307 results on '"Campbell ID"'
Search Results
2. An integrin phosphorylation switch: the effect of beta3 integrin tail phosphorylation on Dok1 and talin binding
- Author
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Oxley, CL, Anthis, NJ, Lowe, ED, Vakonakis, I, Campbell, ID, and Wegener, KL
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macromolecular substances - Abstract
Integrins play a fundamental role in cell migration and adhesion; knowledge of how they are regulated and controlled is vital for understanding these processes. Recent work showed that Dok1 negatively regulates integrin activation, presumably by competition with talin. To understand how this occurs, we used NMR spectroscopy and x-ray crystallography to investigate the molecular details of interactions with integrins. The binding affinities of beta3 integrin tails for the Dok1 and talin phosphotyrosine binding domains were quantified using 15N-1H hetero-nuclear single quantum correlation titrations, revealing that the unphosphorylated integrin tail binds more strongly to talin than Dok1. Chemical shift mapping showed that unlike talin, Dok1 exclusively interacts with the canonical NPXY motif of the beta3 integrin tail. Upon phosphorylation of Tyr 747 in the beta3 integrin tail, however, Dok1 then binds much more strongly than talin. Thus, we show that phosphorylation of Tyr 747 provides a switch for integrin ligand binding. This switch may represent an in vivo mechanism for control of integrin receptor activation. These results have implications for the control of integrin signaling by proteins containing phosphotyrosine binding domains.
- Published
- 2016
3. Bacillus subtilis mutations that alter the pathway of phosphorylation of the anti-anti-sigmaF factor SpoIIAA lead to a Spo- phenotype
- Author
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Lee, CS, Clarkson, J, Shu, JC, Campbell, ID, and Yudkin, MD
- Subjects
fungi - Abstract
Sigma-F, the first sporulation-specific transcription factor of Bacillus subtilis, is regulated by an anti-sigma factor SpoIIAB, which can also act as a protein kinase that phosphorylates the anti-anti-sigma factor SpoIIAA. The time course of phosphorylation reaction is biphasic, a fact that has been interpreted in terms of a mechanism for sequestering SpoIIAB away from sigmaF and thus allowing activation of sigmaF when needed. Site-directed mutagenesis of SpoIIAA has allowed us to isolate two mutants that cannot activate sigmaF and which are therefore Spo-. The two mutant SpoIIAA proteins, SpoIIAAL61A and SpoIIAAL90A, are phosphorylated with linear kinetics; in addition they are less able to form the stable non-covalent complex that wild-type SpoIIAA makes with SpoIIAB in the presence of ADP. The phosphorylated form of SpoIIAAL90A was hydrolysed by the specific phosphatase SpoIIE at the same rate as wild-type SpoIIAA-P, but the rate of hydrolysis of SpoIIAAL61A-P was much slower. The secondary structure and the global fold of the mutant proteins were unchanged from the wild type. The results are interpreted in terms of a model for the wild type in which SpoIIAB, after phosphorylating SpoIIAA, is released in a form that is tightly bound to ADP and which then makes a ternary complex with an unreacted SpoIIAA. We propose that it is the inability to make this ternary complex that deprives the mutant cells of a means of keeping SpoIIAB from inhibiting sigmaF.
- Published
- 2016
4. Backbone dynamics of a cbEGF domain pair in the presence of calcium
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Werner, JM, Knott, V, Handford, PA, Campbell, ID, and Downing, AK
- Abstract
Calcium binding (cb) epidermal growth factor-like (EGF) domains are found in a wide variety of extracellular proteins with diverse functions. In several proteins, including the fibrillins (1 and 2), the low-density lipoprotein receptor, the Notch receptor and related molecules, these domains are organised as multiple tandem repeats. The functional importance of calcium-binding by EGF domains has been underscored by the identification of missense mutations associated with defective calcium-binding, which have been linked to human diseases. Here, we present (15)N backbone relaxation data for a pair of cbEGF domains from fibrillin-1, the defective protein in the Marfan syndrome. The data were best fit using a symmetric top model, confirming the extended conformation of the cbEGF domain pair. Our data demonstrate that calcium plays a key role in stabilising the rigidity of the domain pair on the pico- to millisecond time-scale. Strikingly, the most dynamically stable region of the construct is centred about the domain interface. These results provide important insight into the properties of intact fibrillin-1, the consequences of Marfan syndrome causing mutations, and the ultrastructure of fibrillins and other extracellular matrix proteins.
- Published
- 2016
5. Analysis of CD44 hyaluronan-binding domain mutants by NMR
- Author
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Wright, AJ, Banerji, S, Noble, M, Jackson, DG, Campbell, ID, and Day, AJ
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British Society for Matrix Biology Meeting, Manchester, 5–6 April 2004 - Published
- 2004
6. The histochemical quantitation proliferation of invasive breast carcinomas after in vivo bromodeoxyuridine labelling
- Author
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Rew, DA, primary, Ashton-Key, M, additional, Campbell, ID, additional, and Taylor, I, additional
- Published
- 1992
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7. National Breast Cancer Audit: overview of invasive breast cancer in New Zealand.
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Ooi CW, Campbell ID, Kollias J, and de Silva P
- Published
- 2012
8. Community action and capacity for support and change in response to HIV/AIDS.
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Campbell ID and Rader AD
- Published
- 1995
9. Hospital Sterile Supplies
- Author
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Gordon Ar, Gillingham Fj, Campbell Id, and Bowie Jh
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Operating Rooms ,Engineering ,General Articles and News ,business.industry ,Infertility ,General Engineering ,General Earth and Planetary Sciences ,Antisepsis ,Housekeeping, Hospital ,General Medicine ,business ,Equipment and Supplies, Hospital ,General Environmental Science - Published
- 1963
10. The Decay of Irradiation Defects in Dyed Polymethyl Methacrylate.
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Campbell, ID and Looney, FD
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- 1963
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11. An arsenic-75 nuclear quadrupole resonance study of a and b As4S3.
- Author
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Bastow, TJ, Campbell, ID, and Whitfield, HJ
- Abstract
The nuclear quadrupole resonance frequencies of 75As in the α and β forms of As4S3 have been measured at 77, 195, and 293 K. The frequencies at 77 K were: α phase 64.87 65.94 79.56 MHz β phase 65.42 67.16 79.65 MHz An analysis is presented in terms of Townes-Dailey theory and of the temperature dependence in terms of Bayer-Brown theory. The differences in frequencies of the α and β forms were attributed to the effect of electrostatic field gradients, estimated by lattice sums. Allowance must be made for the thermal expansion of the lattice to obtain a consistent interpretation.
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- 1972
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12. N.m.r. study of the dehydration of sodium bromide dihydrate.
- Author
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Campbell, ID and Mackey, DJ
- Abstract
The dehydration of polycrystalline NaBr,2H2O is studied by observing the proton, sodium, and bromine nuclear magnetic resonances. Fully hydrated samples and samples which have been partly vacuum-dehydrated show the same behaviour. As the sample is gradually warmed from room temperature water is evolved more and more freely until at 50.8C complete dehydration occurs. However, the proton resonance results indicate little, if any, preliminary reorientation or migration of the water molecule through the lattice, as this increasingly rapid loss of water occurs. With each stage of vacuum dehydration the sodium and bromine resonances, which are sensitive indicators of the anhydrous cubic phase, increase steadily in intensity. The observations are consistent with the classical mechanism of vacuum dehydration proceeding inwards from the surface of the crystallite. The outer layers are completely converted into the cubic phase while the interior of the crystallite is unaffected.
