12 results on '"Chondropsis"'
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2. Cloning and sequence characterization of a non-reducing polyketide synthase gene from the lichen Xanthoparmelia semiviridis
- Author
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Chooi, Yit-Heng, Stalker, David M., Davis, Meryl A., Fujii, Isao, Elix, John A., Louwhoff, Simone H.J.J., and Lawrie, Ann C.
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POLYKETIDES , *LICHENS , *XANTHOPARMELIA , *CLONING , *ASPERGILLUS , *PHENOLS - Abstract
Abstract: Lichens produce a diverse array of secondary metabolites that have shown various biological activities. Of particular interest are the coupled phenolics that originate from polyketide pathways, such as depsides, depsidones and usnic acids, which are produced almost solely by lichens. Based on the presumed catalytic domains required for the synthesis of the key intermediates β-orsellinic acid and methylphloroacetophenone, two pairs of degenerate primers were designed to target specifically the β-ketoacylsynthase (KS) and C-methyltransferase (CMeT) domains of fungal non-reducing polyketide synthase (NR-PKS) genes with CMeT domains. These primers were used to explore the genome of the lichen Xanthoparmelia semiviridis, which produces β-orcinol depsidones and usnic acid. One of the two KS domains amplified from genomic DNA of field-collected X. semiviridis was used as a probe to recover the candidate PKS gene. A 13kb fragment containing an intact putative PKS gene (xsepks1) of 6555bp was recovered from a partial genomic library. The inferred amino acid sequence indicated that xsepks1 encodes a protein of 2164 amino acids and contains KS, acyltransferase (AT), acyl carrier protein (ACP) and CMeT domains as expected. This demonstrated a successful strategy for targeting non-reducing PKS genes with CMeT domains. Integration of the 5′ fragment of xsepks1, including the native promoter, into Aspergillus nidulans by cotransformation resulted in the transcription of the 5′xsepks1 and the splicing of a 63bp intron, suggesting that A. nidulans could be a suitable heterologous host for xsepks1 expression. [Copyright &y& Elsevier]
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- 2008
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3. A molecular phylogeny and a new classification of parmelioid lichens containing Xanthoparmelia-type lichenan (Ascomycota: Lecanorales).
- Author
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Blanco, Oscar, Crespo, Ana, Elix, John A., Hawksworth, David L., and Lumbsch, H. Thorsten
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MOLECULAR phylogeny ,MOLECULAR biology ,PHYLOGENY ,XANTHOPARMELIA ,PARMELIACEAE ,LECANORALES - Abstract
Generic concepts in the parmelioid lichens have been discussed intensively over the past three decades without reaching a broad consensus. We have now employed molecular data from three genes to provide a basis for a revised generic concept of the parmelioid lichens containing Xanthoparmelia-type lichenan. The phylogeny of the parmelioid lichens containing Xanthoparmelia-type lichenan was reconstructed using a combined Bayesian analysis of nuclear ITS, LSU rDNA and mitochondrial SSU rDNA sequences, and a maximum parsimony analysis was also made for comparison. 179 new partial sequences of 58 taxa were generated and 12 sequences were downloaded from GenBank. Our results indicate that the lichens containing Xanthoparmelia-type lichenan form a monophyletic group. However, the segregates proposed earlier do not form distinct clades within the group. Alternative hypotheses of monophyletic Karoowia and Neofuscelia that are not nested within Xanthoparmelia were rejected with our dataset; Karoowia is polyphyletic, and Neofuscelia is reduced to synonymy under Xanthoparmelia. Xanthomaculina convoluta also belongs to Xanthoparmelia. Since we were unable to sequence the umbilicate type species of Xanthomaculina, we refrain from synonymizing that genus with Xanthoparmelia here. The synonymy of Chondropsis and Paraparmelia under Xanthoparmelia already proposed is supported. The revised and enlarged genus Xanthoparmelia includes species that have cell walls with Xanthoparmelia-type lichenan, a palisade plectenchyma with a pored epicortex, lack pseudocyphellae, with usually simple rhizines, generally bifusiform conidia, and medullary chemical diversity. Ten new names are proposed, and 129 new combinations are made into Xanthoparmelia. [ABSTRACT FROM AUTHOR]
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- 2004
