100 results on '"Carrai M"'
Search Results
2. Feline parvovirus seroprevalence is high in cats from disease outbreak and non‐outbreak regions in Australia
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Jenkins, E.L., Davis, C., Carrai, M., Ward, M., O'Keeffe, S., van Boeijen, M., Beveridge, L., Desario, C., Buonavoglia, C., Beatty, J., Decaro, N., Barrs, V., Jenkins, E.L., Davis, C., Carrai, M., Ward, M., O'Keeffe, S., van Boeijen, M., Beveridge, L., Desario, C., Buonavoglia, C., Beatty, J., Decaro, N., and Barrs, V.
- Abstract
Multiple, epizootic outbreaks of feline panleukopenia (FPL) caused by feline parvovirus (FPV) were recorded in shelter‐housed and owned cats in eastern Australia between 2014 and 2018. Most affected cats were unvaccinated. We hypothesized that low population immunity was a major driver of re‐emergent FPL. The aim of this study was to (i) determine the prevalence and predictors of seroprotective titers to FPV among shelter‐housed and owned cats, and (ii) compare the prevalence of seroprotection between a region affected by FPL outbreaks (Sydney, eastern Australia), and a region with no recent history of FPL outbreaks (Perth, western Australia). FPV antibodies were detected by hemagglutination inhibition assay on sera from 523 cats and titers ≥1:40 were considered protective. Socioeconomic indices based on postcode and Australian Bureau of Statistics census data were included in the risk factor analysis. The overall prevalence of protective FPV antibody titers was 94.3% and was similar between cats from outbreak (94.3%) and non‐outbreak regions (94.2%). On multivariable logistic regression analysis vaccinated cats were 29.94 times more likely to have protective FPV titers than cats not known to be vaccinated. Cats from postcodes of relatively less socioeconomic disadvantage were 5.93 times more likely to have protective FPV titers. The predictors identified for FPV seroprotective titers indicate that support targeted vaccination strategies in regions of socioeconomic disadvantage would be beneficial to increase population immunity. The critical level of vaccine coverage required to prevent FPL outbreaks should be determined to support initiatives to prevent the reemergence of this frequently fatal disease.
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- 2020
3. Feline parvovirus seroprevalence is high in domestic cats from disease outbreak and non-outbreak regions in Australia
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Jenkins, E., Davis, C., Carrai, M., Ward, M.P., O'Keeffe, S., van Boeijen, M., Beveridge, L., Desario, C., Buonavoglia, C., Beatty, J.A., Decaro, N., Barrs, V.R., Jenkins, E., Davis, C., Carrai, M., Ward, M.P., O'Keeffe, S., van Boeijen, M., Beveridge, L., Desario, C., Buonavoglia, C., Beatty, J.A., Decaro, N., and Barrs, V.R.
- Abstract
Multiple, epizootic outbreaks of feline panleukopenia (FPL) caused by feline parvovirus (FPV) occurred in eastern Australia between 2014 and 2018. Most affected cats were unvaccinated. We hypothesised that low population immunity was a major driver of re-emergent FPL. The aim of this study was to (i) determine the prevalence and predictors of seroprotective titres to FPV among shelter-housed and owned cats, and (ii) compare the prevalence of seroprotection between a region affected and unaffected by FPL outbreaks. FPV antibodies were detected by haemagglutination inhibition assay on sera from 523 cats and titres ≥1:40 were considered protective. Socioeconomic indices based on postcode and census data were included in the risk factor analysis. The prevalence of protective FPV antibody titres was high overall (94.3%), even though only 42% of cats were known to be vaccinated, and was not significantly different between outbreak and non-outbreak regions. On multivariable logistic regression analysis vaccinated cats were 29.94 times more likely to have protective FPV titres than cats not known to be vaccinated. Cats from postcodes of relatively less socioeconomic disadvantage were 5.93 times more likely to have protective FPV titres. The predictors identified for FPV seroprotective titres indicate targeted vaccination strategies in regions of socioeconomic disadvantage would be beneficial to increase population immunity. The critical level of vaccine coverage required to halt FPV transmission and prevent FPL outbreaks should be determined.
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- 2020
4. Radio-frequency thermal ablation of liver metastases with a cooled-tip electrode needle: results of a pilot clinical trial
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Lencioni, R., Goletti, O., Armillotta, N., Paolicchi, A., Moretti, M., Cioni, D., Donati, F., Cicorelli, A., Ricci, S., Carrai, M., Conte, P. F., Cavina, E., and Bartolozzi, C.
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- 1998
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5. Modulation of hemostatic balance with antithrombin III replacement therapy in a case of liver cirrhosis associated with recurrent venous thrombosis
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Carmassi, F., Morale, M., De Negri, F., and Carrai, M.
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- 1995
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6. Corrigendum: Global diversity in the TAS2R38 bitter taste receptor: Revisiting a classic evolutionary PROPosal (Scientific Reports (2016) 6 (25506) DOI: 10.1038/srep25506)
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Risso D. S., Mezzavilla M., Pagani L., Robino A., Morini G., Tofanelli S., Carrai M., Campa D., Barale R., Caradonna F., Gasparini P., Luiselli D., Wooding S., Drayna D., Risso, D. S., Mezzavilla, M., Pagani, L., Robino, A., Morini, G., Tofanelli, S., Carrai, M., Campa, D., Barale, R., Caradonna, F., Gasparini, P., Luiselli, D., Wooding, S., and Drayna, D.
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Corrigendum - Abstract
N/A
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- 2016
7. Association between taste receptor (TAS) genes and the perception of wine characteristics.
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Carrai, M., Campa, D., Vodicka, P., Flamini, Riccardo, Martelli, I., Slyskova, J., Jiraskova, K., Rejhova, A., Vodenkova, S., Canzian, F., Bertelli, A., DALLA VEDOVA, A., Bavaresco, Luigi, Vodickova, L., Barale, R., FLAMINI R., BAVARESCO L. (ORCID:0000-0002-1278-6587), Carrai, M., Campa, D., Vodicka, P., Flamini, Riccardo, Martelli, I., Slyskova, J., Jiraskova, K., Rejhova, A., Vodenkova, S., Canzian, F., Bertelli, A., DALLA VEDOVA, A., Bavaresco, Luigi, Vodickova, L., Barale, R., FLAMINI R., and BAVARESCO L. (ORCID:0000-0002-1278-6587)
- Abstract
Several studies have suggested a possible relationship between polymorphic variants of the taste receptors genes and the acceptance, liking and intake of food and beverages. In the last decade investigators have attempted to link the individual ability to taste 6-n-propylthiouracil (PROP) and the sensations, such as astringency and bitterness, elicited by wine or its components, but with contradictory results. We have used the genotype instead of the phenotype (responsiveness to PROP or other tastants), to test the possible relation between genetic variability and the perception of wine characteristic in 528 subjects from Italy and the Czech Republic. We observed several interesting associations, among which the association between several TAS2R38 gene single nucleotide polymorphisms (P = 0.002) and the TAS2R16-rs6466849 polymorphism with wine sourness P = 0.0003). These associations were consistent in both populations, even though the country of origin was an important factor in the two models, thus indicating therefore that genetics alongside cultural factors also play a significant role in the individual liking of wine.
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- 2017
8. Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal (vol 6, 25506, 2016)
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Risso, Ds, Mezzavilla, M, Pagani, Luca, Robino, A, Morini, G, Tofanelli, S, Carrai, M, Campa, D, Barale, R, Caradonna, F, Gasparini, P, Luiselli, D, Wooding, S, and Drayna, D.