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- 1971
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13. Biological Magnetic Resonance. Volume 4
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Campbell, ID, primary
- Published
- 1983
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14. Mobility and Function in Proteins and Nucleic Acids
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Campbell, ID, primary
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- 1983
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15. The Decay of Irradiation Defects in Polymethyl Methacrylate
- Author
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Campbell, ID, primary and Looney, FD, additional
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- 1962
- Full Text
- View/download PDF
16. An arsenic-75 nuclear quadrupole resonance study of α and β As4S3
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Bastow, TJ, primary, Campbell, ID, additional, and Whitfield, HJ, additional
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- 1972
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17. A shining light in the New Zealand cancer gloom.
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Campbell ID
- Published
- 2012
18. Radiation doses and fractionation schedules in non-low-risk ductal carcinoma in situ in the breast (BIG 3-07/TROG 07.01): a randomised, factorial, multicentre, open-label, phase 3 study.
- Author
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Chua BH, Link EK, Kunkler IH, Whelan TJ, Westenberg AH, Gruber G, Bryant G, Ahern V, Purohit K, Graham PH, Akra M, McArdle O, O'Brien P, Harvey JA, Kirkove C, Maduro JH, Campbell ID, Delaney GP, Martin JD, Vu TTT, Muanza TM, Neal A, and Olivotto IA
- Subjects
- Canada, Dose Fractionation, Radiation, Female, Humans, Mastectomy, Segmental, Neoplasm Recurrence, Local etiology, Neoplasm Staging, Radiation Dosage, Breast Neoplasms etiology, Breast Neoplasms radiotherapy, Breast Neoplasms surgery, Carcinoma, Intraductal, Noninfiltrating radiotherapy, Carcinoma, Intraductal, Noninfiltrating surgery
- Abstract
Background: Whole breast irradiation (WBI) after conservative surgery for ductal carcinoma in situ (DCIS) reduces local recurrence. We investigated whether a tumour bed boost after WBI improved outcomes, and examined radiation dose fractionation sensitivity for non-low-risk DCIS., Methods: The study was an international, randomised, unmasked, phase 3 trial involving 136 participating centres of six clinical trials organisations in 11 countries (Australia, New Zealand, Singapore, Canada, the Netherlands, Belgium, France, Switzerland, Italy, Ireland, and the UK). Eligible patients were women aged 18 years or older with unilateral, histologically proven, non-low-risk DCIS treated by breast-conserving surgery with at least 1 mm of clear radial resection margins. They were assigned to one of four groups (1:1:1:1) of no tumour bed boost versus boost after conventional versus hypofractionated WBI, or randomly assigned to one of two groups (1:1) of no boost versus boost after each centre prespecified conventional or hypofractionated WBI. The conventional WBI used was 50 Gy in 25 fractions, and hypofractionated WBI was 42·5 Gy in 16 fractions. A boost dose of 16 Gy in eight fractions, if allocated, was delivered after WBI. Patients and clinicians were not masked to treatment allocation. The primary endpoint was time to local recurrence. This trial is registered with ClinicalTrials.gov (NCT00470236)., Findings: Between June 25, 2007, and June 30, 2014, 1608 patients were randomly assigned to have no boost (805 patients) or boost (803 patients). Conventional WBI was given to 831 patients, and hypofractionated WBI was given to 777 patients. Median follow-up was 6·6 years. The 5-year free-from-local-recurrence rates were 92·7% (95% CI 90·6-94·4%) in the no-boost group and 97·1% (95·6-98·1%) in the boost group (hazard ratio 0·47; 0·31-0·72; p<0·001). The boost group had higher rates of grade 2 or higher breast pain (10% [8-12%] vs 14% [12-17%], p=0·003) and induration (6% [5-8%] vs 14% [11-16%], p<0·001)., Interpretation: In patients with resected non-low-risk DCIS, a tumour bed boost after WBI reduced local recurrence with an increase in grade 2 or greater toxicity. The results provide the first randomised trial data to support the use of boost radiation after postoperative WBI in these patients to improve local control. The international scale of the study supports the generalisability of the results., Funding: National Health and Medical Research Council of Australia, Susan G Komen for the Cure, Breast Cancer Now, OncoSuisse, Dutch Cancer Society, Canadian Cancer Trials Group., Competing Interests: Declaration of interests BHC reports research grants from National Health and Medical Research Council, Susan G Komen for the Cure, Breast Cancer Now, and OncoSuisse Swiss Federation Against Cancer to support the submitted work at Trans-Tasman Oncology Group (Newcastle, NSW, Australia), Centre for Biostatistics and Clinical Trials of Peter MacCallum Cancer Centre (Melbourne, VIC, Australia), and participating cooperative trials groups and sites; and in kind support from Veracyte and NanoString for biomarker testing, outside the submitted work. IHK and AHW report research grants to support the submitted work at the UK Trial Centre, University of Edinburgh (Breast Cancer Now); and research funding from the Dutch Cancer Society to support the submitted work in the Netherlands. TJW reports research funding and non-direct financial support for biomarker testing from Exact Sciences and Genomic Health for ongoing studies. All other authors declare no competing interests., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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19. Use of Non-Cancer Medications in New Zealand Women at the Diagnosis of Primary Invasive Breast Cancer: Prevalence, Associated Factors and Effects on Survival.
- Author
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Aye PS, Scott OW, Elwood JM, Sarfati D, Lawrenson R, Campbell ID, Kuper-Hommel M, and Tin Tin S
- Subjects
- Adult, Aged, Aged, 80 and over, Ethnicity, Female, Humans, Middle Aged, New Zealand epidemiology, Prevalence, Young Adult, Breast Neoplasms diagnosis, Breast Neoplasms drug therapy, Breast Neoplasms epidemiology, Drug Therapy, Registries
- Abstract
Background: Assessing the use of multiple medications in cancer patients is crucial as such use may affect cancer outcomes. This study reports the prevalence of non-cancer medication use at breast cancer diagnosis, its associated factors, and its effect on survival., Methods: We identified all women diagnosed with primary invasive breast cancer between 1 January 2007 and 31 December 2016, from four population-based breast cancer registries, in Auckland, Waikato, Wellington, and Christchurch, New Zealand. Through linkage to the pharmaceutical records, we obtained information on non-cancer medications that were dispensed for a minimum of 90 days' supply between one year before cancer diagnosis and first cancer treatment. We performed ordered logistic regressions to identify associated factors and Cox regressions to investigate its effect on patient survival., Results: Of 14,485 patients, 52% were dispensed at least one drug (mean-1.3 drugs; maximum-13 drugs), with a higher prevalence observed in patients who were older, treated at a public facility, more economically deprived, and screen-detected. The use of 2-3 drugs showed a reduced non-breast cancer mortality (HR = 0.75, 95%CI = 0.60-0.92) in previously hospitalised patients, with other groups showing non-significant associations when adjusted for confounding factors. Drug use was not associated with changes in breast cancer-specific mortality., Conclusions: Non-cancer medication use at breast cancer diagnosis was common in New Zealand, more prevalent in older and disadvantaged women, and showed no effect on breast cancer-specific mortality, but a reduction in other cause mortality with the use of 2-3 drugs.
- Published
- 2020
- Full Text
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20. International comparison of cosmetic outcomes of breast conserving surgery and radiation therapy for women with ductal carcinoma in situ of the breast.
