11 results on '"Chowdhury, M.E.H."'
Search Results
2. Optimizing transparent photovoltaic integration with battery energy storage systems in greenhouse: a daily light integral-constrained economic analysis considering BESS degradation
- Author
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Gholami, Mohammadreza, Arefi, A., Chowdhury, M.E.H., Ben-Brahim, L., and Muyeen, S.M.
- Published
- 2025
- Full Text
- View/download PDF
3. Tracking head movement inside an MR scanner using electromagnetic coils
- Author
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Bhuiyan, E.H., Chowdhury, M.E.H., and Glover, P.M.
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- 2024
- Full Text
- View/download PDF
4. Feasibility of tracking involuntary head movement for MRI using a coil as a magnetic dipole in a time-varying gradient
- Author
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Bhuiyan, E.H., primary, Chowdhury, M.E.H., additional, and Glover, P.M., additional
- Published
- 2023
- Full Text
- View/download PDF
5. Deep learning assisted automated assessment of thalassaemia from haemoglobin electrophoresis images
- Author
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Ullah, Azmat, Salman, Khan M.; Khan, K.N.; Riaz, H.; Yousafzai, Y.M.; Rahman, T.; Chowdhury, M.E.H.; Abul Kashem, S.B., Graduate School of Sciences and Engineering, Department of Biomedical Sciences and Engineering, Ullah, Azmat, Salman, Khan M.; Khan, K.N.; Riaz, H.; Yousafzai, Y.M.; Rahman, T.; Chowdhury, M.E.H.; Abul Kashem, S.B., Graduate School of Sciences and Engineering, and Department of Biomedical Sciences and Engineering
- Abstract
Haemoglobin (Hb) electrophoresis is a method of blood testing used to detect thalassaemia. However, the interpretation of the result of the electrophoresis test itself is a complex task. Expert haematologists, specifically in developing countries, are relatively few in number and are usually overburdened. To assist them with their workload, in this paper we present a novel method for the automated assessment of thalassaemia using Hb electrophoresis images. Moreover, in this study we compile a large Hb electrophoresis image dataset, consisting of 103 strips containing 524 electrophoresis images with a clear consensus on the quality of electrophoresis obtained from 824 subjects. The proposed methodology is split into two parts: (1) single-patient electrophoresis image segmentation by means of the lane extraction technique, and (2) binary classification (normal or abnormal) of the electrophoresis images using state-of-the-art deep convolutional neural networks (CNNs) and using the concept of transfer learning. Image processing techniques including filtering and morphological operations are applied for object detection and lane extraction to automatically separate the lanes and classify them using CNN models. Seven different CNN models (ResNet18, ResNet50, ResNet101, InceptionV3, DenseNet201, SqueezeNet and MobileNetV2) were investigated in this study. InceptionV3 outperformed the other CNNs in detecting thalassaemia using Hb electrophoresis images. The accuracy, precision, recall, f1-score, and specificity in the detection of thalassaemia obtained with the InceptionV3 model were 95.8%, 95.84%, 95.8%, 95.8% and 95.8%, respectively. MobileNetV2 demonstrated an accuracy, precision, recall, f1-score, and specificity of 95.72%, 95.73%, 95.72%, 95.7% and 95.72% respectively. Its performance was comparable with the best performing model, InceptionV3. Since it is a very shallow network, MobileNetV2 also provides the least latency in processing a single-patient image and it can, A part of the research was funded by the Higher Education Commission of Pakistan through its funded project of Artificial Intelligence in Healthcare, Intelligent Information Processing Lab, National Center of Artificial Intelligence.
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- 2022
6. Development and Validation of an Early Scoring System for Prediction of Disease Severity in COVID-19 Using Complete Blood Count Parameters
- Author
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Rahman, T., Khandakar, A., Hoque, M.E., Ibtehaz, N., Kashem, S.B., Masud, R., Shampa, L., Hasan, M.M., Islam, M.T., Al-Maadeed, S., Zughaier, S.M., Badran, S., Doi, S.A.R., and Chowdhury, M.E.H.
