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Land management practices that overlook soil limitations and potential have led to varying degrees of degradation. This study evaluates the carbon content in chemical and oxidisable soil fractions across different pasture recovery periods, comparing them to secondary forests. The management practices assessed include the following: secondary forest (SF), perennial pasture (PP), perennial pasture recovered five years ago (P5), and perennial pasture recovered eight years ago (P8), all on Plinthosols. We analysed carbon levels in oxidisable fractions and humic substances at depths of 0–0.10 m, 0.10–0.20 m, 0.20–0.30 m, and 0.30–0.40 m. The SF and P8 areas showed the highest organic matter content within the humic fractions, compared to the PP and P5 areas. Additionally, the P8 area demonstrated an increase in the labile and moderately recalcitrant fractions of organic matter, standing out among the different fractions evaluated. The multivariate principal component analysis indicated that P8 has the greatest impact on soil quality, followed by FS, P5, and PP. The pasture recovery over the past eight years has significantly improved soil carbon accumulation, highlighting the benefits of land restoration. [ABSTRACT FROM AUTHOR]

The growing concern of aquatic heavy metal (HM) pollution is dependent on the toxic nature of its bio-available form. Thus, bio-availability is guided by the HM fractionation in water. This study was therefore conducted to evaluate the spatial impact on physicochemical fractionation of HM (Zn, Mn, Cu, and Fe) in the waters of the Hirakud reservoir in India. Speciation along different pores using a filtration technique was adopted to fractionate the HMs in water samples. The result suggests that the water of the study area is polluted with Cu (0.22–0.35 mg/L), Mn (0.15–0.23 mg/L), and Fe (1.90–3.10 mg/L) that have crossed their permissible limits while Zn (0.17–0.97 mg/L) was within the permissible standard. When studied for physical partitioning, the right dyke was comparatively more polluted than the left dyke. While the water samples were dominated by the dissolved fraction of heavy metals, it was construed that a large proportion of the HMs are in bio-available form. Further, a distinct impact of spatial variation on metal fractionation was also evident in the study with PCA revealing site-specific behaviour. Therefore, it can be concluded that multiple anthropogenic activities lead to the distribution and fractionation of HMs in water. [ABSTRACT FROM AUTHOR]

Host-pathogen interactions are pivotal in regulating establishment, progression, and outcome of an infection. While affinity-purification mass spectrometry has become instrumental in characterizing such interactions, it suffers from limitations in scalability and biological authenticity. Here we present the use of co-fractionation mass spectrometry for high throughput analysis of host-pathogen interactions from native viral infections of two jumbophages (ϕKZ and ϕPA3) in Pseudomonas aeruginosa. This approach enabled the detection of > 6000 unique host-pathogen interactions for each phage, encompassing > 50% of their respective proteomes. This deep coverage provided evidence for interactions between KZ-like phage proteins and the host ribosome, and revealed protein complexes for previously undescribed phage ORFs, including a ϕPA3 complex showing strong structural and sequence similarity to ϕKZ non-virion RNA polymerase. Interactome-wide comparison across phages showed similar perturbed protein interactions suggesting fundamentally conserved mechanisms of phage predation within the KZ-like phage family. To enable accessibility to this data, we developed PhageMAP, an online resource for network query, visualization, and interaction prediction ( https://phagemap.ucsf.edu/ ). We anticipate this study will lay the foundation for the application of co-fractionation mass spectrometry for the scalable profiling of host-pathogen interactomes and protein complex dynamics upon infection.

Synucleinopathies are a group of central nervous system pathologies that are characterized by the intracellular accumulation of misfolded and aggregated α-synuclein in proteinaceous depositions known as Lewy Bodies (LBs). The transition of α-synuclein from its physiological to pathological form has been associated with several post-translational modifications such as phosphorylation and an increasing degree of insolubility, which also correlate with disease progression in post-mortem specimens from human patients. Neuronal expression of α-synuclein in model organisms, including Drosophila melanogaster, has been a typical approach employed to study its physiological effects. Biochemical analysis of α-synuclein solubility via high-speed ultracentrifugation with buffers of increasing detergent strength offers a potent method for identification of α-synuclein biochemical properties and the associated pathology stage. Unfortunately, the development of a robust and reproducible method for the evaluation of human α-synuclein solubility isolated from Drosophila tissues has remained elusive. Here, we tested different detergents for their ability to solubilize human α-synuclein carrying the pathological mutation A53T from the brains of aged flies. We also assessed the effect of sonication on the solubility of human α-synuclein and optimized a protocol to discriminate the relative amounts of soluble/insoluble human α-synuclein from dopaminergic neurons of the Drosophila brain. Our data established that, using a 5% SDS buffer, the three-step protocol separates cytosolic soluble, detergent-soluble and insoluble proteins in three sequential fractions according to their chemical properties. This protocol shows that sonication breaks down α-synuclein insoluble complexes from the fly brain, making them soluble in the SDS buffer and thus enriching the detergent-soluble fraction of the protocol. [ABSTRACT FROM AUTHOR]

Crude oil spilled at sea is chemically altered through environmental processes such as dissolution, biodegradation, and photodegradation. Transformation of hydrocarbons to oxygenated species increases water-solubility. Metabolites and oxidation products largely remain uncharacterized by common analytical methods but may be more bioavailable to aquatic organisms. Studies have shown that unresolved (i.e. unidentified) polar compounds ('UPCs') may constitute > 90% of the water-accommodated fraction (WAF) of heavily weathered crude oils, but still there is a paucity of information characterizing their toxicological significance in relation to other oil-derived toxicants. In this study, low-energy WAFs (no droplets) were generated from two field-weathered oils (collected during the 2010 Deepwater Horizon incident) and their polar fractions were isolated through fractionation. To allow establishment of thresholds for acute toxicity (LC50) of the dissolved and polar fraction of field collected oils, we concentrated both WAFs and polar fractions to beyond field-documented concentrations, and the acute toxicity of both to the marine copepod Acartia tonsa was measured and compared to the toxicity of the native WAF (non-concentrated). The difference in toxic units (TUs) between the total of the mixture and of identified compounds of known toxicity (polycyclic aromatic hydrocarbons [PAHs] and alkyl phenols) in both WAF and polar fractions was used to estimate the contribution of the UPC to overall toxicity. This approach identified that UPC had a similar contribution to toxicity as identified compounds within the WAFs of the field-weathered oils. This signifies the relative importance of polar compounds when assessing environmental impacts of spilled and weathered oil. [ABSTRACT FROM AUTHOR]

Located in the southwest of Jiangxi Province, Dayu County has the most abundant tungsten resources in China. In this paper, 2969 agricultural soil samples were collected downstream of the tungsten mining area in Dayu, and all samples were tested for the contents of potentially toxic elements (PTEs) such as Cd, Pb, Zn, Cr, Cu, Ni, Hg, as well as the mining-related elements W, Sn, Mo and pH. In addition, 135 soil samples were measured for chemical morphology of Cd. The results show that the distribution patterns of Cd, Pb, Zn, Cu and W, Sn, Mo are relatively consistent, which are considered to be affected by upstream mining activities. Hg is possibly overlaying the effects of human production and living activities. Cr and Ni are considered as a natural source. From the perspective of total concentration, the ecological risk of PTEs in the study area was low, with over 80% of the samples being evaluated as safe. However, based on chemical fraction of Cd, more than 75% of the samples were assessed as moderately or severely contaminated. The serious acidification of soil in the study area is the main reason for the increase activity of Cd and its ecological risk. [ABSTRACT FROM AUTHOR]

