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205 results on '"Capobianchi M.R."'

1. The European Virus Archive goes global: A growing resource for research

Author

Romette, J.L., Prat, C.M., Gould, E.A., de Lamballerie, X., Charrel, R., Coutard, B., Fooks, A.R., Bardsley, M., Carroll, M., Drosten, C., Drexler, J.F., Günther, S., Klempa, B., Pinschewer, D., Klimkait, T., Avsic-Zupanc, T., Capobianchi, M.R., Dicaro, A., Ippolito, G., Nitsche, A., Koopmans, M., Reusken, C., Gorbalenya, A., Raoul, H., Bourhy, H., Mettenleiter, T., Reiche, S., Batten, C., Sabeta, C., Paweska, J.T., Eropkin, M., Zverev, V., Hu, Z., Mac Cullough, S., Mirazimi, A., Pradel, F., and Lieutaud, P.

Published
2018
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2. EBOLA Ag K-SeT rapid test: field evaluation in Sierra Leone

Author

Colavita, F., Biava, M., Mertens, P., Gilleman, Q., Borlon, C., Delli Guanti, M., Petrocelli, A., Cataldi, G., Kamara, A.T., Kamara, S.A., Konneh, K., Vincenti, D., Castilletti, C., Abdurahman, S., Mirazimi, A., Capobianchi, M.R., Ippolito, G., Miccio, R., and Di Caro, A.

Published
2018
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3. Evaluation of a rapid and sensitive RT-qPCR assay for the detection of Ebola Virus

Author

Biava, M., Colavita, F., Marzorati, A., Russo, D., Pirola, D., Cocci, A., Petrocelli, A., Delli Guanti, M., Cataldi, G., Kamara, T.A., Kamara, A.S., Konneh, K., Cannas, A., Coen, S., Quartu, S., Meschi, S., Valli, M.B., Mazzarelli, A., Venditti, C., Grassi, G., Rozera, G., Castilletti, C., Mirazimi, A., Capobianchi, M.R., Ippolito, G., Miccio, R., and Di Caro, A.

Published
2018
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10. Increased risk of virologic failure to the first antiretroviral regimen in HIV-infected migrants compared to natives: data from the ICONA cohort

Author

Moroni, M., Andreoni, M., Angarano, G., Antinori, A., d’Arminio Monforte, A., Castelli, F., Cauda, R., Di Perri, G., Galli, M., Iardino, R., Ippolito, G., Lazzarin, A., Perno, C.F., von Schloesser, F., Viale, P., Castagna, A., Ceccherini-Silberstein, F., Cozzi-Lepri, A., Girardi, E., Lo Caputo, S., Mussini, C., Puoti, M., Ammassari, A., Balotta, C., Bonfanti, P., Bonora, S., Borderi, M., Capobianchi, M.R., Cingolani, A., Cinque, P., De Luca, A., Di Biagio, A., Gianotti, N., Gori, A., Guaraldi, G., Lapadula, G., Lichtner, M., Madeddu, G., Maggiolo, F., Marchetti, G., Marcotullio, S., Monno, L., Quiros Roldan, E., Rusconi, S., Saracino, A., Cicconi, P., Fanti, I., Galli, L., Lorenzini, P., Shanyinda, M., Tavelli, A., Giacometti, A., Costantini, A., Mazzoccato, S., Santoro, C., Suardi, C., Vanino, E., Verucchi, G., Minardi, C., Quirino, T., Abeli, C., Manconi, P.E., Piano, P., Vecchiet, J., Falasca, K., Sighinolfi, L., Segala, D., Mazzotta, F., Cassola, G., Viscoli, C., Alessandrini, A., Piscopo, R., Mazzarello, G., Mastroianni, C., Belvisi, V., Caramma, I., Chiodera, A., Castelli, A.P., Rizzardini, G., Ridolfo, A.L., Piolini, R., Salpietro, S., Carenzi, L., Moioli, M.C., Tincati, C., Puzzolante, C., Abrescia, N., Chirianni, A., Borgia, G., Guida, M.G., Gargiulo, M., Gentile, I., Orlando, R., Baldelli, F., Francisci, D., Parruti, G., Ursini, T., Magnani, G., Ursitti, M.A., Vullo, V., d’Avino, A., Gallo, L., Nicastri, E., Acinapura, R., Capozzi, M., Libertone, R., Tebano, G., Zaccarelli, M., Viviani, F., Sasset, L., Mura, M.S., Rossetti, B., Caramello, P., Orofino, G.C., Sciandra, M., Bassetti, M., Londero, A., Pellizzer, G., and Manfrin, V.

Published
2016
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13. Epidemic and pandemic viral infections: impact on tuberculosis and the lung: A consensus by the World Association for Infectious Diseases and Immunological Disorders (WAidid), Global Tuberculosis Network (GTN), and members of the European Society of Clinical Microbiology and Infectious Diseases Study Group for Mycobacterial Infections (ESGMYC)