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- 2016
9. SNP variation in the bitter taste TAS2R38 gene evaluated in student populations of several italian universities and isolates
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CARRAI M, CARADONNA, Fabio, CATANZARO, Irene, SCIANDRELLO, Giulia, BARALE R., CARRAI M, CARADONNA F, CATANZARO I, SCIANDRELLO G, and BARALE R
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TAS2R38, genetic variability ,Settore BIO/18 - Genetica - Abstract
People vary widely in their sensitivities to bitter compounds, but the all intercorrelation of these sensitivities is unknown. The study of genetic influences on bitter taste perception originated from the discovery in the 1930s that some individuals had taste to phenylthiocarbamide(PTC), whereas others found it extremely bitter. Subsequently, many studies were carried out on PTC and the structurally related compound propylthiouracil (PROP) to assess this viability and to determine the root causes. Initial family studies strongly suggested that PTC no tasting was due to a recessive allele in a single gene and heritability was estimated at 0,5. 55-85% of variation in PTC detection. The PTC gene, TAS2R38 on chromosome 7, consists of a small, single coding exon 1002 bp. The non-tester allele differs from the tester one for three single nucleotide polymorphisms (SNPs) at position 49, 262 and 296 in the gene, determining two predominant haplotypes. The phenotypic assay to differentiate taster from non-taster is relatively easy and quick, as well as the genotyping of the known polymorphisms. Therefore, this phenotypic-genotypic assay results to be particularly suitable for molecular and population genetic studies on large populations and for teaching genetics at university and high school level by allowing students to assess the genotype-phenotype relationship on themselves. By providing students with paper samples soaked in different solutions of PTC and PROP it was been possible to assess the individual threshold of bitterness sensitivity. DNA was extracted from saliva by means of Qiagen Kit mini, and following PCR amplification, polymorphisms were evaluated by gel electrophoresis. We started to develop this assay involving hundreds of students of several Italian universities such as Caltanissetta, Palermo, Catania, Cosenza in the South of Italy, Pisa and Parma in the Centrum of Italy with the aim to describe the Italian population for this polymorphism. By considering the large number of samples, we expect to be able to assess the frequency of additional rare polymorphisms, possibly further characterizing defined populations. A detailed questionnaire concerning life style and diet was also administered to students for possible association studies with the genetic polymorphism. Moreover, investigations on isolated populations such as these leaving in mountains of Garfagnana (Lucca) was undertaken. The distribution frequency of TAS2R38 polymorphisms in different sub sets of Italian population and isolates, the possible relationship with food preferences and other life styles, such as alcohol drinking and smoking will be reported and discussed. Functional expression studies demonstrate that five different haplotypes from the hTAS2R38 gene, code for operatively distinct receptors. The responses of the three haplotypes we also tested in vivo correlate strongly with individuals' psychophysical bitter sensitivities to a family of compounds. These data provide a direct molecular link between heritable variability in bitter taste perception to functional that contain the N-C= moiety. The molecular mechanisms of perceived bitterness variability have therapeutic implications, such as helping patients to consume beneficial bitter-tasting compounds, for example, pharmaceuticals and selected phytochemicals (Bufe 2005). Our goal is to investigate correlations as a function of individual sensitivities to several bitter compounds representative of different chemical classes and, from these correlations, infer the number and variety of potential bitterness transduction system.
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- 2007
10. Variability in bitter taste perception and correlation with SNP in TAS2R38 gene in different student population
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CARRAI M, CARADONNA, Fabio, BOTTARI F., CARRAI M, CARADONNA F, and BOTTARI F
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Bitter taste genetics - Abstract
People vary widely in their sensitivities to bitter compounds. The PTC gene, TAS2R38 on chromosome 7, consists a single coding exon which encodes a G-protein-coupled receptor. The taster subject contains a proline at position 49, an alanine at position 262. and a valine at position 296 (PAV form), while the no taster contains an alanine, a valine, and an isoleucine at these 3 positions, respectively (AVI form).These two forms depend on three single nucleotide polymorphisms (SNP). By providing students with paper soaked in different solutions of PTC it was been possible to assess the individual threshold of bitterness sensitivity. DNA was extracted from saliva, and following PCR amplification, SNP were evaluated by gel electrophoresis. A questionnaire about life style and diet was also administered to students for possible association studies with the genetic polymorphism. Our goal is to investigate correlations as a function of individual sensitivities to several bitter compounds representative of different chemical classes and than infer the number and variety of potential bitterness transduction system.
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- 2007
11. Plasma protein binding of alpidem in healthy volunteers, in neonates and in liver or renal insufficiency
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Pacifici, G. M., Bianchetti, G., Viani, A., Rizzo, G., Carrai, M., Allen, J., and Morselli, P. L.
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- 1989
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12. Genetic variability and bitter taste perception in italian student populations
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Carrai, M, Campa, D, Federico, Concetta, Saccone, Salvatore, Motta, S, Canzian, F, and Barale, R.
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- 2008
13. Variability of homocysteinemia in different populations
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Rossi, L, Lucchetti, A, Palla, P, De Marco, S, Carrai, M, Paci, A, Matteucci, Elena, Giampietro, Ottavio, and Innocenti, B.
- Published
- 2002
14. Disappearance of skin lipofuscin storage and marked clinical improvement in adult onset coeliac disease and severe vitamin E deficiency after chronic vitamin E megatherapy
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Battisti, C., Dotti, M. T., Formichi, P., Ubaldo Bonuccelli, Malandrini, A., Carrai, M., Tripodi, S. A., and Federico, A.
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Male ,Celiac Disease ,Cerebellar Ataxia ,Brain Diseases, Metabolic ,Humans ,Vitamin E ,Vitamin E Deficiency ,Neuromuscular Diseases ,Middle Aged ,Nervous System Diseases ,Lipofuscin ,Skin - Abstract
A case of adult onset coeliac disease with IgA and severe vitamin E deficiencies, associated with cerebellar impairment and peripheral neuropathy, is described. Nerve conduction velocities, BAERs and SEP were altered. Brain nMR showed cortical atrophy mainly in the frontal and parietal regions. At ultrastructural examination, nerve biopsy showed a severe nerve fiber loss with presence of lipofuscin. Lipofuscin has been also found in skin and muscle biopsy. Duodenal biopsy showed villar atrophy with criptae hypoplasia. IgA, Apo A1 lipoprotein and cholesterol were decreased. Serum level of vitamin E was not detectable and its amount did not increase after an oral loading (2 g bolus). Parenteral vitamin E administration (900 mg/day) was able to normalize the plasma values only after 6 months of chronic administration of the drug in coincidence with a significant improvement of clinical and neurophysiological signs, and disappearance of lipofuscin storage in the skin biopsy.
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- 1996
15. Treatment of large HCC: transcatheter arterial chemoembolization combined with percutaneous ethanol injection versus repeated transcatheter arterial chemoembolization.
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Bartolozzi, C, primary, Lencioni, R, additional, Caramella, D, additional, Vignali, C, additional, Cioni, R, additional, Mazzeo, S, additional, Carrai, M, additional, Maltinti, G, additional, Capria, A, additional, and Conte, P F, additional
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- 1995
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16. Oral doxifluridine in elderly patients with metastatic colorectal cancer: A multicenter phase II study
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Falcone, A., primary, Pfanner, E., additional, Ricci, S., additional, Bertuccelli, M., additional, Cianci, C., additional, Carrai, M., additional, De Marco, S., additional, Ceribelli, A., additional, Barduagni, M., additional, Calabresi, F., additional, Cornelia, G., additional, Sarcina, R., additional, Lorusso, V., additional, Stampino, C. Gallo, additional, Pandolfi, A., additional, Bruzzi, P., additional, and Conte, P.F., additional
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- 1994
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17. The effect of ageing on plasma albumin and plasma protein binding of diazepam, salicylic acid and digitoxin in healthy subjects and patients with renal impairment.
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Viani, A, primary, Rizzo, G, additional, Carrai, M, additional, and Pacifici, GM, additional
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- 1992
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18. Differential effect of aging on albumin and plasma protein binding of diazepam and salicylic acid in healthy subjects and renal patients.
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VIANI, A, primary, RIZZO, G, additional, CARRAI, M, additional, and PACIFICI, G, additional
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- 1992
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19. Conjugation pathways in liver disease.
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Pacifici, GM, primary, Viani, A, additional, Franchi, M, additional, Santerini, S, additional, Temellini, A, additional, Giuliani, L, additional, and Carrai, M, additional
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- 1990
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20. Plasma protein binding of frusemide in liver disease: effect of hypoalbuminaemia and hyperbilirubinaemia.
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Viani, A., Carrai, M., and Pacifici, GM
- Abstract
The binding of frusemide was studied in the plasma of 20 healthy subjects and 45 patients with liver disease. The unbound percentage (mean +/- s.d.) of frusemide was 1.64 +/- 0.21 healthy subjects) and 2.24 +/- 0.79 (patients) (P less than 0.01). By grouping the patients on the basis of plasma albuminaemia and bilirubinaemia four clusters namely: 'normal concentrations of albumin and bilirubin' (A), 'hyperbilirubinaemia and normal albumin concentration' (B), 'hypoalbuminaemia and normal bilirubin concentration' (C) and 'hypoalbuminaemia and hyperbilirubinaemia' (D) were defined. The unbound percentage of frusemide was 1.80 +/- 0.36 in (A); 2.44 +/- 1.05 in (B); 2.23 +/- 0.38 in (C); 2.76 +/- 0.77 in (D). The figure for healthy volunteers was not different from A, whereas it was significantly lower than those for B and D (P less than 0.01) and for C (P less than 0.05). A lowered binding of frusemide was associated with hypoalbuminaemia or hyperbilirubinaemia. [ABSTRACT FROM AUTHOR]
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- 1989
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21. Treatment of small hepatocellular carcinoma with percutaneous ethanol injection. Analysis of prognostic factors in 105 Western patients.