The Macusani Volcanics and related rocks (SE Peru) are well known examples of erupted strongly peraluminous rare-metal rich silicic magmas. We used the phenocryst/matrix glass method to determine relevant mineral/melt partition coefficients to facilitate modeling of such systems. Concentrations of trace (Li, Be, B, Al, P, Ti, Mn, Zn, Ge, Rb, Sr, Zr, Nb, Sn, Cs, Ba, La, Sm, Eu, Gd, Yb, Ta, W, Pb and U) and major elements were measured in obsidians, matrix glasses, glass inclusions, phenocrysts and phases from biotite reaction zones by Laser-Ablation ICP-MS and Electron Microprobe Analysis. The derived phenocryst/melt partition coefficients for quartz, plagioclase, sanidine, biotite, muscovite, andalusite and ilmenite are compared with values from reference silicic magmas and literature. Mineral/biotite partition coefficients are calculated for tourmaline and hercynite. The database is then applied to model chemical fractionation in Macusani magmas. Fractional crystallization and partial melting trends (with the B concentration used as a proxy for the fraction of residual liquid) generate progressively more evolved (higher Rb, Nb, Sn, Cs and Ta and lower Sr, Ba and Pb) residual liquids. The trace element concentrations in obsidians are reproduced for 50–70% crystallization of matrix glasses from ash-flow tuffs. This demonstrates that differentiation of magmas parental to the ash-flow tuffs can generate the highly evolved obsidian-forming liquids. Based on this, we present an updated model for crustal melting and the generation of the Macusani magmas. A metapelitic component dominates the source region but calcic plagioclase cores enriched in Sr, Ba and La suggest an affiliation with mafic magmas, which were likely potassic to ultrapotassic. The presence of a mafic component is consistent with the high heat fluxes in the source region and accounts for specific magmatic variables (i.e., middle crustal anatectic zone, very reducing fO 2 , high F). Petrogenetic processes differ significantly between Macusani Volcanics suites and two-mica leucogranites despite both having nearly identical source rocks, mineral assemblages and compositions. [ABSTRACT FROM AUTHOR]

Several important processes in the petrogenesis of granite are still debated due to a poor understanding of complex interactions between minerals during the melting and melt segregation processes. To promote an improved understanding of the mineral-melt relationships, we present a systematic petrographic and geochemical analysis for melanosome and leucosome samples from the Triassic Jindong migmatite, South China. Petrographic observations and zircon U-Pb geochronology indicate that the Jindong migmatite was formed through water-fluxed melting of the Early Paleozoic gneissic granite (437 ± 2 Ma) during the Triassic (238 ± 1 Ma), with the production of melt dominated by the breakdown of K-feldspar, plagioclase, and quartz. The Jindong leucosomes may be divided into lenticular and net-structured types. Muscovite, plagioclase, and K-feldspar in the net-structured leucosome show higher Rb and much lower Ba and Sr contents than those in the lenticular leucosome. This may be attributed to the elevation of Rb and decreasing Ba and Sr abundances in melts during the segregation process due to early fractional crystallization of K-feldspar and plagioclase. These leucosomes show negative correlation between εNd(t) and P2O5, reflecting increasing dissolution of low-εNd(t) apatite during the melting process. The continuous dissolution of apatite caused saturation of monazite and xenotime in melt, resulting in the growth of monazite and xenotime around apatite in the melanosome. This process led to a sharp decrease of Th, Y, and REE with increasing P2O5 in the leucosome samples. This complex interplay of accessory mineral reactions in the source impacts REE geochemistry and Nd isotope ratios of granites. As the granites worldwide exhibit similar compositional and isotopic patterns to the Jindong leucosomes, we suggest that both the melting and melt segregation processes strongly control the granitic melt compositions. [ABSTRACT FROM AUTHOR]

A solid phase chemical fractionation (SPCF) of the Mn in hot infusions prepared from commercial samples of roasted (RM) and green mate (GM) using a chelating resin Chelex 100 (NH4+ form) was performed to assess the relative lability of this essential trace element (ETE). In addition, total Mn contents in the RM and GM samples and their infusions were determined by flame atomic absorption spectrometry. Total polyphenol (TP) contents and the presence of soluble melanoidins (SM) were correlated with the Mn solubility in the RM and GM infusions. From the SPCF study, it was possible to observe that the soluble Mn forms in the mate infusions were essentially associated with relatively noninert chemical species (98.4–99.7%), suggesting that they may be potentially bioavailable. In addition, the soluble Mn contents in the GM infusions were 20.5% higher than those found in the RM. Mn solubility in the (RM) infusions was highly and directly correlated (r = 0.99) with the soluble TP, while in the GM infusions, it was high and inversely correlated with soluble TP (r = −0.87). On the other hand, Mn solubility in the RM and GM infusions was weakly correlated with the SM. It should be stressed that GM infusions can contribute with 57 and 44% more than the RM infusions to the recommended adequate intake of Mn established for females and males, respectively. Moreover, this work is the first to evaluate and compare the relative lability of Mn and its solubility in the RM and GM infusions. [ABSTRACT FROM AUTHOR]

Cross-linking mass spectrometry (XL-MS) is an emergent technology for studying protein-protein interactions (PPIs) and elucidating architectures of protein complexes. The development of various MS-cleavable cross-linkers has facilitated the identification of cross-linked peptides, enabling XL-MS studies at the systems level. However, the scope and depth of cellular networks revealed by current XL-MS technologies remain limited. Due to the inherently broad dynamic range and complexity of proteomes, interference from highly abundant proteins impedes the identification of low-abundance cross-linked peptides in complex samples. Thus, peptide enrichment prior to MS analysis is necessary to enhance cross-link identification for proteome-wide studies. Although chromatographic techniques including size exclusion (SEC) and strong cation exchange (SCX) have been successful in isolating cross-linked peptides, new fractionation methods are still needed to further improve the depth of PPI mapping. Here, we present a two-dimensional (2D) separation strategy by integrating peptide SEC with tip-based high pH reverse-phase (HpHt) fractionation to expand the coverage of proteome-wide XL-MS analyses. Combined with the MS-cleavable cross-linker DSSO, we have successfully mapped in vitro PPIs from HEK293 cell lysates with improved identification of cross-linked peptides compared to existing approaches. The method developed here is effective and can be generalized for cross-linking studies of complex samples.

Land management practices that overlook soil limitations and potential have led to varying degrees of degradation. This study evaluates the carbon content in chemical and oxidisable soil fractions across different pasture recovery periods, comparing them to secondary forests. The management practices assessed include the following: secondary forest (SF), perennial pasture (PP), perennial pasture recovered five years ago (P5), and perennial pasture recovered eight years ago (P8), all on Plinthosols. We analysed carbon levels in oxidisable fractions and humic substances at depths of 0–0.10 m, 0.10–0.20 m, 0.20–0.30 m, and 0.30–0.40 m. The SF and P8 areas showed the highest organic matter content within the humic fractions, compared to the PP and P5 areas. Additionally, the P8 area demonstrated an increase in the labile and moderately recalcitrant fractions of organic matter, standing out among the different fractions evaluated. The multivariate principal component analysis indicated that P8 has the greatest impact on soil quality, followed by FS, P5, and PP. The pasture recovery over the past eight years has significantly improved soil carbon accumulation, highlighting the benefits of land restoration.

The identification of highly toxic metals like Cd, Ni, Pb, Cr, Co or Cu in ambient particulate matter (PM) has garnered a lot of interest recently. Exposure to toxic metals, including carcinogenic ones, at levels above recommended limits, can significantly affect human health. Prolonged exposure to even trace amounts of toxic or essential metals can also have negative health impacts. In order to assess significant risks, it is crucial to govern the concentrations of bioavailable/bio-accessible metals that are available in PM. Estimating the total metal concentrations in PM is only an approximation of metal toxicity. This review provides an overview of various procedures for extracting soluble toxic metals from PM and the importance of chemical fractionation in risk assessment. It is observed that the environmental risk indices such as bioavailability index (BI), contamination factor (CF) and risk assessment code (RAC) are specifically influenced by the concentration of these metals in a particular fraction. Additionally, there is compelling evidence that health risks assessed using total metal concentrations may be overestimated, therefore, the metal toxicity assessment is more accurate and more sensitive to the concentration of the bioavailable/bio-accessible fraction than the total metal concentrations. Hence, chemical fractionation of toxic metals can serve as an effective tool for developing environmental protection laws and improving air quality monitoring programs for public health. [ABSTRACT FROM AUTHOR]

Biological enzymes significantly speed up chemical reactions in living organisms. The complex environment within cells has long been appreciated as a major regulator of enzymatic activities. Recent advances in the rapidly evolving field of biological condensates, which are spontaneously formed by macromolecules through phase separation, suggest new possibilities for how enzymatic reactions may be modulated within cells. Here, we review the latest studies of enzymatic reactions in biological condensates focusing on basic concepts in enzymology and discussing some context-dependent roles of phase separation in regulating biochemical reactions.

