67 results on '"Chat S"'
Search Results
2. Differences during the first lactation between cows cloned by somatic cell nuclear transfer and noncloned cows
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Montazer-Torbati, F., Boutinaud, M., Brun, N., Richard, C., Neveu, A., Jaffrézic, F., Laloë, D., LeBourhis, D., Nguyen, M., Chadi, S., Jammes, H., Renard, J.-P., Chat, S., Boukadiri, A., and Devinoy, E.
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- 2016
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3. Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
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Guyomar, C., primary, D'Urso, G., additional, Chat, S., additional, Giudice, E., additional, and Gillet, R., additional
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- 2021
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4. Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
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Guyomar, C., primary, D'Urso, G., additional, Chat, S., additional, Giudice, E., additional, and Gillet, R., additional
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- 2021
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5. Structure of translocated trans-translation complex on E. coli stalled ribosome.
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Guyomar, C., primary, D'Urso, G., additional, Chat, S., additional, Giudice, E., additional, and Gillet, R., additional
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- 2021
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6. Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
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Guyomar, C., primary, D'Urso, G., additional, Chat, S., additional, Giudice, E., additional, and Gillet, R., additional
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- 2021
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7. On Potentially Graphical Sequences of G−E(H)
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Bilal A. Chat S. Pirzada
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Discrete mathematics ,Applied Mathematics ,Analysis ,Mathematics - Published
- 2018
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8. Inter-relationships between DNA damage, ascorbic acid and glycaemic control in Type 2 diabetes mellitus
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Choi, S. W., Benzie, I. F. F., Lam, C. S. Y., Chat, S. W. S., Lam, J., Yiu, C. H., Kwan, J. J., Tang, Y. H., Yeung, G. S. P., Yeung, V. T. F., Woo, G. C., Hannigan, B. M., and Strain, J. J.
- Published
- 2005
9. On Potentially Graphical Sequences of G−E(H)
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Pirzada, Bilal A. Chat & S., primary
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- 2018
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10. Elongation factor G-ribosome complex captures in the absence of inhibitors.
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Mace, K., primary, Giudice, E., additional, Chat, S., additional, and Gillet, R., additional
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- 2018
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11. Recurrence Leiomyosarcoma of the Popliteal Vein: A Rare Soft Tissue Sarcoma
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Thanate Poosiripinyo, Sermsak Sukpanichyingyong, Krits Salang, Chat Sumananont, and Thanapon Chobpenthai
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Surgery ,RD1-811 - Abstract
Background. Leiomyosarcoma (LMS) is a soft tissue sarcoma that originates from smooth muscle cells and constitutes approximately 5–10% of all soft tissue sarcomas. Vascular LMS is the least common subtype of LMS. About one-third of vascular LMS is located in the extremities, most commonly in the saphenous vein (25%). Vascular LMS originating from the popliteal vein is very rare, and to the best of our knowledge, only nine cases have been reported to date. Case presentation. We herein report a case of a 49-year-old woman who presented with recurrence of a mass that was located at the posterior aspect of the right proximal leg and extended to the popliteal fossa. She had mild pain and intermittent claudication without a history of an edematous leg. The tissue diagnosis was LMS. Wide en bloc resection of the tumor, including the segment of the involved popliteal vein, was performed without venous reconstruction. The patient received no other adjuvant treatments. At the 16-month follow-up, she had good oncologic and functional outcomes. Conclusion. Vascular LMS at the popliteal vein is uncommon but should be considered as a differential diagnosis in a patient who presents with a mass at the popliteal fossa. The magnetic resonance imaging (MRI) and core needle biopsy were needed for a definite diagnosis. The mainstay of treatment is wide en bloc resection of the tumor, including the involved segment of the vein. Venous reconstruction after resection is unnecessary in chronic cases without a history of an edematous leg. Radiotherapy is an important adjuvant for local control when the surgical margins are close or positive. The role of chemotherapy in systemic management remains unclear.
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- 2023
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12. Overexpression of Enterococcus faecalis elr operon protects from phagocytosis
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Cortes Perez, Ng, Dumoulin, R, Gaubert, S, Lacoux, C, Bugli, Francesca, Martin, R, Chat, S, Piquand, K, Meylheuc, T, Langella, P, Sanguinetti, Maurizio, Posteraro, Brunella, Rigottier Gois, L, Serror, P., Bugli, Francesca (ORCID:0000-0001-9038-3233), Sanguinetti, Maurizio (ORCID:0000-0002-9780-7059), Posteraro, Brunella (ORCID:0000-0002-1663-7546), Cortes Perez, Ng, Dumoulin, R, Gaubert, S, Lacoux, C, Bugli, Francesca, Martin, R, Chat, S, Piquand, K, Meylheuc, T, Langella, P, Sanguinetti, Maurizio, Posteraro, Brunella, Rigottier Gois, L, Serror, P., Bugli, Francesca (ORCID:0000-0001-9038-3233), Sanguinetti, Maurizio (ORCID:0000-0002-9780-7059), and Posteraro, Brunella (ORCID:0000-0002-1663-7546)
- Abstract
Mechanisms underlying the transition from commensalism to virulence in Enterococcus faecalis are not fully understood. We previously identified the enterococcal leucine-rich protein A (ElrA) as a virulence factor of E. faecalis. The elrA gene is part of an operon that comprises four other ORFs encoding putative surface proteins of unknown function.
- Published
- 2015
13. Milk from dams fed an obesogenic diet combined with a high-fat/high-sugar diet induces long-term abnormal mammary gland development in the rabbit1
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Hue-Beauvais, C., primary, Koch, E., additional, Chavatte-Palmer, P., additional, Galio, L., additional, Chat, S., additional, Letheule, M., additional, Rousseau-Ralliard, D., additional, Jaffrezic, F., additional, Laloë, D., additional, Aujean, E., additional, Révillion, F., additional, Lhotellier, V., additional, Gertler, A., additional, Devinoy, E., additional, and Charlier, M., additional
- Published
- 2015
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14. Decreasing visual subitising performance with age
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Kumar, M., primary, Li, R. W., additional, Levi, D. M., additional, Chat, S. W., additional, and MacKeben, M., additional
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- 2010
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15. Nuclear and cytoplasmic maturation of canine oocytes related to in vitro denudation
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Chebrout, M, primary, De Lesegno, C Viaris, additional, Reynaud, K, additional, Chat, S, additional, and Chastant‐Maillard, S, additional
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- 2009
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16. Total en bloc spondylectomy is worth doing in complete paralysis spinal giant cell tumor, a minimum 1-year follow-up
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Permsak Paholpak, Apiruk Sangsin, Winai Sirichativapee, Taweechok Wisanuyotin, Weerachai Kosuwon, Chat Sumnanoont, Puntip Thammaroj, Piti Ungarreevittaya, Yuichi Kasai, Hideki Murakami, and Hiroyuki Tsuchiya
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Orthopedic surgery ,RD701-811 - Abstract
Objective: To investigate the neurological recovery of Frankel A spinal giant cell tumor (GCT) patients after they had received a Total En Bloc Spondylectomy (TES). Materials and Methods: We retrospectively recorded data of three patients (two females) with mobile spine GCT (T6, T10, and L2) Enneking stage III with complete paralysis before surgery, who had undergone TES in our institute from January 2018 to September 2020. The duration of neurologic recovery to Frankel E was the primary outcome. The intra-operative blood loss, operative time, operative-related complications, and the local recurrence were the secondary outcomes. Results: The duration of suffering from Frankel A to TES surgery was 2 months for the T6 patient, 3 weeks for the T10 patient, and 1 month for the L2 patient. Three patients had achieved full neurological recovery to Frankel E within 6 months after TES (T6 for 5 months, T10 for 3 months, and L2 for 3 months). The average blood loss was 2833.33 ml and the mean operative time was 400 min. Up until the last follow-up (13–25 months), no evidence of local recurrences had been found in any of the three patients. Conclusion: Frankel A spinal GCT patients can achieve full neurological recovery after TES, if the procedure is performed within 3 months after complete paraplegia. TES can effectively control any local recurrences.
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- 2021
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17. Milk from dams fed an obesogenic diet combined with a high-fat/high-sugar diet induces long-term abnormal mammary gland development in the rabbit.
- Author
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Beauvais, C. Hue-, Koch, E., Chavatte-Palmer, P., Galio, L., Chat, S., Letheule, M., Rousseau-Ralliard, D., Jaffrezic, F., Laloë, D., Aujean, E., Révillion, F., Lhotellier, V., Gertler, A., Devinoy, E., and Charlier, M.