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Lencioni, Riccardo, Bartolozzi, Carlo, Caramella, Davide, Paolicchi, Alessandro, Carrai, Mario, Maltinti, Giacomo, Capria, Alfonso, Tafi, Alessandro, Conte, Pier Franco, Bevilacqua, Generoso, Lencioni, R, Bartolozzi, C, Caramella, D, Paolicchi, A, Carrai, M, Maltinti, G, Capria, A, Tafi, A, Conte, P F, and Bevilacqua, G
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- 1995
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22. Effect of aging and sex on the [^3H]-paroxetine binding to human platelets
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Marazziti, D., Rossi, A., Palego, L., Barsanti, A., Carrai, M., Giannaccini, G., Serra, P., Lucacchini, A., and Cassano, G. B.
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- 1998
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23. Bitter Taste Genetics and Food Preference in Italian Population
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Carrai, M., Campa, D., Concetta FEDERICO, Motta, S., Saccone, S., Canzian, F., and Barale, R.
24. Drug metabolism pathways in liver insufficiency
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Pacifici, G.M., primary, Viani, A., additional, Franchi, M., additional, Santerini, S., additional, Giuliani, L., additional, and Carrai, M., additional
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- 1988
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25. A gene-wide investigation on polymorphisms in the taste receptor 2R14 (TAS2R14) and susceptibility to colorectal cancer
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Novotny Jan, Vodickova Ludmila, Carrai Maura, Naccarati Alessio, Pardini Barbara, Vodicka Pavel, Campa Daniele, Hemminki Kari, Försti Asta, Barale Roberto, and Canzian Federico
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Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background Molecular sensing in the gastro-intestinal (GI) tract is responsible for the detection of ingested harmful drugs and toxins, thereby genetic polymorphisms affecting the capability of initiating these responses may be critical for the subsequent efficiency of the gut in eliminating possible threats to the organism. Although these fundamental control systems have been known for long time, the initial molecular recognition events that sense the chemical composition of the luminal contents of the GI tract have remained elusive. TAS2R14 is one of the better characterized members of the taste receptor family and has several polymorphic variants. Several substances that have been shown to activate TAS2R14 are powerful toxic and carcinogenic agents. Methods Using a tagging approach we investigated all the common genetic variation of the gene region in relation to colon cancer risk with a case-control study design. This is, at the best of our knowledge also the first report on the allele frequencies of the gene in the Caucasian population. Results We found no evidence of statistically significant associations between polymorphisms in the TAS2R14 gene and colon cancer risk. Conclusion In conclusion we can confidently exclude a major role for common polymorphisms of the TAS2R14 gene in colorectal cancer risk in this population, although in this report we had insufficient statistical power to completely exclude the possibility that rare variants of the TAS2R14 might be involved in colorectal cancer risk.
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- 2010
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26. Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal
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Massimo Mezzavilla, Roberto Barale, Gabriella Morini, Luca Pagani, Fabio Caradonna, Stephen Wooding, Daniele Campa, Davide Risso, Donata Luiselli, Antonietta Robino, Paolo Gasparini, Maura Carrai, Dennis Drayna, Sergio Tofanelli, Risso, D, Mezzavilla, M, Pagani, L, Robino, A, Morini, G, Tofanelli, S, Carrai, M, Campa, D, Barale, R, Caradonna, F, Gasparini, P, Luiselli, D, Wooding, S, Drayna, D., Risso, Davide S., Mezzavilla, Massimo, Pagani, Luca, Robino, Antonietta, Morini, Gabriella, Tofanelli, Sergio, Carrai, Maura, Campa, Daniele, Barale, Roberto, Caradonna, Fabio, Gasparini, Paolo, Luiselli, Donata, Wooding, Stephen, Drayna, Dennis, Risso, D., Mezzavilla, M., Pagani, L., Robino, A., Morini, G., Tofanelli, S., Carrai, M., Campa, D., Barale, R., Caradonna, F., Gasparini, P., Luiselli, D., and Wooding, S.
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AFRICA ,SELECTION ,0301 basic medicine ,Linkage disequilibrium ,Population ,Locus (genetics) ,Taste Genetics, Evolutionary genetics ,Biology ,Balancing selection ,Linkage Disequilibrium ,Article ,Receptors, G-Protein-Coupled ,Evolution, Molecular ,03 medical and health sciences ,0302 clinical medicine ,Databases, Genetic ,Genetic variation ,LOCUS ,Humans ,PHENYLTHIOCARBAMIDE ,Selection, Genetic ,education ,POPULATION ,VEGETABLES ,Genetics ,Genetic diversity ,education.field_of_study ,HUMAN GENETIC DIVERSITY ,SENSITIVITY ,PTC ,HUMANS ,Natural selection ,Multidisciplinary ,Genetic Variation ,phenylthiocarbamide (PTC) and 6-n-propylthiouracil (PROP)- TAS2R38 haplotypes-natural selection ,Phenylthiourea ,Corrigenda ,Settore BIO/18 - Genetica ,030104 developmental biology ,TAS2R38 ,Haplotypes ,Propylthiouracil ,Taste ,030217 neurology & neurosurgery - Abstract
The ability to taste phenylthiocarbamide (PTC) and 6-n-propylthiouracil (PROP) is a polymorphic trait mediated by the TAS2R38 bitter taste receptor gene. It has long been hypothesized that global genetic diversity at this locus evolved under pervasive pressures from balancing natural selection. However, recent high-resolution population genetic studies of TAS2Rs suggest that demographic events have played a critical role in the evolution of these genes. We here utilized the largest TAS2R38 database yet analyzed, consisting of 5,589 individuals from 105 populations, to examine natural selection, haplotype frequencies and linkage disequilibrium to estimate the effects of both selection and demography on contemporary patterns of variation at this locus. We found signs of an ancient balancing selection acting on this gene but no post Out-Of-Africa departures from neutrality, implying that the current observed patterns of variation can be predominantly explained by demographic, rather than selective events. In addition, we found signatures of ancient selective forces acting on different African TAS2R38 haplotypes. Collectively our results provide evidence for a relaxation of recent selective forces acting on this gene and a revised hypothesis for the origins of the present-day worldwide distribution of TAS2R38 haplotypes.
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- 2016
27. C. CIOCIOLA, L’impazienza di più lunghi conversari. Dal carteggio di Carlo Dionisotti con Gianfranco Contini, in Il mondo e la storia. Studi in onore di Claudia Villa, a cura di F. LO MONACO e L.C. ROSSI, Firenze, SISMEL-Edizioni del Galluzzo, 2014, pp. 179-185
- Author
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CIOCIOLA, CLAUDIO, G. ALBANESE, S. ASPERTI, C. BOLOGNA, V. VON BUREN, S. CARRAI, M. CENTANNI, P. CHIESA, C. CIOCIOLA, M. FERRARI, F. LO MONACO, M. PASSALACQUA, M. REEVE, M. REFOLIOSI, L.C. ROISSI, F. STELLA, F. LO MONACO, L.C. ROSSI, and Ciociola, Claudio
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FILOLOGIA ITALIANA, FILOLOGIA ROMANZA, STORIA DELLA FILOLOGIA, GIANFRANCO CONTINI, CARLO DIONISOTTI - Abstract
Presentazione e edizione di quattro lettere del carteggio tra Carlo Dionisotti e Gianfranco Contini, del quale l'autore sta preparando l'edizione integrale.