One goal of microbial ecology researchers is to capture the maximum amount of information from all organisms in a sample. The recent COVID-19 pandemic, caused by the RNA virus SARS-CoV-2, has highlighted a gap in traditional DNA-based protocols, including the high-throughput methods the authors previously established as field standards. To enable simultaneous SARS-CoV-2 and microbial community profiling, the authors compared the relative performance of two total nucleic acid extraction protocols with the authors' previously benchmarked protocol. The authors included a diverse panel of environmental and host-associated sample types, including body sites commonly swabbed for COVID-19 testing. Here the authors present results comparing the cost, processing time, DNA and RNA yield, microbial community composition, limit of detection and well-to-well contamination between these protocols.

Deep proteome coverage in bottom-up proteomics requires peptide-level fractionation to simplify the complex peptide mixture before analysis by tandem mass spectrometry. By decreasing the number of coeluting precursor peptide ions, fractionation effectively reduces the complexity of the sample leading to higher sample coverage and reduced bias toward high-abundance precursors that are preferentially identified in data-dependent acquisition strategies. To achieve this goal, we report a bead-based off-line peptide fractionation method termed CIF or carboxylate-modified magnetic bead-based isopropanol gradient peptide fractionation. CIF is an extension of the SP3 (single-pot solid phase-enhanced sample preparation) strategy and provides an effective but complementary approach to other commonly used fractionation methods including strong cation exchange and reversed phase-based chromatography. We demonstrate that CIF is an effective offline separation strategy capable of increasing the depth of peptide analyte coverage both when used alone or as a second dimension of peptide fractionation in conjunction with high pH reversed phase. These features make it ideally suited for a wide range of proteomic applications including the affinity purification of low-abundance bait proteins.

Synucleinopathies are a group of central nervous system pathologies that are characterized by the intracellular accumulation of misfolded and aggregated α-synuclein in proteinaceous depositions known as Lewy Bodies (LBs). The transition of α-synuclein from its physiological to pathological form has been associated with several post-translational modifications such as phosphorylation and an increasing degree of insolubility, which also correlate with disease progression in post-mortem specimens from human patients. Neuronal expression of α-synuclein in model organisms, including Drosophila melanogaster, has been a typical approach employed to study its physiological effects. Biochemical analysis of α-synuclein solubility via high-speed ultracentrifugation with buffers of increasing detergent strength offers a potent method for identification of α-synuclein biochemical properties and the associated pathology stage. Unfortunately, the development of a robust and reproducible method for the evaluation of human α-synuclein solubility isolated from Drosophila tissues has remained elusive. Here, we tested different detergents for their ability to solubilize human α-synuclein carrying the pathological mutation A53T from the brains of aged flies. We also assessed the effect of sonication on the solubility of human α-synuclein and optimized a protocol to discriminate the relative amounts of soluble/insoluble human α-synuclein from dopaminergic neurons of the Drosophila brain. Our data established that, using a 5% SDS buffer, the three-step protocol separates cytosolic soluble, detergent-soluble and insoluble proteins in three sequential fractions according to their chemical properties. This protocol shows that sonication breaks down α-synuclein insoluble complexes from the fly brain, making them soluble in the SDS buffer and thus enriching the detergent-soluble fraction of the protocol.

Heavy metal pollution in soils caused by mining activities is a severe issue worldwide. It is necessary to find a suitable approach to mitigate heavy metal-contaminated soil. Yet little is known about how soil amendments affect the chemical forms of heavy metals. Biochar produced from peanut shells (PSB300) and corn cob (CCB300) at 300 °C, and apatite (AP) were applied at various ratios to investigate their ability to adsorb lead (Pb) and zinc (Zn) in contaminated soil. The Pb and Zn's chemical fractions were analyzed utilizing Tessier's sequential extraction procedure and quantified using inductively coupled plasma mass spectroscopy. The one-month amendment incubation of biochar and AP could significantly diminish Pb and Zn's exchangeable fractions, and CCB300 showed a slightly better effect on declining the exchangeable fractions of Pb and Zn than PSB300, which might be attributed to the higher values of OC and EC of CCB300 than those of PSB300. Moreover, the amendments could also transform the exchangeable fractions of Pb and Zn into stable fractions, resulting in immobility in natural conditions. Thus, PSB300 and CCB300 and the mixture of biochar/apatite could be hopeful amendments for immobilizing heavy metals in heavy metal multi-metal-contaminated field soil. [ABSTRACT FROM AUTHOR]

Soil organic matter (SOM) is biologically, chemically, and physically complex. As a major store of nutrients within the soil, it plays an important role in nutrient provision to plants. An enhanced understanding of SOM utilisation processes could underpin better fertiliser management for plant growth, with reduced environmental losses. Metaproteomics can allow the characterisation of protein profiles and could help gain insights into SOM microbial decomposition mechanisms. Here, we applied three different extraction methods to two soil types to recover SOM with different characteristics. Specifically, water‐extractable organic matter, mineral‐associated organic matter and protein‐bound organic matter were targeted with the aim to investigate the metaproteome enriched in those extractions. As a proof‐of‐concept, replicated extracts from one soil were further analysed for peptide identification using liquid chromatography followed by tandem mass spectrometry. We employed a framework for mining mass spectra for both peptide assignment and fragmentation pattern characterisation. Different extracts were found to exhibit contrasting total protein and humic substance content for the two soils investigated. Overall, water extracts displayed the lowest humic substance content (in both soils) and the highest number of peptide identifications (in the soil investigated) with the most frequent peptide hits associated with diverse substrate/ligand binding proteins of Proteobacteria and derived taxa. Our framework also highlighted a strong peptidic signal in unassigned and unmatched spectra, information that is currently not captured by the pipelines employed in this study. Taken together, this work points to specific areas for optimisation in chromatography and mass spectrometry to adequately characterise SOM‐associated metaproteomes. [ABSTRACT FROM AUTHOR]

We have developed a novel chemical sensing technique termed high asymmetric longitudinal field ion mobility spectrometry (HALF-IMS), which allows separation of ions based on mobility differences in high and low electric fields. Our device is microfabricated, has a miniature format, and uses exceptionally low power due to the lack of RF separation fields normally associated with ion mobility spectrometry (IMS) or differential mobility spectrometry (DMS). It operates at room temperature and atmospheric pressure. This HALF-IMS chip contains a microscale drift cell where spatially varying electric field regions of high and low strengths are generated by direct current (DC) applied to the electrodes that are physically placed to cause ionic separation as the ionized chemical flows along the drift cell. Power and complexity are reduced at the chip and system levels by reducing the voltage magnitude and using DC-powered electronics. A testing platform utilizing an ultraviolet (UV) photoionization source was used with custom electronic circuit boards to interface with the chip and provide data inputs and outputs. Precise control of the electrode voltages allowed filtering of the passage of the ion of interest through the drift cell, and ionic current was measured at the detector. The device was tested by scanning of electrode voltages and obtaining ion peaks for methyl salicylate, naphthalene, benzene, and 2-butanone. The current experimental setup was capable of detecting as low as ∼80 ppb of methyl salicylate and naphthalene. The use of benzene as a dopant with 2-butanone allowed one to see two ion peaks, corresponding to benzene and 2-butanone.

