90 results on '"Charles M. Allen"'
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2. Math Shelf: A Randomized Trial of a Prekindergarten Tablet Number Sense Curriculum
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Jeff Shih, Lina DeVaul, Charles M. Allen, Taro Ito, Booil Jo, John Schacter, and Amy B. Adkins
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Teaching method ,education ,05 social sciences ,Educational technology ,050301 education ,Number sense ,behavioral disciplines and activities ,Education ,law.invention ,Test (assessment) ,Randomized controlled trial ,law ,Head start ,Developmental and Educational Psychology ,Mathematics education ,0501 psychology and cognitive sciences ,Psychology ,0503 education ,Curriculum ,At-risk students ,050104 developmental & child psychology - Abstract
Research Findings: Effective preschool mathematics instruction is especially important for low-income children. Previous research demonstrates that low-income children enter kindergarten behind their middle-income peers. They receive less mathematics support at home and from public preschools. The aim of this study was to test Math Shelf, a tablet intervention designed to improve at-risk preschoolers’ mathematics performance. A total of 100 children participated in a randomized controlled trial in a large urban Head Start center. Intervention students played Math Shelf on tablet computers for 6 weeks, whereas comparison students played the most downloaded and best reviewed preschool math apps on tablets for an equal amount of time. During game play, graduate student researchers supervised intervention and comparison students in separate rooms. Intervention and comparison groups did not differ on pretest assessments. Math Shelf students performed statistically significantly better (Cohen’s d = 0.57...
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- 2015
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3. Synopsis of the Woody Species of Smilax in the Eastern United States North of Peninsular Florida
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A. J. Bullard and Charles M. Allen
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Geography ,biology ,Habitat ,Ecology ,Range (biology) ,Smilax ,Key (lock) ,Forestry ,biology.organism_classification - Abstract
The nine woody species of Smilax (S. auriculata, S. bona-nox, S. glauca, S. laurifolia, S. pumila, S. rotundifolia, S. smallii, S. tamnoides, and S. walteri) of the eastern United States north of peninsular Florida are described through the use of charts. The habitat, range, common names, and synonyms for each are listed. A key to the nine species is provided.
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- 2013
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4. Adlumia fungosa (Fumariaceae), New to the Flora of LOUISIANA (U.S.A.)
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Charles M Allen
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Adlumia fungosa ,Flora ,Geography ,biology ,Botany ,Plant Science ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Abstract
Allegheny Vine Adlumia fungosa (Fumariaceae) is reported new to Louisiana, U.S.A.
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- 2017
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5. Characterization of a PRL protein tyrosine phosphatase from Plasmodium falciparum☆
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Prakash Rao Pendyala, Ratna Chakrabarti, Melissa Schreiber, Debopam Chakrabarti, Connie Pham, David A. Fidock, Lawrence Ayong, Jennifer Eatrides, and Charles M. Allen
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Farnesyltransferase ,Molecular Sequence Data ,Plasmodium falciparum ,Phosphatase ,Protein Prenylation ,Protozoan Proteins ,Antigens, Protozoan ,Protein tyrosine phosphatase ,Endoplasmic Reticulum ,Prenylation ,parasitic diseases ,Animals ,Farnesyltranstransferase ,Amino Acid Sequence ,Enzyme Inhibitors ,Molecular Biology ,Sequence Homology, Amino Acid ,biology ,Gene Expression Profiling ,Endoplasmic reticulum ,Membrane Proteins ,Apical membrane ,biology.organism_classification ,Cell biology ,Protein Transport ,Biochemistry ,Vacuoles ,biology.protein ,Protein prenylation ,Parasitology ,Protein Tyrosine Phosphatases ,Oligopeptides - Abstract
Isoprenylated proteins have important functions in cell growth and differentiation of eukaryotic cells. Inhibitors of protein prenylation in malaria have recently shown strong promise as effective antimalarials. In studying protein prenylation in the malaria protozoan parasite Plasmodium falciparum , we have shown earlier that the incubation of P. falciparum cells with 3 H-prenol precursors resulted in various size classes of labeled proteins. To understand the physiological function of prenylated proteins of malaria parasites, that are targets of prenyltransferase inhibitors, we searched the PlasmoDB database for proteins containing the C-terminus prenylation motif. We have identified, among other potentially prenylated proteins, an orthologue of a PRL (protein of regenerating liver) subgroup protein tyrosine phosphatases, termed PfPRL. Here, we show that PfPRL is expressed in the parasite's intraerythrocytic stages, where it partially associates with endoplasmic reticulum and within a subcompartment of the food vacuole. Additionally, PfPRL targeting parallels that of apical membrane antigen-1 in developing merozoites. Recombinant PfPRL shows phosphatase activity that is preferentially inhibited by a tyrosine phosphatase inhibitor suggesting that PfPRL functions as a tyrosine phosphatase. Recombinant PfPRL can also be farnesylated in vitro . Inhibition of malarial farnesyltransferase activity can be achieved with the heptapetide RKCHFM, which corresponds to the C-terminus of PfPRL. This study provides the first evidence for expression of enzymatically active PRL-related protein tyrosine phosphatases in malarial parasites, and demonstrates the potential of peptides derived from Plasmodium prenylated proteins as malarial farnesyltransferase inhibitors.
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- 2008
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6. Watson Brake, a Middle Archaic Mound Complex in Northeast Louisiana
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Roger T. Saucier, Malcolm F. Vidrine, C. T. Hallmark, C. Garth Sampson, Joe W. Saunders, Reca Jones, Gary L. Stringer, Daniel A. Bush, H. Edwin Jackson, James K. Feathers, Charles M. Allen, Jay K. Johnson, Kristen J. Gremillion, Rolfe D. Mandel, and E. Thurman Allen
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010506 paleontology ,Archeology ,History ,060102 archaeology ,Terrace (agriculture) ,Museology ,06 humanities and the arts ,01 natural sciences ,Coring ,Debris ,Archaeology ,Midden ,law.invention ,Arts and Humanities (miscellaneous) ,law ,Earthworks ,0601 history and archaeology ,Radiocarbon dating ,Tumulus ,0105 earth and related environmental sciences ,Terroir - Abstract
Middle Archaic earthen mound complexes in the lower Mississippi valley are remote antecedents of the famous but much younger Poverty Point earthworks. Watson Brake is the largest and most complex of these early mound sites. Very extensive coring and stratigraphic studies, aided by 25 radiocarbon dates and six luminescence dates, show that minor earthworks were begun here at ca. 3500 B.C. in association with an oval arrangement of burned rock middens at the edge of a stream terrace. The full extent of the first earthworks is not yet known. Substantial moundraising began ca. 3350 B.C. and continued in stages until some time after 3000 B.C. when the site was abandoned. All 11 mounds and their connecting ridges were occupied between building bursts. Soils formed on some of these temporary surfaces, while lithics, fire-cracked rock, and fired clay/loam objects became scattered throughout the mound fills. Faunal and floral remains from a basal midden indicate all-season occupation, supported by broad-spectrum foraging centered on nuts, fish, and deer. All the overlying fills are so acidic that organics have not survived. The area enclosed by the mounds was kept clean of debris, suggesting its use as ritual space. The reasons why such elaborate activities first occurred here remain elusive. However, some building bursts covary with very well-documented increases in El Niño/Southern Oscillation events. During such rapid increases in ENSO frequencies, rainfall becomes extremely erratic and unpredictable. It may be that early moundraising was a communal response to new stresses of droughts and flooding that created a suddenly more unpredictable food base.
