins seem to support distinct tumor invasion modes and could provide new therapeutic targets.
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- 2023
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9. Supplementary Tables 2-3 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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Pierre Savagner, Charles Theillet, Karl Friedrich Becker, Pascal De Santa Barbara, Frédéric Bibeau, Fabrice Magnino, and Christophe Côme
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Supplementary Tables 2-3 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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- 2023
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10. Supplementary Figures 2-3 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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Pierre Savagner, Charles Theillet, Karl Friedrich Becker, Pascal De Santa Barbara, Frédéric Bibeau, Fabrice Magnino, and Christophe Côme
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Supplementary Figures 2-3 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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- 2023
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11. Supplementary Figure 1 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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Pierre Savagner, Charles Theillet, Karl Friedrich Becker, Pascal De Santa Barbara, Frédéric Bibeau, Fabrice Magnino, and Christophe Côme
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Supplementary Figure 1 from Snail and Slug Play Distinct Roles during Breast Carcinoma Progression
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- 2023
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12. Supplementary Data from CIP2A Is Associated with Human Breast Cancer Aggressivity
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Jukka Westermarck, Simon Thézenas, Olli Kallioniemi, Jean-Marie Darbon, Jorma Isola, Johanna Ivaska, Jos Jonkers, Xiaoling Liu, Elina Mattila, Henrik Edgren, Maïa Chanrion, Anni Laine, and Christophe Côme
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Supplementary Data from CIP2A Is Associated with Human Breast Cancer Aggressivity
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- 2023
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13. Myelodysplastic syndrome patient-derived xenografts: from no options to many
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Dominique Bonnet, Christophe Côme, Bo T. Porse, and Alexander Balhuizen
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Oncology ,Human Biology & Physiology ,0303 health sciences ,medicine.medical_specialty ,Heterografts ,business.industry ,Stem Cells ,MEDLINE ,Hematology ,Tumour Biology ,Syndrome patient ,Disease Models, Animal ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,Myelodysplastic Syndromes ,Internal medicine ,Perspective Article ,medicine ,Animals ,Humans ,business ,030304 developmental biology ,030215 immunology - Abstract
No description supplied
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- 2020
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14. The Thioredoxin-Interacting Protein TXNIP Is a Putative Tumour Suppressor in Cutaneous T-Cell Lymphoma
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Helene Myrtue Nielsen, Lars Iversen, Tengpeng Hu, Kirsten Grønbæk, Claudia Nastasi, Terkild B. Buus, Martin Kongsbak-Wismann, Anders Woetmann, Trine B. Levring, Simon Fredholm, Veronica Stolearenco, Maria Gluud, Carsten Geisler, Özcan Met, Christophe Côme, Lise M. Lindahl, Charlotte M. Bonefeld, Niels Ødum, Thorbjørn Krejsgaard, and Andreas Willerslev-Olsen
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Indoles ,Skin Neoplasms ,Thioredoxin-Interacting Protein ,Pyridones ,Bisulfite sequencing ,Dermatology ,Biology ,Epigenesis, Genetic ,chemistry.chemical_compound ,Cell Line, Tumor ,medicine ,Humans ,Enhancer of Zeste Homolog 2 Protein ,Gene Silencing ,Enzyme Inhibitors ,Promoter Regions, Genetic ,Cell Proliferation ,Cell growth ,EZH2 ,Cutaneous T-cell lymphoma ,DNA Methylation ,medicine.disease ,Lymphoma, T-Cell, Cutaneous ,Demethylating agent ,chemistry ,Cell culture ,Cancer research ,Carrier Proteins ,TXNIP - Abstract
Background: The thioredoxin-interacting protein (TXNIP) is involved in cellular metabolism and cell proliferation, and recently, deficient expression of TXNIP has been associated with progression and poor outcome for cancer patients. Objectives: To assess TXNIP expression and function in malignant T cells from cutaneous T-cell lymphoma (CTCL). Methods: CTCL-derived malignant (MyLa2059, PB2B) and non-malignant (MyLa1850) cell lines were analysed by Western blotting and qPCR for TXNIP expression. Subsequently, the malignant CTCL cell lines were treated with GSK126 – an inhibitor of enhancer of zeste homolog 2 (EZH2) methyltransferase activity or assessed by bisulphite sequencing for TXNIP promoter methylation. Methylation was also assessed with the demethylating agent 5-azacytidine (5AZA). Finally, TXNIP was overexpressed in the malignant PB2B cell line via plasmid transduction, and the effect of TXNIP was further analysed by flow cytometry. Results: We report on low expression of TXNIP protein in all cell lines representing different subtypes and stages of CTCL when compared to non-malignant T cells. Epigenetic silencing and other mechanisms were involved in the repression of TXNIP whereas forced expression of TXNIP strongly inhibited proliferation of malignant T cells. Conclusions: Epigenetic silencing and other as yet unknown mechanisms repress TXNIP expression in malignant T cells. As forced expression of TXNIP inhibits malignant proliferation, we propose that TXNIP is a putative tumour suppressor in CTCL.
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- 2021
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15. Profiling of ribose methylations in ribosomal RNA from diffuse large B-cell lymphoma patients for evaluation of ribosomes as drug targets
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Nicolai Krogh, Kirsten Grønbæk, Christophe Côme, Helga Fibiger Munch-Petersen, Henrik Nielsen, and Fazila Asmar
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AcademicSubjects/SCI01140 ,0301 basic medicine ,AcademicSubjects/SCI01060 ,Chemistry ,AcademicSubjects/SCI00030 ,Cell ,Ribosome biogenesis ,Standard Article ,Ribosomal RNA ,AcademicSubjects/SCI01180 ,medicine.disease ,Molecular biology ,Ribosome ,03 medical and health sciences ,A-site ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Cell culture ,030220 oncology & carcinogenesis ,hemic and lymphatic diseases ,Cancer cell ,medicine ,AcademicSubjects/SCI00980 ,Diffuse large B-cell lymphoma - Abstract
Cancer cells are addicted to ribosome biogenesis and high levels of translation. Thus, differential inhibition of cancer cells can be achieved by targeting aspects of ribosome biogenesis or ribosome function. Using RiboMeth-seq for profiling of the ∼112 2′-O-Me sites in human ribosomal RNA, we demonstrated pronounced hypomethylation at several sites in patient-derived diffuse large B-cell lymphoma (DLBCL) cell lines with a more severe perturbation in ABC-DLBCL compared to GBC-DLBCL. We extended our analysis to tumor samples from patients and demonstrated significant changes to the ribosomal modification pattern that appeared to consist of cell growth-related as well as tumor-specific changes. Sites of hypomethylation in patient samples are discussed as potential drug targets, using as an example a site in the small subunit (SSU-C1440) located in a ribosomal substructure that can be linked to DLBCL pathogenesis.