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MILK ,RABBIT feeding & feeds ,MAMMARY glands ,ANIMAL nutrition ,ANIMAL development ,PHENOTYPES - Abstract
Alterations to the metabolic endocrine environment during early life are crucial to mammary gland development. Among these environmental parameters, the initial nutritional event after birth is the consumption of milk, which represents the first maternal support provided to mammalian newborns. Milk is a complex fluid that exerts effects far beyond its immediate nutritional value. The present study, therefore, aimed to determine the effect of the nutritional changes during the neonatal and prepubertal periods on the adult mammary phenotype. Newborn rabbits were suckled by dams fed a high-fat/high-sugar obesogenic (OD) or a control (CON) diet and then subsequently fed either the OD or CON diets from the onset of puberty and throughout early pregnancy. Mammary glands were collected during early pregnancy (Day 8 of pregnancy). Rabbits fed with OD milk and then subjected to an OD diet displayed an abnormal development of the mammary gland: the mammary ducts were markedly enlarged (P < 0.05) and filled with abundant secretory products. Moreover, the alveolar secretory structures were disorganized, with an abnormal aspect characterized by large lumina. Mammary epithelial cells contained numerous large lipid droplets and exhibited fingering of the apical membrane and abnormally enlarged intercellular spaces filled with casein micelles. Leptin has been shown to be involved in modulating several developmental processes. We therefore analyzed its expression in the mammary gland. Mammary leptin mRNA was strongly expressed in rabbits fed with OD milk and subjected to an OD diet by comparison with the CON rabbits. Leptin transcripts and protein were localized in the epithelial cells, indicating that the increase in leptin synthesis occurs in this compartment. Taken together, these findings suggest that early-life nutritional history, in particular through the milking period, can determine subsequent mammary gland development. Moreover, they highlight the potentially important regulatory role that leptin may play during critical early-life nutritional windows with respect to long-term growth and mammary function. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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18. Clinical evaluation of the Shin-Nippon SRW-5000 autorefractor in children
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Chat, S, primary
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- 2001
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19. Prognostic and risk factors in patients with metastatic bone disease of an upper extremity
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Taweechok Wisanuyotin, Winai Sirichativapee, Chat Sumnanoont, Permsak Paholpak, Pat Laupattarakasem, Kamonsak Sukhonthamarn, and Weerachai Kosuwon
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Diseases of the musculoskeletal system ,RC925-935 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: The aim of this study was to evaluate survival of metastatic bone disease of an upper extremity, and to identify the prognostic factors that influence survival. Methods: Patients with metastatic bone disease of an upper extremity between 2008 and 2015 were reviewed from the database of a tertiary university hospital. Results: Of 102 patients, 48 males and 54 females with a median age of 61 (range, 28–82 years), the humerus (64.7%), clavicle (13.7%), and scapula (12.7%) were the common sites for bone metastasis of an upper extremity. Fifty-nine (57.8%) presented with pathologic fracture. No history of cancer was found in 76.5% of patients. The mean onset of metastatic bone disease after the first diagnosis of primary cancer was 4.74 ± 14.07 months (range, 0–84 months). Lung (31.4%) was the most common primary cancer followed by liver (14.7%), breast (12.7%), thyroid (7.8%), and renal (3.9%). Eighty-two cases (80.39%) died from the disease such that the median survival was 4.08 months (95% CI 2.57–6.17). The significant risk factors were the type of primary tumor (P
- Published
- 2018
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20. Tuberculous Distal Biceps Tendon Rupture: Case Report and Review of the Literature
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Artit Boonrod, Hiroyuki Sugaya, Norimasa Takahashi, Arunnit Boonrod, and Chat Sumananont
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Orthopedic surgery ,RD701-811 - Abstract
Tuberculous distal biceps tendon rupture is a rare condition in orthopedics. Musculoskeletal tuberculosis usually presents with bursitis, synovitis, myositis, and osteomyelitis, conditions which demonstrate an excellent response to antituberculosis chemotherapy. Tendon rupture is often associated with delayed diagnosis and treatment. We report a rare manifestation of musculoskeletal tuberculosis in the distal biceps tendon with delayed diagnosis.
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- 2018
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21. Interrater Reliability of the Postoperative Epidural Fibrosis Classification: A Histopathologic Study in the Rat Model
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Surachai Sae-Jung, Kitti Jirarattanaphochai, Chat Sumananont, Kriangkrai Wittayapairoj, and Kamolsak Sukhonthamarn
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Fibrosis ,Laminectomy ,Pathology ,Postoperative period ,Medicine - Abstract
Study DesignAgreement study.PurposeTo validate the interrater reliability of the histopathological classification of the post-laminectomy epidural fibrosis in an animal model.Overview of LiteratureEpidural fibrosis is a common cause of failed back surgery syndrome. Many animal experiments have been developed to investigate the prevention of epidural fibrosis. One of the common outcome measurements is the epidural fibrous adherence grading, but the classification has not yet been validated.MethodsFive identical sets of histopathological digital files of L5-L6 laminectomized adult Sprague-Dawley rats, representing various degrees of postoperative epidural fibrous adherence were randomized and evaluated by five independent assessors masked to the study processes. Epidural fibrosis was rated as grade 0 (no fibrosis), grade 1 (thin fibrous band), grade 2 (continuous fibrous adherence for less than two-thirds of the laminectomy area), or grade 3 (large fibrotic tissue for more than two-thirds of the laminectomy area). A statistical analysis was performed.ResultsFour hundred slides were independently evaluated by each assessor. The percent agreement and intraclass correlation coefficient (ICC) between each pair of assessors varied from 73.5% to 81.3% and from 0.81 to 0.86, respectively. The overall ICC was 0.83 (95% confidence interval, 0.81-0.86).ConclusionsThe postoperative epidural fibrosis classification showed almost perfect agreement among the assessors. This classification can be used in research involving the histopathology of postoperative epidural fibrosis; for example, for the development of preventions of postoperative epidural fibrosis or treatment in an animal model.
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- 2015
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22. Percutaneous Release of the Al Pulley Using a Modified Kirschner Wire: A Cadaveric Study
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Sukit Saengnipanthkul, Surachai Sae-Jung, and Chat Sumananont
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Orthopedic surgery ,RD701-811 - Abstract
Purpose. To evaluate the outcome of percutaneous release of the A1 pulley in 40 cadaveric fingers using a modified Kirschner wire. Methods. A 2.5-mm-diameter Kirschner wire measuring >12 cm in length was used. One end of the wire was sharpened into a ‘J’ shape using a grinder. The J-shaped tip featured a blunt, elongated lower tip, a sharp J-shaped curve, and a blunt upper tip. Completeness of A1 pulley release and injuries to the A2 pulley, flexor tendon, and neurovascular structures were evaluated in 40 cadaveric fingers. Results. Complete release of the A1 pulley was achieved in 8 index, 7 middle, 8 ring, and 8 little fingers, whereas incomplete release of the distal part was noted in 2 index, 2 middle, 2 ring, and one little fingers; release was missed in one middle and one little fingers. Injury to the A2 pulley was noted in 2 index fingers; the injury was minimal and limited to the proximal 2 mm of the A2 pulley. There was no flexor tendon or digital nerve injury in any finger.
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- 2014
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23. Intricate ribosome composition and translational reprogramming in epithelial-mesenchymal transition.
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Morin C, Baudin-Baillieu A, Van Long FN, Isaac C, Bidou L, Arbes H, François P, Pommier RM, Adrait A, Saku A, Gran-Ruaz S, Machkouri C, Vanbelle C, Morichon R, Boissan M, Catez F, Ferrari A, Morel AP, Couté Y, Chat S, Giudice E, Gillet R, Puisieux A, Moyret-Lalle C, Diaz JJ, Namy O, and Marcel V
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- Humans, Cellular Reprogramming, Epithelial-Mesenchymal Transition genetics, Ribosomes metabolism, Ribosomal Proteins metabolism, Ribosomal Proteins genetics, Protein Biosynthesis, Zinc Finger E-box-Binding Homeobox 1 metabolism, Zinc Finger E-box-Binding Homeobox 1 genetics
- Abstract
Epithelial-mesenchymal transition (EMT) involves profound changes in cell morphology, driven by transcriptional and epigenetic reprogramming. However, evidence suggests that translation and ribosome composition also play key roles in establishing pathophysiological phenotypes. Using genome-wide analyses, we reported significant rearrangement of the translational landscape and machinery during EMT. Specifically, a cell line overexpressing the EMT transcription factor ZEB1 displayed alterations in translational reprogramming and fidelity. Furthermore, using riboproteomics, we unveiled an increased level of the ribosomal protein RPL36A in mesenchymal ribosomes, indicating precise tuning of ribosome composition. Remarkably, RPL36A overexpression alone was sufficient to trigger the acquisition of mesenchymal features, including a switch in the molecular pattern, cell morphology, and behavior, demonstrating its pivotal role in EMT. These findings underline the importance of translational reprogramming and fine-tuning of ribosome composition in EMT., Competing Interests: Competing interests statement:The authors declare no competing interest.
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- 2024
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24. Structural insights into the binding of bS1 to the ribosome.