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- 2005
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7. Article questioned
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Charles M. Allen
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Cocaine-Related Disorders ,Prescription Drug Diversion ,Dental Offices ,Humans ,Anesthetics, Local ,General Dentistry - Published
- 2014
8. Enhanced Prenyltransferase Activity and Rab Content in Rat Liver Regeneration
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Anna Trentalance, Charles M. Allen, Barbara Barbaro, and Giovannella Bruscalupi
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Male ,Prenyltransferase ,Protein Prenylation ,Biophysics ,Prenyltransferase activity ,Biology ,Endocytosis ,Biochemistry ,Exocytosis ,Rats, Sprague-Dawley ,Prenylation ,Animals ,Molecular Biology ,Cell Cycle ,Cell Biology ,Dimethylallyltranstransferase ,Liver regeneration ,Liver Regeneration ,Rats ,Cell biology ,Liver ,rab GTP-Binding Proteins ,Protein prenylation ,Rab ,Cell Division ,Subcellular Fractions - Abstract
Rabs are small GTP-binding proteins with a regulatory role in intracellular vesicular traffic. The modulation of their levels and activity in different physiological situations is poorly understood. During the first cell cycle of rat liver regeneration we observed a differential regulation of some Rabs, with a progressive increase of those involved in exocytosis and a progressive decrease of one involved in endocytosis. This could be related with the need of exposing growth factor receptors and prolonging the transduction of their signal in preparation for mitosis. Moreover, we observed an increased activity of protein prenyltransferases, the enzymes responsible for the prenylation of several proteins involved in crucial processes of proliferation, without a corresponding increase in the amount of prenyltransferase protein.
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- 2000
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9. Protein prenyl transferase activities of Plasmodium falciparum
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Tania Azam, Libo Qiu, Cherie Delvecchio, Debopam Chakrabarti, Charles M. Allen, and Yong-Il Park
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chemistry.chemical_classification ,Chromatography ,Geranylgeranyl Transferase ,Farnesyltranstransferase ,Alkyl and Aryl Transferases ,Erythrocytes ,Peptidomimetic ,Plasmodium falciparum ,Protein Prenylation ,Biology ,biology.organism_classification ,Molecular biology ,In vitro ,Enzyme ,chemistry ,Biochemistry ,Prenylation ,parasitic diseases ,Animals ,Humans ,Protein prenylation ,Parasitology ,Molecular Biology - Abstract
Prenylated proteins have been shown to function in important cellular regulatory processes including signal transduction. The enzymes involved in protein prenylation, farnesyl transferase and geranylgeranyl transferase, have been recent targets for development of cancer chemotherapeutics. We have initiated a systematic study of protein prenyl transferases of the malaria parasite, Plasmodium falciparum, to determine whether these enzymes can be developed as targets for antimalarial chemotherapy. We report here the identification of protein farnesyl transferase and protein geranylgeranyl transferase-I in the malaria parasite, P. falciparum. The farnesyl transferase has been partially purified from the cytosolic fraction through ammonium sulfate precipitation and Mono-Q chromatography. Farnesyl and geranylgeranyl transferase-I activities are present at all stages of P. falciparum intraerythrocytic development with maximum specific activity in the ring stage. Geranylgeranyl transferase-I specific activity is two times that of farnesyl transferase in the ring stage. Peptidomimetics and prenyl analogues of protein farnesyl transferase substrates were tested as in vitro inhibitors of partially purified P. falciparum prenyl transferase and of malaria parasite growth. The peptidomimetics were significantly more potent inhibitors than lipid substrate analogues of both the activity of Mono-Q purified enzyme and parasite growth in intraerythrocytic cultures. Exposure of the parasite to the peptidomimetic L-745,631 also showed significant inhibition of morphological development beyond the trophozoite stage. These studies suggest the potential of designing or identifying differential inhibitors of P. falciparum and mammalian prenyl transferases as an approach to novel malaria therapy.
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- 1998
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10. A Mound Complex in Louisiana at 5400-5000 Years Before the Present
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Stephen R. Williams, E. Thurman Allen, Roger T. Saucier, C. T. Hallmark, James K. Feathers, Charles M. Allen, Jay K. Johnson, Kristen J. Gremillion, Joe W. Saunders, Gary L. Stringer, Reca Jones, Rolfe D. Mandel, Edwin H. Jackson, Douglas S. Frink, and Malcolm F. Vidrine
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Multidisciplinary ,Pedogenesis ,Geography ,Plant species ,Aquatic resources ,Radiometric dating ,Before Present ,Archaeology - Abstract
An 11-mound site in Louisiana predates other known mound complexes with earthen enclosures in North America by 1900 years. Radiometric, luminescence, artifactual, geomorphic, and pedogenic data date the site to over 5000 calendar years before present. Evidence suggests that the site was occupied by hunter-gatherers who seasonally exploited aquatic resources and collected plant species that later became the first domesticates in eastern North America.
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- 1997
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11. Changes in Protein Prenylation and Prenyltransferase Activity in the Rat Seminiferous Epithelium during Early Stages of Spermatogenesis1
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Charles M. Allen and Jan M. Dugan
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biology ,Farnesyltransferase ,Prenyltransferase activity ,Cell Biology ,General Medicine ,Testicle ,Cell biology ,Seminiferous tubule ,medicine.anatomical_structure ,Protein prenyltransferase activity ,Reproductive Medicine ,Biochemistry ,Prenylation ,medicine ,biology.protein ,Protein prenylation ,Spermatogenesis - Abstract
Changes in protein prenyltransferase activity, levels of prenylated protein, and the type of isoprenoid modification was described in cells of rat seminifereous epithelium and correlated with differentiative events of spermatogenesis. The activity of protein farnesyltransferase (PFT) was at least 10-fold higher than that for protein geranylgeranyltransferase-I (PGGT-I) in seminiferous epithelium and spermatogenic cells of prepubertal rats of different ages. Both activities increased during the meiotic stages of differentiation and peaked at 23 days of age. The activity of farnesyltransferase in seminiferous epithelium was the same as that in mixed spermatogenic cell populations from animals aged 9 and 23 days, indicating that the activity of this enzyme in somatic cells and germ cells was similar at these ages. Farnesyltransferase activities were similar and low in both pachytene spermatocytes and round spermatids from adult rats; however, the activity in pachytene spermatocytes from 23-day old animals was 2-fold higher than in adults. The highest activity was associated with intermediate-sized spermatocytes appearing late during meiosis. PGGT-I activity was at least 10-fold lower than farnesyltransferase activity and was not significantly different among all cell populations. Differentiation-dependent in vivo protein prenylation was demonstrated by labeling of seminiferous epithelium with [3H]mevalonic acid at different prepubertal ages. Total protein prenylation and the ratio of geranylgeranylated to farnesylated protein, in contrast to prenyltransferase activity, decreased with increasing age. Although 20-30-kDa proteins were the most highly labeled at all ages, [3H]-proteins from different-aged prepubertal rats showed age-dependent changes in the level of prenylation of at least 14 proteins as determined by two-dimensional (2D) electrophoresis. Prenylated proteins of round spermatids were distinguished from those of the spermatocytes by the lack of many 20-30-kDa proteins and by low geranylgeranyl/farnesyl (GG/F) ratios. These results show that independent changes in prenyltransferase activity and protein prenylation accompany the differentiation events during the premeiotic and meiotic stages of spermatogenesis. This suggests that prenylation in the seminiferous epithelium may be more dependent on available protein substrate than on protein prenyltransferase activity.