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4. Chondropsis lamella
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Samaai, Toufiek, Pillay, Ruwen, and Janson, Liesl
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Chondropsidae ,Chondropsis lamella ,Poecilosclerida ,Animalia ,Demospongiae ,Biodiversity ,Chondropsis ,Taxonomy ,Porifera - Abstract
Chondropsis cf. lamella (Lendenfeld, 1888) (Fig. 13 A–H), Published as part of Samaai, Toufiek, Pillay, Ruwen & Janson, Liesl, 2019, Shallow-water Demospongiae (Porifera) from Sodwana Bay, iSimangaliso Wetland Park, South Africa, pp. 1-85 in Zootaxa 4587 (1) on page 35, DOI: 10.11646/zootaxa.4587.1.1, http://zenodo.org/record/2651448, {"references":["Lendenfeld, R. Von (1888) Descriptive Catalogue of the Sponges in the Australian Museum. Taylor & Francis, Sidney and London, xiv + 260, 12 pls."]}
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- 2019
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5. Sponges associated with octocorals in the Indo-Pacific, with the description of four new species
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Giorgio Bavestrello, Daniel Wagner, Daniela Pica, Carlo Cerrano, Barbara Calcinai, and Marco Bertolino
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Phenotypic plasticity ,biology ,Ecology ,ved/biology ,ved/biology.organism_classification_rank.species ,Biodiversity ,biology.organism_classification ,Sponge ,Chondropsis ,Habitat ,Carijoa riisei ,Anthozoa ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics ,Indo-Pacific - Abstract
Sponges are characterised by high levels of phenotypic plasticity, thus allowing the same species to live in different habitats by taking different shapes. Here we describe 28 sponge species associated with the octocorals Carijoa riisei, Paratelesto rosea and Alertigorgia hoeksemai in Indonesia, Hawai’i and Vietnam, including four species that are new to science (Chondropsis subtilis, Hymedesmia (Hymedesmia) spinata, Hymedesmia (Stylopus) perlucida, Mycale (Aegogropila) furcata). Moreover, a large proportion of the described sponge species (21.4%) represent new records for the studied areas (Indonesia and Hawai’i). In total, we have studied 47 colonies of C. riisei associated with 24 sponge species, 5 colonies of P. rosea associated with 4 species and one colony of A. hoeksemai associated with one sponge species. Collectively, these examples of associations highlight the importance of epibiosis as a biodiversity enhancing process.
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- 2013
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6. Chondropsins A and B: Novel Tumor Cell Growth-Inhibitory Macrolide Lactams from the Marine Sponge Chondropsis sp
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Charles L. Cantrell, and Lewis K. Pannell, Kirk R. Gustafson, Michael R. Boyd, and Margaret R. Cecere
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Aqueous extract ,biology ,Chemistry ,Tumor cells ,Growth inhibitory ,General Chemistry ,Fractionation ,biology.organism_classification ,Biochemistry ,Catalysis ,Sponge ,Colloid and Surface Chemistry ,Chondropsis - Abstract
Antiproliferative bioassay-guided fractionation of an aqueous extract of the marine sponge Chondropsis sp. provided two novel macrolides, chondropsins A (1) and B (2). The structures were elucidate...
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- 2000
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7. Chondropsis subtilis Calcinai, Bavestrello, Bertolino, Pica, Wagner & Cerrano, 2013, n. sp
- Author
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Calcinai, Barbara, Bavestrello, Giorgio, Bertolino, Marco, Pica, Daniela, Wagner, Daniel, and Cerrano, Carlo
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Chondropsidae ,Chondropsis subtilis ,Poecilosclerida ,Animalia ,Demospongiae ,Biodiversity ,Chondropsis ,Taxonomy ,Porifera - Abstract