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D'Urso G, Chat S, Gillet R, and Giudice E
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- Molecular Conformation, RNA, Messenger metabolism, Ribosomal Proteins chemistry, Ribosomes metabolism, Escherichia coli metabolism, Escherichia coli Proteins metabolism
- Abstract
The multidomain ribosomal protein bS1 is the biggest and the most flexible and dynamic protein in the 30S small subunit. Despite being essential for mRNA recruitment and its primary role in the accommodation of the start codon within the decoding centre, there has not yet been a high-resolution description of its structure. Here, we present a 3D atomic model of OB1 and OB2, bS1's first two N-terminal domains, bound to an elongation-competent 70S ribosome. Our structure reveals that, as previously reported, bS1 is anchored both by a π-stacking to the 30S subunit and via a salt bridge with the Zn2+ pocket of bS1. These contacts are further stabilized by other interactions with additional residues on OB1. Our model also shows a new conformation of OB2, interacting with the Shine-Dalgarno portion of the mRNA. This study confirms that OB1 plays an anchoring role, but also highlights a novel function for OB2, which is directly involved in the modulation and support of mRNA binding and accommodation on the ribosome., (© The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research.)
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- 2023
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25. Insights into the ribosomal trans-translation rescue system: lessons from recent structural studies.
- Author
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D'Urso G, Guyomar C, Chat S, Giudice E, and Gillet R
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- Cryoelectron Microscopy, RNA, Bacterial chemistry, Codon, Terminator, RNA, Messenger metabolism, Protein Biosynthesis, Ribosomes metabolism
- Abstract
The arrest of protein synthesis caused when ribosomes stall on an mRNA lacking a stop codon is a deadly risk for all cells. In bacteria, this situation is remedied by the trans-translation quality control system. Trans-translation occurs because of the synergistic action of two main partners, transfer-messenger RNA (tmRNA) and small protein B (SmpB). These act in complex to monitor protein synthesis, intervening when necessary to rescue stalled ribosomes. During this process, incomplete nascent peptides are tagged for destruction, problematic mRNAs are degraded and the previously stalled ribosomes are recycled. In this 'Structural Snapshot' article, we describe the mechanism at the molecular level, a view updated after the most recent structural studies using cryo-electron microscopy., (© 2022 The Authors. The FEBS Journal published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies.)
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- 2023
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26. Substrate recognition and cryo-EM structure of the ribosome-bound TAC toxin of Mycobacterium tuberculosis.
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Mansour M, Giudice E, Xu X, Akarsu H, Bordes P, Guillet V, Bigot DJ, Slama N, D'urso G, Chat S, Redder P, Falquet L, Mourey L, Gillet R, and Genevaux P
- Subjects
- Bacterial Proteins chemistry, Bacterial Proteins genetics, Cryoelectron Microscopy, Molecular Chaperones genetics, RNA, Messenger genetics, Ribosomes, Antitoxins, Mycobacterium tuberculosis genetics
- Abstract
Toxins of toxin-antitoxin systems use diverse mechanisms to control bacterial growth. Here, we focus on the deleterious toxin of the atypical tripartite toxin-antitoxin-chaperone (TAC) system of Mycobacterium tuberculosis, whose inhibition requires the concerted action of the antitoxin and its dedicated SecB-like chaperone. We show that the TAC toxin is a bona fide ribonuclease and identify exact cleavage sites in mRNA targets on a transcriptome-wide scale in vivo. mRNA cleavage by the toxin occurs after the second nucleotide of the ribosomal A-site codon during translation, with a strong preference for CCA codons in vivo. Finally, we report the cryo-EM structure of the ribosome-bound TAC toxin in the presence of native M. tuberculosis cspA mRNA, revealing the specific mechanism by which the TAC toxin interacts with the ribosome and the tRNA in the P-site to cleave its mRNA target., (© 2022. The Author(s).)
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- 2022
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27. Capsicumicine, a New Bioinspired Peptide from Red Peppers Prevents Staphylococcal Biofilm In Vitro and In Vivo via a Matrix Anti-Assembly Mechanism of Action.
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Gomes Von Borowski R, Chat S, Schneider R, Nonin-Lecomte S, Bouaziz S, Giudice E, Rigon Zimmer A, Baggio Gnoatto SC, Macedo AJ, and Gillet R
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- Anti-Bacterial Agents chemistry, Humans, Methicillin-Resistant Staphylococcus aureus genetics, Methicillin-Resistant Staphylococcus aureus physiology, Microbial Sensitivity Tests, Peptides chemistry, Staphylococcal Infections microbiology, Anti-Bacterial Agents pharmacology, Biofilms drug effects, Capsicum chemistry, Methicillin-Resistant Staphylococcus aureus drug effects, Peptides pharmacology
- Abstract
Staphylococci are pathogenic biofilm-forming bacteria and a source of multidrug resistance and/or tolerance causing a broad spectrum of infections. These bacteria are enclosed in a matrix that allows them to colonize medical devices, such as catheters and tissues, and that protects against antibiotics and immune systems. Advances in antibiofilm strategies for targeting this matrix are therefore extremely relevant. Here, we describe the development of the Capsicum pepper bioinspired peptide "capsicumicine." By using microbiological, microscopic, and nuclear magnetic resonance (NMR) approaches, we demonstrate that capsicumicine strongly prevents methicillin-resistant Staphylococcus epidermidis biofilm via an extracellular "matrix anti-assembly" mechanism of action. The results were confirmed in vivo in a translational preclinical model that mimics medical device-related infection. Since capsicumicine is not cytotoxic, it is a promising candidate for complementary treatment of infectious diseases. IMPORTANCE Pathogenic biofilms are a global health care concern, as they can cause extensive antibiotic resistance, morbidity, mortality, and thereby substantial economic loss. So far, no effective treatments targeting the bacteria in biofilms have been developed. Plants are constantly attacked by a wide range of pathogens and have protective factors, such as peptides, to defend themselves. These peptides are common components in Capsicum baccatum (red pepper). Here, we provide insights into an antibiofilm strategy based on the development of capsicumicine, a natural peptide that strongly controls biofilm formation by Staphylococcus epidermidis, the most prevalent pathogen in device-related infections.
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- 2021
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28. Structures of tmRNA and SmpB as they transit through the ribosome.
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Guyomar C, D'Urso G, Chat S, Giudice E, and Gillet R
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- Binding Sites genetics, Cryoelectron Microscopy, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Models, Molecular, Nucleic Acid Conformation, Protein Binding, Protein Domains, RNA, Bacterial chemistry, RNA, Bacterial metabolism, RNA, Messenger chemistry, RNA, Messenger genetics, RNA, Messenger metabolism, RNA, Transfer chemistry, RNA, Transfer genetics, RNA, Transfer metabolism, RNA-Binding Proteins chemistry, RNA-Binding Proteins metabolism, Ribosomes metabolism, Ribosomes ultrastructure, Escherichia coli genetics, Escherichia coli Proteins genetics, Protein Biosynthesis genetics, RNA, Bacterial genetics, RNA-Binding Proteins genetics, Ribosomes genetics
- Abstract
In bacteria, trans-translation is the main rescue system, freeing ribosomes stalled on defective messenger RNAs. This mechanism is driven by small protein B (SmpB) and transfer-messenger RNA (tmRNA), a hybrid RNA known to have both a tRNA-like and an mRNA-like domain. Here we present four cryo-EM structures of the ribosome during trans-translation at resolutions from 3.0 to 3.4 Å. These include the high-resolution structure of the whole pre-accommodated state, as well as structures of the accommodated state, the translocated state, and a translocation intermediate. Together, they shed light on the movements of the tmRNA-SmpB complex in the ribosome, from its delivery by the elongation factor EF-Tu to its passage through the ribosomal A and P sites after the opening of the B1 bridges. Additionally, we describe the interactions between the tmRNA-SmpB complex and the ribosome. These explain why the process does not interfere with canonical translation., (© 2021. The Author(s).)
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- 2021
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29. Reflux of Endoplasmic Reticulum proteins to the cytosol inactivates tumor suppressors.
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Sicari D, Centonze FG, Pineau R, Le Reste PJ, Negroni L, Chat S, Mohtar MA, Thomas D, Gillet R, Hupp T, Chevet E, and Igbaria A
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- Animals, Cytosol metabolism, Endoplasmic Reticulum Stress, Mice, Proteins metabolism, Endoplasmic Reticulum metabolism, Endoplasmic Reticulum-Associated Degradation
- Abstract
In the past decades, many studies reported the presence of endoplasmic reticulum (ER)-resident proteins in the cytosol. However, the mechanisms by which these proteins relocate and whether they exert cytosolic functions remain unknown. We find that a subset of ER luminal proteins accumulates in the cytosol of glioblastoma cells isolated from mouse and human tumors. In cultured cells, ER protein reflux to the cytosol occurs upon ER proteostasis perturbation. Using the ER luminal protein anterior gradient 2 (AGR2) as a proof of concept, we tested whether the refluxed proteins gain new functions in the cytosol. We find that refluxed, cytosolic AGR2 binds and inhibits the tumor suppressor p53. These data suggest that ER reflux constitutes an ER surveillance mechanism to relieve the ER from its contents upon stress, providing a selective advantage to tumor cells through gain-of-cytosolic functions-a phenomenon we name ER to Cytosol Signaling (ERCYS)., (© 2021 The Authors. Published under the terms of the CC BY 4.0 license.)