- Subjects
Cells ,Decision trees ,Multivariate logistic regressions ,Logistic regression ,Area under the curves ,Hospitals ,Blood ,Complete blood counts ,Risks ,White blood cells ,Selection techniques ,Prognostic model ,Biomarkers ,Forecasting ,Clinical assessments ,Hospital admissions - Abstract
The coronavirus disease 2019 (COVID-19) after outbreaking in Wuhan increasingly spread throughout the world. Fast, reliable, and easily accessible clinical assessment of the severity of the disease can help in allocating and prioritizing resources to reduce mortality. The objective of the study was to develop and validate an early scoring tool to stratify the risk of death using readily available complete blood count (CBC) biomarkers. A retrospective study was conducted on twenty-three CBC blood biomarkers for predicting disease mortality for 375 COVID-19 patients admitted to Tongji Hospital, China from January 10 to February 18, 2020. Machine learning based key biomarkers among the CBC parameters as the mortality predictors were identified. A multivariate logistic regression-based nomogram and a scoring system was developed to categorize the patients in three risk groups (low, moderate, and high) for predicting the mortality risk among COVID-19 patients. Lymphocyte count, neutrophils count, age, white blood cell count, monocytes (%), platelet count, red blood cell distribution width parameters collected at hospital admission were selected as important biomarkers for death prediction using random forest feature selection technique. A CBC score was devised for calculating the death probability of the patients and was used to categorize the patients into three sub-risk groups: low (5% and 50%), respectively. The area under the curve (AUC) of the model for the development and internal validation cohort were 0.961 and 0.88, respectively. The proposed model was further validated with an external cohort of 103 patients of Dhaka Medical College, Bangladesh, which exhibits in an AUC of 0.963. The proposed CBC parameter-based prognostic model and the associated web-application, can help the medical doctors to improve the management by early prediction of mortality risk of the COVID-19 patients in the low-resource countries. This work was supported by Qatar National Research Fund (QNRF) under Grant UREP28-144-3-046 and Qatar University Emergency Response Grant (QUERG-CENG-2020-1) through Qatar University. Open Access publication is funded by Qatar National Library (QNL). Scopus
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- 2021
7. Multimodal EEG and Keystroke Dynamics Based Biometric System Using Machine Learning Algorithms
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Rahman A., Chowdhury M.E.H., Khandakar A., Kiranyaz, Mustafa Serkan, Zaman K.S., Reaz M.B.I., Islam M.T., Ezeddin M., and Kadir M.A.
- Subjects
Authentication ,Binary template matching ,Template matching ,Decision trees ,Multimodal biometric systems ,Multi-domain features ,Biomedical signal processing ,Electroencephalography ,Turing machines ,Learning algorithms ,Signal variability ,Dynamics ,Electrophysiology ,Biometric identifications ,Physiological condition ,Biometrics ,Machine learning ,Random forest classifier ,Feature extraction ,Machine learning classification - Abstract
Electroencephalography (EEG) based biometric systems are gaining attention for their anti-spoofing capability but lack accuracy due to signal variability at different psychological and physiological conditions. On the other hand, keystroke dynamics-based systems achieve very high accuracy but have low anti-spoofing capability. To address these issues, a novel multimodal biometric system combining EEG and keystroke dynamics is proposed in this paper. A dataset was created by acquiring both keystroke dynamics and EEG signals simultaneously from 10 users. Each user participated in 500 trials at 10 different sessions (days) to replicate real-life signal variability. A machine learning classification pipeline is developed using multi-domain feature extraction (time, frequency, time-frequency), feature selection (Gini impurity), classifier design, and score level fusion. Different classifiers were trained, validated, and tested for two different classification experiments-personalized and generalized. For identification and authentication, 99.9% and 99.6% accuracies are achieved, respectively for the Random Forest classifier in 5 fold cross-validation. These results outperform the individual modalities with a significant margin (5%). We also developed a binary template matching-based algorithm, which gives 93.64% accuracy 6X faster. The proposed method can be considered secure and reliable for any kind of biometric identification and authentication. Scopus
- Published
- 2021
8. COVID-19 infection localization and severity grading from chest X-ray images
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Tahir A.M., Chowdhury M.E.H., Khandakar A., Rahman T., Qiblawey Y., Khurshid U., Kiranyaz, Mustafa Serkan, Ibtehaz N., Rahman M.S., Al-Maadeed S., Mahmud S., Ezeddin M., Hameed K., and Hamid T.