Author

Ong, C.W.M., Migliori, G.B., Raviglione, M., MacGregor-Skinner, G., Sotgiu, G., Alffenaar, J.W.C., Tiberi, S., Adlhoch, C., Alonzi, T., Archuleta, S., Brusin, S., Cambau, E., Capobianchi, M.R., Castilletti, C., Centis, R., Cirillo, D.M., D'Ambrosio, L., Delogu, G., Esposito, S.M.R., Figueroa, J., Friedland, J.S., Ho, B.C.H., Ippolito, G., Jankovic, M., Kim, H.Y., Klintz, S. Rosales, Ködmön, C., Lalle, E., Leo, Y.S., Leung, C.C., Märtson, A.G., Melazzini, M.G., Fard, S. Najafi, Penttinen, P., Petrone, L., Petruccioli, E., Pontali, E., Saderi, L., Santin, M., Spanevello, A., Crevel, R. van, Werf, M.J. van der, Visca, D., Viveiros, M., Zellweger, J.P., Zumla, A., Goletti, D., Ong, C.W.M., Migliori, G.B., Raviglione, M., MacGregor-Skinner, G., Sotgiu, G., Alffenaar, J.W.C., Tiberi, S., Adlhoch, C., Alonzi, T., Archuleta, S., Brusin, S., Cambau, E., Capobianchi, M.R., Castilletti, C., Centis, R., Cirillo, D.M., D'Ambrosio, L., Delogu, G., Esposito, S.M.R., Figueroa, J., Friedland, J.S., Ho, B.C.H., Ippolito, G., Jankovic, M., Kim, H.Y., Klintz, S. Rosales, Ködmön, C., Lalle, E., Leo, Y.S., Leung, C.C., Märtson, A.G., Melazzini, M.G., Fard, S. Najafi, Penttinen, P., Petrone, L., Petruccioli, E., Pontali, E., Saderi, L., Santin, M., Spanevello, A., Crevel, R. van, Werf, M.J. van der, Visca, D., Viveiros, M., Zellweger, J.P., Zumla, A., and Goletti, D.

Abstract

Contains fulltext : 225854.pdf (Publisher’s version ) (Open Access), Major epidemics, including some that qualify as pandemics, such as severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), HIV, influenza A (H1N1)pdm/09 and most recently COVID-19, affect the lung. Tuberculosis (TB) remains the top infectious disease killer, but apart from syndemic TB/HIV little is known regarding the interaction of viral epidemics and pandemics with TB. The aim of this consensus-based document is to describe the effects of viral infections resulting in epidemics and pandemics that affect the lung (MERS, SARS, HIV, influenza A (H1N1)pdm/09 and COVID-19) and their interactions with TB. A search of the scientific literature was performed. A writing committee of international experts including the European Centre for Disease Prevention and Control Public Health Emergency (ECDC PHE) team, the World Association for Infectious Diseases and Immunological Disorders (WAidid), the Global Tuberculosis Network (GTN), and members of the European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Mycobacterial Infections (ESGMYC) was established. Consensus was achieved after multiple rounds of revisions between the writing committee and a larger expert group. A Delphi process involving the core group of authors (excluding the ECDC PHE team) identified the areas requiring review/consensus, followed by a second round to refine the definitive consensus elements. The epidemiology and immunology of these viral infections and their interactions with TB are discussed with implications for diagnosis, treatment and prevention of airborne infections (infection control, viral containment and workplace safety). This consensus document represents a rapid and comprehensive summary on what is known on the topic.

Published
2020

19. Geographical Variability Affects CCHFV Detection by RT-PCR: A Tool for In-Silico Evaluation of Molecular Assays

Author

Gruber, C.E.M. (Cesare E M), Bartolini, B. (Barbara), Castilletti, C. (Concetta), Mirazimi, A. (Ali), Hewson, R. (Roger), Christova, I., Avšič, T. (Tatjana), Grunow, R. (Roland), Papa, A. (Anna), Sanchez-Seco, M.P. (Maria Paz), Kopmans, M. (Marion), Ippolito, G. (Giuseppe), Capobianchi, M.R. (Maria Rosaria), Reusken, C.B.E.M. (Chantal), Caro, A.D. (Antonino Di), Gruber, C.E.M. (Cesare E M), Bartolini, B. (Barbara), Castilletti, C. (Concetta), Mirazimi, A. (Ali), Hewson, R. (Roger), Christova, I., Avšič, T. (Tatjana), Grunow, R. (Roland), Papa, A. (Anna), Sanchez-Seco, M.P. (Maria Paz), Kopmans, M. (Marion), Ippolito, G. (Giuseppe), Capobianchi, M.R. (Maria Rosaria), Reusken, C.B.E.M. (Chantal), and Caro, A.D. (Antonino Di)

Abstract

The Crimean-Congo hemorrhagic fever virus (CCHFV) is considered to be a major emerging infectious threat, according to the WHO R&D blueprint. A wide range of CCHFV molecular assays have been developed, employing varied primer/probe combinations. The high genetic variability of CCHFV often hampers the efficacy of available molecular tests and can affect their diagnostic potential. Recently, increasing numbers of complete CCHFV genomic sequences have become available, allowing a better appreciation of the genomic evolution of this virus. We summarized the current knowledge on molecular methods and developed a new bioinformatics tool to evaluate the existing assays for CCHFV detection, with a special focus on strains ci

Published
2019
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20. Laboratory management of Crimean-Congo haemorrhagic fever virus infections: perspectives from two European networks

Author

Bartolini, B., Gruber, C.E.M., Koopmans D.V.M., M.P.G. (Marion), Avsic, T., Bino, S., Christova, I., Grunow, R., Hewson, R., Korukluoglu, G., Lemos, C.M., Mirazimi, A., Papa, A, Sanchez-Seco, MP, Sauer, A.V. (Aisha), Zeller, H., Nisii, C., Capobianchi, M.R., Ippolito, G., Reusken, C.B.E.M. (Chantal), Di Caro, A, Bartolini, B., Gruber, C.E.M., Koopmans D.V.M., M.P.G. (Marion), Avsic, T., Bino, S., Christova, I., Grunow, R., Hewson, R., Korukluoglu, G., Lemos, C.M., Mirazimi, A., Papa, A, Sanchez-Seco, MP, Sauer, A.V. (Aisha), Zeller, H., Nisii, C., Capobianchi, M.R., Ippolito, G., Reusken, C.B.E.M. (Chantal), and Di Caro, A

