22 results on '"Chase D McCann"'
Search Results
2. Validation of publicly-available software used in analyzing NGS data for HIV-1 drug resistance mutations and transmission networks in a Washington, DC, Cohort.
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Kamwing Jair, Chase D McCann, Harrison Reed, Amanda D Castel, Marcos Pérez-Losada, Brittany Wilbourn, Alan E Greenberg, Jeanne A Jordan, and DC Cohort Executive Committee
- Subjects
Medicine ,Science - Abstract
The DC Cohort is an ongoing longitudinal observational study of persons living with HIV. To better understand HIV-1 drug resistance and potential transmission clusters among these participants, we performed targeted, paired-end next-generation sequencing (NGS) of protease, reverse transcriptase and integrase amplicons. We elected to use free, publicly-available software (HyDRA Web, Stanford HIVdb and HIV-TRACE) for data analyses so that laboratory personnel without extensive bioinformatics expertise could use it; making the approach accessible and affordable for labs worldwide. With more laboratories transitioning away from Sanger-based chemistries to NGS platforms, lower frequency drug resistance mutations (DRMs) can be detected, yet their clinical relevance is uncertain. We looked at the impact choice in cutoff percentage had on number of DRMs detected and found an inverse correlation between the two. Longitudinal studies will be needed to determine whether low frequency DRMs are an early indicator of emerging resistance. We successfully validated this pipeline against a commercial pipeline, and another free, publicly-available pipeline. RT DRM results from HyDRA Web were compared to both SmartGene and PASeq Web; using the Mantel test, R2 values were 0.9332 (p
- Published
- 2019
- Full Text
- View/download PDF
3. Antiviral cellular therapy for enhancing T-cell reconstitution before or after hematopoietic stem cell transplantation (ACES): a two-arm, open label phase II interventional trial of pediatric patients with risk factor assessment
- Author
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Michael D. Keller, Patrick J. Hanley, Yueh-Yun Chi, Paibel Aguayo-Hiraldo, Christopher C. Dvorak, Michael R. Verneris, Donald B. Kohn, Sung-Yun Pai, Blachy J. Dávila Saldaña, Benjamin Hanisch, Troy C. Quigg, Roberta H. Adams, Ann Dahlberg, Shanmuganathan Chandrakasan, Hasibul Hasan, Jemily Malvar, Mariah A. Jensen-Wachspress, Christopher A. Lazarski, Gelina Sani, John M. Idso, Haili Lang, Pamela Chansky, Chase D. McCann, Jay Tanna, Allistair A. Abraham, Jennifer L. Webb, Abeer Shibli, Amy K. Keating, Prakash Satwani, Pawel Muranski, Erin Hall, Michael J. Eckrich, Evan Shereck, Holly Miller, Ewelina Mamcarz, Rajni Agarwal, Satiro N. De Oliveira, Mark T. Vander Lugt, Christen L. Ebens, Victor M. Aquino, Jeffrey J. Bednarski, Julia Chu, Suhag Parikh, Jennifer Whangbo, Michail Lionakis, Elias T. Zambidis, Elizabeth Gourdine, Catherine M. Bollard, and Michael A. Pulsipher
- Subjects
Science - Abstract
Abstract Viral infections remain a major risk in immunocompromised pediatric patients, and virus-specific T cell (VST) therapy has been successful for treatment of refractory viral infections in prior studies. We performed a phase II multicenter study (NCT03475212) for the treatment of pediatric patients with inborn errors of immunity and/or post allogeneic hematopoietic stem cell transplant with refractory viral infections using partially-HLA matched VSTs targeting cytomegalovirus, Epstein-Barr virus, or adenovirus. Primary endpoints were feasibility, safety, and clinical responses (>1 log reduction in viremia at 28 days). Secondary endpoints were reconstitution of antiviral immunity and persistence of the infused VSTs. Suitable VST products were identified for 75 of 77 clinical queries. Clinical responses were achieved in 29 of 47 (62%) of patients post-HSCT including 73% of patients evaluable at 1-month post-infusion, meeting the primary efficacy endpoint (>52%). Secondary graft rejection occurred in one child following VST infusion as described in a companion article. Corticosteroids, graft-versus-host disease, transplant-associated thrombotic microangiopathy, and eculizumab treatment correlated with poor response, while uptrending absolute lymphocyte and CD8 T cell counts correlated with good response. This study highlights key clinical factors that impact response to VSTs and demonstrates the feasibility and efficacy of this therapy in pediatric HSCT.
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- 2024
- Full Text
- View/download PDF
4. Outcomes following posttransplant viral-specific T-cell therapy in patients with sickle cell disease
- Author
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Hannah Kinoshita, Mamatha Mandava, Mariah Jensen-Wachspress, Haili Lang, Elisabeth Joy, Jay Tanna, Chase D. McCann, Samuel O’Brien, Sianna Burnett, Abeer Shibli, Fahmida Hoq, Monica Bhatia, Patrick J. Hanley, Blachy Dávila Saldaña, Kris M. Mahadeo, Catherine M. Bollard, Michael D. Keller, and Allistair Abraham
- Subjects
Hematology - Abstract
Hematopoietic stem cell transplantation (HSCT) is being increasingly used as a curative approach for sickle cell disease (SCD). With the risk of graft-versus-host disease (GVHD), especially in the human leukocyte antigen−mismatched donors, intense immunosuppression is required leading to an increased risk of viral infection. Post-HSCT, adoptive transfer of virus-specific T-cell (VST) therapies have not been well-studied in patients with SCD. Here, we report the outcomes of patients with SCD at a single-center who received VSTs after transplant to prevent or treat viral infections. Thirteen patients who received HSCT from human leukocyte antigen-matched (n = 9) or -mismatched (n = 4) donors for SCD were treated with a total of 15 VST products for the treatment or prophylaxis of multiple viruses (cytomegalovirus, Epstein-Barr virus, adenovirus, BK virus, human herpes virus 6 +/− human parainfluenza virus 3). Of the patients evaluated, 46.2% (n = 6)) received VSTs as treatment for viral infection. Eighty percent of patients with active viremia (n = 4/5) achieved remission of at least 1 target virus. Seven additional patients (53.8%) received VSTs prophylactically and 6 of 7 (85.7%) remained virus-free after infusion. No immediate infusion-related toxicities occurred, and severe de novo acute GVHD occurred in only 2 (15.4%) patients. Given the good safety profile, high-rate of clinical responses and sustained remissions when administered with standard antiviral treatments, the routine use of VSTs after HSCT as prophylaxis or treatment may improve the overall safety of transplant for patients with SCD.