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- 2020
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16. Specific Lipid and Metabolic Profiles of R-CHOP-Resistant Diffuse Large B-Cell Lymphoma Elucidated by Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Imaging and in Vivo Imaging
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Florian P.Y. Barré, Christophe Côme, Frédéric Dewez, Britt S. R. Claes, Helga Fibiger Munch-Petersen, Berta Cillero-Pastor, Carine J. Peutz-Kootstra, Ron M. A. Heeren, Anders H. Lund, Kirsten Grønbæk, Imaging Mass Spectrometry (IMS), RS: M4I - Imaging Mass Spectrometry (IMS), Pathologie, MUMC+: DA Pat Pathologie (9), and RS: CARIM - R3.06 - The vulnerable plaque: makers and markers
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0301 basic medicine ,CHOP ,Phosphatidylinositols ,Analytical Chemistry ,Mice ,Adenosine Triphosphate ,0302 clinical medicine ,immune system diseases ,hemic and lymphatic diseases ,Antineoplastic Combined Chemotherapy Protocols ,BIOLOGICAL SAMPLES ,Principal Component Analysis ,CHOLINE METABOLISM ,Chemistry ,Discriminant Analysis ,CHEMOTHERAPY ,Lipids ,CANCER ,3. Good health ,030220 oncology & carcinogenesis ,Metabolome ,Rituximab ,Lymphoma, Large B-Cell, Diffuse ,medicine.drug ,EXPRESSION ,Vincristine ,Transplantation, Heterologous ,INHIBITION ,DIAGNOSIS ,Article ,Mass spectrometry imaging ,03 medical and health sciences ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Doxorubicin ,RITUXIMAB ,MALDI ,medicine.disease ,Lymphoma ,Transplantation ,030104 developmental biology ,RESOLUTION ,Drug Resistance, Neoplasm ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Luminescent Measurements ,Cancer research ,Neoplasm Recurrence, Local ,Diffuse large B-cell lymphoma - Abstract
Diffuse large B-cell lymphoma (DLBCL) is the most common B-cell non-Hodgkin lymphoma. To treat this aggressive disease, R-CHOP, a combination of immunotherapy (R; rituximab) and chemotherapy (CHOP; cyclophosphamide, doxorubicin, vincristine, and prednisone), remains the most commonly used regimen for newly diagnosed DLBCLs. However, up to one-third of patients ultimately becomes refractory to initial therapy or relapses after treatment, and the high mortality rate highlights the urgent need for novel therapeutic approaches based upon selective molecular targets. In order to understand the molecular mechanisms underlying relapsed DLBCL, we studied differences in the lipid and metabolic composition of nontreated and R-CHOP-resistant tumors, using a combination of in vivo DLBCL xenograft models and mass spectrometry imaging. Together, these techniques provide information regarding analyte composition and molecular distributions of therapy-resistant and sensitive areas. We found specific lipid and metabolic profiles for R-CHOP-resistant tumors, such as a higher presence of phosphatidylinositol and sphingomyelin fragments. In addition, we investigated intratumor heterogeneity and identified specific lipid markers of viable and necrotic areas. Furthermore, we could monitor metabolic changes and found reduced adenosine triphosphate and increased adenosine monophosphate in the R CHOP-resistant tumors. This work highlights the power of combining in vivo imaging and MSI to track molecular signatures in DLBCL, which has potential application for other diseases.
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- 2018
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17. Loss of PRDM11 promotes MYC-driven lymphomagenesis
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Carsten Friis, Kirsten Grønbæk, Linda Jacobsen, Christophe Côme, Klaus T. Jensen, Louise Rosgaard, Anders H. Lund, Cathrine K. Fog, Alison Louw, Fazila Asmar, Arie Koen Braat, Jens Vilstrup Johansen, Maarten van Lohuizen, Kristian Anthonsen, Elisabeth Ralfkiaer, Nina Friesgaard Øbro, Hanne Vibeke Marquart, and Tony Bou Kheir
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Lymphoma ,Molecular Sequence Data ,Immunology ,Biology ,Biochemistry ,law.invention ,Proto-Oncogene Proteins c-myc ,Gene Knockout Techniques ,Mice ,law ,medicine ,Animals ,Humans ,Gene ,Transcription factor ,Cells, Cultured ,Regulation of gene expression ,Tumor Suppressor Proteins ,HEK 293 cells ,Cell Biology ,Hematology ,Embryo, Mammalian ,medicine.disease ,Molecular biology ,Gene Expression Regulation, Neoplastic ,Cell Transformation, Neoplastic ,HEK293 Cells ,Knockout mouse ,Cancer research ,Suppressor ,Lymphoma, Large B-Cell, Diffuse ,Carrier Proteins ,Diffuse large B-cell lymphoma ,Gene Deletion ,HeLa Cells ,Transcription Factors - Abstract
The PR-domain (PRDM) family of genes encodes transcriptional regulators, several of which are deregulated in cancer. By using a functional screening approach, we sought to identify novel tumor suppressors among the PRDMs. Here we demonstrate oncogenic collaboration between depletion of the previously uncharacterized PR-domain family member Prdm11 and overexpression of MYC. Overexpression of PRDM11 inhibits proliferation and induces apoptosis. Prdm11 knockout mice are viable, and loss of Prdm11 accelerates MYC-driven lymphomagenesis in the Eµ-Myc mouse model. Moreover, we show that patients with PRDM11-deficient diffuse large B-cell lymphomas (DLBCLs) have poorer overall survival and belong to the nongerminal center B-cell-like subtype. Mechanistically, genome-wide mapping of PRDM11 binding sites coupled with transcriptome sequencing in human DLBCL cells evidenced that PRDM11 associates with transcriptional start sites of target genes and regulates important oncogenes such as FOS and JUN. Hence, we characterize PRDM11 as a putative novel tumor suppressor that controls the expression of key oncogenes, and we add new mechanistic insight into B-cell lymphomagenesis.
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- 2015
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18. SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization
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Lise Lotte Christensen, Jakob Skou Pedersen, Roland Baumgartner, Christophe Côme, Simon Thezenas, Michela Marcatti, Morten Muhlig Nielsen, Helene M. Gylling, Torben F. Ørntoft, Claus L. Andersen, Nicolas Rapin, Stefan E. Seemann, Søren Vang, Nkerorema Djodji Damas, Anders H. Lund, Giulia Maglieri, and Carsten Friis Rundsten
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0301 basic medicine ,Cell cycle checkpoint ,Cell Survival ,MRNA destabilization ,RNA Stability ,Science ,General Physics and Astronomy ,Apoptosis ,Biology ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Downregulation and upregulation ,Cell Line, Tumor ,Gene Knockdown Techniques ,Humans ,RNA, Messenger ,RNA, Neoplasm ,Cell Proliferation ,Gene knockdown ,Multidisciplinary ,Cell growth ,Proteins ,RNA-Binding Proteins ,General Chemistry ,HCT116 Cells ,Up-Regulation ,Cell biology ,Cytoskeletal Proteins ,030104 developmental biology ,Caco-2 ,RNA, Long Noncoding ,Caco-2 Cells ,Colorectal Neoplasms ,HT29 Cells - Abstract
We currently have limited knowledge of the involvement of long non-coding RNAs (lncRNAs) in normal cellular processes and pathologies. Here, we identify and characterize SNHG5 as a stable cytoplasmic lncRNA with up-regulated expression in colorectal cancer. Depletion of SNHG5 induces cell cycle arrest and apoptosis in vitro and limits tumour outgrowth in vivo, whereas SNHG5 overexpression counteracts oxaliplatin-induced apoptosis. Using an unbiased approach, we identify 121 transcript sites interacting with SNHG5 in the cytoplasm. Importantly, knockdown of key SNHG5 target transcripts, including SPATS2, induces apoptosis and thus mimics the effect seen following SNHG5 depletion. Mechanistically, we suggest that SNHG5 stabilizes the target transcripts by blocking their degradation by STAU1. Accordingly, depletion of STAU1 rescues the apoptosis induced after SNHG5 knockdown. Hence, we characterize SNHG5 as a lncRNA promoting tumour cell survival in colorectal cancer and delineate a novel mechanism in which a cytoplasmic lncRNA functions through blocking the action of STAU1., Several lncRNAs have been linked to cancer. Here, the authors identify SNHG5 as a long non-coding RNA promoting proliferation and survival of colorectal cancer cells by protecting specific mRNAs from STAU1-mediated degradation.