Abstract

Background: Crimean-Congo haemorrhagic fever virus (CCHFV) is considered an emerging infectious disease threat in the European Union. Since 2000, the incidence and geographic range of confirmed CCHF cases have markedly increased, following changes in the distribution of its main vector, Hyalomma ticks. Aims: To review scientific literature and collect experts’ opinion to analyse relevant aspects of the laboratory management of human CCHF cases and any exposed contacts, as well as identify areas for advancement of international collaborative preparedness and laboratory response plans. Methods: We conducted a literature review on CCHF molecular diagnostics through an online search. Further, we obtained expert opinions on the key laboratory aspects of CCHF diagnosis. Consulted experts were members of two European projects, EMERGE (Efficient response to highly dangerous and emerging pathogens at EU level) and EVDLabNet (Emerging Viral Diseases-Expert Laborator

Published
2019
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24. Overproduction of IL-6 and Type I IFN in a lethal case of Chikungunya virus infection in an elderly man during the 2017 Italian outbreak

Author

Colavita, F., primary, Vita, S., additional, Lalle, E., additional, Bordi, L., additional, Carletti, F., additional, Pozzetto, I., additional, Aiuti, M., additional, Vincenti, D., additional, Cimini, E., additional, Vairo, F., additional, Capobianchi, M.R., additional, Lichtner, M., additional, and Castilletti, C., additional

Published
2019
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25. The contribution of the European high containment laboratories during the 2014–2015 Ebola Virus Disease emergency

Author

Nisii, C., Vincenti, D., Fusco, F.M., Schmidt-Chanasit, J., Carbonnelle, C., Raoul, H., Eickmann, M., Hewson, R., Brave, A., Nuncio, S., Sanchez-Seco, M.P., Palyi, B., Kis, Z., Zange, S., Nitsche, A., Kurth, A., Strasser, M., Capobianchi, M.R., Ozin, A., Guglielmetti, P., Menel-Lemos, C., Jacob, D., Grunow, R., Ippolito, G., and Di Caro, A.

Published
2017
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26. The European Virus Archive goes global: A growing resource for research

Author

Romette, J.L. (J. L.), Prat, C.M. (C. M.), Gould, D.B. (Douglas ), de Lamballerie, X. (Xavier), Charrel, R. (R.), Coutard, B. (Bruno), Fooks, A.R. (Anthony), Bardsley, M. (M.), Carroll, M. (M.), Drosten, C. (Christian), Drexler, J.-F. (Jan-Felix), Günther, S. (Stephan), Klempa, B., Pinschewer, D. (D.), Klimkait, T., Avsic-Zupanc, T., Capobianchi, M.R. (Maria Rosaria), Dicaro, A. (A.), Ippolito, G. (G.), Nitsche, A., Koopmans D.V.M., M.P.G. (Marion), Reusken, C.B.E.M. (Chantal), Gorbalenya, A.E. (Alexander), Raoul, H. (H.), Bourhy, J.H., Mettenleiter, T.C. (Thomas C.), Reiche, S. (S.), Batten, C. (C.), Sabeta, C. (C.), Paweska, J.T. (Janusz T.), Eropkin, M. (M.), Zverev, V. (V.), Hu, Z. (Z.), Mac Cullough, S. (S.), Mirazimi, A. (A.), Pradel, F. (F.), Lieutaud, P. (P.), Romette, J.L. (J. L.), Prat, C.M. (C. M.), Gould, D.B. (Douglas ), de Lamballerie, X. (Xavier), Charrel, R. (R.), Coutard, B. (Bruno), Fooks, A.R. (Anthony), Bardsley, M. (M.), Carroll, M. (M.), Drosten, C. (Christian), Drexler, J.-F. (Jan-Felix), Günther, S. (Stephan), Klempa, B., Pinschewer, D. (D.), Klimkait, T., Avsic-Zupanc, T., Capobianchi, M.R. (Maria Rosaria), Dicaro, A. (A.), Ippolito, G. (G.), Nitsche, A., Koopmans D.V.M., M.P.G. (Marion), Reusken, C.B.E.M. (Chantal), Gorbalenya, A.E. (Alexander), Raoul, H. (H.), Bourhy, J.H., Mettenleiter, T.C. (Thomas C.), Reiche, S. (S.), Batten, C. (C.), Sabeta, C. (C.), Paweska, J.T. (Janusz T.), Eropkin, M. (M.), Zverev, V. (V.), Hu, Z. (Z.), Mac Cullough, S. (S.), Mirazimi, A. (A.), Pradel, F. (F.), and Lieutaud, P. (P.)

Abstract

The European Virus Archive (EVA) was created in 2008 with funding from the FP7-EU Infrastructure Programme, in response to the need for a coordinated and readily accessible collection of viruses that could be made available to academia, public health organisations and industry. Within three years, it developed from a consortium of nine European laboratories to encompass associated partners in Africa, Russia, China, Turkey, Germany and Italy. In 2014, the H2020 Research and Innovation Framework Programme (INFRAS projects) provided support for the transformation of the EVA from a European to a global organization (EVAg). The EVAg now operates as a non-profit consortium, with 26 partners and 20 associated partners from 21 EU and non-EU countries. In this paper, we outline the structure, management and goals of the EVAg, to bring to the attention of researchers the wealth of products it can provide and to illustrate how end-users can gain access to these resources. Organisations or individuals who would like to be considered as contributors are invited to contact the EVAg coordinator, Jean-Louis Romette, at jean-louis.romette@univmed.fr.