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- 1995
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12. Photoreactive Analogues of Prenyl Diphosphates as Inhibitors and Probes of Human Protein Farnesyltransferase and Geranylgeranyltransferase Type I
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Charles A. Omer, Yuri Bukhtiyarov, and Charles M. Allen
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Alkyl and Aryl Transferases ,biology ,Geranylgeranyltransferase type-I ,Chemistry ,Stereochemistry ,Affinity label ,Farnesyltransferase ,Substrate (chemistry) ,Affinity Labels ,Diazonium Compounds ,Cell Biology ,Biochemistry ,Recombinant Proteins ,Terpenoid ,Protein geranylgeranyltransferase ,law.invention ,Prenylation ,Transferases ,law ,biology.protein ,Recombinant DNA ,Humans ,Molecular Biology - Abstract
Photoreactive analogues of prenyl diphosphates have been useful in studying prenyltransferases. The effectiveness of analogues with different chain lengths as probes of recombinant human protein prenyltransferases is established here. A putative geranylgeranyl diphosphate analogue, 2-diazo-3,3,3-trifluoropropionyloxy-farnesyl diphosphate (DATFP-FPP), was the best inhibitor of both protein farnesyltransferase (PFT) and protein geranylgeranyltransferase-I (PFFT-I). Shorter photoreactive isprenyl diphosphate analogues with geranyl and dimethylallyl moieties and the DATFP-derivative of farnesyl monophosphate were much poorer inhibitors. DATFP-FPP was a competitive inhibitor of both PFT and PGGT-I with Ki values of 100 and 18 nM, respectively. [32P]DATFP-FPP specifically photoradiolabelled the beta-subunits of both PFT and PGGT-I. Photoradiolabelling of PGGT-I was inhibited more effectively by geranylgeranyl diphosphate than farnesyl diphosphate, whereas photoradiolabelling of PFT was inhibited better by farnesyl diphosphate than geranylgeranyl diphosphate. These results lead to the conclusions that DATFP-FPP is an effective probe of the prenyl diphosphate binding domains of PFT and PGGT-I. Furthermore, the beta-subunits of protein prenyltransferases must contribute significantly to the recognition and binding of the isoprenoid substrate.
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- 1995
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13. A syntax-directed logic simulator.
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Charles M. Allen, Donald D. Givone, William M. Horner, and Robert W. Snelsire
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- 1968
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14. Amplification of the bacA gene confers bacitracin resistance to Escherichia coli
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P J Norton, Harry S. Nick, Charles M. Allen, W Eubanks, and Brian D. Cain
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DNA, Bacterial ,Molecular Sequence Data ,Restriction Mapping ,Lipid kinase activity ,Bacitracin ,Biology ,medicine.disease_cause ,Microbiology ,Plasmid ,Bacterial Proteins ,Escherichia coli ,medicine ,Genomic library ,Amino Acid Sequence ,Kinase activity ,Molecular Biology ,Peptide sequence ,Base Sequence ,Phosphotransferases ,Nucleic acid sequence ,Chromosome Mapping ,Drug Resistance, Microbial ,Molecular biology ,Mutagenesis, Insertional ,Phosphotransferases (Alcohol Group Acceptor) ,Solubility ,Biochemistry ,Genes, Bacterial ,Plasmids ,Research Article ,medicine.drug - Abstract
An Escherichia coli genomic library was constructed in order to facilitate selection for genes which confer bacitracin resistance through amplification. One of the plasmids from the library, plasmid pXV62, provided a high level of bacitracin resistance for E. coli. Deletion and nucleotide sequence analyses of bacitracin resistance plasmid pXV62 revealed that a single open reading frame, designated the bacA gene, was sufficient for antibiotic resistance. The bacA gene mapped to approximately 67 min on the E. coli chromosome by proximity to a previously mapped locus. The deduced amino acid sequence of the bacA-encoded protein suggests an extremely hydrophobic protein of 151 amino acids, approximately 65% of which were nonpolar amino acids. E. coli cells containing plasmid pXV62 have increased isoprenol kinase activity. The physical characteristics of the deduced protein and enhanced lipid kinase activity suggest that the bacA gene may confer resistance to bacitracin by phosphorylation of undecaprenol.
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- 1993
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15. Characterization of recombinant human farnesyl-protein transferase: Cloning, expression, farnesyl diphosphate binding, and functional homology with yeast prenyl-protein transferases
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Nancy E. Kohl, Jackson B. Gibbs, Ronald E. Diehl, Scott Powers, Charles M. Allen, Astrid M. Kral, Charles A. Omer, and George C. Prendergast
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Farnesyl Protein Transferase ,Farnesyltransferase ,Protein subunit ,Molecular Sequence Data ,Saccharomyces cerevisiae ,Gene Expression ,Biology ,Molecular cloning ,Biochemistry ,Structure-Activity Relationship ,Polyisoprenyl Phosphates ,Prenylation ,Isoprenoid binding ,Transferases ,Escherichia coli ,Animals ,Farnesyltranstransferase ,Humans ,Transferase ,Amino Acid Sequence ,Cloning, Molecular ,Alkyl and Aryl Transferases ,Base Sequence ,Sequence Homology, Amino Acid ,DNA ,biology.organism_classification ,Molecular biology ,Recombinant Proteins ,Rats ,Kinetics ,Mutation ,biology.protein ,Cattle ,Sesquiterpenes - Abstract
We have isolated cDNAs encoding the alpha and beta subunits of human farnesyl-protein transferase (FPTase). The proteins encoded by these two cDNAs are 93-95% identical to the corresponding subunits of bovine and rat FPTase and show regions of homology with proteins encoded by Saccharomyces cerevisiae prenyl-protein transferase genes. Human FPTase expressed in Escherichia coli from a translationally coupled operon had kinetic properties similar to those of FPTase isolated from bovine brain. Examination of farnesyl diphosphate binding indicated that while neither individual subunit was capable of isoprenoid binding, a radiolabeled farnesyl diphosphate analog could be specifically photo-cross-linked to the beta subunit of FPTase holoenzyme. To further analyze subunit structure-function and to detect functional similarities with yeast prenyl-protein transferases (FPTase and two geranylgeranyl-protein transferases), amino acid changes homologous to those found in mutant yeast prenyl-protein transferase subunits were made in the subunits of human FPTase. Substitutions in either the alpha or beta subunits that decrease the activity of yeast prenyl-protein transferases were also observed to impair human FPTase. Kinetic analyses showed that these mutant human FPTases have Km and kcat values that are altered with respect to wild-type human FPTase.
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- 1993
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16. A Minimization Technique for Multiple-Valued Logic Systems.
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Charles M. Allen and Donald D. Givone
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- 1968
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17. Evidence for prenylation-dependent targeting of a Ykt6 SNARE in Plasmodium falciparum
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Thiago DaSilva, Charles M. Allen, Jennifer Mauser, Debopam Chakrabarti, and Lawrence Ayong
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Cytoplasm ,Erythrocytes ,Mutant ,Amino Acid Motifs ,Plasmodium falciparum ,Protein Prenylation ,Golgi Apparatus ,Biology ,environment and public health ,Article ,symbols.namesake ,Geranylgeranylation ,Prenylation ,Escherichia coli ,Farnesyltranstransferase ,Molecular Biology ,Gene ,Sequence Deletion ,Microscopy, Confocal ,Intracellular Membranes ,Golgi apparatus ,biology.organism_classification ,Cell biology ,Transport protein ,Protein Transport ,Biochemistry ,Microscopy, Fluorescence ,symbols ,Protein prenylation ,Parasitology ,Mutant Proteins ,SNARE Proteins - Abstract
Ykt6 proteins are the most versatile fusogens in eukaryotic cells, and the only SNAREs that can be both prenylated and acylated at a C-terminal CAAX motif. Unlike yeast and mammalian cells where a single Ykt6 gene is expressed, the Plasmodium falciparum genome encodes two Ykt6 proteins. We have investigated the expression and prenylation of the Ykt6 orthologue, PfYkt6.1 in intra-erythrocytic stages of P. falciparum. PfYkt6.1 localized to the parasite Golgi and other unidentified cytoplasmic compartments, and was partly cytosolic (∼50% in early trophozoites). The membrane-association of PfYkt6.1 was dependent on the presence of a conserved C-terminal CAAX motif (CCSIM). By expressing full-length and mutant proteins in Escherichia coli, we have shown that PfYkt6.1 indeed serves as substrate for prenylation by P. falciparum farnesyltransferases. Surprisingly, PfYkt6.1 could also be geranylgeranylated by parasite extracts independent of the C-terminal amino acid residue. Deletion of the CAAX motif inhibited both farnesylation and geranylgeranylation activities. Additionally, the PfYkt6.1 heptapeptide KQCCSIM, corresponding to the C-terminal CAAX sequence, inhibited the parasite farnesyltransferase activity with an IC50 of 1 μM. Our findings underscore the importance of CAAX motif-derived peptidomimetics for antimalarial drug development.