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- 2016
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19. A Circular RNA Molecule, circRAB11FIP1, Is Associated with TP53 Mutations and Is of Potential Prognostic and Functional Significance in Mantle Cell Lymphoma: Data from the Nordic MCL2 and MCL3 Studies
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Kirsten Grønbæk, Arne Kolstad, Lasse Sommer Kristensen, Christian H. Geisler, Sara Ek, Riikka Räty, Christophe Côme, Mette Dahl, Simon Husby, Mats Jerkeman, and Christian Winther Eskelund
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Mutation ,medicine.medical_treatment ,Immunology ,RNA ,Cancer ,RNA-Seq ,Cell Biology ,Hematology ,Biology ,medicine.disease ,medicine.disease_cause ,Biochemistry ,3. Good health ,Lymphoma ,Cancer immunotherapy ,Circular RNA ,medicine ,Cancer research ,Mantle cell lymphoma - Abstract
INTRODUCTION: Circular RNAs (circRNAs) are covalently closed endogenous RNA molecules with tissue- and disease specific expression patterns, that are emerging as potential diagnostic and prognostic biomarkers. These molecules exert diverse regulatory functions, and several studies have reported prognostic relevance and functional significance of circRNAs in cancer. However, no studies have yet examined the role of circRNAs in Mantle Cell Lymphoma (MCL). We have previously shown that the Nanostring nCounter technology enables specific, sensitive and accurate quantification of circRNAs in formalin-fixed, paraffin-embedded (FFPE) tissue samples from patients (Dahl et al, 2018). Here, we quantified circRNA expression in MCL tumors to address whether certain circRNAs could serve as prognostic markers in MCL. Samples were obtained from patients treated in the two Nordic clinical trials MCL2 and MCL3, all treated with immuno-chemotherapy and autologous stem cell transplant, which due to the improved prognosis observed with this regimen, remains the current standard of care. MATERIALS AND METHODS: We profiled the genome-wide circRNA expression in MCL using high-throughput RNA-sequencing (RNA-seq) of 14 diagnostic MCL samples, from which high-quality RNA from lymph nodes with MCL tumor infiltration was available. Based on these data, we designed assays for analyses of 41 differentially expressed circRNAs and quantified the expression using the NanoString nCounter technology. We examined the prognostic potential of individual circRNAs in a training cohort of 75 patients (MCL2) and confirmed these results in an independent, but similarly treated, validation cohort of 90 patients (MCL3). RESULTS: The total cohort consisted of 165 previously untreated MCL patients In our training cohort we identified seven circRNAs that were significantly associated with both progression-free survival (PFS), TTP, overall survival (OS) and lymphoma specific survival (LSS). We dichotomized expression values of each individual circRNA and examined the prognostic value in the validation cohort MCL3. Only one (circRAB11FIP1) of the seven circRNAs identified in MCL2 retained prognostic value in MCL3. As shown in Figure 1, univariate analysis revealed that low circRAB11FIP1 expression was significantly associated with TTP in MCL2 (HR=5.1, [2.5;10.4], p Finally, we performed a multivariate cox regression analysis of the entire cohort and found that circRAB11FIP1 was an independent prognostic factor for TTP, even when adjusting for MIPI and ki67-index (HR=2.36[1.3;4.4], p CONCLUSION: Our study showed that low circRAB11FIP1 was significantly associated with shorter TTP, even when adjusting for known prognostic factors, indicating that circRAB11FIP1 could play a specific role in the pathogenesis of MCL. CircRAB11FIP1 originates from exon 2 of the host gene RAB11-Family Interacting Protein 1 located on chromosome 8, and no studies have yet examined the functional role of this circRNA. Interestingly, we found that low circRAB11FIP1 was significantly associated with the presence of TP53 mutations. This warrants future studies to examine whether there is a functional link between circRAB11FIP1 and TP53 in MCL, which may help explain why patients with TP53 mutations have an exceedingly poor prognosis. Figure Disclosures Kolstad: Merck: Research Funding; Nordic Nanovector: Membership on an entity's Board of Directors or advisory committees, Research Funding. Jerkeman:Janssen: Honoraria, Research Funding; Gilead: Honoraria, Research Funding; Acerta: Honoraria, Research Funding; Celgene: Honoraria, Research Funding; Roche: Honoraria, Research Funding.
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- 2019
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20. Senescence Sensitivity of Breast Cancer Cells Is Defined by Positive Feedback Loop between CIP2A and E2F1
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Owen J. Sansom, Anchit Khanna, Jukka Westermarck, Gerard I. Evan, Pirkko-Liisa Kellokumpu-Lehtinen, Aleksandra Zwolinska, Mathias T. Rosenfeldt, Edward K. L. Chan, Veli-Matti Kähäri, Harri Sihto, Anni Laine, Minna Niemelä, Jean-Christophe Marine, Melissa R. Junttila, Christophe Côme, Kevin M. Ryan, and Heikki Joensuu
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Cyclin-Dependent Kinase Inhibitor p21 ,Senescence ,Blotting, Western ,Breast Neoplasms ,Mammary Neoplasms, Animal ,Docetaxel ,Biology ,Vinblastine ,Vinorelbine ,Autoantigens ,Article ,Mice ,Breast cancer ,Cell Line, Tumor ,medicine ,Animals ,Humans ,E2F1 ,Cellular Senescence ,Cell Proliferation ,Feedback, Physiological ,Mice, Knockout ,Reverse Transcriptase Polymerase Chain Reaction ,Cell growth ,Antinematodal Agents ,Intracellular Signaling Peptides and Proteins ,Membrane Proteins ,Fibroblasts ,Embryo, Mammalian ,HCT116 Cells ,medicine.disease ,Oncology ,Drug Resistance, Neoplasm ,Cell culture ,MCF-7 Cells ,Cancer research ,Female ,Taxoids ,Tumor Suppressor Protein p53 ,Cell aging ,E2F1 Transcription Factor ,medicine.drug - Abstract