- Author
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Olivotto IA, Link E, Phillips C, Whelan TJ, Bryant G, Kunkler IH, Westenberg AH, Purohit K, Ahern V, Graham PH, Akra M, McArdle O, Ludbrook JJ, Harvey JA, Maduro JH, Kirkove C, Gruber G, Martin JD, Campbell ID, Delaney GP, and Chua BH
- Subjects
- Adult, Aged, Aged, 80 and over, Breast Neoplasms pathology, Carcinoma, Ductal, Breast pathology, Dose Fractionation, Radiation, Female, Humans, Mastectomy, Segmental standards, Middle Aged, Randomized Controlled Trials as Topic, Breast Neoplasms radiotherapy, Breast Neoplasms surgery, Carcinoma in Situ radiotherapy, Carcinoma in Situ surgery, Carcinoma, Ductal, Breast radiotherapy, Carcinoma, Ductal, Breast surgery, Mastectomy, Segmental methods
- Abstract
Purpose: To assess the cosmetic impact of breast conserving surgery (BCS), whole breast irradiation (WBI) fractionation and tumour bed boost (TBB) use in a phase III trial for women with ductal carcinoma in situ (DCIS) of the breast., Materials and Methods: Baseline and 3-year cosmesis were assessed using the European Organization for Research and Treatment of Cancer (EORTC) Cosmetic Rating System and digital images in a randomised trial of non-low risk DCIS treated with postoperative WBI +/- TBB. Baseline cosmesis was assessed for four geographic clusters of treating centres. Cosmetic failure was a global score of fair or poor. Cosmetic deterioration was a score change from excellent or good at baseline to fair or poor at three years. Odds ratios for cosmetic deterioration by WBI dose-fractionation and TBB use were calculated for both scoring systems., Results: 1608 women were enrolled from 11 countries between 2007 and 2014. 85-90% had excellent or good baseline cosmesis independent of geography or assessment method. TBB (16 Gy in 8 fractions) was associated with a >2-fold risk of cosmetic deterioration (p < 0.001). Hypofractionated WBI (42.5 Gy in 16 fractions) achieved statistically similar 3-year cosmesis compared to conventional WBI (50 Gy in 25 fractions) (p ≥ 0.18). The adverse impact of a TBB was not significantly associated with WBI fractionation (interaction p ≥ 0.30)., Conclusions: Cosmetic failure from BCS was similar across international jurisdictions. A TBB of 16 Gy increased the rate of cosmetic deterioration. Hypofractionated WBI achieved similar 3-year cosmesis as conventional WBI in women treated with BCS for DCIS., Competing Interests: Declaration of Competing Interest All authors declare no commercial conflicts of interests other than per capita or grant funding to their institutions for patient accrual. The funding bodies had no role in the analysis or reporting of results and did not review or edit the text of the manuscript., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2020
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21. The Integrin Receptor in Biologically Relevant Bilayers: Insights from Molecular Dynamics Simulations.
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Kalli AC, Rog T, Vattulainen I, Campbell ID, and Sansom MSP
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- Amino Acid Motifs, Binding Sites, Cholesterol chemistry, Humans, Phosphatidylcholines chemistry, Phosphatidylethanolamines chemistry, Phosphatidylserines chemistry, Protein Binding, Protein Conformation, alpha-Helical, Protein Conformation, beta-Strand, Protein Interaction Domains and Motifs, Protein Multimerization, Protein Structure, Tertiary, Sequence Homology, Amino Acid, Thermodynamics, Integrin alphaVbeta3 chemistry, Lipid Bilayers chemistry, Molecular Dynamics Simulation, Platelet Glycoprotein GPIIb-IIIa Complex chemistry, Protein Subunits chemistry, Talin chemistry
- Abstract
Integrins are heterodimeric (αβ) cell surface receptors that are potential therapeutic targets for a number of diseases. Despite the existence of structural data for all parts of integrins, the structure of the complete integrin receptor is still not available. We have used available structural data to construct a model of the complete integrin receptor in complex with talin F2-F3 domain. It has been shown that the interactions of integrins with their lipid environment are crucial for their function but details of the integrin/lipid interactions remain elusive. In this study an integrin/talin complex was inserted in biologically relevant bilayers that resemble the cell plasma membrane containing zwitterionic and charged phospholipids, cholesterol and sphingolipids to study the dynamics of the integrin receptor and its effect on bilayer structure and dynamics. The results of this study demonstrate the dynamic nature of the integrin receptor and suggest that the presence of the integrin receptor alters the lipid organization between the two leaflets of the bilayer. In particular, our results suggest elevated density of cholesterol and of phosphatidylserine lipids around the integrin/talin complex and a slowing down of lipids in an annulus of ~30 Å around the protein due to interactions between the lipids and the integrin/talin F2-F3 complex. This may in part regulate the interactions of integrins with other related proteins or integrin clustering thus facilitating signal transduction across cell membranes.
- Published
- 2017
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22. Influence of comorbidity on chemotherapy use for early breast cancer: systematic review and meta-analysis.
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Edwards MJ, Campbell ID, Lawrenson RA, and Kuper-Hommel MJ
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- Antineoplastic Agents adverse effects, Breast Neoplasms mortality, Breast Neoplasms pathology, Chemotherapy, Adjuvant, Chi-Square Distribution, Comorbidity, Female, Humans, Odds Ratio, Predictive Value of Tests, Risk Factors, Treatment Outcome, Antineoplastic Agents therapeutic use, Breast Neoplasms drug therapy, Early Detection of Cancer
- Abstract
Purpose: Patients with early breast cancer and coexistent comorbidities generally experience worse prognosis which may be in part related to inferior treatment. Randomised data on chemotherapy use and tolerance in comorbid patients are limited. We aimed to review the available literature regarding the use of chemotherapy in such patients., Methods: A systematic search of databases was performed for English-language articles evaluating the impact of comorbidity on chemotherapy use for early breast cancer. Comorbidity was assessed as a specific condition, summary count or index. Outcomes of interest were receipt of chemotherapy, change in chemotherapy delivery and occurrence of toxicity., Results: Sixty studies met inclusion criteria for systematic review. Thirty-three studies evaluated receipt of chemotherapy, with 19 reporting reduced treatment, particularly with higher levels of comorbidity. Meta-analysis of 10 eligible studies returned odds ratios (OR's) of 0.88 [95% confidence interval (CI) 0.80-0.96] and 0.63 (95% CI 0.49-0.80) for receipt of chemotherapy by patients with comorbidity scores of 1 and ≥2, respectively, compared with no comorbidity. Comorbidity had a generally adverse impact on the quality of chemotherapy delivery, although outcomes were heterogeneous. Toxicity was greater in patients with comorbidity, with 10 out of 13 studies reporting greater odds of toxicity or hospitalisation during chemotherapy. Meta-analysis of three studies addressing chemotherapy-associated hospitalisation produced OR's of 1.42 (95% CI 1.20-1.67) and 2.23 (95% CI 1.46-3.39) for comorbidity scores of 1 and ≥2, respectively., Conclusions: Compared with their non-comorbid counterparts, comorbid patients with early breast cancer receive less quality adjuvant chemotherapy and experience greater toxicity.
- Published
- 2017
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23. Breast cancer survival in New Zealand women.
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Campbell ID, Scott N, Seneviratne S, Kollias J, Walters D, Taylor C, Webster F, Zorbas H, and Roder DM
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- Adult, Aged, Aged, 80 and over, Breast Neoplasms pathology, Female, Humans, Middle Aged, Neoplasm Grading, Neoplasm Invasiveness, Neoplasm Staging, New Zealand epidemiology, Poverty, Registries, Risk Factors, Survival Analysis, Breast Neoplasms ethnology, Breast Neoplasms mortality
- Abstract
Background: The Quality Audit (BQA) of Breast Surgeons of Australia and New Zealand includes a broad range of data and is the largest New Zealand (NZ) breast cancer (BC) database outside the NZ Cancer Registry. We used BQA data to compare BC survival by ethnicity, deprivation, remoteness, clinical characteristic and case load., Methods: BQA and death data were linked using the National Health Index. Disease-specific survival for invasive cases was benchmarked against Australian BQA data and NZ population-based survivals. Validity was explored by comparison with expected survival by risk factor., Results: Compared with 93% for Australian audit cases, 5-year survival was 90% for NZ audit cases overall, 87% for Maori, 84% for Pacific and 91% for other., Conclusions: BC survival in NZ appears lower than in Australia, with inequities by ethnicity. Differences may be due to access, timeliness and quality of health services, patient risk profiles, BQA coverage and death-record methodology., (© 2014 Royal Australasian College of Surgeons.)
