1. The ion channels and transporters gene expression profile indicates a shift in excitability and metabolisms during malignant progression of Follicular Lymphoma
- Author
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Alberto Magi, Benedetta Puccini, Carla Breschi, Marika Masselli, Luigi Rigacci, Cesare Sala, Angela Guerriero, Pasquale Laise, Serena Pillozzi, Olivia Crociani, and Annarosa Arcangeli
- Subjects
0301 basic medicine ,Male ,Microarrays ,Follicular lymphoma ,lcsh:Medicine ,Ion Channels ,Article ,Cohort Studies ,03 medical and health sciences ,KCNN4 ,0302 clinical medicine ,Gene expression ,Databases, Genetic ,medicine ,Humans ,Gene Regulatory Networks ,lcsh:Science ,Lymphoma, Follicular ,Aged ,Regulation of gene expression ,Multidisciplinary ,biology ,B-cell lymphoma ,Gene Expression Profiling ,lcsh:R ,Glucose transporter ,Membrane Transport Proteins ,Middle Aged ,medicine.disease ,Gene expression profiling ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,biology.protein ,Cancer research ,Disease Progression ,gene expression profile ,GLUT1 ,lcsh:Q ,Female ,Lymphoma, Large B-Cell, Diffuse ,Diffuse large B-cell lymphoma ,030217 neurology & neurosurgery - Abstract
The definition of the gene expression profile of genes encoding Ion Channels and Transporters (ICT-GEP) represents a novel and attracting aspect in cancer. We determined the ICT-GEP of Follicular Lymphoma (FL), and compared it with that of the more aggressive Diffuse Large B Cell Lymphoma (DLBCL). cDNA microarray data were collected both from patients enrolled for this study, and from public datasets. In FL the ICT-GEP indicated the overexpression of both the K+ channel encoding gene KCNN4, and SLC2A1, which encodes the Glut1 glucose transporter. SLC2A1 turned out to represent the hub of a functional network, connecting channels and transporters in FL. Relapsed FL patients were characterised by 38 differentially expressed ICT genes, among which ATP9A, SLC2A1 and KCNN4 were under-expressed, indicating a down-regulation of both excitability and glycolysis. A completely different profile of K+ channel encoding genes emerged in DLBCL accompanied by the over-expression of the fatty acid transporter-encoding gene SLC27A1 as well as of the metabolism regulator NCoR1. This indicates a change in excitability and a shift towards an oxidative metabolism in DLBCL. Overall, the ICT-GEP may contribute to identifying novel lymphoma biomarkers related to excitability and metabolic pathways, with particular relevance for drug resistant, relapsed FL.
- Published
- 2016