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- 2022
5. BCL-2 antagonism sensitizes cytotoxic T cell–resistant HIV reservoirs to elimination ex vivo
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Catherine M. Bollard, Yanqin Ren, Amanda B. Macedo, Avery Wimpelberg, Thomas Rohwetter, Szu-Han Huang, Dean Magat, Ryan Durga, W. David Hardy, Elizabeth Zale, Shabnum Patel, Alberto Bosque, R. Brad Jones, Dughan J. Ahimovic, Erika Benko, Colin Kovacs, Talia M. Mota, Chase D. McCann, Winiffer D. Conce Alberto, Dora Chan, Christopher Cannon, and Ronald Truong
- Subjects
Adult ,CD4-Positive T-Lymphocytes ,Cytotoxicity, Immunologic ,Male ,0301 basic medicine ,medicine.medical_treatment ,HIV Infections ,In Vitro Techniques ,Biology ,Complement factor B ,03 medical and health sciences ,0302 clinical medicine ,Antiretroviral Therapy, Highly Active ,medicine ,Humans ,Cytotoxic T cell ,Disease Reservoirs ,Sulfonamides ,Gene Expression Profiling ,Antagonist ,HIV ,General Medicine ,Immunotherapy ,Middle Aged ,Bridged Bicyclo Compounds, Heterocyclic ,Acquired immune system ,Combined Modality Therapy ,Coculture Techniques ,Virus Latency ,CTL ,030104 developmental biology ,Proto-Oncogene Proteins c-bcl-2 ,030220 oncology & carcinogenesis ,Cancer research ,Female ,Antagonism ,Ex vivo ,Research Article ,T-Lymphocytes, Cytotoxic - Abstract
Curing HIV infection will require the elimination of a reservoir of infected CD4(+) T cells that persists despite HIV-specific cytotoxic T cell (CTL) responses. Although viral latency is a critical factor in this persistence, recent evidence also suggests a role for intrinsic resistance of reservoir-harboring cells to CTL killing. This resistance may have contributed to negative outcomes of clinical trials, where pharmacologic latency reversal has thus far failed to drive reductions in HIV reservoirs. Through transcriptional profiling, we herein identified overexpression of the prosurvival factor B cell lymphoma 2 (BCL-2) as a distinguishing feature of CD4(+) T cells that survived CTL killing. We show that the inducible HIV reservoir was disproportionately present in BCL-2(hi) subsets in ex vivo CD4(+) T cells. Treatment with the BCL-2 antagonist ABT-199 was not sufficient to drive reductions in ex vivo viral reservoirs when tested either alone or with a latency-reversing agent (LRA). However, the triple combination of strong LRAs, HIV-specific T cells, and a BCL-2 antagonist uniquely enabled the depletion of ex vivo viral reservoirs. Our results provide rationale for novel therapeutic approaches targeting HIV cure and, more generally, suggest consideration of BCL-2 antagonism as a means of enhancing CTL immunotherapy in other settings, such as cancer.
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- 2020
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6. A participant-derived xenograft model of HIV enables long-term evaluation of autologous immunotherapies
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Catherine M. Bollard, Ali Danesh, Chanson J. Brumme, Thomas Lars Andresen, Douglas S. Jones, Bruce D. Walker, Zabrina L. Brumme, Eva M. Stevenson, Thomas R Dilling, Shabnum Patel, Winnie Dong, Christiaan H. van Dorp, Adam R. Ward, Elizabeth Zale, Alan S. Perelson, R. Brad Jones, Darrell J. Irvine, Talia M. Mota, and Chase D. McCann
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CD4-Positive T-Lymphocytes ,0301 basic medicine ,T cell ,medicine.medical_treatment ,Immunology ,Cell ,HIV Infections ,Viremia ,Disease ,CD8-Positive T-Lymphocytes ,Virus Replication ,Technical Advances and Resources ,Cell Line ,Infectious Disease and Host Defense ,Mice ,03 medical and health sciences ,0302 clinical medicine ,In vivo ,medicine ,Immunodeficiency ,Animals ,Humans ,Immunology and Allergy ,Cytotoxic T cell ,030304 developmental biology ,Interleukin-15 ,0303 health sciences ,business.industry ,HEK 293 cells ,Immunotherapy ,medicine.disease ,3. Good health ,HEK293 Cells ,030104 developmental biology ,medicine.anatomical_structure ,Viral replication ,Cell culture ,030220 oncology & carcinogenesis ,Mutation ,HIV-1 ,Cancer research ,Heterografts ,business ,CD8 - Abstract
McCann et al. describe the development and characterization of a new mouse model for studying HIV-specific T cell responses and testing various immunotherapeutic strategies, which they validate by demonstrating enhanced therapeutic effects of autologous HIV-specific T cells augmented with cytokine-loaded nanogels., HIV-specific CD8+ T cells partially control viral replication and delay disease progression, but they rarely provide lasting protection, largely due to immune escape. Here, we show that engrafting mice with memory CD4+ T cells from HIV+ donors uniquely allows for the in vivo evaluation of autologous T cell responses while avoiding graft-versus-host disease and the need for human fetal tissues that limit other models. Treating HIV-infected mice with clinically relevant HIV-specific T cell products resulted in substantial reductions in viremia. In vivo activity was significantly enhanced when T cells were engineered with surface-conjugated nanogels carrying an IL-15 superagonist, but it was ultimately limited by the pervasive selection of a diverse array of escape mutations, recapitulating patterns seen in humans. By applying mathematical modeling, we show that the kinetics of the CD8+ T cell response have a profound impact on the emergence and persistence of escape mutations. This “participant-derived xenograft” model of HIV provides a powerful tool for studying HIV-specific immunological responses and facilitating the development of effective cell-based therapies.