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- 2010
18. Fibric acid derivatives: effects on the synthesis of isoprenoid lipids in cultured human lymphocytes
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Charles M. Allen, Alison Henry, and Peter W. Stacpoole
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Ubiquinone ,Biophysics ,Mevalonic Acid ,Fibric Acids ,Acetates ,Biology ,Biochemistry ,chemistry.chemical_compound ,Endocrinology ,Dolichol ,Biosynthesis ,Dolichols ,Tumor Cells, Cultured ,medicine ,Humans ,Clofibrate ,Lymphocytes ,Cholesterol ,Hydroxymethylglutaryl-CoA reductase activity ,Hydroxymethylglutaryl-CoA reductase ,Metabolic pathway ,chemistry ,lipids (amino acids, peptides, and proteins) ,Gemfibrozil ,Cell Division ,medicine.drug - Abstract
Fibric acid derivatives have been demonstrated to reduce circulating lipoprotein and triacylglycerol concentrations and to inhibit hydroxymethylglutaryl CoA reductase, a key regulatory enzyme of cholesterol biosynthesis. This study describes the effect of four fibric acid derivatives on the biosynthesis of isoprenoid products from acetate and mevalonate in Molt-4 cells, a human leukemic T-lymphocyte cell line. The isoprenoids analyzed were cholesterol as well as dolichol and ubiquinone, alternative products of the branched isoprenoid biosynthetic pathway. None of the fibric acid derivatives showed significant effects on the synthesis of cholesterol from acetate or mevalonate and there was little change in the flux of these metabolites into either dolichol and ubiquinone compared to cells grown in drug-free medium. Therefore, in contrast to the reported inhibitory effects of fibric acids on hepatic sterol synthesis in rats and humans and on hydroxymethylglutaryl CoA reductase activity in human nonmalignant lymphocytes, our results show that these drugs do not significantly affect any of the post-reductase enzymes in the branched metabolic pathways leading from acetate to dolichol, ubiquinone and cholesterol in short term culturing of human malignant lymphocytes.
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- 1992
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19. Inhibition of farnesyl transferases from malignant and non-malignant cultured human lymphocytes by prenyl substrate analogues
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Nagaratnam P. Das and Charles M. Allen
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Molecular Sequence Data ,Biophysics ,Substrate analog ,Biology ,environment and public health ,Biochemistry ,Pentapeptide repeat ,law.invention ,Proto-Oncogene Proteins p21(ras) ,chemistry.chemical_compound ,Polyisoprenyl Phosphates ,Prenylation ,Transferases ,law ,Tumor Cells, Cultured ,Humans ,Amino Acid Sequence ,Molecular Biology ,chemistry.chemical_classification ,Alkyl and Aryl Transferases ,Leukemia ,organic chemicals ,Cell Biology ,T lymphocyte ,body regions ,Cytosol ,Enzyme ,chemistry ,Cell culture ,Recombinant DNA ,lipids (amino acids, peptides, and proteins) ,Sesquiterpenes - Abstract
Cytosolic prenyl transferases from two human lymphoid tissue-derived cell lines, IM-9 and Molt-4 cells, are shown to isoprenylate recombinant p21 H-ras . Isoprenylation was inhibited by an N-acetylated pentapeptide (N-Ac-Lys-Cys-Val-Leu-Ser), c , t -farnesyl diphosphate, c , t , t -geranylgeranyl diphosphate, t , t , t -geranylgeranyl diphosphate and a photolabile farnesyl diphosphate analogue. c , t -Farnesyl and t , t , t -geranylgeranyl monophosphates were also effective inhibitors of the Molt-4 enzyme but not the IM-9 enzyme.
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- 1991
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20. Cyperus esculentus
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R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, and R. Dale Thomas, Charles M. Allen
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Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1393348%5DMICH-V-1393348, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1393348/MICH-V-1393348/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1991
21. P-78 Early evaluation of the impact of a nurse-led approach solely supporting advance care planning
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Rebecca Thomas and Charles M Allen
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Advance care planning ,Health professionals ,Oncology (nursing) ,business.industry ,Early signs ,Medicine (miscellaneous) ,General Medicine ,medicine.disease ,humanities ,Medical–Surgical Nursing ,Nurse led ,Nursing ,Medicine ,Dementia ,Public support ,business ,Competence (human resources) - Abstract
Background Locally, research has highlighted significant avoidable end of life admissions. Improving skills and communication for professionals is essential for care delivery. Despite numerous policies advocating advance care planning (ACP) health professionals continue to lack confidence to initiate these conversations. Aim To evaluate the impact of a nurse-led approach to advance care planning, reflecting patient’s values, preferences and to reduce avoidable hospital admissions at end of life. Methods ACP Nurse Specialists have been appointed whose time is designated solely to support, facilitate, educate and raise awareness of this process, working collaboratively to identify those in the final months of life. Health professionals’ needs were identified varied resources have been developed, tailored to the individual needs of care providers/client groups. Results Though the project is in its infancy there is evidence of increased awareness and requests from other professionals for support to discuss and document ACP decisions with individuals. From the 92 referrals, received since September 2014, 48 people have completed some form of ACP and there are early signs of improved communication and a collaborative approach. Discussion/conclusion Though nationally up to 90% of the public support ACP only 8% completed any form of ACP. Barriers include the availability of trained staff with the time, competence and confidence and understanding of the importance of ACP. The goal is that patients with frailty, dementia and chronic conditions are identified earlier to meet their individual choices. As these roles are solely dedicated to ACP the practitioners are immersed in the subject and therefore the impact may be greater.