Published
2018
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28. National quality control and validation of hepatitis C NS3, NS5A and NS5B genotypic resistance testing

Author

Ruggiero, T., primary, Cento, V., additional, Aragri, M., additional, Arosio, M., additional, Baldanti, F., additional, Brunetto, M., additional, Bruzzone, B., additional, Boeri, E., additional, Cavallone, D., additional, Nicola, C., additional, Stefano, M.A.D., additional, Ghisetti, V., additional, Callegaro, M.P., additional, Capobianchi, M.R., additional, Caudai, C., additional, Cuomo, N., additional, Galli, S., additional, Galmozzi, E., additional, Garbuglia, A., additional, Gennari, W., additional, Lai, A., additional, Menzo, S., additional, Micheli, V., additional, Minosse, C., additional, Monno, L., additional, Paolucci, S., additional, Pollicino, T., additional, Raddi, A., additional, Raffa, G., additional, Raimondo, G., additional, Sanguinetti, M., additional, Santangelo, R., additional, Santantonio, T., additional, Soldini, S., additional, Starace, M., additional, Vatteroni, M.L., additional, Craxi, A., additional, Perno, C.F., additional, Silberstein, F.C., additional, and Zazzi, M., additional

Published
2018
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29. MetaShot: an accurate workflow for taxon classification of host-associated microbiome from shotgun metagenomic data

Author

Universitat Politècnica de Catalunya. Departament de Ciències de la Computació, Universitat Politècnica de Catalunya. ALBCOM - Algorismia, Bioinformàtica, Complexitat i Mètodes Formals, Fosso, Bruno, Santamaria, Monica, D'Antonio, M., Lovero, D., Corrado, G., Vizza, E., Passaro, N., Garbuglia, A.R., Capobianchi, M.R., Crescenzi, M., Valiente Feruglio, Gabriel Alejandro, Pesole, Graziano, Universitat Politècnica de Catalunya. Departament de Ciències de la Computació, Universitat Politècnica de Catalunya. ALBCOM - Algorismia, Bioinformàtica, Complexitat i Mètodes Formals, Fosso, Bruno, Santamaria, Monica, D'Antonio, M., Lovero, D., Corrado, G., Vizza, E., Passaro, N., Garbuglia, A.R., Capobianchi, M.R., Crescenzi, M., Valiente Feruglio, Gabriel Alejandro, and Pesole, Graziano

Abstract

Shotgun metagenomics by high-throughput sequencing may allow deep and accurate characterization of host-associated total microbiomes, including bacteria, viruses, protists and fungi. However, the analysis of such sequencing data is still extremely challenging in terms of both overall accuracy and computational efficiency, and current methodologies show substantial variability in misclassification rate and resolution at lower taxonomic ranks or are limited to specific life domains (e.g. only bacteria). We present here MetaShot, a workflow for assessing the total microbiome composition from host-associated shotgun sequence data, and show its overall optimal accuracy performance by analyzing both simulated and real datasets., Peer Reviewed, Postprint (published version)

Published
2017

31. Incidence and progression to cirrhosis of new hepatitis C virus infections in persons living with human immunodeficiency virus

Author

Puoti, M., primary, Lorenzini, P., additional, Cozzi-Lepri, A., additional, Gori, A., additional, Mastroianni, C., additional, Rizzardini, G., additional, Mazzarello, G., additional, Antinori, A., additional, d'Arminio Monforte, A., additional, Girardi, E., additional, d’Arminio Monforte, A., additional, Andreoni, M., additional, Angarano, G., additional, Castelli, F., additional, Cauda, R., additional, Di Perri, G., additional, Galli, M., additional, Iardino, R., additional, Ippolito, G., additional, Lazzarin, A., additional, Perno, C.F., additional, von Schloesser, F., additional, Viale, P., additional, Castagna, A., additional, Ceccherini-Silberstein, F., additional, Lo Caputo, S., additional, Mussini, C., additional, Puoti, M., additional, Ammassari, A., additional, Balotta, C., additional, Bandera, A., additional, Bonfanti, P., additional, Bonora, S., additional, Borderi, M., additional, Calcagno, A., additional, Calza, L., additional, Capobianchi, M.R., additional, Cingolani, A., additional, Cinque, P., additional, De Luca, A., additional, Di Biagio, A., additional, Gianotti, N., additional, Guaraldi, G., additional, Lapadula, G., additional, Lichtner, M., additional, Madeddu, G., additional, Maggiolo, F., additional, Marchetti, G., additional, Marcotullio, S., additional, Monno, L., additional, Nozza, S., additional, Quiros Roldan, E., additional, Rossotti, R., additional, Rusconi, S., additional, Santoro, M.M., additional, Saracino, A., additional, Zaccarelli, M., additional, Fanti, I., additional, Galli, L., additional, Rodano, A., additional, Shanyinde, M., additional, Tavelli, A., additional, Carletti, F., additional, Carrara, S., additional, Di Caro, A., additional, Graziano, S., additional, Petrone, F., additional, Prota, G., additional, Quartu, S., additional, Truffa, S., additional, Giacometti, Italy A., additional, Costantini, A., additional, Valeriani, C., additional, Santoro, C., additional, Suardi, C., additional, Donati, V., additional, Verucchi, G., additional, Minardi, C., additional, Quirino, T., additional, Abeli, C., additional, Manconi, P.E., additional, Piano, P., additional, Cacopardo, B., additional, Celesia, B., additional, Vecchiet, J., additional, Falasca, K., additional, Sighinolfi, L., additional, Segala, D., additional, Mazzotta, F., additional, Vichi, F., additional, Cassola, G., additional, Viscoli, C., additional, Alessandrini, A., additional, Bobbio, N., additional, Belvisi, V., additional, Caramma, I., additional, Chiodera, A., additional, Castelli, A.P., additional, Ridolfo, A.L., additional, Piolini, R., additional, Salpietro, S., additional, Carenzi, L., additional, Moioli, M.C., additional, Tincati, C., additional, Puzzolante, C., additional, Abrescia, N., additional, Chirianni, A., additional, Borgia, G., additional, Di Martino, F., additional, Maddaloni, L., additional, Gentile, I., additional, Orlando, R., additional, Baldelli, F., additional, Francisci, D., additional, Parruti, G., additional, Ursini, T., additional, Magnani, G., additional, Ursitti, M.A., additional, Vullo, V., additional, Cristaudo, A., additional, Baldin, G., additional, Cicalini, S., additional, Gallo, L., additional, Nicastri, E., additional, Acinapura, R., additional, Capozzi, M., additional, Libertone, R., additional, Savinelli, S., additional, Latini, A., additional, Iaiani, G., additional, Fontanelli Sulekova, L., additional, Cecchetto, M., additional, Viviani, F., additional, Mura, M.S., additional, Rossetti, B., additional, Caramello, P., additional, Orofino, G.C., additional, Sciandra, M., additional, Bassetti, M., additional, Londero, A., additional, Pellizzer, G., additional, and Manfrin, V., additional