- Subjects
Iterative methods ,Coronaviruses ,diagnostic imaging ,Performance ,Convolutional neural network ,Article ,lung ,Infection segmentation ,Lung segmentation ,coronavirus disease 2019 ,Diagnosis ,Humans ,controlled study ,human ,image segmentation ,thorax radiography ,thorax ,predictive value ,SARS-CoV-2 ,X-Rays ,Chest X-ray ,COVID-19 ,Deep learning ,Localisation ,Biological organs ,Chest X-ray image ,X ray ,Coronavirus ,Grading ,sensitivity and specificity ,Convolutional neural networks ,disease severity - Abstract
The immense spread of coronavirus disease 2019 (COVID-19) has left healthcare systems incapable to diagnose and test patients at the required rate. Given the effects of COVID-19 on pulmonary tissues, chest radiographic imaging has become a necessity for screening and monitoring the disease. Numerous studies have proposed Deep Learning approaches for the automatic diagnosis of COVID-19. Although these methods achieved outstanding performance in detection, they have used limited chest X-ray (CXR) repositories for evaluation, usually with a few hundred COVID-19 CXR images only. Thus, such data scarcity prevents reliable evaluation of Deep Learning models with the potential of overfitting. In addition, most studies showed no or limited capability in infection localization and severity grading of COVID-19 pneumonia. In this study, we address this urgent need by proposing a systematic and unified approach for lung segmentation and COVID-19 localization with infection quantification from CXR images. To accomplish this, we have constructed the largest benchmark dataset with 33,920 CXR images, including 11,956 COVID-19 samples, where the annotation of ground-truth lung segmentation masks is performed on CXRs by an elegant human-machine collaborative approach. An extensive set of experiments was performed using the state-of-the-art segmentation networks, U-Net, U-Net++, and Feature Pyramid Networks (FPN). The developed network, after an iterative process, reached a superior performance for lung region segmentation with Intersection over Union (IoU) of 96.11% and Dice Similarity Coefficient (DSC) of 97.99%. Furthermore, COVID-19 infections of various shapes and types were reliably localized with 83.05% IoU and 88.21% DSC. Finally, the proposed approach has achieved an outstanding COVID-19 detection performance with both sensitivity and specificity values above 99%. Scopus
- Published
- 2021
9. An intelligent and low-cost eye-tracking system for motorized wheelchair control
- Author
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Dahmani M., Chowdhury M.E.H., Khandakar A., Rahman T., Al-Jayyousi K., Hefny A., and Kiranyaz, Mustafa Serkan
- Subjects
Classification accuracy ,Eye tracking ,disabled person ,algorithm ,Electric wheelchair ,Wheelchair control ,Template matching ,Motor disability ,Motorized wheelchairs ,Costs ,Developing countries ,Benchmark database ,Eye movements ,Wheelchairs ,wheelchair ,Humans ,Convolutional neural networks ,Disabled Persons ,Illumination conditions ,human ,Neural Networks, Computer ,Eye-Tracking Technology ,Algorithms ,Low cost eye tracking - Abstract
In the 34 developed and 156 developing countries, there are ~132 million disabled people who need a wheelchair, constituting 1.86% of the world population. Moreover, there are millions of people suffering from diseases related to motor disabilities, which cause inability to produce controlled movement in any of the limbs or even head. This paper proposes a system to aid people with motor disabilities by restoring their ability to move effectively and effortlessly without having to rely on others utilizing an eye-controlled electric wheelchair. The system input is images of the user?s eye that are processed to estimate the gaze direction and the wheelchair was moved accordingly. To accomplish such a feat, four user-specific methods were developed, implemented, and tested; all of which were based on a benchmark database created by the authors. The first three techniques were automatic, employ correlation, and were variants of template matching, whereas the last one uses convolutional neural networks (CNNs). Different metrics to quantitatively evaluate the performance of each algorithm in terms of accuracy and latency were computed and overall comparison is presented. CNN exhibited the best performance (i.e., 99.3% classification