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- 2015
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22. Equisetum hyemale
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R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, and R. Dale Thomas & Charles M. Allen
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Pteridophytes, http://name.umdl.umich.edu/IC-HERB00IC-X-1579653%5DMICH-V-1579653, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1579653/MICH-V-1579653/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1990
23. Marsilea vestita
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R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, and R. Dale Thomas & Charles M. Allen
- Abstract
Pteridophytes, http://name.umdl.umich.edu/IC-HERB00IC-X-1432896%5DMICH-V-1432896, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1432896/MICH-V-1432896/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1990
24. Protein farnesyltransferase and protein prenylation in Plasmodium falciparum
- Author
-
Debopam Chakrabarti, Hetal Patel, Jennifer Barger, Charles M. Allen, Thiago Da Silva, Steve Paquette, and Shelley Patterson
- Subjects
Farnesyltransferase ,Plasmodium falciparum ,Protein Prenylation ,Protozoan Proteins ,Peptide ,Biochemistry ,Substrate Specificity ,chemistry.chemical_compound ,Antimalarials ,Geranylgeraniol ,Prenylation ,parasitic diseases ,Animals ,Farnesyltranstransferase ,Enzyme Inhibitors ,Molecular Biology ,chemistry.chemical_classification ,Alkyl and Aryl Transferases ,biology ,Cell Biology ,Farnesol ,biology.organism_classification ,Enzyme ,chemistry ,biology.protein ,Protein prenylation ,Diterpenes - Abstract
Comparison of the malaria parasite and mammalian protein prenyltransferases and their cellular substrates is important for establishing this enzyme as a target for developing antimalarial agents. Nineteen heptapeptides differing only in their carboxyl-terminal amino acid were tested as alternative substrates of partially purified Plasmodium falciparum protein farnesyltransferase. Only NRSCAIM and NRSCAIQ serve as substrates, with NRSCAIM being the best. Peptidomimetics, FTI-276 and GGTI-287, inhibit the transferase with IC(50) values of 1 and 32 nm, respectively. Incubation of P. falciparum-infected erythrocytes with [(3)H]farnesol labels 50- and 22-28-kDa proteins, whereas [(3)H]geranylgeraniol labels only 22-28-kDa proteins. The 50-kDa protein is shown to be farnesylated, whereas the 22-28-kDa proteins are geranylgeranylated, irrespective of the labeling prenol. Protein labeling is inhibited more than 50% by either 5 microm FTI-277 or GGTI-298. The same concentration of inhibitors also inhibits parasite growth from the ring stage by 50%, decreases expression of prenylated proteins as measured with prenyl-specific antibody, and inhibits parasite differentiation beyond the trophozoite stage. Furthermore, differentiation specific prenylation of P. falciparum proteins is demonstrated. Protein labeling is detected predominantly during the trophozoite to schizont and schizont to ring transitions. These results demonstrate unique properties of protein prenylation in P. falciparum: a limited specificity of the farnesyltransferase for peptide substrates compared with mammalian enzymes, the ability to use farnesol to label both farnesyl and geranylgeranyl moieties on proteins, differentiation specific protein prenylation, and the ability of peptidomimetic prenyltransferase inhibitors to block parasite differentiation.
- Published
- 2002
25. Modification of Rab5 with a photoactivatable analog of geranylgeranyl diphosphate
- Author
-
Charles M. Allen, George J. Quellhorst, and Marianne Wessling-Resnick
- Subjects
Immunoprecipitation ,Photochemistry ,Ultraviolet Rays ,Protein Prenylation ,Disuccinimidyl suberate ,Photoaffinity Labels ,environment and public health ,Biochemistry ,chemistry.chemical_compound ,Prenylation ,Reticulocyte ,medicine ,Animals ,Molecular Biology ,rab5 GTP-Binding Proteins ,fungi ,Membrane Proteins ,Cell Biology ,Diazonium Compounds ,enzymes and coenzymes (carbohydrates) ,medicine.anatomical_structure ,chemistry ,Membrane protein ,Protein prenylation ,Electrophoresis, Polyacrylamide Gel ,Rab ,Rabbits ,biological phenomena, cell phenomena, and immunity - Abstract
A photoprobe analog of geranylgeranyl diphosphate (2-diazo-3,3,3-trifluoropropionyloxy-farnesyl diphosphate or DATFP-FPP) inhibits mevalonate-dependent prenylation of in vitro translated Rab5 in rabbit reticulocyte lysate, suggesting that it competes for lipid binding to the Rab geranylgeranyl transferase. Modification of Rab5 with DATFP-FPP, demonstrated by gel mobility shift and Triton X-114 phase separation experiments, confirms that the enzyme uses the analog as a substrate. The sedimentation of DATFP-modified Rab5 as a larger mass complex on sucrose density gradients indicates that it binds to other factors in rabbit reticulocyte lysate. Most importantly, DATFP-Rab5 cross-links to these soluble factors upon exposure to UV light. Immunoprecipitation with antibodies raised against proteins known to interact with Rab5 reveals that the cross-linked complexes contain Rab escort protein and GDI-1. DATFP-Rab5 also associates with membranes in a guanosine-5'-O-(3-thiotriphosphate)-stimulated manner. However, although prenylated Rab5 can be cross-linked to two unknown membrane-associated factors by the chemical cross-linker disuccinimidyl suberate, these proteins fail to be UV cross-linked to membrane-bound DATFP-Rab5. These results strongly suggest that membrane-associated factors bind Rab5 through protein-protein interactions rather than protein-prenyl interactions. The modification of Rab5 with DATFP-FPP establishes a novel photoaffinity technique for the characterization of prenyl-binding sites.
- Published
- 2001
26. Estrogen stimulates intracellular traffic in the liver of Rana esculenta complex by modifying Rab protein content
- Author
-
Charles M. Allen, Anna Trentalance, S. Cicuzza, L. Di Croce, and Giovannella Bruscalupi
- Subjects
Biophysics ,Protein Prenylation ,Small G Protein ,Lipid-anchored protein ,Biochemistry ,Vitellogenin ,GTP-binding protein regulators ,Prenylation ,GTP-Binding Proteins ,Animals ,Molecular Biology ,rab5 GTP-Binding Proteins ,biology ,rab4 GTP-Binding Proteins ,Rab2 GTP-Binding Protein ,Rana esculenta ,Estrogens ,Cell Biology ,Endocytosis ,rab2 GTP-Binding Protein ,Liver ,rab GTP-Binding Proteins ,biology.protein ,lipids (amino acids, peptides, and proteins) ,Female ,Rab ,Vitellogenesis - Abstract
During vitellogenesis in oviparous animals, estrogens induce the synthesis of the yolk precursor vitellogenin, a lipophosphoprotein rich in cholesterol. Estrogens also induce the activity of 3-hydroxy-3-methylglutaryl CoA reductase, that is necessary for the lipidation of vitellogenin. This increased enzyme activity could also be important for the production of isoprenoid groups that post-translationally modify proteins such as the Rab proteins, which are small G proteins involved in intracellular traffic. The effect of estrogens on the production of prenylated proteins and on the levels of Rab proteins in the liver of Rana esculenta complex has been studied. An increase of the Rabs specifically involved in the exocytic pathway was observed and is probably related to the need for export of massive amounts of newly synthesized vitellogenin.
- Published
- 1998
27. Dolichol biosynthesis in human malignant cells
- Author
-
Peter W. Stacpoole, A Henry, and Charles M. Allen
- Subjects
Carcinoma, Hepatocellular ,Lymphocyte ,Mevalonic Acid ,Mevalonic acid ,Biology ,Biochemistry ,chemistry.chemical_compound ,Tissue culture ,Dolichol ,Labelling ,Acute lymphocytic leukemia ,Dolichols ,medicine ,Tumor Cells, Cultured ,Humans ,Lymphocytes ,Molecular Biology ,Chromatography, High Pressure Liquid ,Cell Line, Transformed ,Leukemia ,Cholesterol ,Liver Neoplasms ,Cell Biology ,medicine.disease ,medicine.anatomical_structure ,chemistry ,Leukocytes, Mononuclear ,lipids (amino acids, peptides, and proteins) ,Flux (metabolism) ,Research Article - Abstract
Cholesterol, ubiquinone and dolichol biosynthesis from mevalonic acid was measured in non-malignant and malignant cultured human lymphocytes, freshly isolated human mononuclear leucocytes and in cultured human hepatoma cells. The relative flux of mevalonate into ubiquinone, dilichol and cholesterol was not significantly different between malignant and non-malignant cells, although the extent of labelling of each product was an order of magnitude greater in the malignant cultured cells. The most prominent dolichol isolated from total cellular lipid and synthesized in short-term labelling of cultured leukaemic cells had a chain length one isoprene unit shorter than that observed in normal human cells. Cultured human hepatoma cells and mononuclear leucocytes isolated from the peripheral blood of individuals with lymphoblastic and myelogenic leukaemia similarly synthesized shorter-chain dolichols. The dolichols made in cultured non-tumorigenic cells, freshly isolated mononuclear leucocytes from a normal individual or a patient with non-haematological malignancy had normal chain length.