Published
2017
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32. Lower proportion of sustained virologic response and higher residual HCV viremia at the end of direct-acting antivirals treatment in HIV/HCV co-infected as compared with HCV mono-infected patients: meaning and correlates

Author

Mastrorosa, I., primary, Comandini, U.V., additional, Ammassari, A., additional, Fabbri, G., additional, Garbuglia, A.R., additional, Capobianchi, M.R., additional, D’Offizi, G., additional, Lionetti, R., additional, Vergori, A., additional, Giannetti, A., additional, Antinori, A., additional, and Zaccarelli, M., additional

Published
2017
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33. Detection of viral RNA in tissues following plasma clearance from an Ebola virus infected patient

Author

Biava, M., primary, Caglioti, C., additional, Bordi, L., additional, Castilletti, C., additional, Colavita, F., additional, Quartu, S., additional, Nicastri, E., additional, Lauria, F.N., additional, Petrosillo, N., additional, Lanini, S., additional, Hoenen, T., additional, Kobinger, G., additional, Zumla, A., additional, Di Caro, A., additional, Ippolito, G., additional, Capobianchi, M.R., additional, and Lalle, E., additional

Published
2016
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34. Increased risk of virologic failure to the first antiretroviral regimen in HIV-infected migrants compared to natives: data from the ICONA cohort

Author

Saracino, A., primary, Lorenzini, P., additional, Lo Caputo, S., additional, Girardi, E., additional, Castelli, F., additional, Bonfanti, P., additional, Rusconi, S., additional, Caramello, P., additional, Abrescia, N., additional, Mussini, C., additional, Monno, L., additional, d’Arminio Monforte, A., additional, Moroni, M., additional, Andreoni, M., additional, Angarano, G., additional, Antinori, A., additional, Cauda, R., additional, Di Perri, G., additional, Galli, M., additional, Iardino, R., additional, Ippolito, G., additional, Lazzarin, A., additional, Perno, C.F., additional, von Schloesser, F., additional, Viale, P., additional, Castagna, A., additional, Ceccherini-Silberstein, F., additional, Cozzi-Lepri, A., additional, Puoti, M., additional, Ammassari, A., additional, Balotta, C., additional, Bonora, S., additional, Borderi, M., additional, Capobianchi, M.R., additional, Cingolani, A., additional, Cinque, P., additional, De Luca, A., additional, Di Biagio, A., additional, Gianotti, N., additional, Gori, A., additional, Guaraldi, G., additional, Lapadula, G., additional, Lichtner, M., additional, Madeddu, G., additional, Maggiolo, F., additional, Marchetti, G., additional, Marcotullio, S., additional, Quiros Roldan, E., additional, Saracino, A., additional, Cicconi, P., additional, Fanti, I., additional, Galli, L., additional, Shanyinda, M., additional, Tavelli, A., additional, Giacometti, A., additional, Costantini, A., additional, Mazzoccato, S., additional, Santoro, C., additional, Suardi, C., additional, Vanino, E., additional, Verucchi, G., additional, Minardi, C., additional, Quirino, T., additional, Abeli, C., additional, Manconi, P.E., additional, Piano, P., additional, Vecchiet, J., additional, Falasca, K., additional, Sighinolfi, L., additional, Segala, D., additional, Mazzotta, F., additional, Cassola, G., additional, Viscoli, C., additional, Alessandrini, A., additional, Piscopo, R., additional, Mazzarello, G., additional, Mastroianni, C., additional, Belvisi, V., additional, Caramma, I., additional, Chiodera, A., additional, Castelli, A.P., additional, Rizzardini, G., additional, Ridolfo, A.L., additional, Piolini, R., additional, Salpietro, S., additional, Carenzi, L., additional, Moioli, M.C., additional, Tincati, C., additional, Puzzolante, C., additional, Chirianni, A., additional, Borgia, G., additional, Guida, M.G., additional, Gargiulo, M., additional, Gentile, I., additional, Orlando, R., additional, Baldelli, F., additional, Francisci, D., additional, Parruti, G., additional, Ursini, T., additional, Magnani, G., additional, Ursitti, M.A., additional, Vullo, V., additional, d’Avino, A., additional, Gallo, L., additional, Nicastri, E., additional, Acinapura, R., additional, Capozzi, M., additional, Libertone, R., additional, Tebano, G., additional, Zaccarelli, M., additional, Viviani, F., additional, Sasset, L., additional, Mura, M.S., additional, Rossetti, B., additional, Orofino, G.C., additional, Sciandra, M., additional, Bassetti, M., additional, Londero, A., additional, Pellizzer, G., additional, and Manfrin, V., additional

Published
2016
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35. THU-359 - National quality control and validation of hepatitis C NS3, NS5A and NS5B genotypic resistance testing

Author

Ruggiero, T., Cento, V., Aragri, M., Arosio, M., Baldanti, F., Brunetto, M., Bruzzone, B., Boeri, E., Cavallone, D., Nicola, C., Stefano, M.A.D., Ghisetti, V., Callegaro, M.P., Capobianchi, M.R., Caudai, C., Cuomo, N., Galli, S., Galmozzi, E., Garbuglia, A., Gennari, W., Lai, A., Menzo, S., Micheli, V., Minosse, C., Monno, L., Paolucci, S., Pollicino, T., Raddi, A., Raffa, G., Raimondo, G., Sanguinetti, M., Santangelo, R., Santantonio, T., Soldini, S., Starace, M., Vatteroni, M.L., Craxi, A., Perno, C.F., Silberstein, F.C., and Zazzi, M.

