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The adverse impacts of excessive soil nutrients on water quality and carbon sequestration have been recognized in tropical and temperate regions, with already widespread industrial farming and urbanization, but rarely in subarctic regions. However, recent studies have shown significant increases in porewater nitrogen (N) and phosphorus (P) concentrations in burned subarctic peatlands and downstream waters, which is a growing concern as climate change leads to increasing wildfires, permafrost thaws, and waterlogged peatlands. In this study, we present the results of a short-term incubation experiment conducted on soils from subarctic bogs and fens, aimed at evaluating the effects of high levels of nutrients on carbon gas production rates. We divided aliquots of the peatland soil samples into separate containers and added artificial porewater to each, enriching them with dissolved inorganic nitrogen (N), phosphorus (P), both, or none for controls. Overall, the fen samples showed higher carbon dioxide (CO2) and methane (CH4) production rates at 1, 5, 15, and 25 °C compared to the bog samples, which we attributed to differences in soil properties and initial microbial biomass. The bog sample with added N produced more CO2 compared to its control, while the fen sample with added P produced more CO2 compared to its control. It was unexpected that the addition of both N and P reduced CO2 but increased CH4 production in both soils compared to their controls. After a month, the pore water C, N, and P stochiometric ratios approached the initial soil microbial biomass ratios, suggesting microbial nutrient recycling in an inherently nutrient-poor soil environment. These preliminary results imply a complex response of carbon turnover in peatland soils to nutrient enrichment. [ABSTRACT FROM AUTHOR]

Atmospheric concentrations of nitrous oxide (N2O), a potent greenhouse gas that is also responsible for significant stratospheric ozone depletion, have increased in response to intensified use of agricultural fertilizers and other human activities that have accelerated nitrogen cycling processes. Microbial denitrification in soils and sediments is a major source of N2O, produced as an intermediate during the reduction of oxidized forms of nitrogen to dinitrogen gas (N2). Substrate availability (nitrate and organic matter) and environmental factors such as oxygen levels, temperature, moisture, and pH influence rates of denitrification and N2O production. Here we describe the role of physicochemical perturbation (defined here as a change from the ambient environmental conditions) on denitrification and N2O production. Changes in salinity, temperature, moisture, pH, and zinc in agricultural soils induced a short-term perturbation response characterized by lower rates of total denitrification and higher rates of net N2O production. The N2O to total denitrification ratio (N2O : DNF) increased strongly with physicochemical perturbation. A salinity press experiment on tidal freshwater marsh soils revealed that increased N2O production was likely driven by transcriptional inhibition of the nitrous oxide reductase (nos) gene, and that the microbial community adapted to altered salinity over a relatively short (within one month) timeframe. Perturbation appeared to confer resilience to subsequent disturbance, and denitrifiers from an environment without salinity fluctuations (tidal freshwater estuarine sediments) demonstrated a stronger N2O perturbation response than denitrifiers from environments with more variable salinity (oligohaline and mesohaline estuarine sediments), suggesting that the denitrifying community from physicochemically stable environments may have a stronger perturbation response. These findings provide a framework for improving our understanding of the dynamic nature of N2O production in soils and sediments, in which changes in physical and/or chemical conditions initiate a short-term perturbation response that promotes N2O production that moderates over time and with subsequent physicochemical perturbation. [ABSTRACT FROM AUTHOR]

A mass balance model is presented that links the total phosphorus concentration in lakes to the water residence time, Rw (lake volume divided by the annual water inflow) and the total phosphorus residence time, Rp (average standing stock of lake total phosphorous divided by the external annual total phosphorus input). Following a change in the external load, the lake total phosphorus concentration asymptotically approaches a new value that depends on the Rp:Rw ratio, with the rate of approach controlled by Rp. We applied this approach to a recent reanalysis of the water and total phosphorus budgets of the Lake Erie system of the Laurentian Great Lakes for the 2003-2016 period. We generated load–response relationships and response matrices that relate the steady state total phosphorus concentrations to external total phosphorus loads, for the whole Lake Erie system and for the individual basins (Lake St. Clair, western basin, central basin, eastern basin) and connecting channels (St. Clair River, Detroit River). These relationships and matrices provide a simple but robust framework to gauge the potential response of total phosphorus concentrations to total phosphorus load reductions, such as the 40% reduction proposed for Lake Erie under the Canada-United States Great Lakes Water Quality Agreement. The mass balance analysis further highlights the importance of inter-basin total phosphorus transfers. For example, around 70% of the total phosphorus concentration in the eastern basin is contributed by inflow from the central basin. Consequently, total phosphorus load abatements in watersheds upstream of the eastern basin, rather than in the direct watershed itself, will have the greatest impact on the eastern basin's concentration. Overall, our results illustrate how simple mass balance calculations can provide useful guidance to efforts to manage phosphorus enrichment of lakes. [ABSTRACT FROM AUTHOR]