Senescence induction contributes to cancer therapy responses and is crucial for p53-mediated tumor suppression. However, whether p53 inactivation actively suppresses senescence induction has been unclear. Here, we show that E2F1 overexpression, due to p53 or p21 inactivation, promotes expression of human oncoprotein CIP2A, which in turn, by inhibiting PP2A activity, increases stabilizing serine 364 phosphorylation of E2F1. Several lines of evidence show that increased activity of E2F1-CIP2A feedback renders breast cancer cells resistant to senescence induction. Importantly, mammary tumorigenesis is impaired in a CIP2A-deficient mouse model, and CIP2A-deficient tumors display markers of senescence induction. Moreover, high CIP2A expression predicts for poor prognosis in a subgroup of patients with breast cancer treated with senescence-inducing chemotherapy. Together, these results implicate the E2F1-CIP2A feedback loop as a key determinant of breast cancer cell sensitivity to senescence induction. This feedback loop also constitutes a promising prosenescence target for therapy of cancers with an inactivated p53–p21 pathway. Significance: It has been recently realized that most currently used chemotherapies exert their therapeutic effect at least partly by induction of terminal cell arrest, senescence. However, the mechanisms by which cell-intrinsic senescence sensitivity is determined are poorly understood. Results of this study identify the E2F1-CIP2A positive feedback loop as a key determinant of breast cancer cell sensitivity to senescence and growth arrest induction. Our data also indicate that this newly characterized interplay between 2 frequently overexpressed oncoproteins constitutes a promising prosenescence target for therapy of cancers with inactivated p53 and p21. Finally, these results may also facilitate novel stratification strategies for selection of patients to receive senescence-inducing cancer therapies. Cancer Discov; 3(2); 182–97. ©2013 AACR. This article is highlighted in the In This Issue feature, p. 125
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- 2013
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21. CIP2A promotes T-cell activation and immune response to Listeria monocytogenes infection
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Juan Antonio Aguilar-Pimentel, Valerie Gailus-Durner, Frauke Neff, Jukka Westermarck, Riitta Lahesmaa, Christophe Côme, Johannes Beckers, Byron B. Au-Yeung, Irina Treise, Marion Horsch, Martin Hrabě de Angelis, Markus Ollert, Anna Cvrljevic, Dirk H. Busch, Mohd Moin Khan, Zhi Chen, Sebastian Oeder, Thure Adler, Tero Aittokallio, Julia Calzada-Wack, Helmut Fuchs, Eleonora Sittig, Yiling Chen, Teemu D. Laajala, Institute for Molecular Medicine Finland, Tero Aittokallio / Principal Investigator, and Bioinformatics
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0301 basic medicine ,Male ,Physiology ,T-Lymphocytes ,Cancer Treatment ,lcsh:Medicine ,Gene Expression ,Lymphocyte Activation ,Pathology and Laboratory Medicine ,Autoantigens ,Mice ,White Blood Cells ,Animal Cells ,Immune Physiology ,Medicine and Health Sciences ,Cytotoxic T cell ,Listeriosis ,CATALYTIC-ACTIVITY ,lcsh:Science ,Immune Response ,Multidisciplinary ,Effector ,T Cells ,ZAP70 ,INHIBITOR ,PROTEIN PHOSPHATASE 2A ,Animal Models ,Acquired immune system ,CANCER ,3. Good health ,Cell biology ,APOPTOSIS ,PP2A ,medicine.anatomical_structure ,Oncology ,Female ,Cellular Types ,Research Article ,EXPRESSION ,T cell ,Immune Cells ,Immunology ,Cytotoxic T cells ,Mouse Models ,Biology ,Research and Analysis Methods ,ta3111 ,03 medical and health sciences ,Immune system ,Model Organisms ,Signs and Symptoms ,Immunity ,Diagnostic Medicine ,medicine ,KINASE ,Genetics ,Animals ,Blood Cells ,lcsh:R ,Membrane Proteins ,Biology and Life Sciences ,Protein phosphatase 2 ,Cell Biology ,Listeria monocytogenes ,Abscesses ,030104 developmental biology ,lcsh:Q ,3111 Biomedicine ,Spleen ,ONCOPROTEIN - Abstract
The oncoprotein Cancerous Inhibitor of Protein Phosphatase 2A ( CIP2A) is overexpressed in most malignancies and is an obvious candidate target protein for future cancer therapies. However, the physiological importance of CIP2A-mediated PP2A inhibition is largely unknown. As PP2A regulates immune responses, we investigated the role of CIP2A in normal immune system development and during immune response in vivo. We show that CIP2A-deficient mice (CIP2A(HOZ)) present a normal immune system development and function in unchallenged conditions. However when challenged with Listeria monocytogenes, CIP2A(HOZ) mice display an impaired adaptive immune response that is combined with decreased frequency of both CD4(+) T-cells and CD8(+) effector T-cells. Importantly, the cell autonomous effect of CIP2A deficiency for T-cell activation was confirmed. Induction of CIP2A expression during T-cell activation was dependent on Zap70 activity. Thus, we reveal CIP2A as a hitherto unrecognized mediator of T-cell activation during adaptive immune response. These results also reveal CIP2A(HOZ) as a possible novel mouse model for studying the role of PP2A activity in immune regulation. On the other hand, the results also indicate that CIP2A targeting cancer therapies would not cause serious immunological side-effects.
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- 2016
22. CIP2A Is Associated with Human Breast Cancer Aggressivity
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Johanna Ivaska, Olli Kallioniemi, Jukka Westermarck, Maïa Chanrion, Anni Laine, X. Liu, Simon Thezenas, Elina Mattila, Jean-Marie Darbon, Henrik Edgren, Jorma Isola, Jos Jonkers, and Christophe Côme
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Adult ,Cancer Research ,Pathology ,medicine.medical_specialty ,Genetic Linkage ,mRNA ,CA 15-3 ,Breast Neoplasms ,Autoantigens ,CIP2A ,Mice ,Breast cancer ,breast cancer ,SDG 3 - Good Health and Well-being ,medicine ,Tumor Cells, Cultured ,Animals ,Humans ,Neoplasm Invasiveness ,mRNA gene transcription ,Neoplasm Metastasis ,RNA, Small Interfering ,skin and connective tissue diseases ,Lymph node ,Aged ,Cell Proliferation ,Aged, 80 and over ,Messenger RNA ,Cell growth ,business.industry ,Carcinoma ,Intracellular Signaling Peptides and Proteins ,Cancer ,Membrane Proteins ,Protein phosphatase 2 ,Middle Aged ,medicine.disease ,Xenograft Model Antitumor Assays ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,Oncology ,Cancer research ,gene expression ,Female ,Breast disease ,business - Abstract
Purpose: To investigate the clinical relevance of the recently characterized human oncoprotein cancerous inhibitor of protein phosphatase 2A (CIP2A) in human breast cancer. Experimental Design: CIP2A expression (mRNA and protein) was measured in three different sets of human mammary tumors and compared with clinicopathologic variables. The functional role of CIP2A in breast cancer cells was evaluated by small interfering RNA–mediated depletion of the protein followed by an analysis of cell proliferation, migration, anchorage-independent growth, and xenograft growth. Results: CIP2A mRNA is overexpressed (n = 159) and correlates with higher Scarff-Bloom-Richardson grades (n = 251) in samples from two independent human breast cancer patients. CIP2A protein was found to be overexpressed in 39% of 33 human breast cancer samples. Furthermore, CIP2A mRNA expression positively correlated with lymph node positivity of the patients and with the expression of proliferation markers and p53 mutations in the tumor samples. Moreover, CIP2A protein expression was induced in breast cancer mouse models presenting mammary gland–specific depletion of p53 and either BRCA1 or BRCA2. Functionally, CIP2A depletion was shown to inhibit the expression of its target protein c-Myc. Loss of CIP2A also inhibited anchorage-independent growth in breast cancer cells. Finally, CIP2A was shown to support MDA-MB-231 xenograft growth in nude mice. Conclusions: Our data show that CIP2A is associated with clinical aggressivity in human breast cancer and promotes the malignant growth of breast cancer cells. Thus, these results validate the role of CIP2A as a clinically relevant human oncoprotein and warrant further investigation of CIP2A as a therapeutic target in breast cancer treatment. (Clin Cancer Res 2009;15(16):5092–100)