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- 2021
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30. Pseudonajide peptide derived from snake venom alters cell envelope integrity interfering on biofilm formation in Staphylococcus epidermidis.
- Author
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Schneider R, Primon-Barros M, Von Borowski RG, Chat S, Nonin-Lecomte S, Gillet R, and Macedo AJ
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- Amino Acid Motifs, Animals, Anti-Bacterial Agents chemistry, Antimicrobial Cationic Peptides chemistry, Biofilms growth & development, Cell Line, Cell Membrane metabolism, Cell Survival drug effects, Cell Wall metabolism, Gene Expression drug effects, Humans, Permeability drug effects, Teichoic Acids genetics, Teichoic Acids metabolism, Anti-Bacterial Agents pharmacology, Antimicrobial Cationic Peptides pharmacology, Biofilms drug effects, Cell Membrane drug effects, Cell Wall drug effects, Snake Venoms chemistry, Staphylococcus epidermidis drug effects
- Abstract
Background: The increase in bacterial resistance phenotype cases is a global health problem. New strategies must be explored by the scientific community in order to create new treatment alternatives. Animal venoms are a good source for antimicrobial peptides (AMPs), which are excellent candidates for new antimicrobial drug development. Cathelicidin-related antimicrobial peptides (CRAMPs) from snake venoms have been studied as a model for the design of new antimicrobial pharmaceuticals against bacterial infections., Results: In this study we present an 11 amino acid-long peptide, named pseudonajide, which is derived from a Pseudonaja textilis venom peptide and has antimicrobial and antibiofilm activity against Staphylococcus epidermidis. Pseudonajide was selected based on the sequence alignments of various snake venom peptides that displayed activity against bacteria. Antibiofilm activity assays with pseudonajide concentrations ranging from 3.12 to 100 μM showed that the lowest concentration to inhibit biofilm formation was 25 μM. Microscopy analysis demonstrated that pseudonajide interacts with the bacterial cell envelope, disrupting the cell walls and membranes, leading to morphological defects in prokaryotes., Conclusions: Our results suggest that pseudonajide's positives charges interact with negatively charged cell wall components of S. epidermidis, leading to cell damage and inhibiting biofilm formation.
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- 2020
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31. The structure of an elongation factor G-ribosome complex captured in the absence of inhibitors.
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Macé K, Giudice E, Chat S, and Gillet R
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- Bacterial Proteins chemistry, Bacterial Proteins ultrastructure, Cryoelectron Microscopy, Guanosine Triphosphate metabolism, Hydrolysis, Models, Molecular, Molecular Conformation, Peptide Elongation Factor G chemistry, Peptide Elongation Factor G ultrastructure, Protein Binding, Protein Conformation, RNA, Messenger genetics, RNA, Messenger metabolism, RNA, Transfer genetics, RNA, Transfer metabolism, Ribosomes chemistry, Ribosomes ultrastructure, Thermus thermophilus metabolism, Bacterial Proteins metabolism, Peptide Elongation Factor G metabolism, Protein Biosynthesis, Ribosomes metabolism
- Abstract
During translation's elongation cycle, elongation factor G (EF-G) promotes messenger and transfer RNA translocation through the ribosome. Until now, the structures reported for EF-G-ribosome complexes have been obtained by trapping EF-G in the ribosome. These results were based on use of non-hydrolyzable guanosine 5'-triphosphate (GTP) analogs, specific inhibitors or a mutated EF-G form. Here, we present the first cryo-electron microscopy structure of EF-G bound to ribosome in the absence of an inhibitor. The structure reveals a natural conformation of EF-G·GDP in the ribosome, with a previously unseen conformation of its third domain. These data show how EF-G must affect translocation, and suggest the molecular mechanism by which fusidic acid antibiotic prevents the release of EF-G after GTP hydrolysis.
- Published
- 2018
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32. Three glycosylated serine-rich repeat proteins play a pivotal role in adhesion and colonization of the pioneer commensal bacterium, Streptococcus salivarius.
- Author
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Couvigny B, Lapaque N, Rigottier-Gois L, Guillot A, Chat S, Meylheuc T, Kulakauskas S, Rohde M, Mistou MY, Renault P, Doré J, Briandet R, Serror P, and Guédon E
- Subjects
- Animals, Bacterial Adhesion genetics, Epithelial Cells microbiology, Gastrointestinal Tract microbiology, Glucosyltransferases genetics, Glycosylation, Humans, Male, Mice, Models, Animal, Streptococcus salivarius genetics, Streptococcus salivarius metabolism, Adhesins, Bacterial metabolism, Bacterial Adhesion physiology, Bacterial Proteins metabolism, Intestinal Mucosa microbiology, Membrane Glycoproteins metabolism, Streptococcus salivarius pathogenicity
- Abstract
Bacterial adhesion is a critical step for colonization of the host. The pioneer colonizer and commensal bacterium of the human gastrointestinal tract, Streptococcus salivarius, has strong adhesive properties but the molecular determinants of this adhesion remain uncharacterized. Serine-rich repeat (SRR) glycoproteins are a family of adhesins that fulfil an important role in adhesion. In general, Gram-positive bacterial genomes have a unique SRR glycoprotein-encoding gene. We demonstrate that S. salivarius expresses three large and glycosylated surface-exposed proteins - SrpA, SrpB and SrpC - that show characteristics of SRR glycoproteins and are secreted through the accessory SecA2/Y2 system. Two glycosyltransferases - GtfE/F - encoded outside of the secA2/Y2 locus, unusually, perform the first step of the sequential glycosylation process, which is crucial for SRR activity. We show that SrpB and SrpC play complementary adhesive roles involved in several steps of the colonization process: auto-aggregation, biofilm formation and adhesion to a variety of host epithelial cells and components. We also show that at least one of the S. salivarius SRR glycoproteins is important for colonization in mice. SrpA, SrpB and SrpC are the main factors underlying the multifaceted adhesion of S. salivarius and, therefore, play a major role in host colonization., (© 2017 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.)
- Published
- 2017
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33. Purification, identification, and functional analysis of polysomes from the human pathogen Staphylococcus aureus.
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Brielle R, Pinel-Marie ML, Chat S, Gillet R, and Felden B
- Subjects
- Electrophoresis, Agar Gel, Microscopy, Electron, Polyribosomes ultrastructure, Protein Biosynthesis, RNA, Messenger genetics, RNA, Messenger metabolism, Ribosome Subunits, Large, Bacterial ultrastructure, Ribosome Subunits, Small, Bacterial ultrastructure, Staphylococcus aureus metabolism, Cell Fractionation methods, Polyribosomes chemistry, Ribosome Subunits, Large, Bacterial chemistry, Ribosome Subunits, Small, Bacterial chemistry, Staphylococcus aureus genetics
- Abstract
Polysomes are macromolecular complexes made up of multiple ribosomes simultaneously translating a single mRNA into polypeptide chains. Together, the cellular mRNAs translated in this way are referred to 'translatome.' Translation determines a cell's overall gene expression profile. Studying translatome leads to a better understanding of the translational machinery and of its complex regulatory pathways. Given its fundamental role in cell homeostasis and division, bacterial translation is an important target for antibiotics. However, there are no detailed protocols for polysome purification from Staphylococcus aureus, the human pathogen responsible for the majority of multi-drug resistance issues. We therefore developed methods for the isolation of active polysomes, ribosomes, and ribosomal subunits, examining the purity and quality of each fraction and monitoring polysomal activity during protein synthesis. These steps are mandatory for the use of purified S. aureus polysomes and ribosomes for structural studies or for genome-scale analysis of most translated mRNAs., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2017
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34. The endoplasmic reticulum and casein-containing vesicles contribute to milk fat globule membrane.
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Honvo-Houéto E, Henry C, Chat S, Layani S, and Truchet S
- Subjects
- Animals, Breast metabolism, Caseins metabolism, Cell Membrane metabolism, Endoplasmic Reticulum metabolism, Epithelial Cells metabolism, Female, Humans, Lactation metabolism, Lipid Droplets, Lipids, Mammary Glands, Animal metabolism, Mammary Glands, Human metabolism, Membrane Microdomains metabolism, Membranes metabolism, Mice, Milk metabolism, Proteomics methods, SNARE Proteins metabolism, Transport Vesicles metabolism, Transport Vesicles physiology, Glycolipids biosynthesis, Glycolipids metabolism, Glycoproteins biosynthesis, Glycoproteins metabolism
- Abstract
During lactation, mammary epithelial cells secrete huge amounts of milk from their apical side. The current view is that caseins are secreted by exocytosis, whereas milk fat globules are released by budding, enwrapped by the plasma membrane. Owing to the number and large size of milk fat globules, the membrane surface needed for their release might exceed that of the apical plasma membrane. A large-scale proteomics analysis of both cytoplasmic lipid droplets and secreted milk fat globule membranes was used to decipher the cellular origins of the milk fat globule membrane. Surprisingly, differential analysis of protein profiles of these two organelles strongly suggest that, in addition to the plasma membrane, the endoplasmic reticulum and the secretory vesicles contribute to the milk fat globule membrane. Analysis of membrane-associated and raft microdomain proteins reinforces this possibility and also points to a role for lipid rafts in milk product secretion. Our results provide evidence for a significant contribution of the endoplasmic reticulum to the milk fat globule membrane and a role for SNAREs in membrane dynamics during milk secretion. These novel aspects point to a more complex model for milk secretion than currently envisioned., (© 2016 Honvo-Houéto et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).)