Chondropsis subtilis n. sp. (Fig. 6 A���H) (Tab. 3) Holotype material. MSNG 56260: sample Bugor 504: Indonesia, North Sulawesi, Manado Tua Island, Negeri, 15 m, September 2007. Paratype material. MSNG 56261: sample Siladen Village: Indonesia, North Sulawesi, Siladen Island, 10 m, October 2008. Comparative material: Chondropsis wilsoni Dendy, 1895 holotype material BMNH, 1902.10.18.155- 156-157 (three slides). Diagnosis. Chondropsis subtilis is characterised by a surface that is covered by a reticulated pattern of fine sand, a main skeleton of longitudinal, ascending tracts of sand, strongyles and foreign spicules embedded in spongin; spicules are thin strongyles (2 ��m) as megascleres and small sigmas as microscleres. Description. The sponge (holotype) encrusts a colony of Carijoa riisei as a pellicle up to 0.5 mm thick (Fig. 6 A, B), leaving only the polyp openings free. The holotype occurs on several branches of the coral, up to 14 cm long (Fig. 6 C). The paratype occurs on several inter-crossing branches of C. riisei covered by numerous other epibionts (bryozoans, vermetids, foraminifera). Consistency soft and compressible. Surface microconulose due to protruding choanosomal bundles; in some portions of the sponge surface sand and spicules create a fine network (Fig. 6 D). In the paratype the surface is collapsed, the conules are more prominent and the sponge surface is strongly shaggy. The colour is pink salmon in situ (Fig. 6 A, B), whitish in ethanol (Fig. 6 C). Skeleton. Ectosomal skeleton of scattered, tangential strongyles, sand and abundant foreign spicules. A regular network of polygonal to circular meshes, about 100 ��m in diameter, is evident on the sponge surface (Fig. 6 D); in some parts of the sponge, the surface consists of an homogeneous layer of sand, foreign spicules and strongyles (Fig. 6 E) and the regular pattern of sand is not evident. Choanosomal skeleton of longitudinal, ascending tracts of spongin (70���125 ��m in diameter), embedded sand grains, strongyles and foreign spicules connected by debris and transverse strongyles; they sometimes branch dichotomously reaching the ectosome (Fig. 6 F). Strongyles from the longitudinal tracts extend beyond the surface thus making it microhispid (Fig. 6 F). Spicules. Abundant strongyles, straight and very thin, (Fig. 6 G), with a central black canal, 142.5 ��� 180 x 2 ��m. Sigmas (Fig. 6 H) ���C��� shaped very thin, abundant and ���S��� shaped rare, 13.5 ��� 18.5 ��m. Refer to Tab. 3 for complete measurements. Remarks. The in situ photograph of the holotype shows a massive sponge with scattered oscules close to the colony of Carijoa riisei (Fig. 6 B) and spreading over the octocoral. The massive sponge has the same colour as the epibiontic one described above. They also share similar surface features. We collected only the epibiontic portion but it is very likely that the species is also able to grow in a massive form. All species of Chondropsis have been described from the Indo-Pacific (van Soest et al. 2011). Among these, the species with spicular complement similar to C. subtilis n. sp. (strongyles and sigmas as the unique type of microscleres) are C. ceratosus Kirkpatrick, 1900, C. chaliniformis Lendenfeld, 1889, C. columnifera Dendy, 1895, C. confoederata (Lamarck, 1814), C. kirkii (Bowerbank, 1841), C. lamella (Vacelet, Vasseur & Lev��, 1976) and C. wilsoni Dendy, 1895. Chondropsis australis (Dendy, 1896) differs in having isochelae in addition to sigmas. The remaining species lack microscleres. Chondropsis ceratosus, C. chaliniformis and C. columnifera differ from the new species mainly in having larger sigmas (30���50 ��m, 30 ��m and 35 ��m respectively). Chondropsis kirkii has very small sigmas (5 ��m). Chondropsis lamella differs in having two size categories of sigmas (25���30 ��m and 12 ��m). The examination of the holotype of C. wilsoni reveals that it differs from the new species in having: i) strongyles or tylotes, with irregular extremities, as megascleres (180 x 2.5 ��m), ii) the distribution on the surface of small, scattered exogenous material, without a sandy dermal reticulation, and iii) tracts of strongyles in the choanosome being perpendicular to the surface without tangential, connecting strongyles; these tracts of spicules end in tufts. Chondropsis confoederata differs in having flexuous or bent strongyles (140 ��� 160 x 1 ��� 3 ��m) and a choanosomal skeleton of spongin fibres without clear orientation. Etymology. Named after the latin ��� subtilis ���, meaning thin; referring to its very thin strongyles., Published as part of Calcinai, Barbara, Bavestrello, Giorgio, Bertolino, Marco, Pica, Daniela, Wagner, Daniel & Cerrano, Carlo, 2013, Sponges associated with octocorals in the Indo-Pacific, with the description of four new species, pp. 1-61 in Zootaxa 3617 (1) on pages 12-14, DOI: 10.11646/zootaxa.3617.1.1, http://zenodo.org/record/248150, {"references":["Dendy, A. (1895) Catalogue of Non-Calcareous Sponges collected by J. Bracebridge Wilson, Esq., M. A., in the neighbourhood of Port Phillip Heads. Part II. Proceedings of the Royal Society of Victoria (New Series), 7, 232 - 260.","Soest, R. W. M