• Fine-grained street dust is most enriched in heavy metals and magnetic particles. • Iron is the most abundant in the residual fraction followed by reducible fraction. • Residual and reducible fractions bind a considerable percentage of heavy metals. • Hematite, metallic iron, and iron carbides are distinctive street dust components. Street dust is one of the most important carriers of heavy metals (HMs) originating from natural and anthropogenic sources. The main purpose of the work was to identify which of Fe-bearing phases bind HMs in street dust. Magnetic parameters of the Fe-bearing components, mainly magnetically strong iron oxides, are used to assess the level of HM pollution. Chemical sequential extraction combined with magnetic methods (magnetic susceptibility, magnetization, remanent magnetization) allowed determining the metal-bearing fractions and identifying the iron forms that are mostly associated with traffic-related HMs. The use of Mössbauer spectrometry (MS) supplemented by magnetic methods (thermomagnetic curves and psarameters of hysteresis loops) enabled precise identification and characterization of iron-containing minerals. The classification of HMs into five chemical fractions differing in mobility and bioaccessibility revealed that iron is most abundant (over 95%) in the residual fraction followed by the reducible fraction. HMs were present in reducible fraction in the following order: Pb>Zn>Mn>Cr>Ni>Fe>Cu, while they bound to the residual fraction in the following order: Fe>Ni>Cr>Mn>Pb>Cu>Zn. The signature of the anthropogenic origin of street dust is the presence of strongly nonstoichiometric and defected grains of magnetite and their porous surface. Magnetite also occurs as an admixture with maghemite, and with a significant proportion of hematite. A distinctive feature of street dust is the presence of metallic iron and iron carbides. Magnetic methods are efficient in the screening test to determine the level of HM pollution, while MS helps to identify the iron-bearing minerals through the detection of iron. [Display omitted] [ABSTRACT FROM AUTHOR]

This study quantified the C content of the chemical and physical fractions of SOM in different management systems in an Argisoil of sandy texture. The study was carried out in a reference area of Native Forest (NF), and in three managed areas: Permanent Pasture (PP), No-Tillage System (NTS) and an area of Private Natural Heritage Reserve (PNHR) in the process of natural regeneration. Soil samples were collected in the layers 0.0-0.05, 0.05-0.10 and 0.10-0.20 m. We assessed the soil density (Sd), total organic carbon (TOC) content, chemical fractionation of SOM with determination of the C contents of the fulvic acids (FA), humic acids (HA) and humin (HUM), with subsequent calculations of the HA/FA ratios, AE/HUM, stock (StockC), physical granulometric fractionation and determination of C contents of particulate organic matter (C-POM) and carbon management index (CMI). Higher TOC contents were observed for the NF area. The C-HA and C-HUM contents were higher in the NF and NTS. NF showed higher C-POM levels in all layers evaluated. For the C-MOM, the NTS area was superior to the other managed areas. The managed areas had lower StockPOM values than the NF. The managed areas had lower CMI values in relation to NF. The NTS area showed that, even in crop succession, it contributes to the improvement of the soil organic fraction over the adoption time. On the other hand, the areas of PP and PNHR showed that inadequate management favors the reduction of edaphic quality.

The marine environment is a rich source of biodiversity, including microorganisms that have proven to be prolific producers of bioactive secondary metabolites. Arctic seas are less explored than warmer, more accessible areas, providing a promising starting point to search for novel bioactive compounds. In the present work, an Arctic marine Pseudomonas sp. belonging to the Pseudomonas (P.) fluorescence group was cultivated in four different media in an attempt to activate biosynthetic pathways leading to the production of antibacterial and anticancer compounds. Culture extracts were pre-fractionated and screened for antibacterial and anticancer activities. One fraction from three of the four growth conditions showed inhibitory activity towards bacteria and cancer cells. The active fractions were dereplicated using molecular networking based on MS/MS fragmentation data, indicating the presence of a cluster of related rhamnolipids. Six compounds were isolated using HPLC and mass-guided fractionation, and by interpreting data from NMR and high-resolution MS/MS analysis; the structures of the compounds were determined to be five mono-rhamnolipids and the lipid moiety of one of the rhamnolipids. Molecular networking proved to be a valuable tool for dereplication of these related compounds, and for the first time, five mono-rhamnolipids from a bacterium within the P. fluorescence group were characterized, including one new mono-rhamnolipid.

Protein and peptide oligomers are thought to play important roles in the pathogenesis of a number of neurodegenerative diseases. For this reason, considerable effort has been devoted to understanding the oligomerization process and to determining structure-activity relationships among the many types of oligomers that have been described. We discuss here a method for producing pure populations of amyloid β-protein (Aβ) of specific sizes using the most pathologic form of the peptide, Aβ42. This work was necessitated because Aβ oligomerization produces oligomers of many different sizes that are non-covalently associated, which means that dissociation or further assembly may occur. These characteristics preclude rigorous structure-activity determinations. In studies of Aβ40, we have used the method of photo-induced cross-linking of unmodified proteins (PICUP) to produce zero-length carbon-carbon bonds among the monomers comprising each oligomer, thus stabilizing the oligomers. We then isolated pure populations of oligomers by fractionating the oligomers by size using SDS-PAGE and then extracting each population from the stained gel bands. Although this procedure worked well with the shorter Aβ40 peptide, we found that a significant percentage of Aβ42 oligomers had not been stabilized. Here, we discuss a new method capable of yielding stable Aβ42 oligomers of sizes from dimer through dodecamer.

Organic and inorganic mixtures can be developed as immobilizing agents that could reduce heavy metal accumulation in crops and contribute to food safety. Here, inorganic materials (lime, L; zeolite, Z; and sepiolite, S) and organic materials (biochar, B, and compost, C) were selectively mixed to produce six composite soil amendments (LZBC, LSBC, LZC, LZB, LSC, and LSB). Given the fact that LZBC showed the best performance in decreasing soil Cd availability in the incubation experiment, it was further applied in the field condition with 14 vegetables as the test crops to investigate its effects on crop safety production in polluted greenhouse. The results showed that LZBC addition elevated rhizosphere soil pH by 0.1–2.0 units and reduced soil Cd availability by 1.85–37.99%. Both the biomass and the yields of edible parts of all vegetables were improved by LZBC addition. However, LZBC addition differently affected Cd accumulation in edible parts of the experimental vegetables, with the observation that Cd contents were significantly reduced in Allium fistulosum L., Amaranthus tricolor L., and Coriandrum sativum Linn., but increased in the three species of Lactuca sativa. Further health risk assessment showed that LZBC application significantly decreased daily intake of metal (DIM), health risk index (HRI), and target hazard quotient (THQ) for Cd in Allium fistulosum L., Amaranthus tricolor L., and Coriandrum sativum Linn., whereas increased all the indexes in Lactuca sativa. Our results showed that the effect of a composite amendment on Cd accumulation in different vegetables could be divergent and species-dependent, which suggested that it is essential to conduct a pre-experiment to verify applicable species for a specific soil amendment designed for heavy metal immobilization. [ABSTRACT FROM AUTHOR]

In a soil ecosystem irrigated with low-quality water out at El-Rahway village, Giza Governorate, Egypt, a completely randomized field trial was carried out to assess the suitability of some soil biochemical remediation technologies on minimizing the inorganic contaminants hazards, their bioavailability as well as the relationship between potential toxic elements (PTEs) distribution in remediated soil ecosystem, the bioavailability index (BI) and pollutants uptake by cultivated hyperaccumulated plants. Turnip Brassica rapa and radish Raphanus sativus were separately cultivated in the contaminated after being enriched with elemental sulfur (T1), elemental sulfur fortified with a mixture of Thiobacillus Thiooxidans and Thiobacillus ferrooxidans (T2), rock phosphate impregnated with phosphate dissolving bacteria (PDB) (T3), bentonite inoculated with Pseudomonas fluorescence (T4), kaolinite associated with Pseudomonas fluorescence (T5), sulfur mixed with rock phosphate and inoculated with a mixture of Thiobacillus thiooxidans, Thiobacillus ferrooxidans and phosphate dissolving bacteria (PDB) (T6), a mixture of bentonite and kaolinite inoculated with Pseudomonas fluorescence (T7) and a combined mixture of bentonite, kaolinite and rock phosphate inoculated with Pseudomonas fluorescence and phosphate dissolving bacteria (PDB) (T8), as well as control treatments represented by cultivated untreated soil ecosystem. Results implied that the concentration of most contaminants was found in F6 (Residual form) in control cultivated, decreased, T1, T2, and increased in the treatments supplied with modified clay minerals. Results also emphasized that T8 is the best management practice in the remediation of targeted inorganic contaminants grown in a contaminated soil ecosystem cultivated with radish or turnip plants that showed the lowest values compared to other trailed treatments. The combination of phytoremediation and chemo-biological techniques was very effective in minimizing the hazards of PTEs bioavailability and the distribution of the inorganic contaminants, and BI was verified to be promising tools in evaluating soil remediation. [ABSTRACT FROM AUTHOR]