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- 2014
28. Bitter taste genetics and food preference in italian population
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Barale, Roberto, Carrai, Maura, Campa, Daniele, Caradonna, Fabio, Catanzaro, Irene, Canzian, Federico, Saccone, Salvatore, Concetta FEDERICO, Motta, Salvatore, Barale, R, Carrai, M, Canzian, F, Saccone, S, Concetta, F, Motta, S, Caradonna, F, Catanzaro, I, and Campa, D
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Settore BIO/18 - Genetica ,TAS2R38 gene, polymorphism. bitter taste, genetics ,TAS2R38 gene ,polymorphism ,bitter taste - Abstract
Objective: To investigate the possible role of the polymorphic bitter taste gene, TAS2R38, known to be involved in the perception of the bitter synthetic chemical phenylthiocarbamide (PTC), in influencing food preference and body mass index(BMI). Methods: up to now more than 1500 university students (17-25 years old) at Catania, Cosenza, Rome, Palermo, Pisa, Parma, Chieti, Trento University have been enrolled in the study. DNA was extracted from saliva, and genotyped by TaqMan assay for the most frequent polymorphism (PAV/AVI) of TAS2R38 gene. A possible association between genotype and food preference was assessed by administering a detailed questionnaire for food preferences and life style. Results: 1) the entire population was found to be in Hardy –Weimberg equilibrium. 2) No significant difference in allele frequencies between Centre and South Italy was observed, neither between the isolated population of Garfagnana and the rest of Italy. 3) A significant difference was observed considering rare aplotypes. 4) A good correlation (80%)between TAS2R38 polymorphism and capability to assess PTC bitterness was observed. 5) A suggestive, but non statistically significant correlation between BMI and genotype, particularly in male, (p=0.08) was obtained. 6) An indication that TAS2R38 polymorphism (genotype) is associated with the preference of some food such as: bitter chocolate (p=0.02), sprouts (0.09), onion (0.03), whipped cream(p=0.09) was obtained. 7) In addition, the indication that bitter PTC assessment capability (phenotype) can be associated with the preference or disliking of cabbage(p=0.015); bitter chocolate (p=0.10) sausages (p=0.05); garlic (p=0.08); onion(p=0.07); citrus fruits (0.08), strong cheese (p=0.06) was also obtained. Conclusions: we are aware that TAS2R38 is just one of the 25 (or more) human polymorphic gene involved in the perception of bitter taste or astringency of foods and that it appears to be particularly associated to PTC bitterness.
- Published
- 2010
29. RADIOTOXICOLOGICAL CONTROL IN THE MILITARY NUCLEAR CENTER (C.A.M.E.N.).
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Carrai, M
- Published
- 1965
30. Impact of transport conditions and underlying disease on post-stocking survival of juvenile Lates calcarifer.
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Chew XZ, Carrai M, Shen X, and Gibson-Kueh S
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- Animals, Iridoviridae physiology, Transportation, Perciformes, Aquaculture, Fish Diseases microbiology, Fish Diseases mortality, Fish Diseases virology
- Abstract
Diseases caused by pathogens commonly occurring in the aquatic environment or those that are non-host specific are prevalent and threaten the rapid growth of tropical aquaculture. This study investigates causes of mortality in 12 batches of newly stocked juvenile Lates calcarifer from three different hatcheries. Cytology based on Diff-Quik™-stained tissue and blood smears provides rapid diagnosis of possible causes of mortality, while histopathology and haematology provide a better understanding of how prolonged transport and fish with existing chronic disease are more likely to experience elevated mortality post-stocking. Our findings showed that accumulation of ammonia during prolonged transport causes extensive damage to epithelial barriers in gastrointestinal tracts and depressed immunity due to marked hypoglycaemia, predisposing fish to acute Streptococcosis. Lates calcarifer with chronic bacterial enteritis developed severe hypoglycaemia, had low circulating total plasma protein, and suffered high mortality within 24 hours post-stocking. Hypoglycaemia and low circulating blood proteins disrupt osmoregulation and exacerbate dehydration, which is fatal in fish in sea water. Dying L. calcarifer tested PCR positive for scale drop disease virus (SDDV) at 28 days post-stocking showed a 10-fold elevation of white blood cell counts, severe vasculitis, and obstruction of blood supply to major organs. Destruction of important immune organs such as spleen is a hallmark of SDDV infection that explains high incidences of opportunistic Vibrio harveyi infections in 61% of fish with SDDV. Overall, this study reiterates the importance of stocking disease-free fish and reducing transport stress., (© 2024 The Authors. Journal of Fish Diseases published by John Wiley & Sons Ltd.)
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- 2024
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31. Low Prevalence of SARS-CoV-2 Antibodies in Canine and Feline Serum Samples Collected during the COVID-19 Pandemic in Hong Kong and Korea.
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Go YY, Carrai M, Choi YR, Brackman CJ, Tam KWS, Law PYT, Woodhouse F, Gray J, Kim JH, Park J, Jeon CW, Jang H, Magouras I, Decaro N, Cheng SMS, Peiris M, Beatty JA, and Barrs VR
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- Cats, Humans, Animals, Dogs, SARS-CoV-2, Pandemics, Prevalence, Hong Kong epidemiology, Seroepidemiologic Studies, Antibodies, Viral, Republic of Korea epidemiology, COVID-19 epidemiology, COVID-19 veterinary, Cat Diseases epidemiology, Dog Diseases epidemiology
- Abstract
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has affected millions of people worldwide since its emergence in 2019. Knowing the potential capacity of the virus to adapt to other species, the serological surveillance of SARS-CoV-2 infection in susceptible animals is important. Hong Kong and Seoul are two of Asia's most densely populated urban cities, where companion animals often live in close contact with humans. Sera collected from 1040 cats and 855 dogs during the early phase of the pandemic in Hong Kong and Seoul were tested for SARS-CoV-2 antibodies using an ELISA that detects antibodies against the receptor binding domain of the viral spike protein. Positive sera were also tested for virus neutralizing antibodies using a surrogate virus neutralization (sVNT) and plaque reduction neutralization test (PRNT). Among feline sera, 4.51% and 2.54% of the samples from Korea and Hong Kong, respectively, tested ELISA positive. However, only 1.64% of the samples from Korea and 0.18% from Hong Kong tested positive by sVNT, while only 0.41% of samples from Korea tested positive by PRNT. Among canine samples, 4.94% and 6.46% from Korea and Hong Kong, respectively, tested positive by ELISA, while only 0.29% of sera from Korea were positive on sVNT and no canine sera tested positive by PRNT. These results confirm a low seroprevalence of SARS-CoV-2 exposure in companion animals in Korea and Hong Kong. The discordance between the RBD-ELISA and neutralization tests may indicate possible ELISA cross-reactivity with other coronaviruses, especially in canine sera.
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- 2023
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32. Domestic Cat Hepadnavirus: Molecular Epidemiology and Phylogeny in Cats in Hong Kong.
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Capozza P, Carrai M, Choi YR, Tu T, Nekouei O, Lanave G, Martella V, Beatty JA, and Barrs VR
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- Cats, Animals, Humans, Hong Kong epidemiology, Phylogeny, Molecular Epidemiology, Risk Factors, Hepadnaviridae genetics
- Abstract
Domestic cat hepadnavirus (DCH) is an emerging virus related to the hepatitis B virus (HBV). The pathogenic potential of DCH in cats remains to be established. The molecular prevalence of DCH varies widely in the regions investigated so far. The aim of this study was to determine the prevalence, load, and risk factors for DCH detection among cats in Hong Kong, and to generate molecular and epidemiological data on the DCH strains circulating in cats in Hong Kong. DCH DNA was detected using DCH-specific qPCR in 57/513 (11.1%) residual diagnostic blood samples from owned cats. The median viral load was 8.85 × 10
3 copies/mL of whole blood (range for the 5th to the 95th percentile, 3.33 × 103 to 2.2 × 105 copies per mL). Two outliers had higher viral loads of 1.88 × 107 copies/mL and 4.90 × 109 copies/mL. DCH was detected in cats from 3 months to 19 years of age. Sex, age, neuter status, breed, or elevated serum alanine aminotransferase were not statistically associated with DCH DNA detection. On phylogenetic analysis based on 12 complete genome sequences, the Hong Kong DCH viruses clustered in Genotype A with viruses from Australia and Asia (clade A1), distinct from viruses from Europe (clade A2). Sequence analysis found that DCH has similar epsilon and direct repeat regions to human HBV, suggesting a conserved method of replication. Based on our findings, the DCH strains circulating in Hong Kong are a continuum of the Asiatic strains.- Published
- 2023
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33. Faecal virome of the Australian grey-headed flying fox from urban/suburban environments contains novel coronaviruses, retroviruses and sapoviruses.