- Published
- 1991
28. Movements and Habitat Use of Subadult Alligator Snapping Turtles (Macroclemys temminckii) in Louisiana
- Author
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J. Brent Harrel, Charles M. Allen, and Steve J. Hebert
- Subjects
biology ,Home range ,Alligator ,Alligator snapping turtle ,biology.organism_classification ,Taxodium ,law.invention ,Fishery ,Habitat ,Water temperature ,law ,biology.animal ,Macrochelys ,Turtle (robot) ,Ecology, Evolution, Behavior and Systematics - Abstract
We conducted a telemetry study of subadult alligator snapping turtles (Macroclemys temminckiz) to investigate movement and habitat use. Available habitat consisted of baldcypress forest (Taxodium distichum) (69.1%) and open channel (30.9%). Twelve (three male, nine female) turtles from Bayou Desiard in northeast Louisiana were each equipped with an ATS external radio transmitter and returned to the capture location within 2 h. A total of 1327 location fixes were recorded from March 1992 toJune 1993. At each fix location the date, time, water temperature and depth, direction from last fix and capture site, and nearest shoreline, and habitat were recorded. Significant differences were noted between male and female mean fix distance (males = 352.2 m, females = 160.3 m), mean percentage of movement fixes (males = 62.7%, females = 42.7%) and mean home range length (males = 3495.1 m, females = 1423.2 m). The percentage of movement fixes and fix distance was highly correlated with water temperature but not with the size of the turtle. Turtles preferred the baldcypress forest to open channel. Males and females had significant differences in microhabitat use; 56.1% of male fixes were associated with structures (e.g., logs) compared to 79.7% for females. Turtles returned to specific microsites and there were no overland movements. Subadult and adult alligator snapping turtles in Bayou Desiard have similar movement patterns and habitat use.
- Published
- 1996
- Full Text
- View/download PDF
29. Didymoglossum petersii
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Pteridophytes, http://name.umdl.umich.edu/IC-HERB00IC-X-1574519%5DMICH-V-1574519, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1574519/MICH-V-1574519/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1975
30. Polypogon monspeliensis
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1422864%5DMICH-V-1422864, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1422864/MICH-V-1422864/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1987
31. Carex flaccosperma
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1370362%5DMICH-V-1370362, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1370362/MICH-V-1370362/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1988
32. Carex festucacea
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1370016%5DMICH-V-1370016, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1370016/MICH-V-1370016/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1976
33. Eleocharis tuberculosa
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1398733%5DMICH-V-1398733, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1398733/MICH-V-1398733/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1979
34. Cyperus strigosus
- Author
-
Charles M. Allen, Charles M. Allen, Charles M. Allen, and Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1394627%5DMICH-V-1394627, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1394627/MICH-V-1394627/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1979
35. Bulbostylis capillaris
- Author
-
R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, and R. Dale Thomas, Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1562362%5DMICH-V-1562362, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1562362/MICH-V-1562362/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1981
36. Croton michauxii var. elliptica
- Author
-
R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, R. Dale Thomas, Charles M. Allen, and R. Dale Thomas, Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1543449%5DMICH-V-1543449, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1543449/MICH-V-1543449/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 1974
37. Persicaria maculosa
- Author
-
R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, and R. Dale Thomas & Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1439177%5DMICH-V-1439177, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1439177/MICH-V-1439177/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
38. Persicaria maculosa
- Author
-
R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, R. Dale Thomas & Charles M. Allen, and R. Dale Thomas & Charles M. Allen
- Abstract
Angiosperms, http://name.umdl.umich.edu/IC-HERB00IC-X-1439177%5DMICH-V-1439177, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/1439177/MICH-V-1439177/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
39. Extraction and detergent/lipid activation of dolichol kinase
- Author
-
Charles M. Allen, Janine D. Muth, and Nancy Gildersleeve
- Subjects
Cations, Divalent ,Octoxynol ,Cytidine Triphosphate ,Detergents ,Biophysics ,Phospholipid ,Stimulation ,Biochemistry ,Polyethylene Glycols ,Gel permeation chromatography ,Enzyme activator ,chemistry.chemical_compound ,Endocrinology ,Animals ,Centrifugation ,Dolichol kinase ,chemistry.chemical_classification ,Chromatography ,Chemistry ,Kinase ,Phosphotransferases ,Kinetics ,Phosphotransferases (Alcohol Group Acceptor) ,Enzyme ,Microsomes, Liver ,Cattle ,Deoxycholic Acid - Abstract
The CTP-dependent dolichol kinase from bovine liver microsonies was optimally extracted using either 0.5% sodium deoxycholate or 0.5% Triton X-100 containing 0.5 M NH4Cl. All activity was found in the supernatant fraction following high-speed centrifugation. This fraction was depleted of phospholipid (phospholipid remaining, less than 5% of total) by gel chromatography of the 0.5% deoxycholate extract. This partially purified enzyme was maximally activated 9- or 53-fold over controls in the presence of 0.1% deoxycholate or 0.1% Triton X-100, respectively. Stimulation of the kinase was also observed with mixtures of dimyristoylphosphatidylcholine and deoxycholate. The level of stimulation by these mixtures was up to 20-fold higher than that observed in controls having deoxycholate alone. Dimyristoylphosphatidylcholine alone was not stimulatory. A 1:1 molar ratio of Triton X-100 or deoxycholate to dimyristoylphosphatidylcholine was optimal for enzyme activation. The half-maximum velocity of the dephospholipidated enzyme at 1:1 molar ratio of detergent to dimyristoylphosphatidylcholine was obtained at 150 or 550 μM CTP in the presence of deoxycholate or Triton X-100, respectively. It has been observed, therefore, that dolichol kinase may be extracted from liver microsomes, depleted of endogenous phospholipids and activated by specific molar ratios of detergent to phospholipid.
- Published
- 1982
- Full Text
- View/download PDF
40. Changes in dehydrodolichyl diphosphate synthase during spermatogenesis in the rat
- Author
-
Zhong Chen, Charles M. Allen, and Carol Morris
- Subjects
Male ,Octoxynol ,Biophysics ,Testicle ,Biochemistry ,Polyethylene Glycols ,chemistry.chemical_compound ,Biosynthesis ,Transferases ,Testis ,medicine ,Animals ,Spermatogenesis ,Molecular Biology ,Dolichol Phosphates ,chemistry.chemical_classification ,Alkyl and Aryl Transferases ,Membranes ,ATP synthase ,biology ,Age Factors ,Seminiferous Tubules ,Rats ,Dehydrodolichyl diphosphate synthase ,medicine.anatomical_structure ,Enzyme ,Solubility ,chemistry ,biology.protein ,Dehydrodolichyl diphosphate synthase activity ,Specific activity - Abstract
The levels of dolichyl phosphate and 2,3-dehydrodolichyl diphosphate synthase were determined in seminiferous tubules of prepuberal rats to assess any changes occurring during early stages of spermatogenesis. Dolichyl phosphate increased in concentration two- to threefold from Day 10 to Day 23 after birth. A method was optimized to measure dehydrodolichyl diphosphate synthesis from Δ3-[14C]isopentenyl diphosphate and t,t-farnesyl diphosphate in homogenates of seminiferous tubules. Both dehydrodolichyl mono- and diphosphates were observed as products of the in vitro assay. The specific activity of tubular synthase increased twofold between Day 7 and Day 23 and decreased similarly between Day 23 and Day 60. Since there was a parallel increase in the concentration of tubular dolichyl phosphate and dehydrodolichyl diphosphate synthase activity during early stages of spermatogenesis, it is proposed that the level of dolichyl phosphate may be controlled at least in part by the regulation of de novo dehydrodolichyl diphosphate biosynthesis. The synthase was also solubilized from tubular membranes with deoxycholate and partially purified by chromatography.