- Published
- 2015
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24. Risk factors associated with mortality from breast cancer in Waikato, New Zealand: a case-control study.
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Seneviratne SA, Campbell ID, Scott N, Lawrenson RA, Shirley R, and Elwood JM
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- Aged, Breast Neoplasms diagnosis, Breast Neoplasms pathology, Case-Control Studies, Delayed Diagnosis, Female, Humans, Middle Aged, Neoplasm Staging, New Zealand epidemiology, Registries, Risk Assessment, Risk Factors, Breast Neoplasms ethnology, Breast Neoplasms mortality, Health Status Disparities, Native Hawaiian or Other Pacific Islander statistics & numerical data, White People statistics & numerical data
- Abstract
Objectives: The aim of this study is to identify key characteristics associated with mortality from breast cancer among women with newly diagnosed breast cancer in New Zealand (NZ)., Study Design: Case-control study., Methods: All primary breast cancers diagnosed between 01/01/2002 and 31/12/2010 in Waikato, NZ, were identified from the Waikato Breast Cancer Register. A total of 258 breast cancer deaths were identified from 1767 invasive cancers diagnosed over this period., Results: Breast cancer deaths (n = 246) were compared with an age and year of diagnosis matched control group (n = 652) who were alive at the time of the death of the corresponding case and subsequently did not die from breast cancer. Diagnosis through symptomatic presentation, advanced stage, higher grade, absent hormone receptors (i.e. oestrogen and progesterone) and HER-2 amplification were associated with significantly higher risks of breast cancer mortality in bivariate analysis. Tumour stage, grade and hormone receptor status remained significant in the multivariable model, while mode of detection and HER-2 status were non-significant. In the bivariate analysis, Māori women had a higher risk of breast cancer mortality compared to NZ European women (OR 1.34) which was statistically non-significant. However in the adjusted model, risk of mortality was lower for Māori compared to NZ European women, although this was not significant statistically (OR 0.85)., Conclusions: Mortality pattern from breast cancer in this study were associated with established risk factors. Ethnic inequity in breast cancer mortality in NZ appears to be largely attributable to delay in diagnosis and tumour related factors. Further research in a larger cohort is needed to identify the full impact of these factors on ethnic inequity in breast cancer mortality., (Copyright © 2015 The Royal Society for Public Health. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2015
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25. Analysing risk factors for poorer breast cancer outcomes in residents of lower socioeconomic areas of Australia.
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Roder D, Zorbas HM, Kollias J, Pyke CM, Walters D, Campbell ID, Taylor C, and Webster F
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- Adult, Aged, Aged, 80 and over, Analysis of Variance, Australia epidemiology, Breast Neoplasms economics, Breast Neoplasms ethnology, Female, Humans, Middle Aged, Native Hawaiian or Other Pacific Islander statistics & numerical data, Risk Factors, Survival Rate, Breast Neoplasms therapy, Health Services Accessibility economics, Health Status Disparities, Outcome Assessment, Health Care economics, Social Class
- Abstract
Objective: To investigate patient, cancer and treatment factors associated with the residence of female breast cancer patients in lower socioeconomic areas of Australia to better understand factors that may contribute to their poorer cancer outcomes., Methods: Bivariable and multivariable analyses were performed using the Breast Quality Audit database of Breast Surgeons of Australia and New Zealand. RESULTS Multivariable regression indicated that patients from lower socioeconomic areas are more likely to live in more remote areas and to be treated at regional than major city centres. Although they appeared equally likely to be referred to surgeons from BreastScreen services as patients from higher socioeconomic areas, they were less likely to be referred as asymptomatic cases from other sources. In general, their cancer and treatment characteristics did not differ from those of women from higher socioeconomic areas, but ovarian ablation therapy was less common for these patients and bilateral synchronous lesions tended to be less frequent than for women from higher socioeconomic areas., Conclusions: The results indicate that patients from lower socioeconomic areas are more likely to live in more remote districts and have their treatment in regional rather than major treatment centres. Their cancer and treatment characteristics appear to be similar to those of women from higher socioeconomic areas, although they are less likely to have ovarian ablation or to be referred as asymptomatic patients from sources other than BreastScreen. What is known about this topic? It is already known from Australian data that breast cancer outcomes are not as favourable for women from areas of socioeconomic disadvantage. The reasons for the poorer outcomes have not been understood. Studies in other countries have also found poorer outcomes in women from lower socioeconomic areas, and in some instances, have attributed this finding to more advanced stages of cancers at diagnosis and more limited treatment. The reasons are likely to vary with the country and health system characteristics. What does this paper add? The present study found that in Australia, women from lower socioeconomic areas do not have more advanced cancers at diagnosis, nor, in general, other cancer features that would predispose them to poorer outcomes. The standout differences were that they tended more to live in areas that were more remote from specialist metropolitan centres and were more likely to be treated in regional settings where prior research has indicated poorer outcomes. The reasons for these poorer outcomes are not known but may include lower levels of surgical specialisation, less access to specialised adjunctive services, and less involvement with multidisciplinary teams. Women from lower socioeconomic areas also appeared more likely to attend lower case load surgeons. Little difference was evident in the type of clinical care received, although women from lower socioeconomic areas were less likely to be asymptomatic referrals from other clinical settings (excluding BreastScreen). What are the implications for practitioners? Results suggest that poorer outcomes in women from lower socioeconomic areas in Australia may have less to do with the characteristics of their breast cancers or treatment modalities and more to do with health system features, such as access to specialist centres. This study highlights the importance of demographic and health system features as potentially key factors in service outcomes. Health system research should be strengthened in Australia to augment biomedical and clinical research, with a view to best meeting service needs of all sectors of the population.
- Published
- 2014
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26. Conformational changes in talin on binding to anionic phospholipid membranes facilitate signaling by integrin transmembrane helices.
- Author
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Kalli AC, Campbell ID, and Sansom MS
- Subjects
- Integrins metabolism, Phospholipids metabolism, Protein Structure, Tertiary, Talin metabolism, Integrins chemistry, Molecular Dynamics Simulation, Phospholipids chemistry, Talin chemistry
- Abstract
Integrins are heterodimeric (αβ) cell surface receptors that are activated to a high affinity state by the formation of a complex involving the α/β integrin transmembrane helix dimer, the head domain of talin (a cytoplasmic protein that links integrins to actin), and the membrane. The talin head domain contains four sub-domains (F0, F1, F2 and F3) with a long cationic loop inserted in the F1 domain. Here, we model the binding and interactions of the complete talin head domain with a phospholipid bilayer, using multiscale molecular dynamics simulations. The role of the inserted F1 loop, which is missing from the crystal structure of the talin head, PDB:3IVF, is explored. The results show that the talin head domain binds to the membrane predominantly via cationic regions on the F2 and F3 subdomains and the F1 loop. Upon binding, the intact talin head adopts a novel V-shaped conformation which optimizes its interactions with the membrane. Simulations of the complex of talin with the integrin α/β TM helix dimer in a membrane, show how this complex promotes a rearrangement, and eventual dissociation of, the integrin α and β transmembrane helices. A model for the talin-mediated integrin activation is proposed which describes how the mutual interplay of interactions between transmembrane helices, the cytoplasmic talin protein, and the lipid bilayer promotes integrin inside-out activation.
