1. Identification of Siglec Ligands Using a Proximity Labeling Method
- Author
-
Albert Ventura, Penk-Yeir Low, Chin-Ju Tang, Yu-Ju Chen, Chan-Yo Fan, Chun-Cheng Lin, Yi-Hsiu Chen, Takashi Angata, Lan-Yi Chang, and Yi-Ju Chen
- Subjects
0301 basic medicine ,Glycan ,Free Radicals ,Sialic Acid Binding Ig-like Lectin 2 ,Biotin ,Tyramine ,Biology ,Ligands ,Sialidase ,Proteomics ,Biochemistry ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Lectins ,Animals ,Humans ,Sialic Acid Binding Immunoglobulin-like Lectins ,B-Lymphocytes ,Staining and Labeling ,CD22 ,Pattern recognition receptor ,SIGLEC ,Lectin ,Hydrogen Peroxide ,General Chemistry ,respiratory system ,Sialic acid ,RAW 264.7 Cells ,030104 developmental biology ,Immunoglobulin M ,chemistry ,Immune System ,030220 oncology & carcinogenesis ,biology.protein ,Leukocyte Common Antigens - Abstract
Siglecs are a family of receptor-type glycan recognition proteins (lectins) involved in self-nonself discrimination by the immune system. Identification of Siglec ligands is necessary to understand how Siglec-ligand interaction translates into biological outcomes. However, this is challenging because the interaction is weak. To facilitate identification of Siglec ligands, we adopted a proximity labeling method based on the tyramide radicalization principle. Cells that express Siglec ligands were labeled with Siglec-peroxidase complexes and incubated with biotin tyramide and hydrogen peroxide to generate short-lived tyramide radicals that covalently label the proteins near the Siglec-peroxidase complex. A proof-of-principle experiment using CD22 (Siglec-2) probe identified its known ligands on B cells, including CD22 itself, CD45, and IgM, among others, demonstrating the validity of this method. The specificity of labeling was confirmed by sialidase treatment of target cells and using glycan recognition-deficient mutant CD22 probes. Moreover, possible interactions between biotin-labeled proteins were revealed by literature-based protein-protein interaction network analysis, implying the presence of a molecular cluster comprising CD22 ligands. Further application of this method identified CD44 as a hitherto unknown Siglec-15 ligand on RAW264.7-derived osteoclasts. These results demonstrated the utility of proximity labeling for the identification of Siglec ligands, which may extend to other lectins.
- Published
- 2017