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Van Brussel K, Mahar JE, Ortiz-Baez AS, Carrai M, Spielman D, Boardman WSJ, Baker ML, Beatty JA, Geoghegan JL, Barrs VR, and Holmes EC
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- Animals, Humans, Retroviridae genetics, Virome, Australia, Mammals, Chiroptera, Sapovirus, Coronavirus
- Abstract
Bats are important reservoirs for viruses of public health and veterinary concern. Virus studies in Australian bats usually target the families Paramyxoviridae, Coronaviridae and Rhabdoviridae, with little known about their overall virome composition. We used metatranscriptomic sequencing to characterise the faecal virome of grey-headed flying foxes from three colonies in urban/suburban locations from two Australian states. We identified viruses from three mammalian-infecting (Coronaviridae, Caliciviridae, Retroviridae) and one possible mammalian-infecting (Birnaviridae) family. Of particular interest were a novel bat betacoronavirus (subgenus Nobecovirus) and a novel bat sapovirus (Caliciviridae), the first identified in Australian bats, as well as a potentially exogenous retrovirus. The novel betacoronavirus was detected in two sampling locations 1375 km apart and falls in a viral lineage likely with a long association with bats. This study highlights the utility of unbiased sequencing of faecal samples for identifying novel viruses and revealing broad-scale patterns of virus ecology and evolution., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2022
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34. The enteric virome of cats with feline panleukopenia differs in abundance and diversity from healthy cats.
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Van Brussel K, Wang X, Shi M, Carrai M, Feng S, Li J, Holmes EC, Beatty JA, and Barrs VR
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- Animals, Cats, Feline Panleukopenia Virus genetics, Mammals, Virome, Bocavirus genetics, Calicivirus, Feline, Cat Diseases, Feline Panleukopenia epidemiology, Parvoviridae, Viruses
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Feline panleukopenia (FPL) is a severe, often fatal disease caused by feline panleukopenia virus (FPV). How infection with FPV might impact the composition of the entire eukaryotic enteric virome in cats has not been characterized. We used meta-transcriptomic and viral particle enrichment metagenomic approaches to characterize the enteric viromes of 23 cats naturally infected with FPV (FPV-cases) and 36 age-matched healthy shelter cats (healthy controls). Sequencing reads from mammalian infecting viral families largely belonged to the Coronaviridae, Parvoviridae and Astroviridae. The most abundant viruses among the healthy control cats were feline coronavirus, Mamastrovirus 2 and Carnivore bocaparvovirus 3 (feline bocavirus), with frequent coinfections of all three. Feline chaphamaparvovirus was only detected in healthy controls (6 out of 36, 16.7%). Among the FPV-cases, in addition to FPV, the most abundant viruses were Mamastrovirus 2, feline coronavirus and C. bocaparvovirus 4 (feline bocaparvovirus 2). The latter and feline bocaparvovirus 3 were detected significantly more frequently in FPV-cases than in healthy controls. Feline calicivirus was present in a higher proportion of FPV-cases (11 out of 23, 47.8%) compared to healthy controls (5 out of 36, 13.9%, p = 0.0067). Feline kobuvirus infections were also common among FPV-cases (9 out of 23, 39.1%) and were not detected in any healthy controls (p < .0001). While abundant in both groups, astroviruses were more frequently present in FPV-cases (19 out of 23, 82.6%) than in healthy controls (18 out of 36, p = .0142). The differences in eukaryotic virome composition revealed here indicate that further investigations are warranted to determine associations between enteric viral co-infections on clinical disease severity in cats with FPL., (© 2022 The Authors. Transboundary and Emerging Diseases published by Wiley-VCH GmbH.)
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- 2022
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35. Hepadnavirus DNA Is Detected in Canine Blood Samples in Hong Kong but Not in Liver Biopsies of Chronic Hepatitis or Hepatocellular Carcinoma.
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Choi YR, Chen MC, Carrai M, Rizzo F, Chai Y, Tse M, Jackson K, Martella V, Steiner J, Pesavento PA, Beatty JA, and Barrs VR
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- Animals, Biopsy, Cats, DNA, Viral genetics, Dogs, Hepatitis B virus genetics, Hepatitis, Chronic, Hong Kong, Humans, Carcinoma, Hepatocellular veterinary, Hepadnaviridae genetics, Liver Neoplasms
- Abstract
Chronic hepatitis and hepatocellular carcinoma (HCC) caused by the hepadnavirus hepatitis B virus (HBV) are significant causes of human mortality. A hepatitis-B-like virus infecting cats, domestic cat hepadnavirus (DCH), was reported in 2018. DCH DNA is hepatotropic and detectable in feline blood or serum (3.2 to 12.3%). Detection of HBV DNA has been reported in sera from 10% of free-roaming dogs in Brazil, whereas 6.3% of sera from dogs in Italy tested positive for DCH DNA by real-time quantitative PCR (qPCR). If DCH, HBV, or another hepadnavirus is hepatotropic in dogs, a role for such a virus in the etiology of canine idiopathic chronic hepatitis (CH) or HCC warrants investigation. This study investigated whether DCH DNA could be detected via qPCR in blood from dogs in Hong Kong and also whether liver biopsies from dogs with confirmed idiopathic CH or HCC contained hepadnaviral DNA using two panhepadnavirus conventional PCRs (cPCR) and a DCH-specific cPCR. DCH DNA was amplified from 2 of 501 (0.4%) canine whole-blood DNA samples. A second sample taken 6 or 7 months later from each dog tested negative in DCH qPCR. DNA extracted from 101 liver biopsies from dogs in Hong Kong or the USA, diagnosed by board-certified pathologists as idiopathic CH ( n = 47) or HCC ( n = 54), tested negative for DCH DNA and also tested negative using panhepadnavirus cPCRs. This study confirms that DCH DNA can be detected in canine blood by qPCR, although at a much lower prevalence than that reported previously. We identified no evidence to support a pathogenic role for a hepadnavirus in canine idiopathic CH or HCC.
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- 2022
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36. Low Intrahost and Interhost Genetic Diversity of Carnivore Protoparvovirus 1 in Domestic Cats during a Feline Panleukopenia Outbreak.
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Wang X, Carrai M, Van Brussel K, Feng S, Beatty JA, Shi M, Holmes EC, Li J, and Barrs VR
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- Animals, Cats, Disease Outbreaks veterinary, Feline Panleukopenia Virus genetics, Mutation, Nucleotides, Feline Panleukopenia epidemiology, Parvoviridae Infections epidemiology, Parvoviridae Infections veterinary
- Abstract
Feline panleukopenia (FPL), a highly contagious and frequently fatal disease of cats, is caused by Feline parvovirus (FPV) and Canine parvovirus (CPV). We characterised the diversity of these Carnivore protoparvovirus 1 variants in 18 faecal samples collected from domestic cats with FPL during an outbreak, using targeted parvoviral DNA metagenomics to a mean depth of >10,000 × coverage per site. All samples comprised FPV alone. Compared with the reference FPV genome, isolated in 1967, 44 mutations were detected. Ten of these were nonsynonymous, including 9 in nonstructural genes and one in VP1/VP2 (Val232Ile), which was the only one to exhibit interhost diversity, being present in five sequences. There were five other polymorphic nucleotide positions, all with synonymous mutations. Intrahost diversity at all polymorphic positions was low, with subconsensus variant frequencies (SVF) of <1% except for two positions (2108 and 3208) in two samples with SVF of 1.1−1.3%. Intrahost nucleotide diversity was measured across the whole genome (0.7−1.5%) and for each gene and was highest in the NS2 gene of four samples (1.2−1.9%). Overall, intrahost viral genetic diversity was limited and most mutations observed were synonymous, indicative of a low background mutation rate and strong selective constraints.
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- 2022
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37. Feline Calicivirus Virulent Systemic Disease: Clinical Epidemiology, Analysis of Viral Isolates and In Vitro Efficacy of Novel Antivirals in Australian Outbreaks.