- Published
- 2021
7. Deep Sequencing Reveals Compartmentalized HIV-1 in the Semen of Men with and without Sexually Transmitted Infection-Associated Urethritis
- Author
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Olivia D. Council, Shuntai Zhou, Chase D. McCann, Irving Hoffman, Gerald Tegha, Deborah Kamwendo, Mitch Matoga, Sergei L. Kosakovsky Pond, Myron S. Cohen, and Ronald Swanstrom
- Subjects
Adult ,CD4-Positive T-Lymphocytes ,Male ,Malawi ,Immunology ,Population ,Sexually Transmitted Diseases ,HIV Infections ,Semen ,Biology ,Virus Replication ,urologic and male genital diseases ,Microbiology ,Virus ,Cohort Studies ,03 medical and health sciences ,Virology ,Genotype ,medicine ,Humans ,Urethritis ,education ,Phylogeny ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,Base Sequence ,030306 microbiology ,Transmission (medicine) ,env Gene Products, Human Immunodeficiency Virus ,High-Throughput Nucleotide Sequencing ,virus diseases ,Middle Aged ,medicine.disease ,CD4 Lymphocyte Count ,Genetic Diversity and Evolution ,Viral replication ,Insect Science ,HIV-1 ,Cytokines ,Viral load - Abstract
Concurrent sexually transmitted infections (STI) can increase the probability of HIV-1 transmission primarily by increasing the viral load present in semen. In this study, we explored the relationship of HIV-1 in blood and seminal plasma in the presence and absence of urethritis and after treatment of the concurrent STI. Primer ID deep sequencing of the V1/V3 region of the HIV-1 env gene was done for paired blood and semen samples from antiretroviral therapy (ART)-naive men living in Malawi with (n = 19) and without (n = 5) STI-associated urethritis; for a subset of samples, full-length env genes were generated for sequence analysis and to test entry phenotype. Cytokine concentrations in the blood and semen were also measured, and a reduction in the levels of proinflammatory cytokines was observed following STI treatment. We observed no difference in the prevalence of diverse compartmentalized semen-derived lineages in men with or without STI-associated urethritis, and these viral populations were largely stable during STI treatment. Clonal amplification of one or a few viral sequences accounted for nearly 50% of the viral population, indicating a recent bottleneck followed by limited viral replication. We conclude that the male genital tract is a site where virus can be brought in from the blood, where localized sustained replication can occur, and where specific genotypes can be amplified, perhaps initially by cellular proliferation but further by limited viral replication. IMPORTANCE HIV-1 infection is a sexually transmitted infection that coexists with other STI. Here, we examined the impact of a concurrent STI resulting in urethritis on the HIV-1 population within the male genital tract. We found that viral populations remain largely stable even with treatment of the STI. These results show that viral populations within the male genital tract are defined by factors beyond transient inflammation associated with a concurrent STI.
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- 2020
- Full Text
- View/download PDF
8. 4308 DEEP-PRIMED IL-15 SUPERAGONIST IMPROVES ANTIVIRAL EFFICACY OF HIV-SPECIFIC CD8+ T-CELLS IN HUMANIZED MOUSE MODEL
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Eva M. Stevenson, Adam R. Ward, R. Brad Jones, Elizabeth Zale, Darrell J. Irvine, Austin Boesch, Thomas Lars Andresen, Ali Danesh, Talia M. Mota, Chase D. McCann, and Thomas R. Dilling
- Subjects
business.industry ,Interleukin 15 ,Humanized mouse ,Immunology ,Human immunodeficiency virus (HIV) ,Medicine ,Cytotoxic T cell ,General Medicine ,business ,medicine.disease_cause - Abstract
OBJECTIVES/GOALS: HIV-specific CD8+ T-cells play a critical role in partially controlling viral replication in infected-individuals, but ultimately fail to eliminate infection. Enhancing these T-cell responses through lymphocyte engineering approaches has the potential as a novel therapy capable of achieving durable control or eradication of infection. METHODS/STUDY POPULATION: IL-15 Superagonist (IL-15SA) potently supports the in vivo persistence and antiviral activity of adoptively transferred CD8+ T-cells. The Deep-PrimingTM technology platform, developed by Torque, allows for loading of immunomodulators onto the surface of T-cells via electrostatic ‘nanogels’, which slowly release to deliver sustained autocrine immune stimulation without the harmful effects of systemic exposure. Here, we investigate the impact of IL-15SA Deep-Priming on HIV-specific CD8+ T-cells in a humanized mouse model of HIV infection. Humanized mice were generated by engrafting NOD-scid-IL2Rgnull mice with memory CD4+ T-cells isolated from an ARV-suppressed HIV+ donor. An autologous HIV-specific Cytotoxic T-Lymphocyte (CTL) clone was isolated, and killing potential confirmed. Four weeks post humanization, mice were infected with HIV and received an infusion of unmodified HIV-Specific CTLs, or IL-15SA Deep-Primed HIV-specific CTLs (CTL-DP). T-cell numbers and plasma viral loads were quantified weekly by flow cytometry and qRT-PCR. RESULTS/ANTICIPATED RESULTS: Mice receiving unmodified CTLs trended toward reduced viral loads compared to the No Treatment condition, while mice receiving CTL-DP saw significant, 2-Log10 reductions in VL (p < 0.01). At 41 days post-infection 100% (5/5) of the No Treatment, 66.7% (4/6) of the CTL treatment, and 16.7% (1/6) of CTL-DP treatment mice had detectable viremia. IL-15SA Deep-Priming increased CTL expansion and persistence in peripheral blood which correlated with improved CD4+T-cell preservation. DISCUSSION/SIGNIFICANCE OF IMPACT: Here we demonstrate the first in vivo analysis of IL-15SA Deep-Priming of HIV-Specific CTLs. These data suggest that Deep-Priming of patient T-cells can enhance in vivo function and persistence, leading to improved viral suppression; a significant advancement in the field of HIV cure research. CONFLICT OF INTEREST DESCRIPTION: Austin Boesch, Thomas Andresen, and Douglas Jones are employees of Torque. Darrell Irvine is a co-founder of Torque and Chairman of Torque’s Scientific Advisory Board.