accuracy), and thus it was the model of choice for the gaze estimator, which commands the wheelchair motion. The system was evaluated carefully on eight subjects achieving 99% accuracy in changing illumination conditions outdoor and indoor. This required modifying a motorized wheelchair to adapt it to the predictions output by the gaze estimation algorithm. The wheelchair control can bypass any decision made by the gaze estimator and immediately halt its motion with the help of an array of proximity sensors, if the measured distance goes below a well-defined safety margin. This work not only empowers any immobile wheelchair user, but also provides low-cost tools for the organization assisting wheelchair users. Scopus
- Published
- 2020
- Full Text
- View/download PDF
10. Depot fluphenazine and flupenthixol in the treatment of stabilized schizophrenics. A double-blind comparative trial
- Author
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Chowdhury, M.E.H., primary and Chacon, Carlos, additional
- Published
- 1980
- Full Text
- View/download PDF
11. Deep Learning Assisted Automated Assessment of Thalassaemia from Haemoglobin Electrophoresis Images
- Author
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Muhammad Salman Khan, Azmat Ullah, Kaleem Nawaz Khan, Huma Riaz, Yasar Mehmood Yousafzai, Tawsifur Rahman, Muhammad E. H. Chowdhury, Saad Bin Abul Kashem, Ullah, Azmat, Salman, Khan M., Khan, K.N., Riaz, H., Yousafzai, Y.M., Rahman, T., Chowdhury, M.E.H., Abul Kashem, S.B., Graduate School of Sciences and Engineering, and Department of Biomedical Sciences and Engineering
- Subjects
automated lane extraction ,Clinical Biochemistry ,General and internal medicine ,convolutional neural network ,object detection ,haemoglobin electrophoresis ,Automated lane extraction ,Convolutional neural network ,Haemoglobin electrophoresis ,Object detection - Abstract
Haemoglobin (Hb) electrophoresis is a method of blood testing used to detect thalassaemia. However, the interpretation of the result of the electrophoresis test itself is a complex task. Expert haematologists, specifically in developing countries, are relatively few in number and are usually overburdened. To assist them with their workload, in this paper we present a novel method for the automated assessment of thalassaemia using Hb electrophoresis images. Moreover, in this study we compile a large Hb electrophoresis image dataset, consisting of 103 strips containing 524 electrophoresis images with a clear consensus on the quality of electrophoresis obtained from 824 subjects. The proposed methodology is split into two parts: (1) single-patient electrophoresis image segmentation by means of the lane extraction technique, and (2) binary classification (normal or abnormal) of the electrophoresis images using state-of-the-art deep convolutional neural networks (CNNs) and using the concept of transfer learning. Image processing techniques including filtering and morphological operations are applied for object detection and lane extraction to automatically separate the lanes and classify them using CNN models. Seven different CNN models (ResNet18, ResNet50, ResNet101, InceptionV3, DenseNet201, SqueezeNet and MobileNetV2) were investigated in this study. InceptionV3 outperformed the other CNNs in detecting thalassaemia using Hb electrophoresis images. The accuracy, precision, recall, f1-score, and specificity in the detection of thalassaemia obtained with the InceptionV3 model were 95.8%, 95.84%, 95.8%, 95.8% and 95.8%, respectively. MobileNetV2 demonstrated an accuracy, precision, recall, f1-score, and specificity of 95.72%, 95.73%, 95.72%, 95.7% and 95.72% respectively. Its performance was comparable with the best performing model, InceptionV3. Since it is a very shallow network, MobileNetV2 also provides the least latency in processing a single-patient image and it can be suitably used for mobile applications. The proposed approach, which has shown very high classification accuracy, will assist in the rapid and robust detection of thalassaemia using Hb electrophoresis images., A part of the research was funded by the Higher Education Commission of Pakistan through its funded project of Artificial Intelligence in Healthcare, Intelligent Information Processing Lab, National Center of Artificial Intelligence.
- Published
- 2022
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