- Published
- 2016
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35. Prion protein localizes at the ciliary base during neural and cardiovascular development, and its depletion affects α-tubulin post-translational modifications.
- Author
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Halliez S, Martin-Lannerée S, Passet B, Hernandez-Rapp J, Castille J, Urien C, Chat S, Laude H, Vilotte JL, Mouillet-Richard S, and Béringue V
- Subjects
- Animals, Cardiovascular System metabolism, Cells, Cultured, Central Nervous System metabolism, Embryo, Mammalian metabolism, Embryonic Development, Hedgehog Proteins metabolism, Mice, Microscopy, Confocal, PrPC Proteins deficiency, PrPC Proteins genetics, Prions genetics, Protein Processing, Post-Translational, RNA, Messenger metabolism, Signal Transduction, Stem Cells cytology, Stem Cells metabolism, Cilia metabolism, Prions metabolism, Tubulin metabolism
- Abstract
Although conversion of the cellular form of the prion protein (PrP(C)) into a misfolded isoform is the underlying cause of prion diseases, understanding PrP(C) physiological functions has remained challenging. PrP(C) depletion or overexpression alters the proliferation and differentiation properties of various types of stem and progenitor cells in vitro by unknown mechanisms. Such involvement remains uncertain in vivo in the absence of any drastic phenotype of mice lacking PrP(C). Here, we report PrP(C) enrichment at the base of the primary cilium in stem and progenitor cells from the central nervous system and cardiovascular system of developing mouse embryos. PrP(C) depletion in a neuroepithelial cell line dramatically altered key cilium-dependent processes, such as Sonic hedgehog signalling and α-tubulin post-translational modifications. These processes were also affected over a limited time window in PrP(C)-ablated embryos. Thus, our study reveals PrP(C) as a potential actor in the developmental regulation of microtubule dynamics and ciliary functions.
- Published
- 2015
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36. Hsp90 oligomerization process: How can p23 drive the chaperone machineries?
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Lepvrier E, Nigen M, Moullintraffort L, Chat S, Allegro D, Barbier P, Thomas D, Nazabal A, and Garnier C
- Subjects
- Animals, Brain Chemistry, Carbodiimides chemistry, Chromatography, Gel, Cross-Linking Reagents chemistry, Escherichia coli genetics, Escherichia coli metabolism, Gene Expression, HSP90 Heat-Shock Proteins genetics, HSP90 Heat-Shock Proteins metabolism, Humans, Intramolecular Oxidoreductases genetics, Intramolecular Oxidoreductases metabolism, Models, Molecular, Prostaglandin-E Synthases, Protein Binding, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Swine, Ultracentrifugation, HSP90 Heat-Shock Proteins chemistry, Intramolecular Oxidoreductases chemistry, Protein Multimerization
- Abstract
The 90-kDa heat shock protein (Hsp90) is a highly flexible dimer that is able to self-associate in the presence of divalent cations or under heat shock. In a previous work, we focused on the Mg2+-induced oligomerization process of Hsp90, and characterized the oligomers. Combining analytical ultracentrifugation, size-exclusion chromatography coupled to multi-angle laser light scattering and high-mass matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, we studied the interaction of p23 with both Hsp90 dimer and oligomers. Even if p23 predominantly binds the Hsp90 dimer, we demonstrated, for the first time, that p23 is also able to interact with Hsp90 oligomers, shifting the Hsp90 dimer-oligomers equilibrium toward dimer. Our results showed that the Hsp90:p23 binding stoichiometry decreases with the Hsp90 oligomerization degree. Therefore, we propose a model in which p23 would act as a "protein wedge" regarding the Hsp90 dimer closure and the Hsp90 oligomerization process., (Copyright © 2015. Published by Elsevier B.V.)
- Published
- 2015
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37. Overexpression of Enterococcus faecalis elr operon protects from phagocytosis.
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Cortes-Perez NG, Dumoulin R, Gaubert S, Lacoux C, Bugli F, Martin R, Chat S, Piquand K, Meylheuc T, Langella P, Sanguinetti M, Posteraro B, Rigottier-Gois L, and Serror P
- Subjects
- Animals, Bacterial Adhesion, Bacterial Proteins metabolism, Cell Line, Disease Models, Animal, Enterococcus faecalis genetics, Enterococcus faecalis pathogenicity, Gene Expression Regulation, Bacterial, Gram-Positive Bacterial Infections microbiology, Gram-Positive Bacterial Infections veterinary, Macrophages metabolism, Mice, Virulence, Bacterial Proteins genetics, Enterococcus faecalis physiology, Operon, Peritonitis microbiology, Phagocytosis
- Abstract
Background: Mechanisms underlying the transition from commensalism to virulence in Enterococcus faecalis are not fully understood. We previously identified the enterococcal leucine-rich protein A (ElrA) as a virulence factor of E. faecalis. The elrA gene is part of an operon that comprises four other ORFs encoding putative surface proteins of unknown function., Results: In this work, we compared the susceptibility to phagocytosis of three E. faecalis strains, including a wild-type (WT), a ΔelrA strain, and a strain overexpressing the whole elr operon in order to understand the role of this operon in E. faecalis virulence. While both WT and ΔelrA strains were efficiently phagocytized by RAW 264.7 mouse macrophages, the elr operon-overexpressing strain showed a decreased capability to be internalized by the phagocytic cells. Consistently, the strain overexpressing elr operon was less adherent to macrophages than the WT strain, suggesting that overexpression of the elr operon could confer E. faecalis with additional anti-adhesion properties. In addition, increased virulence of the elr operon-overexpressing strain was shown in a mouse peritonitis model., Conclusions: Altogether, our results indicate that overexpression of the elr operon facilitates the E. faecalis escape from host immune defenses.
- Published
- 2015
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38. Endothelial-to-mesenchymal transition in pulmonary hypertension.
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Ranchoux B, Antigny F, Rucker-Martin C, Hautefort A, Péchoux C, Bogaard HJ, Dorfmüller P, Remy S, Lecerf F, Planté S, Chat S, Fadel E, Houssaini A, Anegon I, Adnot S, Simonneau G, Humbert M, Cohen-Kaminsky S, and Perros F
- Subjects
- Actins biosynthesis, Actins genetics, Animals, Biomarkers, Bone Morphogenetic Protein Receptors, Type II biosynthesis, Bone Morphogenetic Protein Receptors, Type II genetics, Cell Movement, Cells, Cultured, Disease Models, Animal, Gene Expression Profiling, Humans, Hypertension, Pulmonary chemically induced, Hypertension, Pulmonary genetics, Hypoxia complications, Lung blood supply, Lung metabolism, Lung pathology, Monocrotaline toxicity, Mutation, RNA, Messenger biosynthesis, Rats, Sirolimus pharmacology, Vascular Remodeling, Vimentin biosynthesis, Vimentin genetics, Cell Transdifferentiation, Endothelial Cells pathology, Hypertension, Pulmonary pathology, Mesoderm pathology
- Abstract
Background: The vascular remodeling responsible for pulmonary arterial hypertension (PAH) involves predominantly the accumulation of α-smooth muscle actin-expressing mesenchymal-like cells in obstructive pulmonary vascular lesions. Endothelial-to-mesenchymal transition (EndoMT) may be a source of those α-smooth muscle actin-expressing cells., Methods and Results: In situ evidence of EndoMT in human PAH was obtained by using confocal microscopy of multiple fluorescent stainings at the arterial level, and by using transmission electron microscopy and correlative light and electron microscopy at the ultrastructural level. Findings were confirmed by in vitro analyses of human PAH and control cultured pulmonary artery endothelial cells. In addition, the mRNA and protein signature of EndoMT was recognized at the arterial and lung level by quantitative real-time polymerase chain reaction and Western blot analyses. We confirmed our human observations in established animal models of pulmonary hypertension (monocrotaline and SuHx). After establishing the first genetically modified rat model linked to BMPR2 mutations (BMPR2(Δ140Ex1/+) rats), we demonstrated that EndoMT is linked to alterations in signaling of BMPR2, a gene that is mutated in 70% of cases of familial PAH and in 10% to 40% of cases of idiopathic PAH. We identified molecular actors of this pathological transition, including twist overexpression and vimentin phosphorylation. We demonstrated that rapamycin partially reversed the protein expression patterns of EndoMT, improved experimental PAH, and decreased the migration of human pulmonary artery endothelial cells, providing the proof of concept that EndoMT is druggable., Conclusions: EndoMT is linked to alterations in BPMR2 signaling and is involved in the occlusive vas cular remodeling of PAH, findings that may have therapeutic implications., (© 2015 American Heart Association, Inc.)