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- 2020
- Full Text
- View/download PDF
9. Deep Sequencing Reveals Compartmentalized HIV-1 in the Semen of Men with and without STI-associated Urethritis
- Author
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Olivia D. Council, Shuntai Zhou, Chase D. McCann, Irving Hoffman, Gerald Tegha, Deborah Kamwendo, Mitch Matoga, Sergei L. Kosakovsky Pond, Myron S. Cohen, and Ronald Swanstrom
- Subjects
0303 health sciences ,education.field_of_study ,030306 microbiology ,Population ,virus diseases ,Semen ,Biology ,urologic and male genital diseases ,medicine.disease_cause ,medicine.disease ,Virology ,Virus ,Deep sequencing ,3. Good health ,03 medical and health sciences ,Viral replication ,Superinfection ,medicine ,Urethritis ,education ,Viral load ,030304 developmental biology - Abstract
Concurrent sexually transmitted infections (STI) can increase the probability of HIV-1 transmission primarily by increasing the viral load present in semen. In this study, we explored the relationship of HIV-1 in blood and seminal plasma in the presence and absence of urethritis and after treatment of the concurrent STI. Primer ID deep sequencing of the V1/V3 region of the HIV-1envgene was done for paired blood and semen samples from ART-naïve men living in Malawi with (n = 19) and without (n = 5) STI-associated urethritis; for a subset of samples full lengthenvgenes were generated for sequence analysis and to test entry phenotype. Cytokine concentrations in the blood and semen were also measured, and a reduction in the levels of pro-inflammatory cytokines was observed following STI treatment. We observed no difference in the prevalence of diverse compartmentalized semen-derived lineages in men with or without STI-associated urethritis, and these viral populations were largely stable during STI treatment. Clonal amplification of one or a few viral sequences accounted for nearly 50% of the viral population indicating a recent bottleneck followed by limited viral replication. We documented a case of superinfection where the new strain was restricted to the genital tract. We conclude that the male genital tract is a site where virus can be brought in from the blood, where localized sustained replication can occur, where a superinfecting strain can persist, and where specific genotypes can be amplified perhaps initially by cellular proliferation but further by limited viral replication.ImportanceHIV-1 is a sexually transmitted infection that co-exists with other STIs. Here we examine the impact of a concurrent STI resulting in urethritis on the HIV-1 population within the male genital tract. We found that viral populations remain largely stable even with treatment of the STI. These results show that viral populations within the male genital tract are defined by factors beyond transient inflammation associated with a concurrent STI.
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- 2020
- Full Text
- View/download PDF
10. Have Cells Harboring the HIV Reservoir Been Immunoedited?
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Szu-Han Huang, Chase D. McCann, Talia M. Mota, Chao Wang, Steven M. Lipkin, and R. Brad Jones
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0301 basic medicine ,Cytotoxicity, Immunologic ,lcsh:Immunologic diseases. Allergy ,Anti-HIV Agents ,medicine.medical_treatment ,Virus Integration ,Immunology ,Context (language use) ,HIV Infections ,Biology ,CD8-Positive T-Lymphocytes ,Epitope ,immunoediting ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Antigen ,Neoplasms ,Hypothesis and Theory ,medicine ,Immunology and Allergy ,Humans ,cancer ,HIV ,latent reservoir ,Immunotherapy ,3. Good health ,Virus Latency ,030104 developmental biology ,Viral replication ,Immunoediting ,Cancer research ,immunotherapy ,lcsh:RC581-607 ,CD8 ,030215 immunology - Abstract
Immunoediting is an important concept in oncology, delineating the mechanisms through which tumors are selected for resistance to immune-mediated elimination. The recent emergence of immunotherapies, such as checkpoint inhibitors, as pillars of cancer therapy has intensified interest in immunoediting as a constraint limiting the efficacy of these approaches. Immunoediting manifests at a number of levels for different cancers, for example through the establishment of immunosuppressive microenvironments within solid tumors. Of particular interest to the current review, selection also occurs at the cellular level; and recent studies have revealed novel mechanisms by which tumor cells acquire intrinsic resistance to immune recognition and elimination. While the selection of escape mutations in viral epitopes by HIV-specific T cells, which is a hallmark of chronic HIV infection, can be considered a form of immunoediting, few studies have considered the possibility that HIV-infected cells themselves may parallel tumors in having differential intrinsic susceptibilities to immune-mediated elimination. Such selection, on the level of an infected cell, may not play a significant role in untreated HIV, where infection is propagated by high levels of cell-free virus produced by cells that quickly succumb to viral cytopathicity. However, it may play an unappreciated role in individuals treated with effective antiretroviral therapy where viral replication is abrogated. In this context, an "HIV reservoir" persists, comprising long-lived infected cells which undergo extensive and dynamic clonal expansion. The ability of these cells to persist in infected individuals has generally been attributed to viral latency, thought to render them invisible to immune recognition, and/or to their compartmentalization in anatomical sites that are poorly accessible to immune effectors. Recent data from ex vivo studies have led us to propose that reservoir-harboring cells may additionally have been selected for intrinsic resistance to CD8+ T cells, limiting their elimination even in the context of antigen expression. Here, we draw on knowledge from tumor immunoediting to discuss potential mechanisms by which clones of HIV reservoir-harboring cells may resist elimination by CD8+ T cells. The establishment of such parallels may provide a premise for testing therapeutics designed to sensitize tumor cells to immune-mediated elimination as novel approaches aimed at curing HIV infection.
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- 2019
- Full Text
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11. Validation of publicly-available software used in analyzing NGS data for HIV-1 drug resistance mutations and transmission networks in a Washington, DC, Cohort
- Author
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Jeanne A. Jordan, Marcos Pérez-Losada, Alan E. Greenberg, Brittany Wilbourn, Kamwing Jair, Harrison Reed, Amanda D. Castel, and Chase D. McCann
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0301 basic medicine ,Adult ,Data Analysis ,Male ,Anti-HIV Agents ,Science ,030106 microbiology ,Human immunodeficiency virus (HIV) ,HIV Infections ,Computational biology ,Drug resistance ,medicine.disease_cause ,law.invention ,Correlation ,Cohort Studies ,03 medical and health sciences ,law ,Drug Resistance, Viral ,HIV Seropositivity ,medicine ,Humans ,Longitudinal Studies ,Inverse correlation ,Multidisciplinary ,business.industry ,High-Throughput Nucleotide Sequencing ,Homosexuality ,Middle Aged ,Viral Load ,030104 developmental biology ,Transmission (mechanics) ,Cohort ,District of Columbia ,Mutation ,HIV-1 ,Mantel test ,Medicine ,Female ,business ,Software ,Cohort study - Abstract
The DC Cohort is an ongoing longitudinal observational study of persons living with HIV. To better understand HIV-1 drug resistance and potential transmission clusters among these participants, we performed targeted, paired-end next-generation sequencing (NGS) of protease, reverse transcriptase and integrase amplicons. We elected to use free, publicly-available software (HyDRA Web, Stanford HIVdb and HIV-TRACE) for data analyses so that laboratory personnel without extensive bioinformatics expertise could use it; making the approach accessible and affordable for labs worldwide. With more laboratories transitioning away from Sanger-based chemistries to NGS platforms, lower frequency drug resistance mutations (DRMs) can be detected, yet their clinical relevance is uncertain. We looked at the impact choice in cutoff percentage had on number of DRMs detected and found an inverse correlation between the two. Longitudinal studies will be needed to determine whether low frequency DRMs are an early indicator of emerging resistance. We successfully validated this pipeline against a commercial pipeline, and another free, publicly-available pipeline. RT DRM results from HyDRA Web were compared to both SmartGene and PASeq Web; using the Mantel test, R2 values were 0.9332 (p
- Published
- 2019
12. BCL-2 Antagonism Sensitizes CTL-Resistant HIV Reservoirs to Elimination Ex Vivo
- Author
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R. Brad Jones, Alberto Bosque, Szu-Han Huang, Colin C. Kovacs, Avery Wimpelberg, W. David Hardy, Chase D. McCann, Erika Benko, Ryan Durga, Yanqin Ren, Amanda B. Macedo, Christopher Cannon, Dean Magat, Ronald Truong, Thomas Rohwetter, Talia M. Mota, Catherine M. Bollard, Elizabeth Zale, and Shabnum Patel
- Subjects
CTL ,Apoptosis ,Intrinsic resistance ,Antagonist ,Cancer research ,Human immunodeficiency virus (HIV) ,medicine ,Latency (engineering) ,Biology ,Antagonism ,medicine.disease_cause ,Ex vivo - Abstract
Curing HIV infection will require the elimination of a reservoir of infected CD4+ T-cells that persists despite HIV-specific CTL responses. While viral latency is a critical factor in this persistence, recent evidence also suggests a role for intrinsic resistance of reservoir-harboring cells to CTL killing. We explored the hypothesis that this resistance is mediated by BCL-2 family proteins, which can antagonize CTL-induced apoptosis. We show that the reactivatable HIV reservoir is disproportionately present in BCL-2hi CD4+ T-cells, which are relatively resistant to CTL. BCL-2/BCL-XL antagonists were sufficient for inducing the elimination of HIV-infected cells from a primary-cell model of latency, but did not drive reductions in ex vivo viral reservoirs when tested either alone or with a latency reversing agent (LRA). The triple combination of LRAs, HIV-specific T-cells, and a BCL-2 antagonist uniquely enabled depletions in ex vivo viral reservoirs, providing rationale for novel therapeutic approaches targeting HIV cure.