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- 2009
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23. Cox4i2, Ifit2, and Prdm11 Mutant Mice: Effective Selection of Genes Predisposing to an Altered Airway Inflammatory Response from a Large Compendium of Mutant Mouse Lines
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Anders H. Lund, Martin Hrabĕ de Angelis, Juan Antonio Aguilar-Pimentel, Christophe Côme, Valerie Gailus-Durner, Maik Hüttemann, Helmut Fuchs, Johannes Beckers, Marion Horsch, Klaus T. Jensen, Icksoo Lee, Christopher Sinkler, Lawrence I. Grossman, Cathrine Kolster-Fog, Clemens Bönisch, Markus Ollert, and Erwin Bohn
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Ovalbumin ,T cell ,Mutant ,Respiratory Tract Diseases ,lcsh:Medicine ,Immunoglobulins ,Biology ,Lymphocyte Activation ,Transcriptome ,Mice ,Immune system ,medicine ,Animals ,Genetic Predisposition to Disease ,Selection, Genetic ,lcsh:Science ,B cell ,Inflammation ,Multidisciplinary ,Gene Expression Profiling ,lcsh:R ,Wild type ,Proteins ,RNA-Binding Proteins ,Molecular Sequence Annotation ,respiratory system ,Immunoglobulin E ,Molecular biology ,Phenotype ,ddc ,Gene expression profiling ,Disease Models, Animal ,medicine.anatomical_structure ,Immunology ,Mutation ,Cytokines ,lcsh:Q ,Female ,Apoptosis Regulatory Proteins ,Carrier Proteins ,Bronchoalveolar Lavage Fluid ,Transcription Factors ,Research Article - Abstract
We established a selection strategy to identify new models for an altered airway inflammatory response from a large compendium of mutant mouse lines that were systemically phenotyped in the German Mouse Clinic (GMC). As selection criteria we included published gene functional data, as well as immunological and transcriptome data from GMC phenotyping screens under standard conditions. Applying these criteria we identified a few from several hundred mutant mouse lines and further characterized the Cox4i2tm1Hutt, Ifit2tm1.1Ebsb, and Prdm11tm1.1ahl lines following ovalbumin (OVA) sensitization and repeated OVA airway challenge. Challenged Prdm11tm1.1ahl mice exhibited changes in B cell counts, CD4+ T cell counts, and in the number of neutrophils in bronchoalveolar lavages, whereas challenged Ifit2tm1.1Ebsb mice displayed alterations in plasma IgE, IgG1, IgG3, and IgM levels compared to the challenged wild type littermates. In contrast, challenged Cox4i2tm1Hutt mutant mice did not show alterations in the humoral or cellular immune response compared to challenged wild type mice. Transcriptome analyses from lungs of the challenged mutant mouse lines showed extensive changes in gene expression in Prdm11tm1.1ahl mice. Functional annotations of regulated genes of all three mutant mouse lines were primarily related to inflammation and airway smooth muscle (ASM) remodeling. We were thus able to define an effective selection strategy to identify new candidate genes for the predisposition to an altered airway inflammatory response under OVA challenge conditions. Similar selection strategies may be used for the analysis of additional genotype - envirotype interactions for other diseases.
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- 2015
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24. The homeotic protein dlk is expressed during peripheral nerve development
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Christophe Côme, Jérôme Salles, Claude Cassagne, Anja Knoll-Gellida, Patricia Costaglioli, Bertrand Garbay, Unité de Nutrition Humaine (UNH), Université Clermont Auvergne [2017-2020] (UCA [2017-2020])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Université de Bordeaux Ségalen [Bordeaux 2], Laboratoire de biogenèse membranaire (LBM), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), and Institut National de la Recherche Agronomique (INRA)-Université d'Auvergne - Clermont-Ferrand I (UdA)-Clermont Université
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Nervous system ,[SDV]Life Sciences [q-bio] ,Biochemistry ,Mice ,Myelin ,0302 clinical medicine ,Structural Biology ,delta-like protein ,MESH: Gene Expression Regulation, Developmental ,Gene expression ,Schwann cells ,MESH: Animals ,DNA array ,Oligonucleotide Array Sequence Analysis ,MESH: Mice, Neurologic Mutants ,0303 health sciences ,biology ,nervous system ,Intracellular Signaling Peptides and Proteins ,Gene Expression Regulation, Developmental ,myelination ,Cell Differentiation ,differentiation ,Trembler ,Sciatic Nerve ,Phenotype ,MESH: Sciatic Nerve ,medicine.anatomical_structure ,Peripheral nervous system ,MESH: Membrane Proteins ,Homeotic gene ,Myelin Proteins ,MESH: Cell Differentiation ,MESH: Mutation ,Biophysics ,Schwann cell ,MESH: Phenotype ,Schwann cellsc ,Mice, Neurologic Mutants ,MESH: Gene Expression Profiling ,03 medical and health sciences ,MESH: Mice, Inbred C57BL ,MESH: Intracellular Signaling Peptides and Proteins ,MESH: Homeodomain Proteins ,Genetics ,medicine ,Animals ,MESH: Blotting, Northern ,MESH: Myelin Proteins ,RNA, Messenger ,MESH: Mice ,Molecular Biology ,MESH: RNA, Messenger ,030304 developmental biology ,Homeodomain Proteins ,Gene Expression Profiling ,Membrane Proteins ,Cell Biology ,Blotting, Northern ,biology.organism_classification ,Molecular biology ,Mice, Inbred C57BL ,Mutation ,MESH: Oligonucleotide Array Sequence Analysis ,MESH: Schwann Cells ,cDNA array ,030217 neurology & neurosurgery - Abstract
International audience; To investigate the molecular events controlling myelination of the peripheral nervous system, we compared gene expression of normal mouse sciatic nerves to that of the trembler mouse, whose Schwann cells are blocked in a pre-myelinating phenotype. Using cDNA array, we assessed expression levels of 1176 genes, and we found that delta-like protein (dlk), an epidermal growth factor-like homeotic protein, was expressed in the normal developing nerves, but at a low level in the dysmyelinating mutant trembler. Moreover, dlk expression was down-regulated when myelin protein expression was up-regulated, and no expression was observed in the developing brain. These results suggest that dlk expression is required for Schwann cell acquisition of the myelinating phenotype.