Published
2018
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36. National quality control and validation of hepatitis C NS3, NS5A and NS5B genotypic resistance testing

Author

Ruggiero, T., Cento, V., Aragri, M., Arosio, M., Baldanti, F., Brunetto, M., Bruzzone, B., Boeri, E., Cavallone, D., Coppola, N., Di Stefano, M., Ghisetti, V., Callegaro, A.P., Capobianchi, M.R., Caudai, C., Cuomo, N., Galli, S., Galmozzi, E., Garbuglia, A.R., Gennari, W., Lai, A., Menzo, S., Micheli, V., Minosse, C., Monno, L., Paolucci, S., Pollicino, T., Raddi, A., Raffa, G., Raimondo, G., Sanguinetti, M., Sampaolo, M., Santangelo, R., Santantonio, T., Soldini, S., Starace, M., Vatteroni, M.L., Craxì, A., Perno, C.F., Ceccherini-Silberstein, F., and Zazzi, M.

Published
2018
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38. P0546 : In vivo impact of precore mutations of HBV on viral replicative capacity, viral protein processing, and virion assembly. molecular correlates of histologic and immunohistochemical aspects in liver tissue from patients with chronic hepatitis B

Author

Minosse, C., primary, Baiocchini, A., additional, Coen, S., additional, Zaccaro, P., additional, Visco Comandini, U., additional, Lionetti, R., additional, Montalbano, M., additional, Del Nonno, F., additional, Vivarelli, M., additional, D’Offizi, G., additional, Capobianchi, M.R., additional, and Menzo, S., additional

Published
2015
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40. HBV genetic compartimentalization, variability and molecular correlates of histologic and immunohistochemical aspects in liver tissue: implications for the clinical management of patients with chronic hepatitis B

Author

Minosse, C., primary, Baiocchini, A., additional, Selleri, M., additional, Giombini, E., additional, Coen, S., additional, Zaccaro, P., additional, Rozera, G., additional, Vincenti, D., additional, Del Nonno, F., additional, Comandini, U. Visco, additional, Lionetti, R., additional, Montalbano, M., additional, D’Offizi, G., additional, Vivarelli, M., additional, Capobianchi, M.R., additional, and Menzo, S., additional

Published
2015
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41. European survey on laboratory preparedness, response and diagnostic capacity for crimean-congo haemorrhagic fever, 2012

Author

Fernandez-Garcia, M.D. (Maria Dolores), Negredo, A., Papa, A. (Anna), Donoso-Mantke, O., Niedrig, M., Zeller, H. (Hervé), Tenorio, A., Franco, L. (Leticia), Aberle, S.W. (Stephan), Esbroeck, M. (M.) van, Christova, I., Markotic, A. (Alemka), Kurolt, I.-C. (Ivan-Christian), Zelena, H. (Hana), Golovljova, I., Pannetier, D. (Delphine), Charrel, R. (Remi), Schmidt-Chanasit, J. (Jonas), Wölfel, R. (Roman), Capobianchi, M.R. (Maria Rosaria), Jakupi, X. (Xhevat), Storozenko, J. (Jelena), Griskevicius, A. (Algirdas), Bosevska, G. (Golubinka), Muscat, C. (Clive), Schutten, M. (Martin), Dudman, S.G. (Susanne Gjeruldsen), Alves, M.J. (M. João), Ceianu, C.S., Platonov, A. (Alexander), Bozovic, B. (Bojana), Klempa, B., Avsic, T. (Tatjana), Lundkvist, Å. (Åke), Cherpillod, P. (Pascal), Korukluoglu, G., Brown, D.W.G. (D. W G), Brooks, T. (Tim), Fernandez-Garcia, M.D. (Maria Dolores), Negredo, A., Papa, A. (Anna), Donoso-Mantke, O., Niedrig, M., Zeller, H. (Hervé), Tenorio, A., Franco, L. (Leticia), Aberle, S.W. (Stephan), Esbroeck, M. (M.) van, Christova, I., Markotic, A. (Alemka), Kurolt, I.-C. (Ivan-Christian), Zelena, H. (Hana), Golovljova, I., Pannetier, D. (Delphine), Charrel, R. (Remi), Schmidt-Chanasit, J. (Jonas), Wölfel, R. (Roman), Capobianchi, M.R. (Maria Rosaria), Jakupi, X. (Xhevat), Storozenko, J. (Jelena), Griskevicius, A. (Algirdas), Bosevska, G. (Golubinka), Muscat, C. (Clive), Schutten, M. (Martin), Dudman, S.G. (Susanne Gjeruldsen), Alves, M.J. (M. João), Ceianu, C.S., Platonov, A. (Alexander), Bozovic, B. (Bojana), Klempa, B., Avsic, T. (Tatjana), Lundkvist, Å. (Åke), Cherpillod, P. (Pascal), Korukluoglu, G., Brown, D.W.G. (D. W G), and Brooks, T. (Tim)

Abstract

Crimean-Congo haemorrhagic fever (CCHF) is an infectious viral disease that has (re-)emerged in the last decade in south-eastern Europe, and there is a risk for further geographical expansion to western Europe. Here we report the results of a survey covering 28 countries, conducted in 2012 among the member laboratories of the European Network for Diagnostics of 'Imported' Viral Diseases (ENIVD) to assess laboratory preparedness and response capacities for CCHF. The answers of 31 laboratories of the European region regarding CCHF case definition, training necessity, biosafety, quality assurance and diagnostic tests are presented. In addition, we identifie