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- 2019
- Full Text
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13. Impact of Educational Interventions on Acceptance and Uptake of Male Circumcision in the General Population of Western China: A Multicenter Cohort Study
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Xiaobo Yang, Chuanyi Ning, Junjun Jiang, Chaohui Zhong, Bo Zhou, Yanyan Liao, Hao Liang, Li Ye, Halmurat Upur, Yunfeng Zou, Chase D. McCann, Abu S. Abdullah, Bingyu Liang, and Bo Qin
- Subjects
Adult ,Male ,China ,Pediatrics ,medicine.medical_specialty ,Adolescent ,Population ,Psychological intervention ,lcsh:Medicine ,HIV Infections ,Article ,Cohort Studies ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,030212 general & internal medicine ,Young adult ,lcsh:Science ,education ,Health Education ,education.field_of_study ,Multidisciplinary ,Proportional hazards model ,business.industry ,lcsh:R ,Patient Acceptance of Health Care ,Circumcision, Male ,030220 oncology & carcinogenesis ,Relative risk ,lcsh:Q ,Health education ,Willingness to accept ,business ,Demography ,Cohort study - Abstract
To compare different intervention models for promoting male circumcision (MC) to prevent HIV transmission in Western China. A total of 1690 male participants from multiple study sites were cluster randomly allocated to three-stage (Model A), two-stage (Model B), and one-stage (Model C) educational interventions. In all three interventions models, knowledge about MC significantly increased and the reported willingness to accept MC increased to 52.6% (255/485), 67.0% (353/527), and 45.5% (219/481) after intervention, respectively (P
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- 2017
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14. Evaluation of MolYsis™ Complete5 DNA extraction method for detecting Staphylococcus aureus DNA from whole blood in a sepsis model using PCR/pyrosequencing
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Jeanne A. Jordan and Chase D. McCann
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DNA, Bacterial ,Microbiology (medical) ,Staphylococcus aureus ,Biology ,medicine.disease_cause ,Polymerase Chain Reaction ,Microbiology ,Article ,Sepsis ,chemistry.chemical_compound ,Dogs ,medicine ,Animals ,Blood culture ,Molecular Biology ,Whole blood ,Bacteriological Techniques ,medicine.diagnostic_test ,Sequence Analysis, DNA ,Staphylococcal Infections ,medicine.disease ,biology.organism_classification ,DNA extraction ,Molecular biology ,Disease Models, Animal ,Molecular Diagnostic Techniques ,chemistry ,Pyrosequencing ,Staphylococcus ,DNA ,Bacteria - Abstract
Bacterial bloodstream infections (BSI) and ensuing sepsis are important causes of morbidity and mortality. Early diagnosis and rapid treatment with appropriate antibiotics are vital for improving outcome. Nucleic acid amplification of bacteria directly from whole blood has the potential of providing a faster means of diagnosing BSI than automated blood culture. However, effective DNA extraction of commonly low levels of bacterial target from whole blood is critical for this approach to be successful. This study compared the Molzyme MolYsis™ Complete5 DNA extraction method to a previously described organic bead-based method for use with whole blood. A well-characterized Staphylococcus aureus-induced pneumonia model of sepsis in canines was used to provide clinically relevant whole blood samples. DNA extracts were assessed for purity and concentration and analyzed for bacterial rRNA gene targets using PCR and sequence-based identification. Both extraction methods yielded relatively pure DNA with median A260/280 absorbance ratios of 1.71 (MolYsis™) and 1.97 (bead-based). The organic bead-based extraction method yielded significantly higher average DNA concentrations (P0.05) at each time point throughout the experiment, closely correlating with changes observed in white blood cell (WBC) concentrations during this same time period, while DNA concentrations of the MolYsis™ extracts closely mirrored quantitative blood culture results. Overall, S. aureus DNA was detected from whole blood samples in 70.7% (58/82) of MolYsis™ DNA extracts, and in 59.8% (49/82) of organic bead-based extracts, with peak detection rates seen at 48h for both MolYsis™ (87.0%) and organic bead-based (82.6%) methods. In summary, the MolYsis™ Complete5 DNA extraction kit proved to be the more effective method for isolating bacterial DNA directly from extracts made from whole blood.