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- 2001
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25. Serine 62-Phosphorylated MYC Associates with Nuclear Lamins and Its Regulation by CIP2A Is Essential for Regenerative Proliferation
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Kevin Myant, Tuuli Halonen, Erinn Lee Ogg, John W. Cassidy, Anni Laine, Tiina Laiterä, Rosalie C. Sears, Mahnaz Janghorban, Jukka Westermarck, Owen J. Sansom, Christophe Côme, Juha Klefström, Johanna I. Partanen, Juha Okkeri, Xi Qiao, Patrizia Cammareri, Research Programs Unit, Medicum, Department of Biochemistry and Developmental Biology, Juha Klefström / Principal Investigator, and Translational Cancer Biology (TCB) Research Programme
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CANCER-THERAPY ,DNA damage ,Biology ,Autoantigens ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Article ,Serine ,Proto-Oncogene Proteins c-myc ,03 medical and health sciences ,Mice ,0302 clinical medicine ,medicine ,C-MYC ,Animals ,Phosphorylation ,lcsh:QH301-705.5 ,030304 developmental biology ,Regulation of gene expression ,Cell Nucleus ,0303 health sciences ,GENE-REGULATION ,ta1182 ,Membrane Proteins ,PROTEIN PHOSPHATASE 2A ,INTESTINAL REGENERATION ,Protein phosphatase 2 ,Lamin Type A ,Immunohistochemistry ,Gene Expression Regulation, Neoplastic ,Cell nucleus ,APC DEFICIENCY ,medicine.anatomical_structure ,lcsh:Biology (General) ,030220 oncology & carcinogenesis ,Cancer research ,Nuclear lamina ,CELL-GROWTH ,3111 Biomedicine ,STEM-CELLS ,Lamin ,ONCOPROTEIN - Abstract
An understanding of the mechanisms determining MYC's transcriptional and proliferation-promoting activities in vivo could facilitate approaches for MYC targeting. However, post-translational mechanisms that control MYC function in vivo are poorly understood. Here, we demonstrate that MYC phosphorylation at serine 62 enhances MYC accumulation on Lamin A/C-associated nuclear structures and that the protein phosphatase 2A (PP2A) inhibitor protein CIP2A is required for this process. CIP2A is also critical for serum-induced MYC phosphorylation and for MYC-elicited proliferation induction in vitro. Complementary transgenic approaches and an intestinal regeneration model further demonstrated the in vivo importance of CIP2A and serine 62 phosphorylation for MYC activity upon DNA damage. However, targeting of CIP2A did not influence the normal function of intestinal crypt cells. These data underline the importance of nuclear organization in the regulation of MYC phosphorylation, leading to an in vivo demonstration of a strategy for inhibiting MYC activity without detrimental physiological effects.
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- 2013
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26. PRDM11 is dispensable for the maintenance and function of hematopoietic stem and progenitor cells
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Cathrine K. Fog, Klaus T. Jensen, Christophe Côme, Bo T. Porse, Lina Thorén, Anders H. Lund, and Natalija Buza-Vidas
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Bone Marrow Cells ,Biology ,Mice ,medicine ,Animals ,Progenitor cell ,Transcription factor ,Bone Marrow Transplantation ,PRDM16 ,Medicine(all) ,Mice, Knockout ,Platelet Count ,Stem Cells ,General Medicine ,Cell Biology ,Hematopoietic Stem Cells ,Phenotype ,Cell biology ,Transplantation ,Repressor Proteins ,Haematopoiesis ,medicine.anatomical_structure ,Immunology ,Bone marrow ,Stem cell ,Carrier Proteins ,Megakaryocytes ,Biomarkers ,Whole-Body Irradiation ,Developmental Biology ,Transcription Factors - Abstract
Hematopoietic stem cells (HSC)11Hematopoietic stem cell (HSC), hematopoietic stem and progenitor cell (HSPC), bone marrow (BM), bone marrow transplantation (BMT), acute myeloid leukemia (AML), peripheral blood (PB), multipotent progenitor (MPP), pre-megakaryocyte/erythroid (preMegE), megakaryocytic progenitor (MkP), pre-granulocyte/macrophage (preGM), granulocyte/macrophage progenitors (GMP), common lymphoid progenitors (CLP), colony forming unit erythroid (CFU-E), proErythroid (proE), colony forming unit megakaryocyte (CFU-Mk), colony forming unit granulocyte macrophage (CFU-GM), megakaryocyte (Mk), LSK (Lineage−, Sca1+, c-Kithi). supply organisms with life-long output of mature blood cells. To do so, the HSC pool size has to be maintained by HSC self-renewing divisions. PRDM3 and PRDM16 have been documented to regulate HSC self-renewal, maintenance and function. We found Prdm11 to have similar expression patterns in the hematopoietic stem and progenitor cell (HSPC) compartments as Prdm3 and Prdm16. Therefore, we undertook experiments to test if PRDM11 regulates HSC self-renewal, maintenance and function by investigating the Prdm11−/− mice. Our data shows that phenotypic HSPCs are intact in bone marrow (BM) of one-year-old Prdm11−/− mice. In addition, Prdm11−/− mice were able to fully regenerate the hematopoietic system upon BM transplantation (BMT) into lethally irradiated mice with a mild drop in lymphoid output only. Taken together, this suggests that PRDM11, in contrast to PRDM3 and PRDM16, is not directly involved in regulation of HSPCs in mice.
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- 2012
27. Slug Controls Stem/Progenitor Cell Growth Dynamics during Mammary Gland Morphogenesis
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Pierre Savagner, Maria-Luisa M. Faraldo, Ysia Idoux-Gillet, Christophe Côme, Abdelkader Selmi, Mayssa Nassour, Marie-Ange Deugnier, Institut de recherche en cancérologie de Montpellier (IRCM - U896 Inserm - UM1), Université Montpellier 1 (UM1)-CRLCC Val d'Aurelle - Paul Lamarque-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM), Compartimentation et dynamique cellulaires (CDC), Centre National de la Recherche Scientifique (CNRS)-Institut Curie [Paris]-Université Pierre et Marie Curie - Paris 6 (UPMC), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Curie [Paris]-Centre National de la Recherche Scientifique (CNRS), and Le Ster, Yves
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Anatomy and Physiology ,Cellular differentiation ,lcsh:Medicine ,Biochemistry ,Cell Fate Determination ,Mice ,0302 clinical medicine ,Reproductive Physiology ,Cell Movement ,Molecular Cell Biology ,Morphogenesis ,Pattern Formation ,lcsh:Science ,[SDV.BDD]Life Sciences [q-bio]/Development Biology ,0303 health sciences ,Multidisciplinary ,Stem Cells ,Cell migration ,Cell Differentiation ,Cadherins ,Slug ,Cell biology ,Adult Stem Cells ,mammary tubulogenesis ,030220 oncology & carcinogenesis ,embryonic structures ,Female ,Stem cell ,Cellular Types ,Growth factors ,Research Article ,Cell Physiology ,Induced Pluripotent Stem Cells ,epithelial-mesenchymal transition ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Cell Migration ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,Biology ,cell motility ,Cell Growth ,03 medical and health sciences ,Mammary Glands, Animal ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,DNA-binding proteins ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,Cell Adhesion ,Animals ,Epithelial–mesenchymal transition ,Progenitor cell ,[SDV.BC] Life Sciences [q-bio]/Cellular Biology ,030304 developmental biology ,Cell Proliferation ,lcsh:R ,Reproductive System ,Proteins ,Epithelial Cells ,biology.organism_classification ,Cytoskeletal proteins ,stem cell ,lcsh:Q ,Snail Family Transcription Factors ,Mammary gland morphogenesis ,Developmental Biology ,Transcription Factors - Abstract
International audience; BACKGROUND: Morphogenesis results from the coordination of distinct cell signaling pathways controlling migration, differentiation, apoptosis, and proliferation, along stem/progenitor cell dynamics. To decipher this puzzle, we focused on epithelial-mesenchymal transition (EMT) "master genes". EMT has emerged as a unifying concept, involving cell-cell adhesion, migration and apoptotic pathways. EMT also appears to mingle with stemness. However, very little is known on the physiological role and relevance of EMT master-genes. We addressed this question during mammary morphogenesis. Recently, a link between Slug/Snai2 and stemness has been described in mammary epithelial cells, but EMT master genes actual localization, role and targets during mammary gland morphogenesis are not known and we focused on this basic question. METHODOLOGY/PRINCIPAL FINDINGS: Using a Slug-lacZ transgenic model and immunolocalization, we located Slug in a distinct subpopulation covering about 10-20% basal cap and duct cells, mostly cycling cells, coexpressed with basal markers P-cadherin, CK5 and CD49f. During puberty, Slug-deficient mammary epithelium exhibited a delayed development after transplantation, contained less cycling cells, and overexpressed CK8/18, ER, GATA3 and BMI1 genes, linked to luminal lineage. Other EMT master genes were overexpressed, suggesting compensation mechanisms. Gain/loss-of-function in vitro experiments confirmed Slug control of mammary epithelial cell luminal differentiation and proliferation. In addition, they showed that Slug enhances specifically clonal mammosphere emergence and growth, cell motility, and represses apoptosis. Strikingly, Slug-deprived mammary epithelial cells lost their potential to generate secondary clonal mammospheres. CONCLUSIONS/SIGNIFICANCE: We conclude that Slug pathway controls the growth dynamics of a subpopulation of cycling progenitor basal cells during mammary morphogenesis. Overall, our data better define a key mechanism coordinating cell lineage dynamics and morphogenesis, and provide physiological relevance to broadening EMT pathways.