- Published
- 2013
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27. Characterization of 14-3-3-ζ Interactions with integrin tails.
- Author
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Bonet R, Vakonakis I, and Campbell ID
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- Crystallography, X-Ray, Cytoplasm metabolism, Paxillin metabolism, Phosphorylation, Protein Binding, Protein Interaction Domains and Motifs, Talin chemistry, Talin metabolism, 14-3-3 Proteins chemistry, 14-3-3 Proteins metabolism, Integrin alpha4 chemistry, Integrin alpha4 metabolism, Integrin beta Chains chemistry, Integrin beta Chains metabolism
- Abstract
Integrins are a family of heterodimeric (α+β) adhesion receptors that play key roles in many cellular processes. Integrins are unusual in that their functions can be modulated from both outside and inside the cell. Inside-out signaling is mediated by binding adaptor proteins to the flexible cytoplasmic tails of the α- and β-integrin subunits. Talin is one well-known intracellular activator, but various other adaptors bind to integrin tails, including 14-3-3-ζ, a member of the 14-3-3 family of dimeric proteins that have a preference for binding phosphorylated sequence motifs. Phosphorylation of a threonine in the β2 integrin tail has been shown to modulate β2/14-3-3-ζ interactions, and recently, the α4 integrin tail was reported to bind to 14-3-3-ζ and associate with paxillin in a ternary complex that is regulated by serine phosphorylation. Here, we use a range of biophysical techniques to characterize interactions between 14-3-3-ζ and the cytoplasmic tails of α4, β1, β2 and β3 integrins. The X-ray structure of the 14-3-3-ζ/α4 complex indicates a canonical binding mode for the α4 phospho-peptide, but unexpected features are also observed: residues outside the consensus 14-3-3-ζ binding motif are shown to be essential for an efficient interaction; in contrast, a short β2 phospho-peptide is sufficient for high-affinity binding to 14-3-3-ζ. In addition, we report novel 14-3-3-ζ/integrin tail interactions that are independent of phosphorylation. Of the integrin tails studied, the strongest interaction with 14-3-3-ζ is observed for the β1A variant. In summary, new insights about 14-3-3-ζ/integrin tail interactions that have implications for the role of these molecular associations in cells are described., (Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2013
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28. Talins and kindlins: partners in integrin-mediated adhesion.
- Author
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Calderwood DA, Campbell ID, and Critchley DR
- Subjects
- Animals, Cell Adhesion genetics, Cell Communication physiology, Humans, Integrins metabolism, Membrane Proteins genetics, Membrane Proteins metabolism, Models, Biological, Multigene Family physiology, Neoplasm Proteins genetics, Neoplasm Proteins metabolism, Protein Binding physiology, Talin genetics, Talin metabolism, Cell Communication genetics, Integrins physiology, Membrane Proteins physiology, Neoplasm Proteins physiology, Talin physiology
- Abstract
Integrin receptors provide a dynamic, tightly-regulated link between the extracellular matrix (or cellular counter-receptors) and intracellular cytoskeletal and signalling networks, enabling cells to sense and respond to their chemical and physical environment. Talins and kindlins, two families of FERM-domain proteins, bind the cytoplasmic tail of integrins, recruit cytoskeletal and signalling proteins involved in mechanotransduction and synergize to activate integrin binding to extracellular ligands. New data reveal the domain structure of full-length talin, provide insights into talin-mediated integrin activation and show that RIAM recruits talin to the plasma membrane, whereas vinculin stabilizes talin in cell-matrix junctions. How kindlins act is less well-defined, but disease-causing mutations show that kindlins are also essential for integrin activation, adhesion, cell spreading and signalling.
- Published
- 2013
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29. Structural analysis of collagen type I interactions with human fibronectin reveals a cooperative binding mode.
- Author
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Erat MC, Sladek B, Campbell ID, and Vakonakis I
- Subjects
- Amino Acid Sequence, Humans, Hydrophobic and Hydrophilic Interactions, Models, Molecular, Molecular Sequence Data, Nuclear Magnetic Resonance, Biomolecular, Protein Binding, Protein Interaction Domains and Motifs, Protein Stability, Protein Structure, Quaternary, Protein Structure, Secondary, Solutions, Tomography, X-Ray Computed, Collagen Type I chemistry, Fibronectins chemistry
- Abstract
Despite its biological importance, the interaction between fibronectin (FN) and collagen, two abundant and crucial tissue components, has not been well characterized on a structural level. Here, we analyzed the four interactions formed between epitopes of collagen type I and the collagen-binding fragment (gelatin-binding domain (GBD)) of human FN using solution NMR, fluorescence, and small angle x-ray scattering methods. Collagen association with FN modules (8-9)FnI occurs through a conserved structural mechanism but exhibits a 400-fold disparity in affinity between collagen sites. This disparity is reduced in the full-length GBD, as (6)FnI(1-2)FnII(7)FnI binds a specific collagen epitope next to the weakest (8-9)FnI-binding site. The cooperative engagement of all GBD modules with collagen results in four broadly equipotent FN-collagen interaction sites. Collagen association stabilizes a distinct monomeric GBD conformation in solution, giving further evidence to the view that FN fragments form well defined functional and structural units.
- Published
- 2013
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30. Biophysical analysis of Kindlin-3 reveals an elongated conformation and maps integrin binding to the membrane-distal β-subunit NPXY motif.
- Author
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Yates LA, Füzéry AK, Bonet R, Campbell ID, and Gilbert RJ
- Subjects
- Amino Acid Sequence, Animals, Biophysical Phenomena, Cytoskeletal Proteins genetics, Cytoskeletal Proteins metabolism, Integrin beta1 metabolism, Magnetic Resonance Spectroscopy, Membrane Proteins chemistry, Membrane Proteins metabolism, Mice, Mutation, Protein Binding, Protein Isoforms chemistry, Protein Isoforms metabolism, Protein Structure, Tertiary, Protein Subunits chemistry, Protein Subunits metabolism, Recombinant Proteins chemistry, Recombinant Proteins metabolism, Scattering, Small Angle, Sf9 Cells, Talin chemistry, Talin metabolism, X-Ray Diffraction, Amino Acid Motifs, Cytoskeletal Proteins chemistry, Integrin beta1 chemistry, Protein Conformation
- Abstract
Kindlin-3, a 75-kDa protein, has been shown to be critical for hemostasis, immunity, and bone metabolism via its role in integrin activation. The Kindlin family is hallmarked by a FERM domain comprised of F1, F2, and F3 subdomains together with an N-terminal F0 domain and a pleckstrin homology domain inserted in the F2 domain. Recombinant Kindlin-3 was cloned, expressed, and purified, and its domain organization was studied by x-ray scattering and other techniques to reveal an extended conformation. This unusual elongated structure is similar to that found in the paralogue Talin head domain. Analytical ultracentrifugation experiments indicated that Kindlin-3 forms a ternary complex with the Talin and β-integrin cytoplasmic tails. NMR showed that Kindlin-3 specifically recognizes the membrane-distal tail NPXY motif in both the β(1A) and β(1D) isoforms, although the interaction is stronger with β(1A). An upstream Ser/Thr cluster in the tails also plays a critical role. Overall these data support current biological, clinical, and mutational data on Kindlin-3/β-tail binding and provide novel insights into the overall conformation and interactions of Kindlin-3.
- Published
- 2012
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31. The C-terminal rod 2 fragment of filamin A forms a compact structure that can be extended.