Published
2014

42. European survey on laboratory preparedness, response and diagnostic capacity for crimean-congo haemorrhagic fever, 2012

Author

Fernandez-García, M.D., Negredo, A., Papa, Anna, Donoso-Mantke, O., Niedrig, M., Zeller, H., Tenorio, A., Franco, L., Aberle, S., van Esbroeck, M., Christova, I., Markotić, A., Kurolt, I.-C., Zelena, H., Golovljova, I., Pannetier, D., Charrel, R., Schmidt-Chanasit, J., Wölfel, R., Capobianchi, M.R., Jakupi, X., Storozenko, J., Griskevicius, A., Bosevska, G., Muscat, C., Schutten, M., Dudman, S.G., Alves, M.J., Ceianu, C., Platonov, A., Božović, Bojana, Klempa, B., Avsić, T., Lundkvist, A., Cherpillod, P., Korukluoglu, G., Brown, D., Brooks, T., Fernandez-García, M.D., Negredo, A., Papa, Anna, Donoso-Mantke, O., Niedrig, M., Zeller, H., Tenorio, A., Franco, L., Aberle, S., van Esbroeck, M., Christova, I., Markotić, A., Kurolt, I.-C., Zelena, H., Golovljova, I., Pannetier, D., Charrel, R., Schmidt-Chanasit, J., Wölfel, R., Capobianchi, M.R., Jakupi, X., Storozenko, J., Griskevicius, A., Bosevska, G., Muscat, C., Schutten, M., Dudman, S.G., Alves, M.J., Ceianu, C., Platonov, A., Božović, Bojana, Klempa, B., Avsić, T., Lundkvist, A., Cherpillod, P., Korukluoglu, G., Brown, D., and Brooks, T.

Abstract

Crimean-Congo haemorrhagic fever (CCHF) is an infectious viral disease that has (re-)emerged in the last decade in south-eastern Europe, and there is a risk for further geographical expansion to western Europe. Here we report the results of a survey covering 28 countries, conducted in 2012 among the member laboratories of the European Network for Diagnostics of 'Imported' Viral Diseases (ENIVD) to assess laboratory preparedness and response capacities for CCHF. The answers of 31 laboratories of the European region regarding CCHF case definition, training necessity, biosafety, quality assurance and diagnostic tests are presented. In addition, we identified the lack of a Regional Reference Expert Laboratory in or near endemic areas. Moreover, a comprehensive review of the biosafety level suitable to the reality of endemic areas is needed. These issues are challenges that should be addressed by European public health authorities. However, all respondent laboratories have suitable diagnostic capacities for the current situation.

Published
2014

43. Laboratory capability and surveillance testing for middle east respiratory syndrome coronavirus infection in the who European region, June 2013

Author

Pereyaslov, D., Rosin, P., Palm, D., Zeller, H., Gross, D., Brown, C.S., Struelens, M.J., Robo, Alma, Hatibi, I.H., Alis, J.C., Sargsyan, S., Gurbanov, S., Gribkova, N., van Ranst, M., Ieven, G., Patteet, S., Tomić, S., Korsun, N., Drazenović, V., Pieridou-Bagkatzouni, D., Jirincova, H., Havlickova, M., Fomsgaard, A., Rae, K., Lappalainen, M., Ikonen, N., Lina, B., van der Werf, S., Manuguerra, J.-C., Machablishvili, A., Eickmann, M., Wolff, T., Dobler, G., Schmidt-Chanasit, J., Drosten, C., Papa, Anna, Mentis, Andreas F., Kis, Z., Löve, A., Coughlan, S., Mandelboim, M., Capobianchi, M.R., Landini, M.P., Baldanti, F., Palu, G., Ghisetti, V., Donatelli, I., Nusupbayeva, G., Tokhtabakiyeva, Z., Kasymbekova, Kalia, Storozenko, J., Erne, S., Griskevicius, A., Opp, M., Barbara, C., Vratnica, Z., Reusken, C., Dudman, S.G., Hungnes, O., Pancer, K., Guiomar, R., Eder, V., Lupulescu, Emilia, Yatsyshina, S., Pisareva, M., Buzitskaya, Z., Sergeev, A., Nedeljković, Jasminka, Staroňová, E., Županc, T.A., Petrovec, M., Korva, M., Prosenc, K., Casas, I., Gaines, H., Cherpillod, P., Zakirova, N., Bosevska, G., Altas, B., Ciblak, M., Mironenko, A., Dykhanovska, T., Demchyshyna, Irina V., Bermingham, A., Rakhimov, R., Pereyaslov, D., Rosin, P., Palm, D., Zeller, H., Gross, D., Brown, C.S., Struelens, M.J., Robo, Alma, Hatibi, I.H., Alis, J.C., Sargsyan, S., Gurbanov, S., Gribkova, N., van Ranst, M., Ieven, G., Patteet, S., Tomić, S., Korsun, N., Drazenović, V., Pieridou-Bagkatzouni, D., Jirincova, H., Havlickova, M., Fomsgaard, A., Rae, K., Lappalainen, M., Ikonen, N., Lina, B., van der Werf, S., Manuguerra, J.-C., Machablishvili, A., Eickmann, M., Wolff, T., Dobler, G., Schmidt-Chanasit, J., Drosten, C., Papa, Anna, Mentis, Andreas F., Kis, Z., Löve, A., Coughlan, S., Mandelboim, M., Capobianchi, M.R., Landini, M.P., Baldanti, F., Palu, G., Ghisetti, V., Donatelli, I., Nusupbayeva, G., Tokhtabakiyeva, Z., Kasymbekova, Kalia, Storozenko, J., Erne, S., Griskevicius, A., Opp, M., Barbara, C., Vratnica, Z., Reusken, C., Dudman, S.G., Hungnes, O., Pancer, K., Guiomar, R., Eder, V., Lupulescu, Emilia, Yatsyshina, S., Pisareva, M., Buzitskaya, Z., Sergeev, A., Nedeljković, Jasminka, Staroňová, E., Županc, T.A., Petrovec, M., Korva, M., Prosenc, K., Casas, I., Gaines, H., Cherpillod, P., Zakirova, N., Bosevska, G., Altas, B., Ciblak, M., Mironenko, A., Dykhanovska, T., Demchyshyna, Irina V., Bermingham, A., and Rakhimov, R.