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Tellurium is a technology-critical element (TCE), with relatively limited data on its behavior in the environment, especially the pedosphere. As with other TCEs, its more widespread use, especially in new energy sources, might lead to Te spillage during production or in the eventual waste. Investigation of tellurium's interaction with soil is a necessary step in the research into the physiochemical transformation and determining the mobility of different tellurium species. To broaden the hitherto scarce knowledge of tellurium behavior in the soil environment, selected soluble tellurium compounds were introduced into different types of well-characterized soil (content of fertilizers, organic matrix, clay minerals, Mn, Fe, pH). The study of Te(IV) and Te(VI) sorption indicated that after 7 days the sorption is quantitative and close to 100%. Addition of Fe 2 O 3 to a soil deficient in Mn and Fe increases its sorption potential by about 10 percentage points. Based on fractionation study (0.11 mol L -1 CH 3 COOH, 0.1 mol L -1 ascorbic acid in oxalate buffer (pH 3), 30% H 2 O 2 at 85 °C followed by 0.5 mol L -1 CH 3 COONH 4 ), it was shown that the presence of Mn/Fe (oxyhydr)oxides plays an essential role in the mobility of Te, especially Te(VI), regardless of the soil type. In the soil poor in reducible fraction and rich in organic matrix (peat), the organic fraction was responsible for the immobilization of Te, especially Te(IV). Extraction of the mobile fraction after incubation in the presence of DI water (Te extraction: 7-8%), oxalic acid (5-7%) or citric acid (6%) (mimicking rhizosphere activity) indicated that these did not play a significant role in Te retention. Nevertheless, soil modification with biocarbon limited the effect of citrates on Te mobilization. This knowledge is fundamental, i.e. in the context of soil remediation processes and counteracting the migration of Te in the environment from anthropogenic sources (e.g. solar farms)., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)

Wastewater effluent is the main contributor of psychiatric pharmaceuticals (PPs) pollution in surface waters. However, little is known about its spatial evolution dynamics in effluent-dominated rivers. Herein, 10 representative PPs, including 6 chiral pharmaceuticals and 4 achiral pharmaceuticals, were explored in the Beiyun River, a typical wastewater effluent-dominated river, to explore their occurrence, in-stream attenuation and enantioselective fractionation behaviors at a watershed scale. Among the target substances, 8 and 9 drugs were detected in surface water and sediment samples with the ΣPPs concentrations ranging from 78.4 to 260.1 ng/L and 4.8 to 43.4 ng/g dw in surface water and sediments, respectively. Along the mainstream of the Beiyun River, only several PPs detected in surface water, e.g., citalopram, O-demethylvenlafaxine, and fluoxetine, exhibited in-stream attenuation behaviors when reaching rural area, while all PPs detected in sediments displayed in-stream attenuation behavior. Four chiral PPs detected in surface water exhibited an enantioselective attenuation phenomenon, while in sediments, only citalopram displayed an enantioselective fractionation behavior. The differences in the in-stream attenuation and enantioselective environmental behavior of individual PPs caused complex contaminant evolution along the stream reach. This work provides enantiomeric profiles of chiral pollutants for evaluating their in-stream attenuation processes, which would facilitate better understanding of the changing contaminant exposure conditions in complex natural environments., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

This study aimed to fractionate and characterize the protein-rich polysaccharide-protein (PSP) complexes from a well-known edible mushroom, Lentinula edodes, and assess their nutritional and immunostimulatory properties. Crude PSP isolated from the mushroom water extract was purified by anion exchange chromatography, yielding fractions PSP-F1 and PSP-F2 containing 66.1 % and 74.0 % protein, respectively. Both fractions exhibited primarily β-sheet and random-coil protein structures, though the crude PSP fraction exhibited an additional α-helix structure. On SDS-PAGE, PSP-F1 showed two molecular weight bands, one below 10 kDa and another at 34 kDa, and PSP-F2 showed several bands, one below 10 kDa and others between 34 and 95 kDa. The nutritional value of essential and non-essential amino acid profiles was in the order of PSP-F2 > PSP-F1 > crude PSP; the amino acid ratio coefficient values of the crude PSP, PSP-F1, and PSP-F2 were 63 %, 67 %, and 72 %, respectively. The combination of PS and PSP fractions exhibited stronger immunoactivity than PSP-F1 or PSP-F2 alone. PSP-F2 showed a higher immunostimulatory activity than PSP-F1 in RAW264.7 cell culture. PSP-F2 was also more abundant of easily absorbed high-quality proteins. The results provide useful references for dietary and medicinal uses of PSP fractions in L. edodes and other edible mushrooms., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Jian Yong WU reports was provided by The Hong Kong Polytechnic University. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Molybdenum (Mo) contamination of farmland soils poses health risks due to Mo accumulation in crops like rice. However, the mechanisms regulating soil availability and plant uptake of Mo remain poorly understood. This study investigated Mo uptake by rice plants, focusing on Mo speciation and isotope fractionation in soil and rice plants. Soil Mo species were identified as sorbed Mo(VI) and Fe-Mo(VI) using X-ray absorption spectroscopy (XAS). Soil submergence during rice cultivation led to the reductive dissolution of Fe-associated Mo(VI) while increasing sorbed Mo(VI) and Ca-Mo(VI). Soil Mo release to soil solution was a dynamic process involving continuous dissolution/desorption and re-precipitation/sorption. Mo isotope analysis showed soil solution was consistently enriched in heavier isotopes during rice growth, attributed to re-sorption of released Mo and the uptake of Mo by rice plants. Mo was significantly associated with Fe in rice rhizosphere as sorbed Mo(VI) and Fe-Mo(VI), and around 60 % of Mo accumulated in rice roots was sequestrated by Fe plaque of the roots. The desorption of Mo from Fe hydroxides to soil solution and its subsequent diffusion to the root surface were the key rhizosphere processes regulating root Mo uptake. Once absorbed by roots, Mo was efficiently transported to shoots and then to grains, resulting in heavier isotope fractionation during the translocation within plants. Although Mo translocation to rice grains was relatively limited, human exposure via rice consumption remains a health concern. This study provides insights into the temporal dynamics of Mo speciation in submerged paddy soil and the uptake mechanisms of Mo by rice plants., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Shan-Li Wang reports financial support was provided by National Science and Technology Council. Shan-Li Wang reports a relationship with National Synchrotron Radiation Research Center that includes: non-financial support. Shan-Li Wang reports a relationship with National Synchrotron Light Source II that includes: non-financial support. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper, (Copyright © 2024 Elsevier B.V. All rights reserved.)

Co-fractionation mass spectrometry (CF-MS) uses biochemical fractionation to isolate and characterize macromolecular complexes from cellular lysates without the need for affinity tagging or capture. In recent years, this has emerged as a powerful technique for elucidating global protein-protein interaction networks in a wide variety of biospecimens. This review highlights the latest advancements in CF-MS experimental workflows including machine learning-guided analyses, for uncovering dynamic and high-resolution protein interaction landscapes with enhanced sensitivity, accuracy and throughput, enabling better biophysical characterization of endogenous protein complexes. By addressing challenges and emergent opportunities in the field, this review underscores the transformative potential of CF-MS in advancing our understanding of functional protein interaction networks in health and disease., Competing Interests: Declaration of competing interest The authors declare no conflict of interest., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

Measurements of stable isotope ratios in organic compounds are widely used tools for plant ecophysiological studies. However, the complexity of the processes involved in shaping hydrogen isotope values (δ 2 H) in plant carbohydrates has limited its broader application. To investigate the underlying biochemical processes responsible for 2 H fractionation among water, sugars, and cellulose in leaves, we studied the three main CO 2 fixation pathways (C 3 , C 4 , and CAM) and their response to changes in temperature and vapor pressure deficit (VPD). We show significant differences in autotrophic 2 H fractionation (ε A ) from water to sugar among the pathways and their response to changes in air temperature and VPD. The strong 2 H depleting ε A in C 3 plants is likely driven by the photosynthetic H + production within the thylakoids, a reaction that is spatially separated in C 4 and strongly reduced in CAM plants, leading to the absence of 2 H depletion in the latter two types. By contrast, we found that the heterotrophic 2 H-fractionation (ε H ) from sugar to cellulose was very similar among the three pathways and is likely driven by the plant's metabolism, rather than by isotopic exchange with leaf water. Our study offers new insights into the biochemical drivers of 2 H fractionation in plant carbohydrates., (© 2024 The Author(s). New Phytologist © 2024 New Phytologist Foundation.)