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Bordicchia M, Fumian TM, Van Brussel K, Russo AG, Carrai M, Le SJ, Pesavento PA, Holmes EC, Martella V, White P, Beatty JA, Shi M, and Barrs VR
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- Animals, Australia, Caliciviridae Infections pathology, Caliciviridae Infections veterinary, Caliciviridae Infections virology, Calicivirus, Feline classification, Calicivirus, Feline genetics, Capsid drug effects, Cat Diseases pathology, Cat Diseases virology, Cats, Cytidine analogs & derivatives, Cytidine therapeutic use, Female, Male, Metagenome, Nitro Compounds therapeutic use, Phylogeny, Thiazoles therapeutic use, Antiviral Agents therapeutic use, Calicivirus, Feline isolation & purification, Cat Diseases drug therapy, Cat Diseases epidemiology, Disease Outbreaks veterinary
- Abstract
Feline calicivirus (FCV) causes upper respiratory tract disease (URTD) and sporadic outbreaks of virulent systemic disease (FCV-VSD). The basis for the increased pathogenicity of FCV-VSD viruses is incompletely understood, and antivirals for FCV-VSD have yet to be developed. We investigated the clinicoepidemiology and viral features of three FCV-VSD outbreaks in Australia and evaluated the in vitro efficacy of nitazoxanide (NTZ), 2'-C-methylcytidine (2CMC) and NITD-008 against FCV-VSD viruses. Overall mortality among 23 cases of FCV-VSD was 39%. Metagenomic sequencing identified five genetically distinct FCV lineages within the three outbreaks, all seemingly evolving in situ in Australia. Notably, no mutations that clearly distinguished FCV-URTD from FCV-VSD phenotypes were identified. One FCV-URTD strain likely originated from a recombination event. Analysis of seven amino-acid residues from the hypervariable E region of the capsid in the cultured viruses did not support the contention that properties of these residues can reliably differentiate between the two pathotypes. On plaque reduction assays, dose-response inhibition of FCV-VSD was obtained with all antivirals at low micromolar concentrations; NTZ EC
50 , 0.4-0.6 µM, TI = 21; 2CMC EC50 , 2.7-5.3 µM, TI > 18; NITD-008, 0.5 to 0.9 µM, TI > 111. Investigation of these antivirals for the treatment of FCV-VSD is warranted.- Published
- 2021
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38. Canine parvovirus is shed infrequently by cats without diarrhoea in multi-cat environments.
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Carrai M, Decaro N, Van Brussel K, Dall'Ara P, Desario C, Fracasso M, Šlapeta J, Colombo E, Bo S, Beatty JA, Meers J, and Barrs VR
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- Animals, Capsid Proteins genetics, Cat Diseases pathology, Cat Diseases virology, Cats, Disease Reservoirs veterinary, Dog Diseases transmission, Dog Diseases virology, Dogs, Parvoviridae Infections transmission, Parvoviridae Infections virology, Parvovirus, Canine genetics, Real-Time Polymerase Chain Reaction, Dog Diseases epidemiology, Feces virology, Parvoviridae Infections veterinary, Parvovirus, Canine physiology, Virus Shedding physiology
- Abstract
Whether subclinical shedding of canine parvovirus (CPV) by cats might contribute to the epidemiology of canine CPV infections, particularly in facilities housing both cats and dogs, requires clarification. Conflicting results are reported to date. Using conventional PCR (cPCR) to amplify the VP2 gene, shedding of the CPV variants (CPV-2a, 2b, 2c) by healthy cats in multi-cat environments was reportedly common in Europe but rare in Australia. The aim of this study was to determine whether low-level faecal CPV shedding occurs in multi-cat environments in Australia and Italy using a TaqMan real-time PCR to detect Carnivore protoparvovirus 1 (CPV and feline parvovirus, FPV) DNA, and minor-groove binder probe real-time PCR assay to differentiate FPV and CPV types and to characterize CPV variants. In total, 741 non-diarrhoeic faecal samples from shelters in Australia (n = 263) and from shelters or cat colonies in Italy (n = 478) were tested. Overall, Carnivore protoparvovirus 1 DNA was detected in 49 of 741 (6.61 %) samples. Differentiation was possible for 31 positive samples. FPV was most common among positive samples (28/31, 90.3 %). CPV was detected in 4/31 samples (12.9 %) including CPV-2a in one sample, CPV-2b in another and co-infections of FPV/CPV-2b and CPV-2a/CPV-2b in the remaining two samples. A high rate of subclinical FPV infection was detected in one shelter during an outbreak of feline panleukopenia, during which 21 of 22 asymptomatic cats (95.5 %) sampled were shedding FPV. Faecal shedding of CPV by cats in multi-cat environments is uncommon suggesting that domestic cats are not significant reservoirs of CPV., (Copyright © 2021 Elsevier B.V. All rights reserved.)
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- 2021
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39. Dysbiosis of the Urinary Bladder Microbiome in Cats with Chronic Kidney Disease.
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Kim Y, Carrai M, Leung MHY, Chin J, Li J, Lee PKH, Beatty JA, Pfeiffer DU, and Barrs VR
- Abstract
Although feline urinary tract diseases cause high morbidity and mortality rates, and subclinical bacteriuria is not uncommon, the feline urinary microbiome has not been characterized. We conducted a case-control study to identify the feline urinary bladder microbiome and assess its association with chronic kidney disease (CKD), feline idiopathic cystitis (FIC), and positive urine cultures (PUCs). Of 108 feline urine samples subjected to 16S rRNA gene sequencing, 48 (44.4%) samples reached the 500-sequence rarefaction threshold and were selected for further analysis, suggesting that the feline bladder microbiome is typically sparse. Selected samples included 17 CKD, 9 FIC, 8 PUC cases and 14 controls. Among these, 19 phyla, 145 families, and 218 genera were identified. Proteobacteria were the most abundant, followed by Firmicutes . Notably, four major urotypes were identified, including two urotypes predominated by Escherichia -Shigella or Enterococcus and two others characterized by relatively high alpha diversity, Diverse 1 and Diverse 2. Urotype was associated with disease status ( P value of 0.040), with the Escherichia -Shigella -predominant urotype being present in 53% of CKD cases and in all of the Escherichia coli PUC cases. Reflecting these patterns, the overall microbial composition of CKD cases was more similar to that of E. coli PUC cases than to that of controls ( P value of <0.001). Finally, PUC cases had microbial compositions distinct from those of controls as well as CKD and FIC cases, with significantly lower Shannon diversity and Faith's phylogenetic diversity values. IMPORTANCE Despite the clinical importance of urinary diseases in cats, the presence of resident urine microbes has not been demonstrated in cats, and the role of these microbes as a community in urinary health remains unknown. Here, we have shown that cats with and without urinary tract disease harbor unique microbial communities in their urine. We found no evidence to suggest that the bladder microbiome is implicated in the pathogenesis of feline idiopathic cystitis, a disease similar to bladder pain syndrome/interstitial cystitis in humans. However, cats with chronic kidney disease had dysbiosis of their bladder microbiome, which was predominated by Escherichia -Shigella and had a community structure similar to that of cats with Escherichia coli cystitis. These findings suggest that chronic kidney disease alters the bladder environment to favor Escherichia -Shigella colonization, potentially increasing the risk of overt clinical infection.
- Published
- 2021
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40. Analysis of canine parvoviruses circulating in Australia reveals predominance of variant 2b and identifies feline parvovirus-like mutations in the capsid proteins.
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Kwan E, Carrai M, Lanave G, Hill J, Parry K, Kelman M, Meers J, Decaro N, Beatty JA, Martella V, and Barrs VR
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- Amino Acid Substitution, Animals, Antigenic Variation, Antigens, Viral genetics, Antigens, Viral immunology, Asia, Australia, Cats, Dogs, Enteritis veterinary, Enteritis virology, Evolution, Molecular, Feces virology, Feline Panleukopenia Virus genetics, Mutation, Parvoviridae Infections virology, Parvovirus, Canine classification, Parvovirus, Canine immunology, Phylogeny, Capsid Proteins genetics, Dog Diseases virology, Parvoviridae Infections veterinary, Parvovirus, Canine genetics
- Abstract
Canine parvovirus (CPV) is a major enteric pathogen of dogs worldwide that emerged in the late 1970s from a feline parvovirus (FPV)-like ancestral virus. Shortly after its emergence, variant CPVs acquired amino acid (aa) mutations in key capsid residues, associated with biological and/or antigenic changes. This study aimed to identify and analyse CPV variants and their capsid mutations amongst Australian dogs, to gain insights into the evolution of CPV in Australia and to investigate relationships between the disease and vaccination status of dogs from which viruses were detected. CPV VP2 sequences were amplified from 79 faecal samples collected from dogs with parvoviral enteritis at 20 veterinary practices in five Australian states. The median age at diagnosis was 4 months (range 1-96 months). Only 3.7% of dogs with vaccination histories had completed recommended vaccination schedules, while 49% were incompletely vaccinated and 47.2% were unvaccinated. For the first time, CPV-2b has emerged as the dominant antigenic CPV variant circulating in dogs with parvoviral enteritis in Australia, comprising 54.4% of viruses, while CPV-2a and CPV-2 comprised 43.1% and 2.5%, respectively. The antigenic variant CPV-2c was not identified. Analysis of translated VP2 sequences revealed a vast repertoire of amino acid (aa) mutations. Several Australian CPV strains displayed signatures in the VP2 protein typical of Asian CPVs, suggesting possible introduction of CPV strains from Asia, and/or CPV circulation between Asia and Australia. Canine parvoviruses were identified containing aa residues typical of FPV at key capsid (VP2) positions, representing reverse mutations or residual mutations retained from CPV-2 during adaptation from an FPV-like ancestor, suggesting that evolutionary intermediates between CPV-2 and FPV are circulating in the field. Similarly, intermediates between CPV-2a-like viruses and CPV-2 were also identified. These findings help inform a better understanding of the evolution of CPV in dogs., (© 2020 Blackwell Verlag GmbH.)