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- 2014
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15. Molecular Detection of Culture-Confirmed Bacterial Bloodstream Infections with Limited Enrichment Time
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Miranda S. Moore, Jeanne A. Jordan, and Chase D. McCann
- Subjects
Microbiology (medical) ,Time Factors ,medicine.drug_class ,Antibiotics ,Bacteremia ,Biology ,DNA, Ribosomal ,Polymerase Chain Reaction ,Microbiology ,law.invention ,law ,medicine ,Humans ,Blood culture ,Prospective Studies ,Polymerase chain reaction ,Bacteriological Techniques ,Bacteria ,medicine.diagnostic_test ,Bacteriology ,Sequence Analysis, DNA ,Ribosomal RNA ,biology.organism_classification ,medicine.disease ,Molecular biology ,Gram staining ,Molecular Diagnostic Techniques ,Pyrosequencing - Abstract
Conventional blood culturing using automated instrumentation with phenotypic identification requires a significant amount of time to generate results. This study investigated the speed and accuracy of results generated using PCR and pyrosequencing compared to the time required to obtain Gram stain results and final culture identification for cases of culture-confirmed bloodstream infections. Research and physician-ordered blood cultures were drawn concurrently. Aliquots of the incubating research blood culture fluid were removed hourly between 5 and 8 h, at 24 h, and again at 5 days. DNA was extracted from these 6 time point aliquots and analyzed by PCR and pyrosequencing for bacterial rRNA gene targets. These results were then compared to those of the physician-ordered blood culture. PCR and pyrosequencing accurately identified 92% of all culture-confirmed cases after a mean enrichment time of 5.8 ± 2.9 h. When the time needed to complete sample processing was included for PCR and pyrosequencing protocols, the molecular approach yielded results in 11.8 ± 2.9 h compared to means of 27.9 ± 13.6 h to obtain the Gram stain results and 81.6 ± 24.0 h to generate the final culture-based identification. The molecular approach enabled accurate detection of most bacteria present in incubating blood culture bottles on average about 16 h sooner than Gram stain results became available and approximately 3 days sooner than the phenotypic identification was entered in the Laboratory Information System. If implemented, this more rapid molecular approach could minimize the number of doses of unnecessary or ineffective antibiotics administered to patients.
- Published
- 2013
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16. Outcome of Sentinel Hospital-based and CDC-based ART Service Delivery: A Prospective Open Cohort of People Living with HIV in China
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Yun Lan, Fengyu Hu, Hao Liang, Joseph D. Tucker, Kumi M Smith, Jinmin Zhao, Weiping Cai, Chuanyi Ning, Chase D. McCann, and Fuchun Zhang
- Subjects
0301 basic medicine ,Adult ,Male ,medicine.medical_specialty ,China ,Adolescent ,Service delivery framework ,030106 microbiology ,Human immunodeficiency virus (HIV) ,HIV Infections ,Kaplan-Meier Estimate ,medicine.disease_cause ,Article ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Public health surveillance ,Acquired immunodeficiency syndrome (AIDS) ,Internal medicine ,Antiretroviral Therapy, Highly Active ,Health care ,Outcome Assessment, Health Care ,medicine ,Humans ,Public Health Surveillance ,030212 general & internal medicine ,Prospective Studies ,Young adult ,Geography, Medical ,Mortality ,Prospective cohort study ,Aged ,Acquired Immunodeficiency Syndrome ,Multidisciplinary ,business.industry ,Middle Aged ,medicine.disease ,3. Good health ,Hospitalization ,Cohort ,Female ,Medical emergency ,business ,Delivery of Health Care - Abstract
The primary objective of this study was to obtain insights into the outcomes of people living with HIV who accessed services through HIV/AIDS sentinel hospital-based and ART service delivery in China. Post-hoc analyses of an open cohort from an observational database of 22 qualified HIV/AIDS sentinel hospital-based and two CDC-based drug delivery facilities (DDFs) in Guangdong Province was completed. Linkage to care, mortality and survival rates were calculated according to WHO criteria. 12,966 individuals received ART from HIV/AIDS sentinel hospitals and 1,919 from DDFs, with linkage to care rates of 80.7% and 79.9%, respectively (P > 0.05). Retention rates were 94.1% and 84.0% in sentinel hospitals and DDFs, respectively (P
- Published
- 2017
17. Sheep Monoclonal Antibodies Prevent Systemic Effects of Botulinum Neurotoxin A1
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Charles B. Shoemaker, Saul Tzipori, Peter Harrison, Kwasi Ofori, Julia Hill, Karen Baldwin, Jean Mukherjee, and Chase D. McCann
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sheep monoclonal antibodies ,medicine.drug_class ,Health, Toxicology and Mutagenesis ,lcsh:Medicine ,BoNT/A1 ,Biology ,Pharmacology ,Toxicology ,Monoclonal antibody ,medicine.disease_cause ,BoNT ,BoNT/A2 ,Article ,Immunoglobulin G ,Mice ,medicine ,Animals ,Potency ,Botulism ,botulinum toxin ,Botulinum Toxins, Type A ,Sheep ,botulism ,Toxin ,lcsh:R ,Toxoid ,Antibodies, Monoclonal ,botulinum neurotoxin ,medicine.disease ,Virology ,Treatment Outcome ,Polyclonal antibodies ,biology.protein ,Female ,passive immunization ,monoclonal antibodies ,immunotherapy ,Antibody - Abstract
Botulinum neurotoxin (BoNT) is responsible for causing botulism, a potentially fatal disease characterized by paralysis of skeletal muscle. Existing specific treatments include polyclonal antisera derived from immunized humans or horses. Both preparations have similar drawbacks, including limited supply, risk of adverse effects and batch to batch variation. Here, we describe a panel of six highly protective sheep monoclonal antibodies (SMAbs) derived from sheep immunized with BoNT/A1 toxoid (SMAbs 2G11, 4F7) or BoNT/A1 heavy chain C-terminus (HcC) (SMAbs 1G4, 5E2, 5F7, 16F9) with or without subsequent challenge immunization with BoNT/A1 toxin. Although each SMAb bound BoNT/A1 toxin, differences in specificity for native and recombinant constituents of BoNT/A1 were observed. Structural differences were suggested by pI (5E2 = 8.2, 2G11 = 7.1, 4F7 = 8.8, 1G4 = 7.4, 5F7 = 8.0, 16F9 = 5.1). SMAb protective efficacy vs. 10,000 LD50 BoNT/A1 was evaluated using the mouse lethality assay. Although not protective alone, divalent and trivalent combinations of SMabs, IG4, 5F7 and/or 16F9 were highly protective. Divalent combinations containing 0.5–4 μg/SMAb (1–8 μg total SMAb) were 100% protective against death with only mild signs of botulism observed, relative efficacy of each combination was 1G4 + 5F7 >, 1G4 + 16F9 >, >, 5F7 + 16F9. The trivalent combination of 1G4 + 5F7 + 16F9 at 0.25 μg/SMAb (0.75 μg total SMAb) was 100% protective against clinical signs and death. These results reflect levels of protective potency not reported previously.