Abstract

Since September 2012, over 90 cases of respiratory disease caused by a novel coronavirus, now named Middle East respiratory syndrome coronavirus (MERS-CoV), have been reported in the Middle East and Europe. To ascertain the capabilities and testing experience of national reference laboratories across the World Health Organization (WHO) European Region to detect this virus, the European Centre for Disease Prevention and Control (ECDC) and the WHO Regional Office for Europe conducted a joint survey in November 2012 and a follow-up survey in June 2013. In 2013, 29 of 52 responding WHO European Region countries and 24 of 31 countries of the European Union/European Economic Area (EU/EEA) had laboratory capabilities to detect and confirm MERS-CoV cases, compared with 22 of 46 and 18 of 30 countries, respectively, in 2012. By June 2013, more than 2,300 patients had been tested in 23 countries in the WHO European Region with nine laboratory-confirmed MERS-CoV cases. These data indicate that the Region has developed significant capability to detect this emerging virus in accordance with WHO and ECDC guidance. However, not all countries had developed capabilities, and the needs to do so should be addressed. This includes enhancing collaborations between countries to ensure diagnostic capabilities for surveillance of MERS-CoV infections across the European Region.

Published
2014

44. Incidence and progression to cirrhosis of new hepatitis C virus infections in persons living with human immunodeficiency virus

Author

d’Arminio Monforte, A., Andreoni, M., Angarano, G., Antinori, A., Castelli, F., Cauda, R., Di Perri, G., Galli, M., Iardino, R., Ippolito, G., Lazzarin, A., Perno, C.F., von Schloesser, F., Viale, P., Castagna, A., Ceccherini-Silberstein, F., Cozzi-Lepri, A., Girardi, E., Lo Caputo, S., Mussini, C., Puoti, M., Ammassari, A., Balotta, C., Bandera, A., Bonfanti, P., Bonora, S., Borderi, M., Calcagno, A., Calza, L., Capobianchi, M.R., Cingolani, A., Cinque, P., De Luca, A., Di Biagio, A., Gianotti, N., Gori, A., Guaraldi, G., Lapadula, G., Lichtner, M., Madeddu, G., Maggiolo, F., Marchetti, G., Marcotullio, S., Monno, L., Nozza, S., Quiros Roldan, E., Rossotti, R., Rusconi, S., Santoro, M.M., Saracino, A., Zaccarelli, M., Fanti, I., Galli, L., Lorenzini, P., Rodano, A., Shanyinde, M., Tavelli, A., Carletti, F., Carrara, S., Di Caro, A., Graziano, S., Petrone, F., Prota, G., Quartu, S., Truffa, S., Giacometti, Italy A., Costantini, A., Valeriani, C., Santoro, C., Suardi, C., Donati, V., Verucchi, G., Minardi, C., Quirino, T., Abeli, C., Manconi, P.E., Piano, P., Cacopardo, B., Celesia, B., Vecchiet, J., Falasca, K., Sighinolfi, L., Segala, D., Mazzotta, F., Vichi, F., Cassola, G., Viscoli, C., Alessandrini, A., Bobbio, N., Mazzarello, G., Mastroianni, C., Belvisi, V., Caramma, I., Chiodera, A., Castelli, A.P., Rizzardini, G., Ridolfo, A.L., Piolini, R., Salpietro, S., Carenzi, L., Moioli, M.C., Tincati, C., Puzzolante, C., Abrescia, N., Chirianni, A., Borgia, G., Di Martino, F., Maddaloni, L., Gentile, I., Orlando, R., Baldelli, F., Francisci, D., Parruti, G., Ursini, T., Magnani, G., Ursitti, M.A., Vullo, V., Cristaudo, A., Baldin, G., Cicalini, S., Gallo, L., Nicastri, E., Acinapura, R., Capozzi, M., Libertone, R., Savinelli, S., Latini, A., Iaiani, G., Fontanelli Sulekova, L., Cecchetto, M., Viviani, F., Mura, M.S., Rossetti, B., Caramello, P., Orofino, G.C., Sciandra, M., Bassetti, M., Londero, A., Pellizzer, G., Manfrin, V., and d'Arminio Monforte, A.

Published
2017
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46. Sepharose-bound, highly sulfated glycosaminoglycans can capture HIV-1 from culture medium

Author

Curatella B, Bartolini B., Di Caro A., Cavallaro R.A., Liverani L., Mascellani G., Benedetto A., Castilletti C., Capobianchi M.R., and Cellai L.

Abstract

In the search for new strategies against HIV-1 and on the basis of a number of previous studies reporting on the capacity of certain polyanionic compounds to influence the replication of HIV-1, we prepared a few chemically oversulfated dermatan and chondroitin sulfates. Four of these compounds and two samples of heparin were bound to activated Sepharose through either their carboxylic groups, or their aldehydic groups, or their deacetylated primary amino groups. Some of these so-derivatised resins, packed into columns, proved able to remove HIV-1 IIIB, a laboratory adapted strain, and one clinical primary isolate from an AIDS patient, from infected cell culture medium. The resins bind the virus very tightly and could be useful for capturing the virus from infected fluids.

Published
2005

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