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Studies of the peopling of the Americas have focused on the timing and number of initial migrations. Less attention has been paid to the subsequent spread of people within the Americas. We sequenced 15 ancient human genomes spanning from Alaska to Patagonia; six are ≥10,000 years old (up to ~18× coverage). All are most closely related to Native Americans, including those from an Ancient Beringian individual and two morphologically distinct "Paleoamericans." We found evidence of rapid dispersal and early diversification that included previously unknown groups as people moved south. This resulted in multiple independent, geographically uneven migrations, including one that provides clues of a Late Pleistocene Australasian genetic signal, as well as a later Mesoamerican-related expansion. These led to complex and dynamic population histories from North to South America.

The two living species of bison (European and American) are among the few terrestrial megafauna to have survived the late Pleistocene extinctions. Despite the extensive bovid fossil record in Eurasia, the evolutionary history of the European bison (or wisent, Bison bonasus) before the Holocene (

The Bronze Age of Eurasia (around 3000-1000 BC) was a period of major cultural changes. However, there is debate about whether these changes resulted from the circulation of ideas or from human migrations, potentially also facilitating the spread of languages and certain phenotypic traits. We investigated this by using new, improved methods to sequence low-coverage genomes from 101 ancient humans from across Eurasia. We show that the Bronze Age was a highly dynamic period involving large-scale population migrations and replacements, responsible for shaping major parts of present-day demographic structure in both Europe and Asia. Our findings are consistent with the hypothesized spread of Indo-European languages during the Early Bronze Age. We also demonstrate that light skin pigmentation in Europeans was already present at high frequency in the Bronze Age, but not lactose tolerance, indicating a more recent onset of positive selection on lactose tolerance than previously thought.

Prehistoric shell mounds can be useful for the quantification of the radiocarbon marine reservoir effect (MRE) and, at the same time, knowledge about the MRE allows for the establishment of robust chronologies for these sites. This creates a loop in which the archaeological setting has a dual role: it is part of both the method and the application. Therefore, it is paramount to address these sites from both archaeological and environmental perspectives, investigating their origin and diagenesis in order to overcome biases caused by post-depositional alterations. In this study, samples of bone, charcoal and shell from a Late Holocene shell mound in Southern Brazil, the Sambaqui de Cabeçuda, were analyzed following a multidisciplinary approach to disentangle the complex relationships between archaeology and the environment. We performed X-ray diffraction, radiocarbon dating, stable isotopes (δ13C, δ18O, δ15N) and anthracology analyses as well as Bayesian Chronological Models and Isotope Mixing Models to assess the local MRE and to reconstruct the diet of Cabeçuda builders. Our results reveal a negative local correction for the MRE (ΔR = –263 ± 46 14C yr), expected for the lagoon next to the site, and diets with considerable intakes of marine proteins. We examine the implications of these results for the chronology of the site and discuss a series of complications when performing MRE studies using shell mound sites. [ABSTRACT FROM AUTHOR]

Hydrogen isotope ratios of biomarkers have been shown to reflect water isotope ratios, and in some cases correlate significantly with salinity. The δ²H-salinity relationship is best studied for long-chain alkenones, biomarkers for haptophyte algae, and is known to be influenced by a number of different environmental parameters. It is not fully known why δ²H ratios of lipids retain a correlation to salinity, and whether this is a general feature for other lipids produced by haptophyte algae. Here, we analyzed δ²H ratios of three fatty acids, brassicasterol, long-chain C37 alkenones and phytol from three different haptophyte species grown over a range of salinities. Lipids synthesized in the cytosol, or relying on precursors of cytosolic origin, show a correlation between their δ²H ratios and salinity. In contrast, biosynthesis in the chloroplast, or utilizing precursors created in the chloroplast, yields lipids that do not show a correlation between δ²H ratios and salinity. This leads to the conclusion that location of metabolism is the first-order control on the salinity signal retained in δ²H ratios of certain lipids. Additionally, we found that δ²H ratios of alkenones from batch cultures of the Group II haptophyte species Tisochrysis lutea correlate positively with temperature, contrary to findings from cultures of Group III haptophytes, but retain a similar response to nutrient availability in line with other Group III haptophytes. [ABSTRACT FROM AUTHOR]

To examine the implications of seasonality for the construction of a single-year calibration curve we obtained separate dates on earlywood and latewood fractions of tree rings originating from England and dendrochronologically dated between AD 1352 and AD 1442. These demonstrated that an average difference of 26±15 yr exists between earlywood and latewood and that this difference can be as high as 33±19 yr during periods of high radiocarbon (14C) production. It is argued that this difference is due to both changes in atmospheric 14C and the incorporation of stored carbohydrates into earlywood. Based on this, it was possible to separate an atmospheric and physiological contribution to this difference. Our modeling indicates that storage can produce a difference of up to 10 years between earlywood and latewood. This suggests that full-year tree rings from deciduous trees may be less appropriate for the construction of a single-year calibration curve and that specific atmospheric events can be more easily detected by measuring only latewood. [ABSTRACT FROM AUTHOR]

The core metabolism of microorganisms has a major influence on the hydrogen isotopic composition of their fatty acids. Heterotrophic microorganisms produce fatty acids with a deuterium to hydrogen (D/H) ratio either slightly depleted or enriched in D compared to the growth water, while photo- and chemoautotrophic microorganisms produce fatty acids which are heavily depleted in D. However, besides metabolism other biochemical and environmental factors (i.e. biosynthetic pathways, growth phase and temperature) have been shown to affect the D/H ratio of fatty acids, and it is necessary to evaluate the magnitude of these effects compared to that of metabolism. Here, we show that the effect of salinity on the D/H ratio of fatty acids depends on the core metabolism of the microorganism. While fatty acids of the photoautotroph Isochrysis galbana become more enriched in D with increasing salinity (enrichment of 30-40‰ over a range of 25 salinity units), no effect of salinity on the D/H ratio of fatty acids of the heterotrophic Pseudomonas str. LFY10 was observed ((ε)lipid/water of the C16:0 fatty acid of ~120‰ over a range of 10 salinity units). This can likely be explained by the relative contributions of different H and nicotinamide adenine dinucleotide phosphate sources during fatty acid biosynthesis., (© FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)