- Published
- 2015
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39. The membrane-associated form of α(s1)-casein interacts with cholesterol-rich detergent-resistant microdomains.
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Le Parc A, Honvo Houéto E, Pigat N, Chat S, Leonil J, and Chanat E
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- Animals, Biological Transport, Caseins metabolism, Detergents pharmacology, Epithelial Cells metabolism, Epithelial Cells ultrastructure, Evolution, Molecular, Female, Lactation, Membrane Microdomains drug effects, Micelles, Rats, Wistar, Species Specificity, Caseins chemistry, Cholesterol chemistry, Mammals metabolism, Membrane Microdomains chemistry
- Abstract
Caseins, the main milk proteins, interact with colloidal calcium phosphate to form the casein micelle. The mesostructure of this supramolecular assembly markedly influences its nutritional and technological functionalities. However, its detailed molecular organization and the cellular mechanisms involved in its biogenesis have been only partially established. There is a growing body of evidence to support the concept that α(s1)-casein takes center stage in casein micelle building and transport in the secretory pathway of mammary epithelial cells. Here we have investigated the membrane-associated form of α(s1)-casein in rat mammary epithelial cells. Using metabolic labelling we show that α(s1)-casein becomes associated with membranes at the level of the endoplasmic reticulum, with no subsequent increase at the level of the Golgi apparatus. From morphological and biochemical data, it appears that caseins are in a tight relationship with membranes throughout the secretory pathway. On the other hand, we have observed that the membrane-associated form of α(s1)-casein co-purified with detergent-resistant membranes. It was poorly solubilised by Tween 20, partially insoluble in Lubrol WX, and substantially insoluble in Triton X-100. Finally, we found that cholesterol depletion results in the release of the membrane-associated form of α(s1)-casein. These experiments reveal that the insolubility of α(s1)-casein reflects its partial association with a cholesterol-rich detergent-resistant microdomain. We propose that the membrane-associated form of α(s1)-casein interacts with the lipid microdomain, or lipid raft, that forms within the membranes of the endoplasmic reticulum, for efficient forward transport and sorting in the secretory pathway of mammary epithelial cells.
- Published
- 2014
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40. DNA methylation and transcription in a distal region upstream from the bovine AlphaS1 casein gene after once or twice daily milking.
- Author
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Nguyen M, Boutinaud M, Pétridou B, Gabory A, Pannetier M, Chat S, Bouet S, Jouneau L, Jaffrezic F, Laloë D, Klopp C, Brun N, Kress C, Jammes H, Charlier M, and Devinoy E
- Subjects
- Animals, Base Sequence, Cattle, Dairying, Female, Mammary Glands, Animal ultrastructure, Molecular Sequence Data, Multigene Family, Transcription, Genetic, Caseins genetics, DNA Methylation, Lactation, Milk chemistry, Peptide Fragments genetics
- Abstract
Once daily milking (ODM) induces a reduction in milk production when compared to twice daily milking (TDM). Unilateral ODM of one udder half and TDM of the other half, enables the study of underlying mechanisms independently of inter-individual variability (same genetic background) and of environmental factors. Our results show that in first-calf heifers three CpG, located 10 kb upstream from the CSN1S1 gene were methylated to 33, 34 and 28%, respectively, after TDM but these levels were higher after ODM, 38, 38 and 33%, respectively. These methylation levels were much lower than those observed in the mammary gland during pregnancy (57, 59 and 50%, respectively) or in the liver (74, 78 and 61%, respectively). The methylation level of a fourth CpG (CpG4), located close by (29% during TDM) was not altered after ODM. CpG4 methylation reached 39.7% and 59.5%, during pregnancy or in the liver, respectively. CpG4 is located within a weak STAT5 binding element, arranged in tandem with a second high affinity STAT5 element. STAT5 binding is only marginally modulated by CpG4 methylation, but it may be altered by the methylation levels of the three other CpG nearby. Our results therefore shed light on mechanisms that help to explain how milk production is almost, but not fully, restored when TDM is resumed (15.1 ± 0.2 kg/day instead of 16.2 ± 0.2 kg/day, p<0.01). The STAT5 elements are 100 bp away from a region transcribed in the antisense orientation, in the mammary gland during lactation, but not during pregnancy or in other reproductive organs (ovary or testes). We now need to clarify whether the transcription of this novel RNA is a consequence of STAT5 interacting with the CSN1S1 distal region, or whether it plays a role in the chromatin structure of this region.
- Published
- 2014
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41. Magnetic hyperthermia efficiency in the cellular environment for different nanoparticle designs.
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Di Corato R, Espinosa A, Lartigue L, Tharaud M, Chat S, Pellegrino T, Ménager C, Gazeau F, and Wilhelm C
- Subjects
- Anisotropy, Cell Line, Tumor, Cell Survival, Hot Temperature, Humans, Nanoparticles ultrastructure, Solutions, Spectrophotometry, Atomic, Cellular Microenvironment, Hyperthermia, Induced, Magnetic Phenomena, Nanoparticles chemistry, Nanotechnology
- Abstract
Magnetic hyperthermia mediated by magnetic nanomaterials is one promising antitumoral nanotherapy, particularly for its ability to remotely destroy deep tumors. More and more new nanomaterials are being developed for this purpose, with improved heat-generating properties in solution. However, although the ultimate target of these treatments is the tumor cell, the heating efficiency, and the underlying mechanisms, are rarely studied in the cellular environment. Here we attempt to fill this gap by making systematic measurements of both hyperthermia and magnetism in controlled cell environments, using a wide range of nanomaterials. In particular, we report a systematic fall in the heating efficiency for nanomaterials associated with tumour cells. Real-time measurements showed that this loss of heat-generating power occurred very rapidly, within a matter of minutes. The fall in heating correlated with the magnetic characterization of the samples, demonstrating a complete inhibition of the Brownian relaxation in cellular conditions., (Copyright © 2014 Elsevier Ltd. All rights reserved.)
- Published
- 2014
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42. Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD).
- Author
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Desjardin C, Chat S, Gilles M, Legendre R, Riviere J, Mata X, Balliau T, Esquerré D, Cribiu EP, Betch JM, and Schibler L
- Subjects
- Animals, Cartilage physiopathology, Cartilage ultrastructure, Chondrocytes pathology, Chondrocytes ultrastructure, Horses, Joints physiopathology, Joints ultrastructure, Microscopy, Electron, Transmission, Mitochondria ultrastructure, Osteochondritis Dissecans genetics, Osteogenesis, Proteomics, Quantitative Trait Loci, Tibia physiopathology, Tibia ultrastructure, Endoplasmic Reticulum Stress, Mitochondria pathology, Osteochondritis Dissecans physiopathology, Osteochondritis Dissecans veterinary
- Abstract
Osteochondrosis (OC) is a developmental bone disorder affecting several mammalian species including the horse. Equine OC is described as a focal disruption of endochondral ossification, leading to osteochondral lesions (osteochondritis dissecans, OCD) that may release free bodies within the joint. OCD lesions trigger joint swelling, stiffness and lameness and affects about 30% of the equine population. OCD is considered as multifactorial but its physiopathology is still poorly understood and genes involved in genetic predisposition are still unknown. Our study compared two healthy and two OC-affected 18-month-old French Trotters diagnosed with OCD lesions at the intermediate ridge of the distal tibia. A comparative shot-gun proteomic analysis of non-wounded cartilage and sub-chondral bone from healthy (healthy samples) and OC-affected foals (predisposed samples) identified 83 and 53 modulated proteins, respectively. These proteins are involved in various biological pathways including matrix structure and maintenance, protein biosynthesis, folding and transport, mitochondrial activity, energy and calcium metabolism. Transmission electron microscopy revealed typical features of mitochondrial swelling and ER-stress, such as large, empty mitochondria, and hyper-dilated rough endoplasmic reticulum, in the deep zone of both OC lesions and predisposed cartilage. Abnormal fibril organization surrounding chondrocytes and abnormal features at the ossification front were also observed. Combining these findings with quantitative trait loci and whole genome sequencing results identified about 140 functional candidate genes carrying putative damaging mutations in 30 QTL regions. In summary, our study suggests that OCD lesions may result from defective hypertrophic terminal differentiation associated with mitochondrial dysfunction and ER-stress, leading to impaired cartilage and bone biomechanical properties, making them prone to fractures. In addition, 11 modulated proteins and several candidate mutations located in QTL regions were identified, bringing new insight into the molecular physiopathology and genetic basis of OCD., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2014
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43. A recombinant novirhabdovirus presenting at the surface the E Glycoprotein from West Nile Virus (WNV) is immunogenic and provides partial protection against lethal WNV challenge in BALB/c mice.