van, Boury-Esnault, N., Hooper, J. N. A., Rutzler, K., Voogd, N. J. de, Alvarez, B., Hajdu, E., Pisera, A. B., Vacelet, J., Manconi, R., Schoenberg, C., Janussen, D., Tabachnick, K. R. & Klautau, M. (2011) World Porifera database. Available online from http: // www. marinespecies. org / porifera (accessed 2011).","Kirkpatrick, R. (1900). Description of Sponges from Funafuti. Annals and Magazine of Natural History, (7) 6 (34), 345 - 362.","Lendenfeld, R. Von (1889) A Monograph of the Horny Sponges. Trubner and Co., London, 936 pp.","Lamarck, J. B. P. de Monet, Comte de (1814) Sur les polypiers empates. Annales Museum National D'Histoire Naturelle, Paris, 20, 370 - 386, 432 - 458.","Bowerbank, J. S. (1841) Descriptions of three species of sponge, containing some new forms of organization. Microscopical Journal London, 1, 161 - 162.","Vacelet, J., Vasseur, P. & Levi, C. (1976) Spongiaires de la pente externe des recifs coralliens de Tulear (Sud-Ouest de Madagascar). Memoires du Museum national d'Histoire naturelle (A, Zoologie), 49,1 - 116.","Dendy, A. (1896) Catalogue of Non-Calcareous Sponges collected by J. Bracebridge Wilson, Esq., M. A., in the neighbourhood of Port Phillip Heads. Part II. Proceedings of the Royal Society of Victoria (New Series), 8, 14 - 51."]}
- Published
- 2013
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8. Synthesis of a New Cerebroside from a Chondropsis sp. Sponge
- Author
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Tetsuya Komori, Yoshitaka Ueda, Masanori Honda, and S. Sugiyama
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chemistry.chemical_classification ,biology ,Stereochemistry ,Hypotensive drug ,Glycoside ,General Chemistry ,General Medicine ,biology.organism_classification ,Cerebroside ,Sponge ,Chondropsis ,chemistry ,Biochemistry ,Drug Discovery ,Galactosyl ceramide - Published
- 1991
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9. ChemInform Abstract: Chondropsins A and B: Novel Tumor Cell Growth-Inhibitory Macrolide Lactams from the Marine Sponge Chondropsis sp
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Margaret R. Cecere, Kirk R. Gustafson, Charles L. Cantrell, Lewis K. Pannell, and Michael R. Boyd
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Sponge ,Chondropsis ,biology ,Chemistry ,Growth inhibitory ,Tumor cells ,General Medicine ,biology.organism_classification ,Microbiology - Published
- 2001
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10. (1558) Proposal to conserve the name Xanthoparmelia against Chondropsis nom. cons. (Parmeliaceae )
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Ana Crespo and David L. Hawksworth
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Chondropsis ,biology ,cons ,Parmeliaceae ,Botany ,Plant Science ,Xanthoparmelia ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Published
- 2002
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11. XanthoparmeliaandChondropsis(Lichenes) in New Zealand
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David J. Galloway
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biology ,Ecology ,Notata ,Lichenology ,Zoology ,Plant Science ,biology.organism_classification ,Chondropsis ,Taxon ,Habitat ,Typification ,Taxonomy (biology) ,Xanthoparmelia ,Ecology, Evolution, Behavior and Systematics - Abstract
Sixteen species of Xanthoparmelia are recognised in the New Zealand flora. X. australasica D. Galloway is described and the new combinations X. flavescentireagens (Gyelnik) D. Galloway and X. mougeotina (Nyl.) D. Galloway are proposed. Typification, synonymy, morphology, chemistry, distribution, and habitat information of each taxon are given and a key to species includes the superficially similar Chondropsis semiviridis. X. amphixantha, X.flavescentireagens, X. hypoclystoides, X. mexicana, X. notata, X. thamnoides, X. tinctina, X. subnuda, and X. substrigosa are new to the New Zealand flora.
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- 1980
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12. A new species of Chondropsis (Lichenised Ascomycotina) from Australia and New Zealand
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P Child and John A. Elix
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Systematics ,Chondropsis ,Ecology ,Systematic Botany ,Ocean Engineering ,Taxonomy (biology) ,Biology ,Plant taxonomy ,Lichen - Abstract
A new lichen species, Chondropsis sorediata, is described from Australia and New Zealand.
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- 1986
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