1,5,9-epideoxyloganic acid (ELA) was isolated from the aerial parts of endemic Nepeta aristata Boiss Et Kotschy Ex Boiss crude extract (methanol:chloroform) using silica gel (hexane, chloroform, ethyl acetate, and methanol) and sephadex LH-20 (65% methanol-35% chloroform) columns. Activity-guided isolation was performed on methanol sub-fractions with DNA protection and enzyme inhibitory activities, and then the ELA was purified by prep -HPLC. The ELA structure, bio-guided isolate, was determined via 1 H NMR, 13 C NMR, and MS spectrometry. ELA's enzyme inhibition and DNA protection activities were investigated and compared with standard drugs. The inhibition capacity of ELA against acetylcholinesterase (AChE), butyrylcholinesterase (BChE), urease, carbonic anhydrase (CA), α-glucosidase, α-amylase, lipase, and tyrosinase enzymes was evaluated by kinetic and molecular docking results. The ELA displayed the best inhibitory activity on AChE, BChE, α-glucosidase, urease, α-amylase, and tyrosinase with IC 50 values of 2.53 ± 0.27, 3.75 ± 0.11, 3.98 ± 0.07, 4.40 ± 0.01, 6.43 ± 0.54 and 7.39 ± 0.00 µg/mL, respectively. ELA acted as a competitive inhibitor against BChE and α-glucosidase and a non-competitive inhibitor against AChE. The ELA's binding affinity values on AChE, BChE, and α-glucosidase were -7.70, -8.50, and -8.30 kcal/mol, respectively. DNA protection activity of the ELA molecule was determined as 57.53% for form I and 53.57% for form II. In conclusion, the inhibitory activity of ELA demonstrated its effectiveness in terms of its suitability in the pharmaceutical industry.Communicated by Ramaswamy H. Sarma.

A green strategy employing water as solvent has been adopted to obtain protein hydrolysates from fish meal (FM), its water-soluble fraction (WSP), and its non-water-soluble fraction (NSP). The techno-functional properties of the hydrolysates have been investigated and compared to hydrolysates obtained with Alcalase®. In general, SWH hydrolysates presented higher content of free amino acids and higher degree of hydrolysis, which reflected on the molecular size distribution. However, Alcalase® hydrolysates presented better solubility (from 74 ± 4% for NSP at pH = 2 up to 99 ± 1% for WSP at pH = 4-7). According to fluorescence experiments, FM and NSP hydrolysates showed the highest surface hydrophobicity, which has been related to better emulsifying properties and higher emulsion stability. The emulsions stabilized with 2%wt. of SWH-treated NSP showed the smallest particle sizes, with D[4,3] = 155 nm at day 0, and good stability, with D[4,3] = 220 nm at day 7, proving that water fractionation followed by SWH treatment is a good method to improve the techno-functional properties of the hydrolysates., Competing Interests: Declaration of competing interest Authors declare no conflict of interest., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

The abundance of biodegradable microplastics (BMPs) is increasing in soil due to the widespread use of biodegradable plastics. However, the influence of BMPs on soil metal biogeochemistry, especially arsenic (As), under different water regimes is still unclear. In this study, we investigated the effects of two types of BMPs (PLA-MPs and PBAT-MPs) on As fractionation in two types of soils (black soil and fluvo-aquic soil) under three water regimes including drying (Dry), flooding (FL), and alternate wetting and drying (AWD). The results show that BMPs had limited indirect effects on As fractionation by altering soil properties, but had direct effects by adsorbing and releasing As during their degradation. Enzyme degradation experiments show that the degradation of PLA-MPs led to an increased desorption of 4.76 % for As(III) and 15.74 % for As(V). Synchrotron-based X-ray fluorescence (μ-XRF) combined with micro-X-ray absorption near edge structure (μ-XANES) analysis show that under Dry and AWD conditions, As on the BMPs primarily bind with Fe hydrated oxides in the form of As(V). Conversely, 71.57 % of As on PBAT-MP under FL conditions is in the form of As(III) and is primarily directly adsorbed onto its surface. This study highlights the role of BMPs in soil metal biogeochemistry., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Rice consumption is a major pathway for human cadmium (Cd) exposure. Understanding Cd behavior in the soil-rice system, especially under field conditions, is pivotal for controlling Cd accumulation. This study analyzed Cd concentrations and isotope compositions (δ 114/110 Cd) in rice plants and surface soil sampled at different times, along with urinary Cd of residents from typical Cd-contaminated paddy fields in Youxian, Hunan, China. Soil water-soluble Cd concentrations varied across sampling times, with δ 114/110 Cd water lighter under drained than flooded conditions, suggesting supplementation of water-soluble Cd by isotopically lighter Cd pools, increasing Cd phytoavailability. Both water-soluble Cd and atmospheric deposition contributed to rice Cd accumulation. Water-soluble Cd's contribution increased from 28-52% under flooded to 58-87% under drained conditions due to increased soil Cd phytoavailability. Atmospheric deposition's contribution (12-72%) increased with potential atmospheric deposition flux among sampling areas. The enrichment of heavy Cd isotopes occurred from root-stem-grain to prevent rice Cd accumulation. The different extent of enrichment of heavy isotopes in urine indicated different Cd exposure sources. These findings provide valuable insights into the speciation and phytoavailability changes of Cd in the soil-rice system and highlight the potential application of Cd isotopic fingerprinting in understanding the environmental fate of Cd., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

An integrated chemical and mineralogical characterization approach was applied to smelter wastes collected from 50-year-old dump sites in Argentina. Characterization included pseudo-total element concentrations, acid generation/neutralization potential, sequential extractions, pH-dependent leaching kinetics, and mineralogical analysis of all residues. These analyses provided detailed information on the reactivity of the minerals in the waste material and associated metal release. Cadmium and Zn were the elements of greatest environmental concern due to their high mobility. On average, the release of Zn and Cd in pH-dependent leaching essays reached 17.6% (up to 5.24 mg g -1 ) and 52.7% (up to 0.02 mg g -1 ) of the pseudo-total content, respectively. Moreover, Cd and Zn were also the metals that showed the higher proportions of labile fractions associated to the adsorbed and exchangeable fraction (60-92% for Cd and 19-38% for Zn). Since Cd and Zn concentrations in the residue are not high enough to form their own minerals, a large proportion of these elements would be weakly adsorbed on Fe oxyhydroxides. In contrast, the low release of Cu, Pb and Fe would be associated with these elements being incorporated into the crystalline structure of insoluble or very poorly soluble minerals. Lead is incorporated into plumbojarosite and anglesite. Copper was mainly in association with Fe oxyhydroxides and may also have been incorporated into the plumbojarosite structure. The latter could act as a sink especially for Pb under the acidic conditions of the smelter residue. Despite the elevated concentrations of Pb observed in the residue, it showed a very low mobility (≈0.1%), indicating that it is mostly stabilized. Nevertheless, the smelter residue is a continuous source of metals requiring remediation., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)

Mussels are commonly used as bioarchives in environmental monitoring, yet the impact of vital effects on the trace element or isotope ratios used as biogeochemical proxies is often only ill constrained. A prime example of such trace elements are the Rare Earth elements and Yttrium (REY) which have become (micro)contaminants in freshwater systems worldwide. We here report on the distribution of REY in different soft tissues and in the shells of freshwater bivalve A. anatina, commonly known as "duck mussel", from the Danube River in Hungary and the Vistula River in Poland. Both rivers are contaminated with anthropogenic Gd from contrast agents used in magnetic resonance imaging (MRI). Regardless of the mussels' origin, all of their compartments show very similar shale-normalised REY patterns. None of the samples show any anthropogenic Gd anomaly, implying that in freshwater anthropogenic Gd from MRI contrast agents is either not bioavailable or that REY from ambient river water are insignificant for the REY budget of freshwater mussels. Compared to ambient water, the bivalves bioaccumulate the REY with preferential uptake of Ce and of light REY over heavy REY. However, REY concentrations in mussels are similar to or lower than those in their potential food source, with minor fractionation along the REY series besides slight preferential uptake of La and Y. Comparison of shells and tissues reveals the systematic oxidative decoupling of Ce from its REY neighbours, probably due to the presence of Ce(IV) solution-complexes in the mussels' extrapallial fluid. Despite possible REY fractionation during their initial uptake, vital effects do not impose any major control on REY fractionation during REY transfer within the mussels or during formation of their shells. Mussel shells may, therefore, conveniently be used for environmental monitoring of REY without major disturbance from vital effects., Competing Interests: Declaration of competing interest We, the authors, declare that we have no conflicts of interest to this work. There are no commercial or associative interests that could pose a conflict of interest in connection with the submitted research., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