- Author
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Nzonza A, Lecollinet S, Chat S, Lowenski S, Mérour E, Biacchesi S, and Brémont M
- Subjects
- Animals, Antibodies, Neutralizing biosynthesis, Antibodies, Neutralizing immunology, Antibodies, Viral biosynthesis, Antibodies, Viral immunology, Cell Line, Female, Genetic Vectors genetics, Immunization, Mice, Mice, Inbred BALB C, Protein Structure, Tertiary, Th2 Cells immunology, Viral Envelope Proteins chemistry, Viral Envelope Proteins genetics, West Nile virus immunology, Antigen Presentation, DNA, Recombinant genetics, Novirhabdovirus genetics, Novirhabdovirus immunology, Viral Envelope Proteins immunology, West Nile virus physiology
- Abstract
West Nile Virus (WNV) is a zoonotic mosquito-transmitted flavivirus that can infect and cause disease in mammals including humans. Our study aimed at developing a WNV vectored vaccine based on a fish Novirhabdovirus, the Viral Hemorrhagic Septicemia virus (VHSV). VHSV replicates at temperatures lower than 20°C and is naturally inactivated at higher temperatures. A reverse genetics system has recently been developed in our laboratory for VHSV allowing the addition of genes in the viral genome and the recovery of the respective recombinant viruses (rVHSV). In this study, we have generated rVHSV vectors bearing the complete WNV envelope gene (EWNV) (rVHSV-EWNV) or fragments encoding E subdomains (either domain III alone or domain III fused to domain II) (rVHSV-DIIIWNV and rVHSV-DII-DIIIWNV, respectively) in the VHSV genome between the N and P cistrons. With the objective to enhance the targeting of the EWNV protein or EWNV-derived domains to the surface of VHSV virions, Novirhadovirus G-derived signal peptide and transmembrane domain (SPG and TMG) were fused to EWNV at its amino and carboxy termini, respectively. By Western-blot analysis, electron microscopy observations or inoculation experiments in mice, we demonstrated that both the EWNV and the DIIIWNV could be expressed at the viral surface of rVHSV upon addition of SPG. Every constructs expressing EWNV fused to SPG protected 40 to 50% of BALB/cJ mice against WNV lethal challenge and specifically rVHSV-SPGEWNV induced a neutralizing antibody response that correlated with protection. Surprisingly, rVHSV expressing EWNV-derived domain III or II and III were unable to protect mice against WNV challenge, although these domains were highly incorporated in the virion and expressed at the viral surface. In this study we demonstrated that a heterologous glycoprotein and non membrane-anchored protein, can be efficiently expressed at the surface of rVHSV making this approach attractive to develop new vaccines against various pathogens.
- Published
- 2014
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44. Milk secretion: The role of SNARE proteins.
- Author
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Truchet S, Chat S, and Ollivier-Bousquet M
- Subjects
- Animals, Female, Humans, Mammary Glands, Animal metabolism, Mammary Glands, Human metabolism, Lactation metabolism, Mammary Glands, Animal physiology, Mammary Glands, Human physiology, Milk metabolism, SNARE Proteins metabolism
- Abstract
During lactation, polarized mammary epithelial secretory cells (MESCs) secrete huge quantities of the nutrient molecules that make up milk, i.e. proteins, fat globules and soluble components such as lactose and minerals. Some of these nutrients are only produced by the MESCs themselves, while others are to a great extent transferred from the blood. MESCs can thus be seen as a crossroads for both the uptake and the secretion with cross-talks between intracellular compartments that enable spatial and temporal coordination of the secretion of the milk constituents. Although the physiology of lactation is well understood, the molecular mechanisms underlying the secretion of milk components remain incompletely characterized. Major milk proteins, namely caseins, are secreted by exocytosis, while the milk fat globules are released by budding, being enwrapped by the apical plasma membrane. Prolactin, which stimulates the transcription of casein genes, also induces the production of arachidonic acid, leading to accelerated casein transport and/or secretion. Because of their ability to form complexes that bridge two membranes and promote their fusion, SNARE (Soluble N-ethylmaleimide-Sensitive Factor Attachment Protein Receptor) proteins are involved in almost all intracellular trafficking steps and exocytosis. As SNAREs can bind arachidonic acid, they could be the effectors of the secretagogue effect of prolactin in MESCs. Indeed, some SNAREs have been observed between secretory vesicles and lipid droplets suggesting that these proteins could not only orchestrate the intracellular trafficking of milk components but also act as key regulators for both the coupling and coordination of milk product secretion in response to hormones.
- Published
- 2014
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45. Cell-derived vesicles as a bioplatform for the encapsulation of theranostic nanomaterials.
- Author
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Silva AK, Di Corato R, Pellegrino T, Chat S, Pugliese G, Luciani N, Gazeau F, and Wilhelm C
- Subjects
- Biocompatible Materials chemistry, Biocompatible Materials metabolism, Contrast Media chemistry, Contrast Media metabolism, Ferric Compounds chemistry, Fluorescent Dyes chemistry, Gold chemistry, Human Umbilical Vein Endothelial Cells, Humans, Magnetic Resonance Imaging, Magnetics, Metal Nanoparticles chemistry, Microscopy, Electron, Transmission, Particle Size, Temperature, Unilamellar Liposomes metabolism, Nanostructures chemistry, Unilamellar Liposomes chemistry
- Abstract
There is a great deal of interest in the development of nanoplatforms gathering versatility and multifunctionality. The strategy reported herein meets these requirements and further integrates a cell-friendly shell in a bio-inspired approach. By taking advantage of a cell mechanism of biomolecule transport using vesicles, we engineered a hybrid biogenic nanoplatform able to encapsulate a set of nanoparticles regardless of their chemistry or shape. As a proof of versatility, different types of hybrid nanovesicles were produced: magnetic, magnetic-metallic and magnetic-fluorescent vesicles, either a single component or multiple components, combining the advantageous properties of each integrant nanoparticle. These nanoparticle-loaded vesicles can be manipulated, monitored by MRI and/or fluorescence imaging methods, while acting as efficient nano-heaters. The resulting assets for targeting, imaging and therapy converge for the outline of a new generation of nanosystems merging versatility and multifunctionality into a bio-camouflaged and bio-inspired approach.
- Published
- 2013
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46. Surface proteome analysis of a natural isolate of Lactococcus lactis reveals the presence of pili able to bind human intestinal epithelial cells.
- Author
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Meyrand M, Guillot A, Goin M, Furlan S, Armalyte J, Kulakauskas S, Cortes-Perez NG, Thomas G, Chat S, Péchoux C, Dupres V, Hols P, Dufrêne YF, Trugnan G, and Chapot-Chartier MP
- Subjects
- Adhesins, Bacterial genetics, Adhesins, Bacterial metabolism, Amino Acid Sequence, Aminoacyltransferases genetics, Aminoacyltransferases metabolism, Bacterial Adhesion, Bacterial Proteins metabolism, Caco-2 Cells, Chromatography, Liquid, Cysteine Endopeptidases genetics, Cysteine Endopeptidases metabolism, Fimbriae Proteins metabolism, Fimbriae, Bacterial metabolism, Fimbriae, Bacterial ultrastructure, Humans, Intestines cytology, Intestines microbiology, Lactococcus lactis metabolism, Lactococcus lactis ultrastructure, Microscopy, Electron, Molecular Sequence Annotation, Molecular Sequence Data, Multigene Family, Peptide Fragments analysis, Plasmids, Probiotics chemistry, Proteolysis, Proteome metabolism, Tandem Mass Spectrometry, Trypsin chemistry, Bacterial Proteins genetics, Fimbriae Proteins genetics, Fimbriae, Bacterial genetics, Gene Expression Regulation, Bacterial, Lactococcus lactis genetics, Proteome genetics
- Abstract
Surface proteins of Gram-positive bacteria play crucial roles in bacterial adhesion to host tissues. Regarding commensal or probiotic bacteria, adhesion to intestinal mucosa may promote their persistence in the gastro-intestinal tract and their beneficial effects to the host. In this study, seven Lactococcus lactis strains exhibiting variable surface physico-chemical properties were compared for their adhesion to Caco-2 intestinal epithelial cells. In this test, only one vegetal isolate TIL448 expressed a high-adhesion phenotype. A nonadhesive derivative was obtained by plasmid curing from TIL448, indicating that the adhesion determinants were plasmid-encoded. Surface-exposed proteins in TIL448 were analyzed by a proteomic approach consisting in shaving of the bacterial surface with trypsin and analysis of the released peptides by LC-MS/MS. As the TIL448 complete genome sequence was not available, the tryptic peptides were identified by a mass matching approach against a database including all Lactococcus protein sequences and the sequences deduced from partial DNA sequences of the TIL448 plasmids. Two surface proteins, encoded by plasmids in TIL448, were identified as candidate adhesins, the first one displaying pilin characteristics and the second one containing two mucus-binding domains. Inactivation of the pilin gene abolished adhesion to Caco-2 cells whereas inactivation of the mucus-binding protein gene had no effect on adhesion. The pilin gene is located inside a cluster of four genes encoding two other pilin-like proteins and one class-C sortase. Synthesis of pili was confirmed by immunoblotting detection of high molecular weight forms of pilins associated to the cell wall as well as by electron and atomic force microscopy observations. As a conclusion, surface proteome analysis allowed us to detect pilins at the surface of L. lactis TIL448. Moreover we showed that pili appendages are formed and involved in adhesion to Caco-2 intestinal epithelial cells.