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- 2012
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28. Abstract PR03: Serine 62 phosphorylated MYC associates with nuclear lamins and its regulation by CIP2A is essential for proliferation induction in vivo
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Kevin Myant, Christophe Côme, Anni Laine, Tuuli Halonen, Tiina Laiterä, Owen J. Sansom, Jukka Westermarck, Mahnaz Janghorban, Juha Klefström, Xi Qiao, Johanna I. Partanen, Rosalie C. Sears, Erinn-Lee Ogg, and Juha Okkeri
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Cancer Research ,Transgene ,Protein phosphatase 2 ,Biology ,In vitro ,3. Good health ,Serine ,Oncology ,In vivo ,Cancer research ,Nuclear lamina ,Phosphorylation ,Molecular Biology ,Lamin - Abstract
Targeting MYC function would be highly desirable for hyperproliferative diseases. As MYC itself is refractory to direct chemical inhibition, understanding of the mechanisms determining MYC's transcriptional and proliferation promoting activities in vivo would be critical for generation of alternative targeting strategies. However, despite 30 years of research, it is very poorly documented what post-translational mechanisms control MYC function in vivo. Here we demonstrate for the first time that Lamin A/C association is critical for MYC phosphorylation regulation. MYC phosphorylation at serine 62 enhances MYC recruitment to Lamin A/C-associated nuclear structures and the Protein Phosphatase 2A (PP2A) inhibitor protein CIP2A is required for retaining this phosphorylation and localization. CIP2A is also critical for serum induced MYC phosphorylation, and for MYC-elicited proliferation induction in vitro. Critically, using complementary transgenic approaches, and intestinal regeneration model, we demonstrate the in vivo importance of this mechanism for MYC´s transcriptional and proliferation promoting activities. However, targeting of this mechanism does not influence basal proliferation, or differentiation of intestinal crypt cells or mouse well-being. Together we discover unprecedented importance of nuclear organization of MYC for its phosphorylation regulation; leading to in vivo demonstration of a strategy for targeting of MYC activity without detrimental physiological effects. Citation Format: Kevin Myant, Xi Qiao, Tuuli Halonen, Christophe Come, Anni Laine, Johanna I. Partanen, Erinn-Lee Ogg, Tiina Laiterä, Mahnaz Janghorban, Juha Okkeri, Juha Klefström, Rosalie C. Sears, Owen J. Sansom, Jukka Westermarck. Serine 62 phosphorylated MYC associates with nuclear lamins and its regulation by CIP2A is essential for proliferation induction in vivo. [abstract]. In: Proceedings of the AACR Special Conference on Myc: From Biology to Therapy; Jan 7-10, 2015; La Jolla, CA. Philadelphia (PA): AACR; Mol Cancer Res 2015;13(10 Suppl):Abstract nr PR03.
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- 2015
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29. Snail and slug play distinct roles during breast carcinoma progression
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Pierre Savagner, Karl-Friedrich Becker, Frédéric Bibeau, Fabrice Magnino, Christophe Côme, Charles Theillet, Pascal De Santa Barbara, Institut de génétique humaine (IGH), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Institut fuer Pathologie, Klinikum rechts der Isar der Technischen Universitaet, Genotypes et Phenotypes Tumoraux, Université Montpellier 1 (UM1)-Institut National de la Santé et de la Recherche Médicale (INSERM), INSERM, CRLC Val d'Aurelle-Paul Lamarque, Fondation de France (F. M.), Ligue Régionale contre le Cancer (Languedoc-Roussillon) (C.C.) and Groupement des Entreprises Francaises dans la lutte contre le Cancer (Montpellier-Languedoc-Roussillon), Deutsche Krebshilfe-Special program on cancer invasion (KFB)., and Le Ster, Yves
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MESH: Carcinoma ,Cancer Research ,Pathology ,Statistics as Topic ,Gene Expression ,Vimentin ,MESH: Lymph Nodes ,Snail ,MESH: Mammary Glands, Human ,MESH: Vimenti ,MESH: Cadherins ,Mice ,0302 clinical medicine ,Gene expression ,Tumor Cells, Cultured ,MESH: Animals ,[SDV.BDD]Life Sciences [q-bio]/Development Biology ,0303 health sciences ,biology ,Carcinoma, Ductal, Breast ,MESH: Transcription Factors ,Cadherins ,Slug ,Phenotype ,Oncology ,030220 oncology & carcinogenesis ,embryonic structures ,Disease Progression ,MESH: Disease Progression ,MESH: Statistics ,medicine.medical_specialty ,Stromal cell ,animal structures ,MESH: Gene Expression ,invasiveness ,Breast Neoplasms ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,In situ hybridization ,MESH: Phenotype ,Breast Carcinoma ,03 medical and health sciences ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,biology.animal ,[SDV.BDD] Life Sciences [q-bio]/Development Biology ,parasitic diseases ,Carcinoma ,medicine ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Animals ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,MESH: Tumor Cells, Cultured ,Mammary Glands, Human ,MESH: Mice ,030304 developmental biology ,MESH: Humans ,Cadherin ,fungi ,E-cadherin ,medicine.disease ,biology.organism_classification ,MESH: Carcinoma, Ductal, Breast ,biology.protein ,Cancer research ,Lymph Nodes ,Snail Family Transcription Factors ,Stromal Cells ,MESH: Stromal Cells ,MESH: Breast Neoplasms ,Transcription Factors - Abstract
Purpose: Carcinoma progression is linked to a partially dedifferentiated epithelial cell phenotype. As previously suggested, this regulation could involve transcription factors, Snail and Slug, known to promote epithelial-mesenchymal transitions during development. Here, we investigate the role of Snail and Slug in human breast cancer progression. Experimental Design: We analyzed Snail, Slug, and E-cadherin RNA expression levels and protein localization in large numbers of transformed cell lines and breast carcinomas, examined the correlation with tumor histologic features, and described, at the cellular level, Snail and Slug localization in carcinomas using combined in situ hybridization and immunolocalization. Results: In contrast with transformed cell lines, Slug was found to colocalize with E-cadherin at the cellular level in normal mammary epithelial cells and all tested carcinomas. Snail also colocalized at the cellular level with E-cadherin in tumors expressing high levels of Snail RNA. In addition, Snail was significantly expressed in tumor stroma, varying with tumors. Slug and Snail genes were significantly overexpressed in tumors associated with lymph node metastasis. Finally, the presence of semidifferentiated tubules within ductal carcinomas was linked to Slug expression levels similar to or above normal breast samples. Conclusions: These results suggest that Snail or Slug expression in carcinoma cells does not generally preclude significant E-cadherin expression. They emphasize a link between Snail, Slug, and lymph node metastasis in a large sampling of mammary carcinomas, and suggest a role for Slug in the maintenance of semidifferentiated structures. Snail and Slug proteins seem to support distinct tumor invasion modes and could provide new therapeutic targets.