Microbial degradation of organic matter is a key driver of subsurface biogeochemistry. Here, we present a bioenergetics-informed kinetic model for the anaerobic degradation of macromolecular organic matter that accounts for extracellular hydrolysis, fermentation, and respiration. The catabolic energy generated by fermentation and respiration is allocated to biomass growth, production of extracellular hydrolytic enzymes, and cellular maintenance. Microbial cells are assumed to exist in active or dormant states with marked differences in maintenance energy requirements. Dormant cells are further assumed to fulfill their maintenance energy requirements by utilizing their own biomass instead of relying on external substrates. When the catabolic Gibbs energy production for a given functional group of microorganisms exceeds the total maintenance energy requirement of the active cells, biomass growth, re-activation of dormant cells, and production of extracellular hydrolytic enzymes are possible. The latter, in turn, allows the microbial community to access more of the available external organic substrates. In the opposite case, active cells decay or become dormant. We apply the model to simulate the anaerobic degradation of cellulose by a hypothetical microbial community consisting of cellulolytic fermenting bacteria and sulfate-reducing bacteria, under conditions representative of those encountered in water-saturated subsurface environments. [ABSTRACT FROM AUTHOR]

Lakes are key ecosystems within the global biogeosphere. However, the bottom-up controls on the biological productivity of lakes, including surface temperature, ice phenology, nutrient loads and mixing regime, are increasingly altered by climate warming and land-use changes. To better understand the environmental drivers of lake productivity, we assembled a dataset on chlorophyll-a concentrations, as well as associated water quality parameters and surface solar irradiance, for temperate and cold-temperate lakes experiencing seasonal ice cover. We developed a method to identify periods of rapid algal growth from in situ chlorophyll-a time series data and applied it to measurements performed between 1964 and 2019 across 357 lakes, predominantly located north of 40°. Long-term trends show that the algal growth windows have been occurring earlier in the year, thus potentially extending the growing season and increasing the annual productivity of northern lakes. The dataset is also used to analyze the relationship between chlorophyll-a growth rates and solar irradiance. Lakes of higher trophic status exhibit a higher sensitivity to solar radiation, especially at moderate irradiance values during spring. The lower sensitivity of chlorophyll-a growth rates to solar irradiance in oligotrophic lakes likely reflects the dominant role of nutrient limitation. Chlorophyll-a growth rates are significantly influenced by light availability in spring but not in summer and fall, consistent with a switch to top-down control of summer and fall algal communities. The growth window dataset can be used to analyze trends in lake productivity across the northern hemisphere or at smaller, regional scales. We present some general trends in the data and encourage other researchers to use the open dataset for their own research questions. [ABSTRACT FROM AUTHOR]

The microbial reduction of manganese (Mn) oxide in the Orca Basin, Gulf of Mexico, coupled with high organic matter oxidation, contributed much to the increase of dissolved Mn(II) in the area. Researchers further noted a significant increase in the salinity level of the basin, registering a 35% to 260% increase during the redox transition period. Oxidative degradation of organic matter in the area was also attributed to the increased residence time of organic-rich particles.

Data from modern and ancient marine sediments demonstrate that burial of the limiting nutrient phosphorus is less efficient when bottom waters are low in oxygen. Mass-balance calculations using a coupled model of the biogeochemical cycles of carbon, phosphorus, oxygen, and iron indicate that the redox dependence of phosphorus burial in the oceans provides a powerful forcing mechanism for balancing production and consumption of atmospheric oxygen over geologic time. The oxygen-phosphorus coupling further guards against runaway ocean anoxia. Phosphorus-mediated redox stabilization of the atmosphere and oceans may have been crucial to the radiation of higher life forms during the Phanerozoic., The fossil and sedimentary records imply that the oxygen level of the atmosphere has remained within a fairly narrow range during most of the Phanerozoic (1, 2). The presence of [...]

Bioirrigation, in one-dimensional (1D) early diagenetic models, is typically represented by a nonlocal mass transfer or bioirrigation coefficient; alpha that represents all pore water species. Demonstrations reveal that this assumption could possibly lead to significant errors in estimates of bioirrigation intensities.

