215 results on '"Chamberlain, Amanda J"'
Search Results
2. Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance
3. Allele-specific binding variants causing ChIP-seq peak height of histone modification are not enriched in expression QTL annotations
4. Genome-wide association and expression quantitative trait loci in cattle reveals common genes regulating mammalian fertility
5. Using expression data to fine map QTL associated with fertility in dairy cattle
6. A common regulatory haplotype doubles lactoferrin concentration in milk
7. Ancestral alleles defined for 70 million cattle variants using a population-based likelihood ratio test
8. Allele specific binding of histone modifications and a transcription factor does not predict allele specific expression in correlated ChIP-seq peak-exon pairs
9. The Bovine Pangenome Consortium: democratizing production and accessibility of genome assemblies for global cattle breeds and other bovine species
10. Correction: In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants
11. In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants
12. Gene expression and RNA splicing explain large proportions of the heritability for complex traits in cattle
13. A multi-tissue atlas of regulatory variants in cattle
14. Recovery of mitogenomes from whole genome sequences to infer maternal diversity in 1883 modern taurine and indicine cattle
15. Correction to: Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle
16. Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
17. Mitochondrial protein gene expression and the oxidative phosphorylation pathway associated with feed efficiency and energy balance in dairy cattle
18. Mitochondrial sequence variants: testing imputation accuracy and their association with dairy cattle milk traits.
19. eQTL-Detect: nextflow-based pipeline for eQTL detection in modular format with sharable and parallelizable scripts.
20. Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits
21. Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits
22. Mutant alleles differentially shape fitness and other complex traits in cattle
23. Evolution of tissue and developmental specificity of transcription start sites in Bos taurus indicus
24. Genome-wide fine-mapping identifies pleiotropic and functional variants that predict many traits across global cattle populations
25. Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle
26. Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals
27. Accuracy of imputation to whole-genome sequence in sheep
28. Survey of allele specific expression in bovine muscle
29. Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle
30. Fine-mapping sequence mutations with a major effect on oligosaccharide content in bovine milk
31. Additional file 4 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
32. Additional file 2 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
33. Additional file 3 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
34. Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits
35. Comparing allele specific expression and local expression quantitative trait loci and the influence of gene expression on complex trait variation in cattle
36. Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues
37. Targeted imputation of sequence variants and gene expression profiling identifies twelve candidate genes associated with lactation volume, composition and calving interval in dairy cattle
38. Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap
39. Corrigendum: Putative Causal Variants Are Enriched in Annotated Functional Regions From Six Bovine Tissues
40. Additional file 2 of Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits
41. Additional file 4 of Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits
42. Putative Causal Variants Are Enriched in Annotated Functional Regions From Six Bovine Tissues
43. Bayesian genome-wide analysis of cattle traits using variants with functional and evolutionary significance
44. Mutant alleles differentially shape cattle complex traits and fitness
45. A comprehensive catalogue of regulatory variants in the cattle transcriptome
46. Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle
47. Bayesian genome-wide analysis of cattle traits using variants with functional and evolutionary significance.
48. Genome-wide profiling of microRNAs and prediction of mRNA targets in 17 bovine tissues
49. Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits
50. Genome variants associated with RNA splicing variation in bovine are extensively shared between tissues
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