- Published
- 1988
- Full Text
- View/download PDF
41. Photoaffinity labeling of undecaprenyl pyrophosphate synthetase with a farnesyl pyrophosphate analogue
- Author
-
Charles M. Allen, J Muth, and T Baba
- Subjects
chemistry.chemical_classification ,Photoaffinity labeling ,biology ,Geranyl pyrophosphate ,Farnesyl pyrophosphate ,Isopentenyl pyrophosphate ,Cell Biology ,Biochemistry ,Pyrophosphate ,Cofactor ,Divalent ,chemistry.chemical_compound ,chemistry ,biology.protein ,Binding site ,Molecular Biology - Abstract
The prenyl transferase undecaprenyl pyrophosphate synthetase was partially purified from the cytosolic fraction of Escherichia coli. Its enzymic products were characterized as a family of cis-polyprenyl phosphates, which ranged in carbon number from C55 to C25. The enzyme is constituted of two subunits of approximately 30,000 molecular weight. A radiolabeled photolabile analogue of t,t-farnesyl pyrophosphate, [3H]2-diazo-3-trifluoropropionyloxy geranyl pyrophosphate, was shown to label Lactobacillus plantarum and E. coli undecaprenyl pyrophosphate synthetase on UV irradiation in the presence of isopentenyl pyrophosphate and divalent cation. The only labeled polypeptide migrated on electrophoresis in a sodium dodecyl sulfate-polyacrylamide gel at a molecular weight of approximately 30,000. No protein was radiolabeled when the natural substrate, t,t-farnesyl pyrophosphate was included in the irradiation mixture. Irradiation in the presence of MgCl2 without isopentenyl pyrophosphate gave less labeling of the polypeptide. Irradiation with only isopentenyl pyrophosphate gave little labeling of the polypeptide. When the enzyme was irradiated with 3H-photoprobe, [14C]isopentenyl pyrophosphate, and MgCl2, the labeled polypeptide gave a ratio of 14C/3H that indicated the product must also bind to the enzyme on irradiation. These results demonstrate the ability to radiolabel the allylic pyrophosphate binding site and possibly product binding site of undecaprenyl pyrophosphate synthetase by a process which is favored when both cosubstrate and divalent cation are present.
- Published
- 1985
- Full Text
- View/download PDF
42. Dehydrodolichyl diphosphate synthetase from rat seminiferous tubules
- Author
-
Tsuneo Baba, Charles M. Allen, and Carol Morris
- Subjects
Male ,Cations, Divalent ,Stereochemistry ,Phosphatase ,Biophysics ,Biochemistry ,Catalysis ,Divalent ,chemistry.chemical_compound ,Hydrolysis ,Polyisoprenyl Phosphates ,Biosynthesis ,Transferases ,Testis ,Animals ,Petroleum ether ,Cytosolic fraction ,Molecular Biology ,Dolichol Phosphates ,chemistry.chemical_classification ,Alkyl and Aryl Transferases ,Membranes ,Seminiferous Tubules ,Farnesol ,Rats ,Enzyme ,chemistry - Abstract
Homogenates of seminiferous tubules from rat testes catalyzed the incorporation of label from [14C]isopentenyl diphosphate into a variety of polyprenyl products. Long chain polyprenyl mono- and diphosphates were formed as major products when undesirable side reactions were minimized. The long chain polyprenyl diphosphate synthetase was measured as a sum of the mono- and diphosphate derivatives formed and was dependent on the addition of t,t-farnesyl diphosphate, isopentenyl diphosphate, and divalent cation. The highest activity was associated with the membranous fractions, whereas activity was negligible in the cytosolic fraction. The products of this prenyl transferase were labile to acid and yielded petroleum ether soluble products which indicated that the α-isoprene unit was unsaturated. Hydrolysis of either the polyprenyl mono-or diphosphates with a testicular phosphatase in the absence of NaF yielded C75, C80, C85, and C90 polyprenols. The chain lengths of the products of the synthetase suggest that this enzyme is responsible for the de novo biosynthesis of dehydrodolichyl diphosphates which are precursors of the dolichyl derivatives found in testes.
- Published
- 1987
- Full Text
- View/download PDF
43. Lipid activation of undecaprenyl pyrophosphate synthetase from Lactobacillus plantarum
- Author
-
Janine D. Muth and Charles M. Allen
- Subjects
Alkyl and Aryl Transferases ,biology ,Terpenes ,Chemistry ,Detergents ,Fatty Acids ,Temperature ,Drug Synergism ,biology.organism_classification ,Lipids ,Biochemistry ,Drug synergism ,Microbiology ,Enzyme Activation ,Terpene ,Lactobacillus ,Structure-Activity Relationship ,Enzyme activator ,Transferases ,Structure–activity relationship ,Phospholipids ,Lactobacillus plantarum ,Undecaprenyl pyrophosphate synthetase - Published
- 1977
- Full Text
- View/download PDF
44. Inactivation of undecaprenyl pyrophosphate synthetase with a photolabile analog of farnesyl pyrophosphate
- Author
-
Tsuneo Baba and Charles M. Allen
- Subjects
chemistry.chemical_classification ,chemistry.chemical_compound ,Enzyme ,chemistry ,Biochemistry ,biology ,Farnesyl pyrophosphate ,Lactobacillaceae ,biology.organism_classification ,Bacteria ,Lactobacillus plantarum ,Undecaprenyl pyrophosphate synthetase - Published
- 1984
- Full Text
- View/download PDF
45. Lactobacillus plantarum undecaprenyl pyrophosphate synthetase: Purification and reaction requirements
- Author
-
Charles M. Allen, Jonathan Sack, and Michael V. Keenan
- Subjects
Time Factors ,Cations, Divalent ,Stereochemistry ,Detergents ,Biophysics ,Isopentenyl pyrophosphate ,Farnesyl pyrophosphate ,In Vitro Techniques ,Biochemistry ,Pyrophosphate ,Dimethylallyl pyrophosphate ,Cofactor ,chemistry.chemical_compound ,Hydrolysis ,Transferases ,Molecular Biology ,Phospholipids ,Isoprene ,Chromatography ,Alkyl and Aryl Transferases ,biology ,Terpenes ,Geranyl pyrophosphate ,Temperature ,Stereoisomerism ,Hydrogen-Ion Concentration ,Diphosphates ,Molecular Weight ,Lactobacillus ,chemistry ,biology.protein - Abstract
Undecaprenyl pyrophosphate synthetase was partially purified from Lactobacillus plantarum by DEAE-cellulose, hydroxyapatite, and Sephadex G-100 chromatography in Triton X-100. The enzyme has a molecular weight between 53,000 and 60,000. The enzyme demonstrated a fivefold preference for farnesyl pyrophosphate rather than geranyl pyrophosphate as the allylic cosubstrate, whereas dimethylallyl pyrophosphate was not effective as a substrate. Polyprenyl pyrophosphates obtained using either farnesyl or geranyl pyrophosphate as cosubstrate were chromatographically identical. Hydrolysis of these polyprenyl pyrophosphates with either a yeast or liver phosphatase preparation yielded undecaprenol as the major product. Incorporation of radioactive label from mixtures of Δ 3 -[1- 14 C]isopentenyl pyrophosphate and Δ 3 -2R-[2- 3 H]isopentenyl pyrophosphate into enzymic product indicated that each isoprene unit added to the allylic pyrophosphate substrate has a cis configuration about the newly formed double bond. The removal of detergent from enzyme solutions resulted in a parallel loss in enzyme activity when analyzed with either farnesyl or geranyl pyrophosphate as cosubstrates. Enzymic activity was restored on addition of Triton X-100 or deoxycholate. The enzyme exhibited a pH-activity profile with optima at pH 7.5 and 10.2. It also demonstrated a divalent cation requirement, with Mg 2+ , Mn 2+ , Zn 2+ , and Co 2+ exhibiting comparable activities.