- Author
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Ruskamo S, Gilbert R, Hofmann G, Jiang P, Campbell ID, Ylänne J, and Pentikäinen U
- Subjects
- CD18 Antigens chemistry, CD18 Antigens genetics, CD18 Antigens metabolism, Cell Adhesion Molecules chemistry, Cell Adhesion Molecules genetics, Cell Adhesion Molecules metabolism, Contractile Proteins genetics, Contractile Proteins metabolism, Cryoelectron Microscopy, Crystallography, X-Ray, Cytoskeletal Proteins chemistry, Cytoskeletal Proteins genetics, Cytoskeletal Proteins metabolism, Dimerization, Filamins, Humans, Ligands, Microfilament Proteins genetics, Microfilament Proteins metabolism, Mutant Proteins chemistry, Mutant Proteins metabolism, Peptide Fragments genetics, Peptide Fragments metabolism, Protein Binding, Protein Conformation, Protein Interaction Domains and Motifs, Receptors, Dopamine D3 chemistry, Receptors, Dopamine D3 genetics, Receptors, Dopamine D3 metabolism, Recombinant Proteins chemistry, Recombinant Proteins metabolism, Scattering, Small Angle, Contractile Proteins chemistry, Microfilament Proteins chemistry, Models, Molecular, Peptide Fragments chemistry
- Abstract
Filamins are large proteins that cross-link actin filaments and connect to other cellular components. The C-terminal rod 2 region of FLNa (filamin A) mediates dimerization and interacts with several transmembrane receptors and intracellular signalling adaptors. SAXS (small-angle X-ray scattering) experiments were used to make a model of a six immunoglobulin-like domain fragment of the FLNa rod 2 (domains 16-21). This fragment had a surprising three-branched structural arrangement, where each branch was made of a tightly packed two-domain pair. Peptides derived from transmembrane receptors and intracellular signalling proteins induced a more open structure of the six domain fragment. Mutagenesis studies suggested that these changes are caused by peptides binding to the CD faces on domains 19 and 21 which displace the preceding domain A-strands (18 and 20 respectively), thus opening the individual domain pairs. A single particle cryo-EM map of a nine domain rod 2 fragment (domains 16-24), showed a relatively compact dimeric particle and confirmed the three-branched arrangement as well as the peptide-induced conformation changes. These findings reveal features of filamin structure that are important for its interactions and mechanical properties.
- Published
- 2012
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32. Survival from breast cancer: an analysis of Australian data by surgeon case load, treatment centre location, and health insurance status.
- Author
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Roder D, de Silva P, Zorbas HM, Kollias J, Malycha PL, Pyke CM, and Campbell ID
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Australia, Child, Female, Humans, Middle Aged, Proportional Hazards Models, Young Adult, Breast Neoplasms, General Surgery, Insurance Coverage, Insurance, Health, Professional Practice Location, Survivors
- Abstract
Objective: Early invasive breast cancer data from the Australian National Breast Cancer Audit were used to compare case fatality by surgeon case load, treatment centre location and health insurance status., Method: Deaths were traced to 31 December 2007, for cancers diagnosed in 1998-2005. Risk of breast cancer death was compared using Cox proportional hazards regression., Results: When adjustment was made for age and clinical risk factors: (i) the relative risk of breast cancer death (95% confidence limit) was lower when surgeons' annual case loads exceeded 20 cases, at 0.87 (0.76, 0.995) for 21-100 cases and 0.83 (0.72, 0.97) for higher case loads. These relative risks were not statistically significant when also adjusting for treatment centre location (P ≥ 0.15); and (ii) compared with major city centres, inner regional centres had a relative risk of 1.32 (1.18, 1.48), but the risk was not elevated for more remote sites at 0.95 (0.74, 1.22). Risk of death was not related to private insurance status., Conclusion: Higher breast cancer mortality in patients treated in inner regional than major city centres and in those treated by surgeons with lower case loads requires further study.
- Published
- 2012
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33. Age effects on survival from early breast cancer in clinical settings in Australia.
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Roder DM, de Silva P, Zorbas HM, Kollias J, Malycha PL, Pyke CM, and Campbell ID
- Subjects
- Adolescent, Adult, Age Factors, Aged, Aged, 80 and over, Australia, Child, Female, Humans, Middle Aged, Multivariate Analysis, Risk Factors, Survival Rate, Young Adult, Breast Neoplasms mortality
- Abstract
Background: The study aim was to determine whether age is an independent risk factor for survival from early invasive breast cancer in contemporary Australian clinical settings., Methods: The study included 31 493 breast cancers diagnosed in 1998-2005. Risk of death from breast cancer was compared by age, without and with adjustment for clinical risk factors, using Cox proportional hazard regression., Results: Risk of breast cancer death was elevated for cancers of larger size, higher grade, positive nodal status, oestrogen receptor negative status, vascular invasion and multiple foci. Ductal lesions presented a higher risk than other lesions. Adjusting for these factors, the relative risk of breast cancer death (95% confidence limits) was lower for 40-49-year-olds at 0.80 (0.66, 0.96) than for the reference category under 40 years, but higher for 70-79-year-olds at 1.64 (1.36, 1.98) and women aged 80 years or more at 2.19 (1.79, 2.69). The risk for 50-69-year-olds and women under 40 years was similar. Risk-factor adjustment reduced the difference in risk between the reference category under 40 years and 40-49-year-olds, largely eliminated the lower relative risk for 50-69-year-olds, and increased the relative risks for women aged 70-79 years and older., Discussion: Survivals in women under 40 and over 70 years of age are poorer than for 40-69-year-olds. Research is needed into the best treatment modalities for younger women and older women with co-morbidity., (© 2012 The Authors. ANZ Journal of Surgery © 2012 Royal Australasian College of Surgeons.)
- Published
- 2012
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34. Model of a six immunoglobulin-like domain fragment of filamin A (16-21) built using residual dipolar couplings.
- Author
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Tossavainen H, Koskela O, Jiang P, Ylänne J, Campbell ID, Kilpeläinen I, and Permi P
- Subjects
- Crystallography, X-Ray, Filamins, Humans, Magnetic Resonance Spectroscopy, Protein Conformation, Contractile Proteins chemistry, Immunoglobulin Fragments chemistry, Microfilament Proteins chemistry, Models, Molecular
- Abstract
Filamins are actin-binding proteins that participate in a wide range of cell functions, including cell morphology, locomotion, membrane protein localization, and intracellular signaling. The three filamin isoforms found in humans, filamins A, B, and C, are highly homologous, and their roles are partly complementary. In addition to actin, filamins interact with dozens of other proteins that have roles as membrane receptors and channels, enzymes, signaling intermediates, and transcription factors. Filamins are composed of an N-terminal actin-binding domain and 24 filamin-type immunoglobulin-like domains (FLN) that form tail-to-tail dimers with their C-terminal FLN domain. Many of the filamin interactions including those for glycoprotein Ibα and integrins have been mapped to the region comprising FLN domains 16-21. Traditionally, FLN domains have been viewed as independent folding units, arranged in a linear chain joined with flexible linkers. Recent structural findings have shown that consecutive FLNs form more intricate superstructures. The crystal structure of filamin A domains 19-21 (FLNa19-21) revealed that domains 20 and 21 fold together and that the domain interaction can be autoregulatory. The solution structure of domains 18-19 showed a similar domain interaction, whereas domain pair 16-17 has a completely different domain packing mode. In this study, we characterize the domain organization of the FLNa domain sextet 16-21 using NMR spectroscopy. A structure model of this 60-kDa protein has been built using residual dipolar coupling restraints. RDCs and (15)N relaxation data have been used to characterize interdomain motions., (© 2012 American Chemical Society)
- Published
- 2012
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35. Adherence to recommended treatments for early invasive breast cancer: decisions of women attending surgeons in the breast cancer audit of Australia and New Zealand.