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- 2012
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18. Direct Screening of Blood by PCR and Pyrosequencing for a 16S rRNA Gene Target from Emergency Department and Intensive Care Unit Patients Being Evaluated for Bloodstream Infection
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Miranda S. Moore, Matthew G. McCarroll, Jeanne A. Jordan, N. Younes, Chase D. McCann, Larissa S May, and Ledeboer, NA
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0301 basic medicine ,Male ,Bacteremia ,Medical and Health Sciences ,law.invention ,law ,RNA, Ribosomal, 16S ,80 and over ,Mass Screening ,Blood culture ,Aged, 80 and over ,Emergency Service ,medicine.diagnostic_test ,Bacterial ,Complete blood count ,Hematology ,Middle Aged ,Biological Sciences ,Intensive Care Units ,Gram staining ,Real-time polymerase chain reaction ,Infectious Diseases ,Molecular Diagnostic Techniques ,Female ,Emergency Service, Hospital ,Infection ,Sequence Analysis ,Biotechnology ,Microbiology (medical) ,DNA, Bacterial ,Adult ,16S ,Adolescent ,030106 microbiology ,Biology ,Real-Time Polymerase Chain Reaction ,DNA, Ribosomal ,Sensitivity and Specificity ,Microbiology ,03 medical and health sciences ,Hospital ,Young Adult ,Predictive Value of Tests ,Clinical Research ,Sepsis ,medicine ,Genetics ,Humans ,Mass screening ,Aged ,Ribosomal ,Bacteriological Techniques ,Bacteria ,Agricultural and Veterinary Sciences ,Bacteriology ,Sequence Analysis, DNA ,DNA ,16S ribosomal RNA ,medicine.disease ,Molecular biology ,Pyrosequencing ,RNA - Abstract
Here we compared the results of PCR/pyrosequencing to those of culture for detecting bacteria directly from blood. DNA was extracted from 1,130 blood samples from 913 patients suspected of bacteremia (enrollment criteria were physician-ordered blood culture and complete blood count [CBC]), and 102 controls (healthy blood donors). Real-time PCR assays for beta-globin and Universal 16S rRNA gene targets were performed on all 1,232 extracts. Specimens identified by Universal 16S rRNA gene PCR/pyrosequencing as containing staphylococci, streptococci, or enteric Gram-negative rods had target-specific PCR/pyrosequencing performed. Amplifiable beta-globin (melting temperature [ T m ], 87.2°C ± 0.2°C) occurred in 99.1% (1,120/1,130) of patient extracts and 100% (102/102) of controls. Concordance between PCR/pyrosequencing and culture was 96.9% (1,085/1,120) for Universal 16S rRNA gene targets, with positivity rates of 9.4% (105/1,120) and 11.3% (126/1,120), respectively. Bacteria cultured included staphylococci (59/126, 46.8%), Gram-negative rods (34/126, 27%), streptococci (32/126, 25.4%), and a Gram-positive rod (1/126, 0.8%). All controls screened negative by PCR/pyrosequencing. Clinical performance characteristics (95% confidence interval [CI]) for Universal 16S rRNA gene PCR/pyrosequencing included sensitivity of 77.8% (69.5 to 84.7), specificity of 99.3% (98.6 to 99.7), positive predictive value (PPV) of 93.3% (86.8 to 97.3), and negative predictive value (NPV) of 97.2% (96.0 to 98.2). Bacteria were accurately identified in 77.8% (98/126) of culture-confirmed sepsis samples with Universal 16S PCR/pyrosequencing and in 76.4% (96/126) with follow-up target-specific PCR/pyrosequencing. The initial PCR/pyrosequencing took ∼5.5 h to complete or ∼7.5 h when including target-specific PCR/pyrosequencing compared to 27.9 ± 13.6 h for Gram stain or 81.6 ± 24.0 h for phenotypic identification. In summary, this molecular approach detected the causative bacteria in over three-quarters of all culture-confirmed cases of bacteremia directly from blood in significantly less time than standard culture but cannot be used to rule out infection.
- Published
- 2016
19. Evaluation of real-time PCR and pyrosequencing for screening incubating blood culture bottles from adults with suspected bloodstream infection
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Larissa S May, Matthew G. McCarroll, Chase D. McCann, Miranda S. Moore, and Jeanne A. Jordan
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Male ,ED and ICU patients ,Urine ,PCR/pyrosequencing methods used to more rapidly detect and identify bacteria compared to phenotypic identification ,RNA, Ribosomal, 16S ,80 and over ,Mass Screening ,Prospective Studies ,Aged, 80 and over ,screening and diagnosis ,Bacterial ,General Medicine ,Hematology ,Middle Aged ,23S ,RNA, Ribosomal, 23S ,Detection ,Real-time polymerase chain reaction ,Blood ,Infectious Diseases ,Medical Microbiology ,Female ,Molecular diagnosis ,medicine.symptom ,Infection ,Sequence Analysis ,Biotechnology ,4.2 Evaluation of markers and technologies ,DNA, Bacterial ,Microbiology (medical) ,Adult ,16S ,Clinical Sciences ,Biology ,Real-Time Polymerase Chain Reaction ,DNA, Ribosomal ,Microbiology ,Article ,Sepsis ,Young Adult ,23S ribosomal RNA ,Clinical Research ,medicine ,Humans ,Mass screening ,Screening incubating blood culture bottles for bacteria using a molecular approach ,Aged ,Ribosomal ,Bacteria ,Sequence Analysis, DNA ,DNA ,medicine.disease ,biology.organism_classification ,4.1 Discovery and preclinical testing of markers and technologies ,Pyrosequencing ,Sputum ,RNA ,Bloodstream infections - Abstract
Several molecular platforms can identify bacteria associated with bloodstream infections but require positive culture bottles as starting material. Here, we describe results of screening 1140 blood cultures at 8h postinoculation, from 918 eligible adults being evaluated for bloodstream infection. DNA was extracted and analyzed by 16S and/or 23S rRNA real-time PCR/pyrosequencing. Compared to culture, PCR/pyrosequencing displayed 90.9% sensitivity, 99.6% specificity, 95.7% positive predictive value, and 99.1% negative predictive value. Overall concordance rate was 98.9% (1127/1140). In 4 cases with molecular-positive/culture-negative results, medical chart reviews provided evidence of identical bacteria from subsequent blood or concomitant urine/sputum cultures. Nine culture-positive/molecular-negative cases were associated with either polymicrobial growth, grew only in the anaerobic bottle of the clinical pair, and/or were detected by PCR/pyrosequencing after 8h. In summary, this approach accurately detected and identified bacteria in ~91% of culture-confirmed cases significantly sooner than the phenotypic identification was available, having the potential to improve antibiotic stewardship.