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- 2006
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30. Cutaneous Wound Reepithelialization
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Pierre Savagner, Valérie Arnoux, D.F. Kusewitt, Christophe Côme, and Laurie G. Hudson
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Basement membrane ,integumentary system ,Epidermis (botany) ,Keratinocyte activation ,Cell biology ,Extracellular matrix ,chemistry.chemical_compound ,medicine.anatomical_structure ,chemistry ,Tumor progression ,medicine ,Hepatocyte growth factor ,Keratinocyte growth factor ,Wound healing ,medicine.drug - Abstract
Successful cutaneous wound repair occurs in a series of tightly coordinated and overlapping steps: (1) inflammation and clot formation, (2) keratinocyte activation and migration, (3) remodeling of the basement membrane and extracellular matrix, and (4) dermal and epidermal maturation. During the final three stages of cutaneous wound healing, restoration of an intact epidermis occurs via a complex process termed reepithelialization. In this chapter, we focus on the process of wound reepithelialization, emphasizing the resemblance of reepithelialization to epithelial-mesenchymal transition (EMT) occurring during development and tumor progression. Based on the many morphologic and molecular similarities between the two processes, we propose that wound reepithelialization represents a partial and reversible EMT.
- Published
- 2005
- Full Text
- View/download PDF
31. Twist, a master regulator of morphogenesis, plays an essential role in tumor metastasis
- Author
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Robert A. Weinberg, Pierre Savagner, Andrea L. Richardson, Raphael Itzykson, Sridhar Ramaswamy, Sendurai A. Mani, Jing Yang, Christophe Côme, Inna Gitelman, and Joana Liu Donaher
- Subjects
Lung Neoplasms ,Cellular differentiation ,Morphogenesis ,Breast Neoplasms ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Metastasis ,Cell Line ,Mesoderm ,Twist transcription factor ,Mice ,Cell Movement ,Cell Line, Tumor ,Embryonic morphogenesis ,Carcinoma ,medicine ,Animals ,Humans ,Neoplasm Invasiveness ,RNA, Messenger ,Neoplasm Metastasis ,RNA, Small Interfering ,Luciferases ,Mice, Inbred BALB C ,Biochemistry, Genetics and Molecular Biology(all) ,Twist-Related Protein 1 ,Mammary Neoplasms, Experimental ,Nuclear Proteins ,Epithelial Cells ,Organ Size ,medicine.disease ,Cadherins ,Gene Expression Regulation, Neoplastic ,Repressor Proteins ,Carcinoma, Lobular ,Myogenic Regulatory Factors ,Immunology ,Cancer cell ,Cancer research ,Ectopic expression ,Female ,Neoplasm Transplantation ,Transcription Factors - Abstract
Metastasis is a multistep process during which cancer cells disseminate from the site of primary tumors and establish secondary tumors in distant organs. In a search for key regulators of metastasis in a murine breast tumor model, we have found that the transcription factor Twist, a master regulator of embryonic morphogenesis, plays an essential role in metastasis. Suppression of Twist expression in highly metastatic mammary carcinoma cells specifically inhibits their ability to metastasize from the mammary gland to the lung. Ectopic expression of Twist results in loss of E-cadherin-mediated cell-cell adhesion, activation of mesenchymal markers, and induction of cell motility, suggesting that Twist contributes to metastasis by promoting an epithelial-mesenchymal transition (EMT). In human breast cancers, high level of Twist expression is correlated with invasive lobular carcinoma, a highly infiltrating tumor type associated with loss of E-cadherin expression. These results establish a mechanistic link between Twist, EMT, and tumor metastasis.
- Published
- 2003
32. Roles of the Transcription Factors Snail and Slug During Mammary Morphogenesis and Breast Carcinoma Progression.
- Author
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Christophe Côme, Valérie Arnoux, Frédéric Bibeau, and Pierre Savagner
- Abstract
The zinc-finger transcription factors Snail and Slug are involved in different processes controlling cell differentiation and apoptosis. They also appear to be involved in tumor progression. Their putative involvement in mammary gland development has not been specifically examined so far. Slug is expressed at a significant level in normal breast, and indirect evidence suggests it could be implicated in tubulogenesis. As an antiapoptotic agent, it could also protect epithelial cells from death during ductal lumen formation and during breast involution. In breast carcinomas, Snail transcription factors have been linked to tumor progression and invasiveness. Possible mechanisms include repression of the E-cadherin gene by Snail or Slug. However, it is not clear how this transcriptional activity is implicated in vivo. Other possible mechanisms involve maintenance of a plastic phenotype by Slug that could participate in local invasion of ductal carcinomas, and interference with apoptotic pathways that could contribute to global tumor growth and radioresistance. These processes probably also involve interactions with estrogen, EGF, or c-kit pathways. [ABSTRACT FROM AUTHOR]
- Published
- 2004
33. Serine 62-Phosphorylated MYC Associates with Nuclear Lamins and Its Regulation by CIP2A Is Essential for Regenerative Proliferation
- Author
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Kevin Myant, Xi Qiao, Tuuli Halonen, Christophe Come, Anni Laine, Mahnaz Janghorban, Johanna I. Partanen, John Cassidy, Erinn-Lee Ogg, Patrizia Cammareri, Tiina Laiterä, Juha Okkeri, Juha Klefström, Rosalie C. Sears, Owen J. Sansom, and Jukka Westermarck
- Subjects
Biology (General) ,QH301-705.5 - Abstract
An understanding of the mechanisms determining MYC’s transcriptional and proliferation-promoting activities in vivo could facilitate approaches for MYC targeting. However, post-translational mechanisms that control MYC function in vivo are poorly understood. Here, we demonstrate that MYC phosphorylation at serine 62 enhances MYC accumulation on Lamin A/C-associated nuclear structures and that the protein phosphatase 2A (PP2A) inhibitor protein CIP2A is required for this process. CIP2A is also critical for serum-induced MYC phosphorylation and for MYC-elicited proliferation induction in vitro. Complementary transgenic approaches and an intestinal regeneration model further demonstrated the in vivo importance of CIP2A and serine 62 phosphorylation for MYC activity upon DNA damage. However, targeting of CIP2A did not influence the normal function of intestinal crypt cells. These data underline the importance of nuclear organization in the regulation of MYC phosphorylation, leading to an in vivo demonstration of a strategy for inhibiting MYC activity without detrimental physiological effects.
- Published
- 2015
- Full Text
- View/download PDF
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