Population densities of anaerobic Fe(III)-reducing bacteria (FeRB) and aerobic heterotrophs were inversely correlated in the surficial (0-2 cm) layers of Sapelo Island, Georgia, salt marsh sediments. In surficial sediments where densities of aerobic heterotrophs were low, the density of culturable FeRB correlated positively with the concentration of amorphous Fe(III) oxyhydroxides extractable by ascorbate. High FeRB densities and a decrease with depth of ascorbate-extractable Fe(III) were observed in the upper 6 cm of a tidal creek core. Culturable sulfate-reducing bacteria (SRB) and SRB-targeted rRNA signals were also detected in the upper 6-cm depth. The disappearance of FeRB below 6 cm, however, coincided with a large increase in the abundance of SRB. Thus, when FeRB are not limited by the availability of readily reducible amorphous Fe(III) oxyhydroxides, FeRB may outcompete SRB for growth substrates. Shewanella putrefaciens- and Geobacteraceae-targeted rRNA signals were at or below detection limits in all sediment samples, indicating that these FeRB are not predominant members of the active FeRB populations. The ubiquitous presence of FeRB at the sites studied challenges the traditional view that dissimilatory Fe(III) reduction is not an important pathway of organic carbon oxidation in salt marsh sediments. [ABSTRACT FROM AUTHOR]

Abstract: Sulfur isotope fractionation during microbial sulfate reduction in brackish estuarine sediments was studied using an experimental flow-through reactor approach designed to preserve the in situ physical, geochemical and microbial structure of the sediment. Concurrent measurements of potential sulfate reduction rates and 34S/32S fractionations were carried out using intact sediment slices (2cm thick, 4.2cm diameter) from unvegetated, intertidal sites adjoining a salt marsh along the Scheldt estuary, The Netherlands. A total of 30 reactor experiments were performed with sediments collected in February, May and October 2006. The effects of incubation temperature (10, 20, 30 and 50°C) and sediment depth (0–2, 4–6 and 8–10cm) were investigated. Sulfate was supplied in non-limiting concentrations via the reactor inflow solutions; no external electron donor was supplied. Isotope fractionations (ε values) were calculated from the measured differences in sulfate δ34S between in- and outflow solutions of the reactors, under quasi-steady state conditions. Potential sulfate reduction rates (SRR) varied over one order of magnitude (5–49nmolcm−3 h−1) and were highest in the 30°C incubations. They decreased systematically with depth, and were highest in the sediments collected closest to the vegetated marsh. Isotope fractionations ranged from 9‰ to 34‰ and correlated inversely with SRR, as predicted by the standard fractionation model for enzymatic sulfate reduction of . The ε versus SRR relationship, however, varied between sampling times, with higher ε values measured in February, at comparable SRRs, than in May and October. The observed ε versus SRR relationships also deviated from the previously reported inverse trend for sediments collected in a marine lagoon in Denmark (). Thus, isotope fractionation during sulfate reduction is not uniquely determined by SRR, but is site- and time-dependent. Factors that may affect the ε versus SRR relationship include the structure and size of the sulfate-reducing community, and the nature and accessibility of organic substrates. Whole-sediment data such as those presented here provide a link between isotopic fractionations measured with pure cultures of sulfate-reducing prokaryotes and sulfur isotopic signatures recorded in sedimentary deposits. [Copyright &y& Elsevier]

Life and element cycling on Earth is directly related to electron transfer (or redox) reactions. An understanding of biogeochemical redox processes is crucial for predicting and protecting environmental health and can provide new opportunities for engineered remediation strategies. Energy can be released and stored by means of redox reactions via the oxidation of labile organic carbon or inorganic compounds (electron donors) by microorganisms coupled to the reduction of electron acceptors including humic substances, iron-bearing minerals, transition metals, metalloids, and actinides. Environmental redox processes play key roles in the formation and dissolution of mineral phases. Redox cycling of naturally occurring trace elements and their host minerals often controls the release or sequestration of inorganic contaminants. Redox processes control the chemical speciation, bioavailability, toxicity, and mobility of many major and trace elements including Fe, Mn, C, P, N, S, Cr, Cu, Co, As, Sb, Se, Hg, Tc, and U. Redox-active humic substances and mineral surfaces can catalyze the redox transformation and degradation of organic contaminants. In this review article, we highlight recent advances in our understanding of biogeochemical redox processes and their impact on contaminant fate and transport, including future research needs.