- Published
- 2015
20. Dual Site Sampling Improved Detection Rates for MRSA Colonization in Patients with Cutaneous Abscesses
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Richard E. Rothman, Loren G. Miller, Larissa S May, Chase D. McCann, Gillian Brooks, and Jeanne A. Jordan
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Nasal cavity ,Male ,Infection control ,medicine.disease_cause ,80 and over ,Colonization ,Prospective Studies ,Abscess ,Aged, 80 and over ,education.field_of_study ,General Medicine ,Middle Aged ,Staphylococcal Infections ,Infectious Diseases ,medicine.anatomical_structure ,Medical Microbiology ,Staphylococcus aureus ,Carrier State ,Female ,Nasal Cavity ,Microbiology (medical) ,Adult ,Methicillin-Resistant Staphylococcus aureus ,medicine.medical_specialty ,Adolescent ,Clinical Sciences ,Population ,Staphylococcal infections ,Microbiology ,Sensitivity and Specificity ,Article ,Young Adult ,Clinical Research ,Internal medicine ,Molecular diagnostics ,medicine ,Humans ,education ,Aged ,Bacteriological Techniques ,Emergency department ,business.industry ,Prevention ,medicine.disease ,bacterial infections and mycoses ,Methicillin-resistant Staphylococcus aureus ,Emerging Infectious Diseases ,Antimicrobial Resistance ,business ,Cutaneous abscess - Abstract
Extranasal sites are common reservoirs of Staphylococcus aureus colonization and may be relevant for methicillin-resistant S. aureus (MRSA) screening and infection control strategies. The objective here was to determine whether inguinal specimens could also be screened using Xpert SA Nasal Complete assay for MRSA. Results were compared to broth enrichment culture. Among 162 consented adults seeking care in the emergency department for cutaneous abscesses, inguinal specimens were found positive for MRSA more often than nares specimens, 24% and 26% by PCR or culture, respectively, compared to 19% each by PCR or culture. Overall, 6% of adults colonized with MRSA would have been missed by nares screening alone. Compared to culture, Xpert SA Nasal Complete assay demonstrated sensitivity and specificity of 89% and 97%, respectively, for detecting nares and/or inguinal MRSA colonization. In conclusion, inguinal specimens were a more common reservoir for MRSA than nares specimens in this population of patients.
- Published
- 2014
21. Mortality and retention in hospital-based and CDC-based antiretroviral service delivery in people living with HIV in the Guangdong Province, China: a prospective cohort study
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Kumi M Smith, Joseph D. Tucker, Weiping Cai, Yun Lan, Chuanyi Ning, Fuchun Zhang, Fengyu Hu, Hao Liang, Jinmin Zhao, and Chase D. McCann
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medicine.medical_specialty ,Pediatrics ,Service delivery framework ,business.industry ,Hazard ratio ,General Medicine ,Guideline ,medicine.disease ,Institutional review board ,Acquired immunodeficiency syndrome (AIDS) ,Informed consent ,Family medicine ,Cohort ,medicine ,Prospective cohort study ,business - Abstract
Background Enormous efforts have been made to decentralise HIV service delivery in China, gradually developing a network of thousands of Centres For Disease Control And Prevention (CDCs) with or without local hospitals providing antiretroviral therapy (ART) to every village or equivalent. However, in the Guangdong Province, China, most infected patients from CDCs delivering HIV services have been switched to sentinel hospitals, providing an opportunity to examine this shift on linkage to care, retention, and mortality among people living with HIV. We examined long-term outcomes of people living with HIV who accessed services through sentinel hospitals and CDCs in the Guangdong Province. Methods This is a post-hoc analyses of an open cohort from an observational database of 22 qualified HIV/AIDS sentinel hospitals and two CDC-based drug delivery health facilities in Guangdong. We recruited all outpatients of health facilities receiving ART from Jan 1, 2005, to June 1, 2014. Patients were excluded if they did not start triple drug therapy based ART, had missing treatment regimen information, or used ART outside of national guidelines. We followed up the patients for 10 years. We defined and calculated linkage to initial ART, mortality, overall survival, and retention rate according to the WHO Guideline 2006 for ART in HIV infection in adult. The institutional review board of the Guangzhou Eighth People's Hospital approved this analysis. Written informed consent was obtained from all patients. Findings Of the 18 921 people living with HIV, 14 885 (79%) were initiated ART with follow-up, and thus were available for analysis. Among these participants, 12 966 (87%) individuals received ART from hospitals and 1919 (13%) received ART from a CDC, the linkage to care was 80·7% in hospitals and 79·9% in CDC facilities (p=0·352). Excess mortality was 1·4 deaths per 100 person-years (95% CI 1·1–1·8) in CDC facilities compared with 0·4 deaths per 100 person-years (0·3–0·5) in hospitals (p=0·001). A Cox-regression analysis showed that mortality was much higher in patients receiving ART from the CDC-based health facilities than in those receiving ART from the sentinel hospitals, with an adjusted hazard ratio (HR) of 3·3 (95% CI 2·3–4·6). Kaplan–Meier analysis showed a mean overall survival time of 105·3 months (95% CI 104·6–106·1) in the hospital group compared with 78·7 months (76·2–81·2) in the CDC group (p Interpretation Sentinel hospital HIV service delivery had better retention, and substantially lower mortality than did CDC-based service delivery. This study has implications for the expansion HIV service delivery, and should be made to adopt a sentinel hospital-based system of integrated HIV care and treatment. Funding This study was supported by Twelve Fifth Key Research grant from the Ministry of Science and Technology, People's Republic of China ( 2012ZX10001003–003 ), Science and Technology Program of Guangzhou ( 201300000092 ), and the US National Institutes of Health Fogarty International Center Global Infectious Diseases Training Grant ( 1D43TW009532–01 ). These fundings had no role in study design and data analyses.
- Published
- 2016
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22. 342 Clinical Decisionmaking and Antibiotic Use in Patients With Abscesses After Rapid Point-of-Care MRSA/MSSA Testing in the Emergency Department
- Author
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M. Smith, Larissa S May, Jeanne A. Jordan, N. Rabinowitz, Richard E. Rothman, E. Dissen, Chase D. McCann, and B. Malott
- Subjects
medicine.medical_specialty ,business.industry ,Emergency medicine ,Emergency Medicine ,Medicine ,In patient ,Emergency department ,Medical emergency ,Antibiotic use ,business ,medicine.disease ,Point of care - Published
- 2011
- Full Text
- View/download PDF
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