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- 2021
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41. Identification of Novel Astroviruses in the Gastrointestinal Tract of Domestic Cats.
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Brussel KV, Wang X, Shi M, Carrai M, Li J, Martella V, Beatty JA, Holmes EC, and Barrs VR
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- Animals, Animals, Domestic, Cats, Computational Biology methods, Genome, Viral, Genomics methods, Male, Mamastrovirus isolation & purification, Phylogeny, Recombination, Genetic, Sequence Analysis, DNA, Astroviridae Infections veterinary, Cat Diseases virology, Gastroenteritis veterinary, Mamastrovirus classification
- Abstract
Astroviruses, isolated from numerous avian and mammalian species including humans, are commonly associated with enteritis and encephalitis. Two astroviruses have previously been identified in cats, and while definitive evidence is lacking, an association with enteritis is suggested. Using metagenomic next-generation sequencing of viral nucleic acids from faecal samples, we identified two novel feline astroviruses termed Feline astrovirus 3 and 4. These viruses were isolated from healthy shelter-housed kittens (Feline astrovirus 3; 6448 bp) and from a kitten with diarrhoea that was co-infected with Feline parvovirus (Feline astrovirus 4, 6549 bp). Both novel astroviruses shared a genome arrangement of three open reading frames (ORFs) comparable to that of other astroviruses. Phylogenetic analysis of the concatenated ORFs, ORF1a, ORF1b and capsid protein revealed that both viruses were phylogenetically distinct from other feline astroviruses, although their precise evolutionary history could not be accurately determined due to a lack of resolution at key nodes. Large-scale molecular surveillance studies of healthy and diseased cats are needed to determine the pathogenicity of feline astroviruses as single virus infections or in co-infections with other enteric viruses.
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- 2020
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42. Phylogenetic and Geospatial Evidence of Canine Parvovirus Transmission between Wild Dogs and Domestic Dogs at the Urban Fringe in Australia.
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Kelman M, Harriott L, Carrai M, Kwan E, Ward MP, and Barrs VR
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- Animals, Animals, Domestic virology, Animals, Wild virology, Australia epidemiology, Base Sequence, Dog Diseases virology, Dogs, Enteritis veterinary, Enteritis virology, Female, Geography, Male, Parvoviridae Infections epidemiology, Parvoviridae Infections transmission, Parvovirus, Canine classification, Parvovirus, Canine isolation & purification, Sequence Analysis, DNA, Dog Diseases epidemiology, Dog Diseases transmission, Parvoviridae Infections veterinary, Parvovirus, Canine genetics, Parvovirus, Canine pathogenicity
- Abstract
Canine parvovirus (CPV) is an important cause of disease in domestic dogs. Sporadic cases and outbreaks occur across Australia and worldwide and are associated with high morbidity and mortality. Whether transmission of CPV occurs between owned dogs and populations of wild dogs, including Canis familiaris , Canis lupus dingo and hybrids, is not known. To investigate the role of wild dogs in CPV epidemiology in Australia, PCR was used to detect CPV DNA in tissue from wild dogs culled in the peri-urban regions of two Australian states, between August 2012 and May 2015. CPV DNA was detected in 4.7% (8/170). There was a strong geospatial association between wild-dog CPV infections and domestic-dog CPV cases reported to a national disease surveillance system between 2009 and 2015. Postcodes in which wild dogs tested positive for CPV were 8.63 times more likely to also have domestic-dog cases reported than postcodes in which wild dogs tested negative ( p = 0.0332). Phylogenetic analysis of CPV VP2 sequences from wild dogs showed they were all CPV-2a variants characterized by a novel amino acid mutation (21-Ala) recently identified in CPV isolates from owned dogs in Australia with parvoviral enteritis. Wild-dog CPV VP2 sequences were compared to those from owned domestic dogs in Australia. For one domestic-dog case located approximately 10 km from a wild-dog capture location, and reported 3.5 years after the nearest wild dog was sampled, the virus was demonstrated to have a closely related common ancestor. This study provides phylogenetic and geospatial evidence of CPV transmission between wild and domestic dogs in Australia.
- Published
- 2020
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43. Feline Parvovirus Seroprevalence Is High in Domestic Cats from Disease Outbreak and Non-Outbreak Regions in Australia.
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Jenkins E, Davis C, Carrai M, Ward MP, O'Keeffe S, van Boeijen M, Beveridge L, Desario C, Buonavoglia C, Beatty JA, Decaro N, and Barrs VR
- Subjects
- Animals, Antibodies, Viral blood, Australia epidemiology, Cats, Feline Panleukopenia prevention & control, Feline Panleukopenia virology, Female, Male, Regression Analysis, Risk Factors, Seroepidemiologic Studies, Vaccination veterinary, Viral Vaccines, Disease Outbreaks prevention & control, Feline Panleukopenia epidemiology, Feline Panleukopenia immunology, Feline Panleukopenia Virus immunology
- Abstract
Multiple, epizootic outbreaks of feline panleukopenia (FPL) caused by feline parvovirus(FPV) occurred in eastern Australia between 2014 and 2018. Most affected cats were unvaccinated.We hypothesised that low population immunity was a major driver of re-emergent FPL. The aim ofthis study was to (i) determine the prevalence and predictors of seroprotective titres to FPV amongshelter-housed and owned cats, and (ii) compare the prevalence of seroprotection between a regionaffected and unaffected by FPL outbreaks. FPV antibodies were detected by haemagglutinationinhibition assay on sera from 523 cats and titres ≥1:40 were considered protective. Socioeconomicindices based on postcode and census data were included in the risk factor analysis. The prevalenceof protective FPV antibody titres was high overall (94.3%), even though only 42% of cats wereknown to be vaccinated, and was not significantly different between outbreak and non-outbreakregions. On multivariable logistic regression analysis vaccinated cats were 29.94 times more likelyto have protective FPV titres than cats not known to be vaccinated. Cats from postcodes of relativelyless socioeconomic disadvantage were 5.93 times more likely to have protective FPV titres. Thepredictors identified for FPV seroprotective titres indicate targeted vaccination strategies in regionsof socioeconomic disadvantage would be beneficial to increase population immunity. The criticallevel of vaccine coverage required to halt FPV transmission and prevent FPL outbreaks should bedetermined.
- Published
- 2020
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44. Identification of A Novel Papillomavirus Associated with Squamous Cell Carcinoma in A Domestic Cat.
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Carrai M, Van Brussel K, Shi M, Li CX, Chang WS, Munday JS, Voss K, McLuckie A, Taylor D, Laws A, Holmes EC, Barrs VR, and Beatty JA
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- Animals, Cat Diseases diagnosis, Cat Diseases virology, Cats, DNA, Viral genetics, Genome, Viral, Male, Neoplasm Recurrence, Local virology, Papillomaviridae isolation & purification, Papillomaviridae pathogenicity, Papillomavirus Infections diagnosis, Phylogeny, Sequence Analysis, DNA, Skin pathology, Skin virology, Skin Neoplasms virology, Carcinoma, Squamous Cell veterinary, Carcinoma, Squamous Cell virology, Neoplasm Recurrence, Local veterinary, Papillomaviridae genetics, Papillomavirus Infections veterinary, Skin Neoplasms veterinary
- Abstract
Papillomaviruses infect the skin and mucosal surfaces of diverse animal hosts with consequences ranging from asymptomatic colonization to highly malignant epithelial cancers. Increasing evidence suggests a role for papillomaviruses in the most common cutaneous malignancy of domestic cats, squamous cell carcinoma (SCC). Using total DNA sequencing we identified a novel feline papillomavirus in a nasal biopsy taken from a cat presenting with both nasal cavity lymphoma and recurrent squamous cell carcinoma affecting the nasal planum. We designate this novel virus as Felis catus papillomavirus 6 (FcaPV6). The complete FcaPV6 7453 bp genome was similar to those of other feline papillomaviruses and phylogenetic analysis revealed that it was most closely related to FcaPV3, although was distinct enough to represent a new viral type. Classification of FcaPV6 in a new genus alongside FcaPVs 3, 4 and 5 is supported. Archived excisional biopsy of the SCC, taken 20 months prior to presentation, was intensely positive on p16 immunostaining. FcaPV6, amplified using virus-specific, but not consensus, PCR, was the only papillomavirus detected in DNA extracted from the SCC. Conversely, renal lymphoma, sampled at necropsy two months after presentation, tested negative on FcaPV6-specific PCR. In sum, using metagenomics we demonstrate the presence of a novel feline papillomavirus in association with cutaneous squamous cell carcinoma., Competing Interests: The authors declare no conflict of interest.