• Phosphorus in rice straw mainly exists in OP and NAIP, and K as WSK. • By high temperature pyrolysis, more HCl-P was converted from OP and NaOH-P. • The volatilization was mainly at 200–500 °C for P and 500–900 °C for K. • The most suitable for use as P and K fertilizer was the 600 °C biochar. Biochar is an excellent soil amendment, but its fertilizer effect on the soil is often overlooked. In this study, a series of experiments were conducted to investigate the form changes of P (phosphorus) and K (potassium) in rice straw biochar at different pyrolysis temperatures and explore its fertilizer effect characteristics. The results showed that in the rice straw, P was mainly in the form of OP (organophosphorus) and NaOH-P (NaOH extractable phosphorus), and K as WSK (water-soluble potassium). For biochars, the various forms of P at 100–200 °C and K at 100–300 °C were basically unchanged; OP in rice straw biochar decreased gradually from 200 °C to 800 °C; at 200–1000 °C, NaOH-P in biochar gradually decreased, with 9.1 % of P (wt%) at 1000 °C; HCl-P (HCl extractable phosphorus) with more bioavailable, which was mainly converted from NaOH-P and OP, increased gradually from 6.8 % to 50.9 % for P (wt%) at 200–1000 °C. At 100–500 °C, the change of TK (total potassium) was slight; from 500 °C to 900 °C, WSK decreased from 84.7 % to 23.2 % for K (wt%); at 700–1100 °C, the ASK (acid-soluble K) was relatively high, with K (wt%) of 10.6–11.6 %. The volatilization was mainly at 200–500 °C for P and 500–900 °C for K, which volatilization rates were 5.6–30.3 % and 6.3–58.9 %, respectively. Moreover, HCl-P increased from 0.167 mg/g for the raw straw to 4.554 mg/g for the 1000 °C biochar and TK from 3.632 mg/g for the rice straw to 20.91 mg/g for the 600 °C biochar. It can be concluded that the biochars at 400–700 °C were suitable for use as a slow-release P fertilizer and K fertilizer. This work provides a strong basis for using a rice straw biochar at different temperatures as a P and K fertilizer. Capsule: By pyrolysis, the rice straw biochar contains more HCl-P and TK, and can be used as slow-release P fertilizer and K fertilizer. [ABSTRACT FROM AUTHOR]

The aim of this work was to determine the optimal conditions to fractionate a marjoram extract using supercritical antisolvent precipitation (SAS) technology in order to improve its antioxidant activity. This activity was evaluated using a cellular antioxidant assay (CAA) and compared to a chemical method (ABTS). After extract fractionation, most of the phenolics were recovered in the precipitate, except for the less polar ones that were found in the separators, along with essential oil components, non-volatile terpenes and fatty acids. Precipitate fractions obtained at 40 °C and 20–25 MPa showed the best TEAC values (1.7 mmol Trolox/g extract). Nevertheless, no precipitate fraction exerted better CAA than the unfractionated extract. This activity was related to the presence of arbutin and rosmarinic acid in their composition. In contrast, separators showed a low TEAC value (0.3 mmol Trolox/g), but a higher cellular antioxidant activity, especially fractions obtained at 15–20 MPa and 40–50 °C. This enhanced antioxidant activity was mainly attributed to the presence of ursolic acid, sterubin, menthol, sabinene hydrate and terpineol, compounds with a less polar character that therefore could cross more easily the cell membrane and exert their antioxidant activity inside the cells. Thus, separator fractions obtained at 20 MPa and 40 °C increased a 30% the CAA value respect to UAE extract and could be used for designing nutraceuticals or functional foods with cellular antioxidant activity. Precipitate fractions, at these extraction conditions, also showed an increase in TEAC value (40%) and could be employed as natural antioxidants in food formulations. [Display omitted] • Supercritical antisolvent precipitation allows the fractionation of plant extracts. • 20 MPa at 40 °C turned out to be the best fractionation conditions. • Improved antioxidant activity is obtained in both fractions. • Cellular antioxidant activity provides more accurate results than chemical methods. [ABSTRACT FROM AUTHOR]

The health effects of trace metal elements in atmospheric fine particulate matter (PM 2.5) are widely recognized, however, the emission factor profiles and chemical fractionation of metal elements in different sources were poorly understand. In this study, sixteen metal elements, including Cd, Pb, V, Zn, Ba, Sb, As, Fe, Sr, Cr, Rb, Co, Mn, Cu, Ni and Sn from biomass burning, bituminite and anthracite combustion, as well as dust, were quantified. The results show different emission sources were associated with distinct emission profiles, holding important implications for source apportionment of ambient particulate metals. Specifically, Fe was the dominant metal species (28-1922 mg/kg) for all samples, and was followed by different metals for different samples. For dust, Mn (39.9 mg/kg dust) had the second-highest emission factor, while for biomass burning, it was Cr and Ba (7.5 and 7.4 mg/kg biomass , respectively). For bituminous coal combustion, the emission factor of Zn and Ba was 6.2 and 6.0 mg/kg bituminous , respectively, while for anthracite combustion the corresponding emission factor was 5.6 and 4.3 mg/kg anthracite , respectively. Moreover, chemical fractionation (i.e., the exchangeable, reducible fraction, oxidizable, and residual fraction) and the bioavailability index (BI) values of the metal elements from different sources were further investigated to reveal the link between different emission sources and the potential health risk. The findings from this study hold important implications for source apportionment and source-specific particulate metal-associated health effects. [Display omitted] [ABSTRACT FROM AUTHOR]

The bioavailable trace metals are closely related to environmental safety and human health, which might have different source characteristics from the total trace metals in soil. To identify such differences, 31 farmland soil samples were collected from a typical agricultural watershed in East China and analyzed for bioavailable trace metal sources by using chemical fractionation, linear regression, and receptor model. Results showed that the total concentrations of Pb, Cu, Zn, Cr, and Ni in the soils were 1.25–1.59 times higher than watershed background values, but they were all dominated by the residual fraction (63.39–86.36%) according to a modified Community Bureau of Reference (BCR) sequential extraction procedure. Both chemical fractionation and enrichment factors (EFs) indicated a major contribution of the natural source to the total trace metal concentrations in the soils. However, linear regressions revealed that 60.07–89.88% of the bioavailable Pb, Cu, Zn, and Ni concentrations were contributed by anthropogenic sources. Atmospheric deposition and livestock manure were identified as the two major anthropogenic sources, and their contributions were further estimated by using a multiple linear regression of absolute principal component scores (MLR-APCS) model. Together with natural contribution, atmospheric deposition could contribute 74.55–89.86% of bioavailable Pb, Cr, and Ni concentrations. Livestock manure contributed 85.54% of bioavailable Cu and 80.05% of bioavailable Zn concentrations, respectively. These results implied that the bioavailable trace metals were influenced by both anthropogenic and natural sources, but more influenced by anthropogenic sources for bioavailable Pb, Cu, Zn, and Ni in the soils. Special attention should be paid to bioavailable Pb when implementing effective pollution control strategies in this watershed. Moreover, the risk caused by bioavailable trace metal losses from soils to aquatic system should not be ignored. [ABSTRACT FROM AUTHOR]