- Author
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Roder DM, de Silva P, Zorbas HN, Webster F, Kollias J, Pyke CM, and Campbell ID
- Subjects
- Adult, Age Factors, Aged, Aged, 80 and over, Australia, Breast Neoplasms pathology, Female, Health Services Accessibility statistics & numerical data, Humans, Logistic Models, Middle Aged, Multivariate Analysis, New Zealand, Prognosis, Proportional Hazards Models, Breast Neoplasms therapy, Choice Behavior, Treatment Refusal statistics & numerical data
- Abstract
Aim: The study aim was to determine the frequency with which women decline clinicians' treatment recommendations and variations in this frequency by age, cancer and service descriptors., Design: The study included 36,775 women diagnosed with early invasive breast cancer in 1998-2005 and attending Australian and New Zealand breast surgeons. Rate ratios for declining treatment were examined by descriptor, using bilateral and multiple logistic regression analyses. Proportional hazards regression was used in exploratory analyses of associations with breast cancer death., Results: 3.4% of women declined a recommended treatment of some type, ranging from 2.6% for women under 40 years to 5.8% for those aged 80 years or more, and with parallel increases by age presenting for declining radiotherapy (p<0.001) and axillary surgery (p=0.006). Multiple regression confirmed that common predictors of declining various treatments included low surgeon case load, treatment outside major city centres, and older age. Histological features suggesting a favourable prognosis were often predictive of declining various treatments, although reverse findings also applied with women with positive nodal status being more likely to decline a mastectomy and those with larger tumours more likely to decline chemotherapy. While survival analyses lacked statistical power due to small numbers, higher risks of breast cancer death were suggested, after adjusting for age and conventional clinical risk factors, (1) for women not receiving breast surgery for unstated reasons (RR=2.29; p<0.001); and (2) although not approaching statistical significance p≥ 0.200), for women declining radiotherapy (RR=1.22), a systemic therapy (RR1.11), and more specifically, chemotherapy (RR=1.41)., Conclusions: Women have the right to choose their treatments but reasons for declining recommendations require further study to ensure that choices are well informed and clinical outcomes are optimized.
- Published
- 2012
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36. A helix heterodimer in a lipid bilayer: prediction of the structure of an integrin transmembrane domain via multiscale simulations.
- Author
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Kalli AC, Hall BA, Campbell ID, and Sansom MS
- Subjects
- Amino Acid Sequence, Animals, Cell Membrane chemistry, Magnetic Resonance Spectroscopy, Mammals, Models, Molecular, Molecular Sequence Data, Mutation, Protein Multimerization, Protein Stability, Protein Structure, Secondary, Signal Transduction, Computer Simulation, Integrin beta3 chemistry, Lipid Bilayers chemistry, Membrane Proteins chemistry, Platelet Membrane Glycoprotein IIb chemistry
- Abstract
Dimerization of transmembrane (TM) α helices of membrane receptors plays a key role in signaling. We show that molecular dynamics simulations yield models of integrin TM helix heterodimers, which agree well with available NMR structures. We use a multiscale simulation approach, combining coarse-grained and subsequent atomistic simulation, to model the dimerization of wild-type (WT) and mutated sequences of the αIIb and β3 integrin TM helices. The WT helices formed a stable, right-handed dimer with the same helix-helix interface as in the published NMR structure (PDB: 2K9J). In contrast, the presence of disruptive mutations perturbed the interface between the helices, altering the conformational stability of the dimer. The αIIb/β3 interface was more flexible than that of, e.g., glycophorin A. This is suggestive of a role for alternative packing modes of the TM helices in transbilayer signaling., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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37. Assembly of a filamin four-domain fragment and the influence of splicing variant-1 on the structure.
- Author
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Pentikäinen U, Jiang P, Takala H, Ruskamo S, Campbell ID, and Ylänne J
- Subjects
- Contractile Proteins genetics, Contractile Proteins metabolism, Filamins, Humans, Microfilament Proteins genetics, Microfilament Proteins metabolism, Nuclear Magnetic Resonance, Biomolecular, Protein Structure, Secondary, Protein Structure, Tertiary, Structure-Activity Relationship, Alternative Splicing, Contractile Proteins chemistry, Microfilament Proteins chemistry, Models, Molecular
- Abstract
Filamins are scaffold proteins that bind to various proteins, including the actin cytoskeleton, integrin adhesion receptors, and adaptor proteins such as migfilin. Alternative splicing of filamin, largely constructed from 24 Ig-like domains, is thought to have a role in regulating its interactions with other proteins. The filamin A splice variant-1 (FLNa var-1) lacks 41 amino acids, including the last β-strand of domain 19, FLNa(19), and the first β-strand of FLNa(20) that was previously shown to mask a key binding site on FLNa(21). Here, we present a structural characterization of domains 18-21, FLNa(18-21), in the FLNa var-1 as well as its nonspliced counterpart. A model of nonspliced FLNa(18-21), obtained from small angle x-ray scattering data, shows that these four domains form an L-shaped structure, with one arm composed of a pair of domains. NMR spectroscopy reveals that in the splice variant, FLNa(19) is unstructured whereas the other domains retain the same fold as in their canonical counterparts. The maximum dimensions predicted by small angle x-ray scattering data are increased upon migfilin binding in the FLNa(18-21) but not in the splice variant, suggesting that migfilin binding is able to displace the masking β-strand and cause a rearrangement of the structure. Possible function roles for the spliced variants are discussed.
- Published
- 2011
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38. Multiscale simulations suggest a mechanism for integrin inside-out activation.
- Author
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Kalli AC, Campbell ID, and Sansom MS
- Subjects
- Dimerization, Integrin beta3 genetics, Molecular Dynamics Simulation, Mutation genetics, Platelet Membrane Glycoprotein IIb genetics, Cell Membrane metabolism, Integrin beta3 metabolism, Models, Molecular, Multiprotein Complexes metabolism, Platelet Membrane Glycoprotein IIb metabolism, Talin metabolism
- Abstract
Integrins are large cell-surface adhesion receptors that can be activated to a high affinity state by the formation of an intracellular complex between the integrin β-subunit tail, the membrane, and talin. The F2 and F3 subdomains of the talin head play a key role in formation of this complex. Here, activation of the integrin αIIb/β3 dimer by the talin head domain was probed using multiscale molecular dynamics simulations. A number of novel insights emerge from these studies, including (i) the importance of the integrin αIIb subunit F992 and F993 residues in stabilizing the "off" state of the αIIb/β3 dimer, (ii) a crucial role for negatively charged groups in the F2-F3/membrane interaction, (iii) binding of the talin F2-F3 domain to negatively charged lipid headgroups in the membrane induces a reorientation of the β transmembrane (TM) domain, (iv) an increase in the tilt angle of the β TM domain relative to the bilayer normal helps to destabilize the α/β TM interaction and promote a scissor-like movement of the integrin TM helices. These results, combined with various published experimental observations, suggest a model for the mechanism of inside-out activation of integrins by talin.
- Published
- 2011
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39. The tail of integrin activation.
- Author
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Anthis NJ and Campbell ID
- Subjects
- Animals, Humans, Models, Molecular, Phosphorylation, Protein Binding, Talin chemistry, Talin metabolism, Integrins chemistry, Integrins metabolism
- Abstract
Integrins are essential adhesion receptors found on the surfaces of all metazoan cells. As regulators of cell migration and extracellular matrix assembly, these membrane-spanning heterodimers are critical for embryonic development, tissue repair and immune responses. Signals transmitted by integrins from outside to inside the cell promote cell survival and proliferation, but integrin affinity for extracellular ligands can also be controlled by intracellular cues. This bidirectional signaling is mediated by the short cytoplasmic tails of the two integrin subunits. Recent structural and functional studies of various integrin fragments and complexes between the cytoplasmic tails and intracellular proteins, such as talin, have provided new insight into the signaling processes centered around the tails, particularly inside-out integrin activation., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
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40. Integrin structure, activation, and interactions.