- Published
- 2013
- Full Text
- View/download PDF
47. Antigen recovery and preservation using the microwave irradiation of biological samples for transmission electron microscopy analysis.
- Author
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Aïoun J, Chat S, Bordat C, and Péchoux C
- Subjects
- Animals, Automation, Laboratory methods, Brain ultrastructure, Brain Chemistry, Caveolin 1 analysis, Cricetinae, Mammary Glands, Animal chemistry, Mammary Glands, Animal ultrastructure, Mice, PPAR delta analysis, PPAR gamma analysis, PPAR-beta analysis, Antigens analysis, Microscopy, Electron, Transmission methods, Microwaves, Preservation, Biological methods, Specimen Handling methods
- Abstract
Most studies using microwave irradiation (MWI) for the preparation of tissue samples have reported an improvement in structural integrity. However, there have been few studies on the effect of microwave (MW) on antigen preservation during sample preparation prior to immunolocalization. This report documents our experience of specimen preparation using an automatic microwave apparatus to obtain antigen preservation and retrieval. We tested the effects of MW processing vs. conventional procedures on the morphology and antigenicity of two different tissues: the brain and mammary gland, whose chemical composition and anatomical organization are quite different. We chose to locate the transcription factor PPARβ/δ using immunocytochemistry on brain tissue sections from hamsters. Antigen retrieval protocols involving MWI were used to restore immunoreactivity. We also studied the efficiency of the ultrastructural immunolocalization of both PPARγ and caveolin-1 following MWI vs. conventional treatment, on mammary gland tissue from mice at 10 days of lactation. Our findings showed that the treatment of tissue samples with MWI, in the context of a process lasting just a few hours from fixation to immunolocalization, enabled similar, or even better, results than conventional protocols. The quantification of immunolabeling for cav-1 indicated an increase in density of up to three-fold in tissues processed in the microwave oven. Furthermore, MW treatment permitted the localization of PPARβ/δ in glutaraldehyde-fixed specimens, which was impossible in the absence of MWI. This study thus showed that techniques involving the use of microwaves could largely improve both ultrastructure and immunodetection., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
48. Long term in vivo biotransformation of iron oxide nanoparticles.
- Author
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Levy M, Luciani N, Alloyeau D, Elgrabli D, Deveaux V, Pechoux C, Chat S, Wang G, Vats N, Gendron F, Factor C, Lotersztajn S, Luciani A, Wilhelm C, and Gazeau F
- Subjects
- Animals, Electron Spin Resonance Spectroscopy, Male, Mice, Microscopy, Electron, Transmission, Nanoparticles ultrastructure, Ferric Compounds chemistry, Ferric Compounds metabolism, Nanoparticles chemistry
- Abstract
The long term outcome of nanoparticles in the organism is one of the most important concerns raised by the development of nanotechnology and nanomedicine. Little is known on the way taken by cells to process and degrade nanoparticles over time. In this context, iron oxide superparamagnetic nanoparticles benefit from a privileged status, because they show a very good tolerance profile, allowing their clinical use for MRI diagnosis. It is generally assumed that the specialized metabolism which regulates iron in the organism can also handle iron oxide nanoparticles. However the biotransformation of iron oxide nanoparticles is still not elucidated. Here we propose a multiscale approach to study the fate of nanomagnets in the organism. Ferromagnetic resonance and SQUID magnetization measurements are used to quantify iron oxide nanoparticles and follow the evolution of their magnetic properties. A nanoscale structural analysis by electron microscopy complements the magnetic follow-up of nanoparticles injected to mice. We evidence the biotransformation of superparamagnetic maghemite nanoparticles into poorly-magnetic iron species probably stored into ferritin proteins over a period of three months. A putative mechanism is proposed for the biotransformation of iron-oxide nanoparticles., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
49. Characterisation of the potential SNARE proteins relevant to milk product release by mouse mammary epithelial cells.
- Author
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Chat S, Layani S, Mahaut C, Henry C, Chanat E, and Truchet S
- Subjects
- Animals, Caseins metabolism, Cells, Cultured, Epithelial Cells ultrastructure, Female, Lactation physiology, Mammary Glands, Animal metabolism, Mice, Micelles, Milk chemistry, SNARE Proteins genetics, Epithelial Cells metabolism, Mammary Glands, Animal cytology, Milk metabolism, SNARE Proteins metabolism
- Abstract
Casein micelles and fat globules are essential components of milk and are both secreted at the apical side of mammary epithelial cells during lactation. Milk fat globules are excreted by budding, being enwrapped by the apical plasma membrane, while caseins contained in transport vesicles are released by exocytosis. Nevertheless, the molecular mechanisms governing casein exocytosis are, to date, not fully deciphered. SNARE proteins are known to take part in cellular membrane trafficking and in exocytosis events in many cell types and we therefore attempted to identify those relevant to casein secretion. With this aim, we performed a detailed analysis of their expression by RT-PCR in both whole mouse mammary gland and in purified mammary acini at various physiological stages, as well as in the HC11 cell line. The expression of some regulatory proteins involved in SNARE complex formation such as Munc-13, Munc-18 and complexins was also explored. The amount of certain SNAREs appeared to be regulated depending on the physiological stage of the mammary gland. Co-immunoprecipitation experiments indicated that SNAP-23 interacted with syntaxin-6, -7 and -12, as well as with VAMP-3, -4 and -8 in mammary epithelial cells during lactation. Finally, the subcellular localisation of candidate SNAREs in these cells was determined both by indirect immunofluorescence and immunogold labelling. The present work provides important new data concerning SNARE proteins in mammary epithelial cells and points to SNAP-23 as a potential central player for the coupling of casein and milk fat globule secretion during lactation., (Copyright © 2011 Elsevier GmbH. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
50. Oleate and linoleate stimulate degradation of β-casein in prolactin-treated HC11 mouse mammary epithelial cells.
- Author
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Pauloin A, Chat S, Péchoux C, Hue-Beauvais C, Droineau S, Galio L, Devinoy E, and Chanat E
- Subjects
- Animals, Autophagy drug effects, Autophagy physiology, Caseins drug effects, Cell Line, Enzyme Inhibitors pharmacology, Epithelial Cells cytology, Epithelial Cells drug effects, Fatty Acids, Unsaturated metabolism, Fatty Acids, Unsaturated pharmacology, Female, Linoleic Acid pharmacology, Lipid Metabolism drug effects, Lipid Metabolism physiology, Lipids physiology, Lysosomes drug effects, Lysosomes metabolism, Mammary Glands, Animal cytology, Mammary Glands, Animal drug effects, Mice, Oleic Acid pharmacology, Prolactin pharmacology, Proteasome Endopeptidase Complex metabolism, Proteasome Inhibitors, Protein Processing, Post-Translational drug effects, Protein Processing, Post-Translational physiology, Caseins metabolism, Epithelial Cells metabolism, Linoleic Acid metabolism, Mammary Glands, Animal metabolism, Oleic Acid metabolism, Prolactin metabolism
- Abstract
Although virtually all cells store neutral lipids as cytoplasmic lipid droplets, mammary epithelial cells have developed a specialized function to secrete them as milk fat globules. We have used the mammary epithelial cell line HC11 to evaluate the potential connections between the lipid and protein synthetic pathways. We show that unsaturated fatty acids induce a pronounced proliferation of cytoplasmic lipid droplets and stimulate the synthesis of adipose differentiation-related protein. Unexpectedly, the cellular level of beta-casein, accumulated under lactogenic hormone treatment, decreases following treatment of the cells with unsaturated fatty acids. In contrast, saturated fatty acids have no significant effect on either cytoplasmic lipid droplet proliferation or cellular beta-casein levels. We demonstrate that the action of unsaturated fatty acids on the level of beta-casein is post-translational and requires protein synthesis. We have also observed that proteasome inhibitors potentiate beta-casein degradation, indicating that proteasomal activity can destroy some cytosolic protein(s) involved in the process that negatively controls beta-casein levels. Finally, lysosome inhibitors block the effect of unsaturated fatty acids on the cellular level of beta-casein. Our data thus suggest that the degradation of beta-casein occurs via the microautophagic pathway.
- Published
- 2010
- Full Text
- View/download PDF
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