- Published
- 1976
- Full Text
- View/download PDF
46. Variable product specificity of solanesyl pyrophosphate synthetase
- Author
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Hiroshi Fujii, Hiroshi Sagami, Tsuneo Baba, Kyozo Ogura, Shuichi Seto, Tanetoshi Koyama, and Charles M. Allen
- Subjects
Stereochemistry ,Kinetics ,Biophysics ,chemistry.chemical_element ,Micrococcus ,Biochemistry ,Medicinal chemistry ,High-performance liquid chromatography ,Pyrophosphate ,Terpene ,Metal ,chemistry.chemical_compound ,Polyisoprenyl Phosphates ,Transferases ,Magnesium ,Molecular Biology ,Alkyl and Aryl Transferases ,biology ,Terpenes ,Cell Biology ,biology.organism_classification ,chemistry ,visual_art ,visual_art.visual_art_medium ,Micrococcus luteus - Abstract
The distribution of polyprenyl pyrophosphates synthesized by the action of solanesyl pyrophosphate synthetase from Micrococcus luteus is dramatically changed depending on the Mg++ concentration. When the metal ion concentration is higher than 5 mM, octaprenyl and solanesyl (nonaprenyl) pyrophosphate are synthesized predominantly. On the other hand, when the metal ion level is lower than 0.5 mM, a variety of polyprenyl pyrophosphates ranging in carbon chain length from C15 to C40 are formed. Heptaprenyl pyrophosphate is the longest of the products formed at 0.1 mM of Mg++.
- Published
- 1980
- Full Text
- View/download PDF
47. Dehydrodolichyl diphosphate synthase in Sertoli and spermatogenic cells of prepuberal rats
- Author
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Charles M. Allen, Lynn J. Romrell, and Zhong Chen
- Subjects
endocrine system ,medicine.medical_specialty ,Spermatogenic Cell ,ATP synthase ,urogenital system ,Cellular differentiation ,Cell Biology ,Biology ,Testicle ,Sertoli cell ,Biochemistry ,Dehydrodolichyl diphosphate synthase ,Andrology ,medicine.anatomical_structure ,Endocrinology ,Internal medicine ,medicine ,biology.protein ,Specific activity ,Molecular Biology ,Spermatogenesis - Abstract
The specific activity of 2,3-dehydrodolichyl diphosphate synthase in homogenates of protease-treated seminiferous tubules, enriched spermatogenic cells, and Sertoli cells changed as a function of the age of prepuberal rats. The highest enzymatic activity occurred in each case in 23-day-old rats. Homogenates of pachytene spermatocytes, spermatids, or Sertoli cells had higher synthase activity than a whole testicular homogenate prepared by protease treatment of tubules. Enzymatic activity in pachytene spermatocytes expressed per mg of protein was about 1.7-fold higher than in spermatids, 5.3-fold higher than in spermatogonia, and about 8.3-fold higher than in spermatozoa. Therefore, the increase in spermatogenic cell synthase before day 23 can be accounted for by the appearance of the pachytene spermatocytes. Enzymatic activity decreased remarkably after the differentiation of spermatids into spermatozoa. Synthase activity in enriched Sertoli cell preparations was 1.5-2.3-fold higher than in spermatogenic cell preparations between days 15 and 30. Therefore, both spermatogenic cells and Sertoli cells contribute to changes in the enzymatic activity in seminiferous tubules during development. These changes may be important in regulating the availability of dolichyl phosphate for glycoprotein synthesis during early stages of differentiation.
- Published
- 1989
- Full Text
- View/download PDF
48. Undecaprenyl pyrophosphate synthetase from Lactobacillus plantarum: A dimeric protein
- Author
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Janine D. Muth and Charles M. Allen
- Subjects
Gel electrophoresis ,chemistry.chemical_classification ,Phenylglyoxal ,Alkyl and Aryl Transferases ,Chromatography ,Chemical Phenomena ,Isoelectric focusing ,Biophysics ,Isopentenyl pyrophosphate ,Arginine ,Chromatography, Agarose ,Biochemistry ,Pyrophosphate ,Molecular Weight ,Chemistry ,Lactobacillus ,chemistry.chemical_compound ,Column chromatography ,Enzyme ,chemistry ,Transferases ,Isoelectric Focusing ,Molecular Biology ,Isoprene - Abstract
a++Undecaprenyl pyrophosphate synthetase has been purified from Lactobacillus plantarum. It catalyzes the formation of a C55 polyprenyl pyrophosphate having isoprene residues with cis stereochemistry. The enzyme was shown to be an acidic protein (pI = 5.1), which can be partially purified by preparative gel electrophoresis and Blue-agarose column chromatography. The Km's of the enzyme for its substrates t,t-farnesyl pyrophosphate and isopentenyl pyrophosphate were determined to be 0.13 and 1.92 microM, respectively. The molecular weight of the enzyme was estimated by molecular sieve chromatography and gradient centrifugation to be 56,000 +/- 4000. Analysis by sodium dodecyl sulfate-polyacrylamide gel electrophoresis indicated that the protein was composed of a dimer of 30,000-Da subunits. The enzyme was inactivated by the arginine-specific reagents phenylglyoxal, butanedione and, cyclohexanedione, but this inactivation was not prevented by either of the substrates.
- Published
- 1984
- Full Text
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49. Some Contributions of N. Y. A. to Public Education
- Author
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Charles M. Allen
- Subjects
Education reform ,Higher education ,business.industry ,Vocational education ,Political science ,Public sector ,Social consciousness ,Education policy ,Public relations ,Public administration ,Comparative education ,business ,Education economics - Abstract
N THE current discussion of the relations between the public schools and the National Youth Administration, so much emphasis is being laid on the question of conflicting interests that the sole consideration could almost be indicated by the question: Who shall be privileged to do this or that fraction of the work now being done by the N.Y.A? When such a question furnishes the basis for discussion, there is a probability that neither of the organizations involved will wish to profit from the experience of the other and that much experience of value may consequently be lost. The purpose of this discussion is to shift the emphasis from the jurisdictional dispute and to point out a few of the possible contributions of the experiences of the National Youth Administration to the public schools. There is no intention of minimizing the large contribution that the schools have made to the work of the National Youth Administration. The expansion of social consciousness among school people, with an accompanying increase in emphasis on the guidance function, and the marked improvement in vocational offerings in schools are examples of school progress without which the operations of the N.Y.A. would have been impossible. The aim here, however, is to point out possible contributions in the other direction-contributions which the experience of the N.Y.A. may make to the philosophy and practice of the schools.
- Published
- 1942
- Full Text
- View/download PDF
50. Biosynthesis of echinulin. Isoprenylation of cyclo-L-alanyl-L-tryptophanyl
- Author
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Charles M. Allen
- Subjects
Carbon Isotopes ,Alanine ,Cell-Free System ,Chemical Phenomena ,Terpenes ,Ultraviolet Rays ,Chemistry ,Stereochemistry ,Tryptophan ,Dipeptides ,Tritium ,Biochemistry ,Mass Spectrometry ,Allyl Compounds ,chemistry.chemical_compound ,Aspergillus ,Prenylation ,Biosynthesis ,Ammonium Sulfate ,Spectrophotometry ,Phosphoric Acids ,Chromatography, Thin Layer - Published
- 1972
- Full Text
- View/download PDF
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