- Published
- 2020
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45. Distinct Lineages of Feline Parvovirus Associated with Epizootic Outbreaks in Australia, New Zealand and the United Arab Emirates.
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Van Brussel K, Carrai M, Lin C, Kelman M, Setyo L, Aberdein D, Brailey J, Lawler M, Maher S, Plaganyi I, Lewis E, Hawkswell A, Allison AB, Meers J, Martella V, Beatty JA, Holmes EC, Decaro N, and Barrs VR
- Subjects
- Animals, Australia epidemiology, Cats, DNA, Viral, Geography, Medical, New Zealand epidemiology, Retrospective Studies, Sequence Analysis, DNA, United Arab Emirates epidemiology, Viral Load, Disease Outbreaks, Feline Panleukopenia epidemiology, Feline Panleukopenia virology, Feline Panleukopenia Virus classification
- Abstract
Feline panleukopenia (FPL), a frequently fatal disease of cats, is caused by feline parvovirus (FPV) or canine parvovirus (CPV). We investigated simultaneous outbreaks of FPL between 2014 and 2018 in Australia, New Zealand and the United Arab Emirates (UAE) where FPL outbreaks had not been reported for several decades. Case data from 989 cats and clinical samples from additional 113 cats were obtained to determine the cause of the outbreaks and epidemiological factors involved. Most cats with FPL were shelter-housed, 9 to 10 weeks old at diagnosis, unvaccinated, had not completed a primary vaccination series or had received vaccinations noncompliant with current guidelines. Analysis of parvoviral VP2 sequence data confirmed that all FPL cases were caused by FPV and not CPV. Phylogenetic analysis revealed that each of these outbreaks was caused by a distinct FPV, with two virus lineages present in eastern Australia and virus movement between different geographical locations. Viruses from the UAE outbreak formed a lineage of unknown origin. FPV vaccine virus was detected in the New Zealand cases, highlighting the difficulty of distinguishing the co-incidental shedding of vaccine virus in vaccinated cats. Inadequate vaccination coverage in shelter-housed cats was a common factor in all outbreaks, likely precipitating the multiple re-emergence of infection events., Competing Interests: The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.
- Published
- 2019
- Full Text
- View/download PDF
46. Umbilical tissue as a sampling technique for DNA testing in neonate dogs.
- Author
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Carrai M and Wade CM
- Subjects
- Animals, DNA isolation & purification, Dogs genetics, Genotyping Techniques, Umbilical Cord
- Published
- 2018
- Full Text
- View/download PDF
47. Association of the bitter taste receptor gene TAS2R38 (polymorphism RS713598) with sensory responsiveness, food preferences, biochemical parameters and body-composition markers. A cross-sectional study in Italy.
- Author
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Perna S, Riva A, Nicosanti G, Carrai M, Barale R, Vigo B, Allegrini P, and Rondanelli M
- Subjects
- Absorptiometry, Photon, Adult, Amino Acid Substitution, Biomarkers blood, Body Mass Index, Cohort Studies, Cross-Sectional Studies, Female, Genetic Association Studies, Humans, Italy, Male, Middle Aged, Overweight blood, Overweight diagnostic imaging, Overweight metabolism, Prospective Studies, Receptors, G-Protein-Coupled metabolism, Young Adult, Adiposity, Food Preferences, Genetic Predisposition to Disease, Overweight genetics, Polymorphism, Single Nucleotide, Receptors, G-Protein-Coupled genetics, Taste Threshold
- Abstract
This study examined the relationship between TAS2R38 gene polymorphism (RS713598), G/G, C/G or C/C genotype, and sensory responsiveness, food preferences, biochemical parameters and body composition in a cross-sectional study in 118 adults (24 men and 94 women). The frequencies of C/C, G/G and C/G were respectively 20.3%, 29.7% and 50.0%. As regards taste responsiveness, subjects with G-allele had a higher perception threshold than the C/C genotype for 6-n-propyl-2-thiouracil (PROP) (p < .05), and caffeine (p < .05). The G-alleles had higher preferences for beer (OR: 6.25; p < .05), but lower for butter (OR: 0.64; p < .05) and cured meat (OR: 0.55; p < .05). Biochemical parameters and body composition markers did not differ between genotypes. Subjects with RS713598 polymorphism had a higher bitter taste perception threshold and higher or lower preferences for selected nutrient/energy dense foods, such as beer, butter and cured meat.
- Published
- 2018
- Full Text
- View/download PDF
48. Association between taste receptor (TAS) genes and the perception of wine characteristics.
- Author
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Carrai M, Campa D, Vodicka P, Flamini R, Martelli I, Slyskova J, Jiraskova K, Rejhova A, Vodenkova S, Canzian F, Bertelli A, Dalla Vedova A, Bavaresco L, Vodickova L, and Barale R
- Subjects
- Adult, Alleles, Czech Republic, Female, Gene Frequency, Genotype, Humans, Male, Middle Aged, Phenotype, Polymorphism, Single Nucleotide, Propylthiouracil, Taste, Genetic Association Studies, Taste Buds metabolism, Taste Perception genetics, Wine
- Abstract
Several studies have suggested a possible relationship between polymorphic variants of the taste receptors genes and the acceptance, liking and intake of food and beverages. In the last decade investigators have attempted to link the individual ability to taste 6-n-propylthiouracil (PROP) and the sensations, such as astringency and bitterness, elicited by wine or its components, but with contradictory results. We have used the genotype instead of the phenotype (responsiveness to PROP or other tastants), to test the possible relation between genetic variability and the perception of wine characteristic in 528 subjects from Italy and the Czech Republic. We observed several interesting associations, among which the association between several TAS2R38 gene single nucleotide polymorphisms (P = 0.002) and the TAS2R16-rs6466849 polymorphism with wine sourness P = 0.0003). These associations were consistent in both populations, even though the country of origin was an important factor in the two models, thus indicating therefore that genetics alongside cultural factors also play a significant role in the individual liking of wine.
- Published
- 2017
- Full Text
- View/download PDF
49. Corrigendum: Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal.
- Author
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Risso DS, Mezzavilla M, Pagani L, Robino A, Morini G, Tofanelli S, Carrai M, Campa D, Barale R, Caradonna F, Gasparini P, Luiselli D, Wooding S, and Drayna D
- Published
- 2016
- Full Text
- View/download PDF
50. Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal.
- Author
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Risso DS, Mezzavilla M, Pagani L, Robino A, Morini G, Tofanelli S, Carrai M, Campa D, Barale R, Caradonna F, Gasparini P, Luiselli D, Wooding S, and Drayna D
- Subjects
- Databases, Genetic, Genetic Variation, Haplotypes, Humans, Linkage Disequilibrium, Phenylthiourea chemistry, Propylthiouracil chemistry, Evolution, Molecular, Receptors, G-Protein-Coupled genetics, Selection, Genetic genetics, Taste genetics
- Abstract
The ability to taste phenylthiocarbamide (PTC) and 6-n-propylthiouracil (PROP) is a polymorphic trait mediated by the TAS2R38 bitter taste receptor gene. It has long been hypothesized that global genetic diversity at this locus evolved under pervasive pressures from balancing natural selection. However, recent high-resolution population genetic studies of TAS2Rs suggest that demographic events have played a critical role in the evolution of these genes. We here utilized the largest TAS2R38 database yet analyzed, consisting of 5,589 individuals from 105 populations, to examine natural selection, haplotype frequencies and linkage disequilibrium to estimate the effects of both selection and demography on contemporary patterns of variation at this locus. We found signs of an ancient balancing selection acting on this gene but no post Out-Of-Africa departures from neutrality, implying that the current observed patterns of variation can be predominantly explained by demographic, rather than selective events. In addition, we found signatures of ancient selective forces acting on different African TAS2R38 haplotypes. Collectively our results provide evidence for a relaxation of recent selective forces acting on this gene and a revised hypothesis for the origins of the present-day worldwide distribution of TAS2R38 haplotypes.
- Published
- 2016
- Full Text
- View/download PDF
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