The involvement of components of technogenic contamination in the bryophyte biomass is studied. The paper presents the results of chemical fractionation of aquatic (Calliergon giganteum) and terrestrial (Sphagnum girgensohnii, Pleurozium schreberi) moss samples in northern taiga ecosystems disturbed by radium mining in order to assess the barrier role of bryophytes in the migration of U, 226Ra and non-radioactive alkaline earth elements in polluted natural complexes. It was shown that the U content in fractions extracted from fresh moss biomass by 1 M CH3COONH4 (pH 7) and 0.1 M H2SO4 solutions accounted for 4–41% of its total content in bryophytes. Fractions extracted by the decomposition of moss samples with 30% H2O2 involved 46–55% U. Unlike uranium, the accumulative ability of bryophytes relative to alkali-earth elements is mainly related to the cation exchange. This is confirmed by the elevated content of group II elements in moss growing on soils with high content of exchangeable bases, as well as their higher content in "exchangeable" fractions extracted from bryophytes by 1 M CH3COONH4. Ba is extracted from bryophyte samples to the least degree compared to other elements. Its total content in 1 M CH3COONH4 and 0.1 M H2SO4 1 M fractions was 26–47% of its total content in moss. The total content of Ca, Mg, and Sr in these fractions was higher and accounted for 66–88%, while 226Ra content varied within 40–74% of the total metal content in the bryophytes. Thus, the intensity of the involvement of U, 226Ra, Ba, Ca, Mg, and Sr from contaminated environment in moss is different. U and Ba show the lowest biogeochemical mobility, which indicates significant barrier role of bryophytes relative to these elements. Based on increasing biogeochemical activity, the alkali earth elements can be arranged in the series Ba < 226Ra < Sr < Ca < Mg, which is confirmed by their concentration factors in mosses and is consistent with main tendencies of ion exchange in soils. [ABSTRACT FROM AUTHOR]

In recent years, studies of heavy metal air pollution have increasingly gone beyond determining total concentrations of individual toxic metals. Chemical fractionation of potentially toxic elements in airborne particles is becoming an important part of these studies. This review covers the articles that have been published over the last three decades. Attention was paid to the issue of atmospheric aerosol sampling, sample pretreatment, sequential extraction schemes and conditions of individual extractions. Geochemical forms of metals occurring in the air in urban areas were considered in detail. Based on the data sets from chemical fractionation of particulate matter samples by three sequential extraction procedures (SEPs)—Fernández Espinosa, BCR and Chester's—the compilation of the chemical distribution patterns of As, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb and Zn was prepared. The human health risk posed by these toxic and/or carcinogenic elements via inhalation of atmospheric particles was estimated for two categories of polluted urban areas: the commonly encountered pollution level and the high pollution level. [ABSTRACT FROM AUTHOR]

Interest in fruit juice extracts as nutraceuticals is constantly increasing due to their health-beneficial properties, mainly caused by polyphenols. However, the correlation between the various effects of fruit juice extracts and their individual composition, including anthocyanins and copigments, is unknown. Therefore, in the present study, eight red fruit juice extracts were prepared using XAD-7 column chromatography, followed by fractionation and identification of the different compounds as well as characterization of their health-promoting effects. The fruit juice extract of pomegranate, chokeberry, and cranberry showed the highest antimicrobial potential against food-borne pathogens. The highest antioxidant and cell proliferation-inhibiting potential was also found in the pomegranate extract. It can be assumed that pomegranate extracts, which are rich in copigments, especially hydrolyzable tannins, are suitable natural antioxidants and antimicrobial agents. Pomegranate extracts could be used as nutraceuticals or natural preservatives., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

To investigate the variation and fractionation of stable isotopes from irrigation water to soil, grapes, and wine, δ 2 H, δ 18 O, and δ 17 O in different samples from 10 regions in China were determined using a water isotope analyser. The values were significantly different among regions according to the chemometric analysis. All isotopes were significantly and positively correlated with irrigation water-soil and grape-wine. A significant water isotopic fractionation effect was observed from the irrigation water to the soil, grapes, and wine. Stable isotope distribution characteristics correlated with longitude, latitude, altitude, temperature, precipitation, station pressure and wind speed. The linear discriminant analysis (LDA), random forest (RF), support vector machine (SVM), and feed-forward neural network (FNN) models 58.33-100 %, 80-100 %, 53.33-100 %, and 73.33-100 % accurate for distinguishing the geographical origins of all samples from training and test data, respectively. These findings provide a theoretical basis for authenticating the geographic origin of Chinese wines using stable isotope analysis., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)

Lead isotope analysis is the main method to trace the sources and cycling of Pb in the biosphere system. The linchpin of such application hinges on the assumption that there is negligible or no biologically mediated isotopic fractionation of Pb occurs in the environment. However, recent measurements by high-precision multi-collector mass spectrometry revealed that biological isotope fractionation of heavy mass elements is a prevalent phenomenon. This study shows that compared with the Pb sources, the maize plant (Zea mays L.) organs exhibit a wider range of Pb isotope compositions and a depletion of radioactive Pb isotopes ( 206 Pb, 207 Pb, and 208 Pb). Moreover, three independent studies consistently indicate that the 206 Pb/ 207 Pb ratio of maize organs varies as root/leaf > stem/grain, reflecting a continuous loss of light Pb isotopes during transportation. The conventional wisdom fails to account for these phenomena, suggesting that maize may undergo Pb isotope fractionation during the absorption and transportation of Pb. However, compared with other non-traditional metal isotopes, Pb isotope exhibits a more significant fractionation magnitude. We tentatively attribute this fractionation to the Pb tolerance mechanism of maize and its selective absorption of various forms of Pb, which requires further research to validate. Findings from this study mandate caution in future Pb source tracing in plants using Pb isotope methods and open up applications in using Pb isotopic fractionation to track Pb uptake and transfer pathways and decipher the associated detoxification mechanisms in plants., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Abstract We propose a simple model of chondrule formation that is supported by our new experiments. With a laser-heating and inert-gas-cooling technique, we obtained evaporation and condensation pathways starting with chondritic compositions till ends, and extracted ‘relative volatilities’ of elements from them. Above boiling points, we observed numerous silicate droplets being ejected from collapsed cavities of vapor bubbles on the surface of molten sample, known as jet-droplets. We postulate jet-droplets as origin of chondrules. The formation mechanism of jet-droplets requires a dense and large solid body (>3 cm across), named ‘duston’, for chondrule precursors. Our chondrule formation model presumes dustons having CI-like composition. Upon boiling, a duston ejects jet-droplets from its molten surface and simultaneously forms an adiabatically expanding vapor cloud around it. The jet-droplets supercool and incorporate the supersaturated vapor and fine condensates while they travel through the cloud, thus completing their makeup as chondrules. The compositions and the mixing ratio of the three components (jet-droplet, vapor and condensate) can be exactly predicted by using relative volatilities of elements, given the chondrule composition to be fitted and the conditions: vaporization degree (VD) and redox state (f s ) of the duston. We attempt to reproduce bulk compositions of chondrules in total of 600. About 75% chondrules are successfully matched with specific combinations of VD and f s for each chondrule. The model altogether explains 3.5 features of chondrules: maximum size and size-frequency distribution; chemical variety; and textural variety.

In current study, the effect of various organic substances as bulking agents (BAs) including wheat straw, pistachio hull wastes, and tree leaves at different levels (10, 25, 45% v/v) were investigated on total concentration and chemical forms of Cu, Pb, Cr, and As in sewage sludge (SS) compost prepared by windrow method. According to the results, the composting process (with/without BAs), due to losses of SS mass and volume, increased the total concentration of heavy metals (HMs) compared to the un-composted SS sample (RSS). Evaluation of HMs chemical forms in prepared compost sample without BAs application (CSS) showed that the composting process reduced the mobility factor of As (from 28% to 20%), Pb (from 11.6% to 9.3%), and Cr (from 14.5% to 9.2%) compared to the RSS. Application of three BAs considerably decreased the mobility factor of As (17.5-18.8%), Pb (4.8-7.9%), and Cr (1.4-6.8%) compared to CSS and RSS. Changes of Cu mobility in prepared compost samples showed an unclear trend, however in some treatments, due to transferred organic fraction into exchangeable and carbonate fractions, increasing of this factor was obvious. Generally, the composting appeared to reduce As, Pb, and Cr availability by stabilizing the three metals and making them more stable and less mobile. In addition, the BAs application effect on HMs behavior of SS compost samples were so different and no specific kind of BAs can be recommended as a superior BAs in SS composting process.