- Author
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Campbell ID and Humphries MJ
- Subjects
- Binding Sites genetics, Cations metabolism, Ligands, Integrins chemistry, Integrins metabolism, Models, Molecular, Protein Conformation, Protein Structure, Tertiary, Signal Transduction physiology
- Abstract
Integrins are large, membrane-spanning, heterodimeric proteins that are essential for a metazoan existence. All members of the integrin family adopt a shape that resembles a large "head" on two "legs," with the head containing the sites for ligand binding and subunit association. Most of the receptor dimer is extracellular, but both subunits traverse the plasma membrane and terminate in short cytoplasmic domains. These domains initiate the assembly of large signaling complexes and thereby bridge the extracellular matrix to the intracellular cytoskeleton. To allow cells to sample and respond to a dynamic pericellular environment, integrins have evolved a highly responsive receptor activation mechanism that is regulated primarily by changes in tertiary and quaternary structure. This review summarizes recent progress in the structural and molecular functional studies of this important class of adhesion receptor.
- Published
- 2011
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41. Structural diversity in integrin/talin interactions.
- Author
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Anthis NJ, Wegener KL, Critchley DR, and Campbell ID
- Subjects
- Amino Acid Sequence, Binding Sites genetics, Humans, Integrin beta1 genetics, Models, Molecular, Mutant Proteins chemistry, Mutant Proteins genetics, Mutant Proteins metabolism, Nuclear Magnetic Resonance, Biomolecular, Protein Binding, Protein Interaction Domains and Motifs genetics, Protein Interaction Domains and Motifs physiology, Protein Interaction Mapping, Protein Isoforms chemistry, Protein Isoforms genetics, Protein Isoforms metabolism, Protein Structure, Secondary, Protein Structure, Tertiary, Sequence Homology, Amino Acid, Talin genetics, Integrin beta1 chemistry, Integrin beta1 metabolism, Talin chemistry, Talin metabolism
- Abstract
The adhesion of integrins to the extracellular matrix is regulated by binding of the cytoskeletal protein talin to the cytoplasmic tail of the β-integrin subunit. Structural studies of this interaction have hitherto largely focused on the β3-integrin, one member of the large and diverse integrin family. Here, we employ NMR to probe interactions and dynamics, revealing marked structural diversity in the contacts between β1A, β1D, and β3 tails and the Talin1 and Talin2 isoforms. Coupled with analysis of recent structures of talin/β tail complexes, these studies elucidate the thermodynamic determinants of this heterogeneity and explain why the Talin2/β1D isoforms, which are co-localized in striated muscle, form an unusually tight interaction. We also show that talin/integrin affinity can be enhanced 1000-fold by deleting two residues in the β tail. Together, these studies illustrate how the integrin/talin interaction has been fine-tuned to meet varying biological requirements., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2010
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42. The streptococcal binding site in the gelatin-binding domain of fibronectin is consistent with a non-linear arrangement of modules.
- Author
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Atkin KE, Brentnall AS, Harris G, Bingham RJ, Erat MC, Millard CJ, Schwarz-Linek U, Staunton D, Vakonakis I, Campbell ID, and Potts JR
- Subjects
- Amino Acid Sequence, Binding Sites, Crystallography, X-Ray, Fibronectins chemistry, Fibronectins genetics, Gelatin chemistry, Gelatin genetics, Humans, Magnetic Resonance Spectroscopy, Models, Molecular, Molecular Sequence Data, Protein Binding, Protein Conformation, Protein Structure, Tertiary, Recombinant Proteins chemistry, Sequence Homology, Amino Acid, Streptococcus equi genetics, Streptococcus equi growth & development, Fibronectins metabolism, Gelatin metabolism, Recombinant Proteins metabolism, Streptococcus equi metabolism
- Abstract
Fibronectin-binding proteins (FnBPs) of Staphylococcus aureus and Streptococcus pyogenes mediate invasion of human endothelial and epithelial cells in a process likely to aid the persistence and/or dissemination of infection. In addition to binding sites for the N-terminal domain (NTD) of fibronectin (Fn), a number of streptococcal FnBPs also contain an upstream region (UR) that is closely associated with an NTD-binding region; UR binds to the adjacent gelatin-binding domain (GBD) of Fn. Previously, UR was shown to be required for efficient streptococcal invasion of epithelial cells. Here we show, using a Streptococcus zooepidemicus FnBP, that the UR-binding site in GBD resides largely in the (8)F1(9)F1 module pair. We also show that UR inhibits binding of a peptide from the α1 chain of type I collagen to (8)F1(9)F1 and that UR binding to (8)F1 is likely to occur through anti-parallel β-zipper formation. Thus, we propose that streptococcal proteins that contain adjacent NTD- and GBD-binding sites form a highly unusual extended tandem β-zipper that spans the two domains and mediates high affinity binding to Fn through a large intermolecular interface. The proximity of the UR- and NTD-binding sequences in streptococcal FnBPs is consistent with a non-linear arrangement of modules in the tertiary structure of the GBD of Fn.
- Published
- 2010
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43. Implications for collagen binding from the crystallographic structure of fibronectin 6FnI1-2FnII7FnI.
- Author
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Erat MC, Schwarz-Linek U, Pickford AR, Farndale RW, Campbell ID, and Vakonakis I
- Subjects
- Animals, Binding Sites, Cell Movement, Circular Dichroism methods, Magnetic Resonance Spectroscopy methods, Peptides chemistry, Pichia metabolism, Protein Binding, Protein Conformation, Recombinant Proteins chemistry, Solvents chemistry, Collagen chemistry, Crystallography, X-Ray methods, Fibronectins chemistry
- Abstract
Collagen and fibronectin (FN) are two abundant and essential components of the vertebrate extracellular matrix; they interact directly with cellular receptors and affect cell adhesion and migration. Past studies identified a FN fragment comprising six modules, (6)FnI(1-2)FnII(7-9)FnI, and termed the gelatin binding domain (GBD) as responsible for collagen interaction. Recently, we showed that the GBD binds tightly to a specific site within type I collagen and determined the structure of domains (8-9)FnI in complex with a peptide from that site. Here, we present the crystallographic structure of domains (6)FnI(1-2)FnII(7)FnI, which form a compact, globular unit through interdomain interactions. Analysis of NMR titrations with single-stranded collagen peptides reveals a dominant collagen interaction surface on domains (2)FnII and (7)FnI; a similar surface appears involved in interactions with triple-helical peptides. Models of the complete GBD, based on the new structure and the (8-9)FnI·collagen complex show a continuous putative collagen binding surface. We explore the implications of this model using long collagen peptides and discuss our findings in the context of FN interactions with collagen fibrils.
- Published
- 2010
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44. The talin FERM domain is not so FERM.
- Author
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Campbell ID
- Abstract
The structure of the head domain of talin, an intracellular activator of integrin membrane adhesion receptors, has been solved by Elliott et al. (2010). A FERM domain can be identified in the head from sequence comparisons but, rather than having a compact structure of three subdomains, it has linear arrangement of four subdomains., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2010
- Full Text
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45. The structure of the talin/integrin complex at a lipid bilayer: an NMR and MD simulation study.
- Author
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Kalli AC, Wegener KL, Goult BT, Anthis NJ, Campbell ID, and Sansom MS
- Subjects
- Amino Acid Sequence, Animals, Binding Sites genetics, Humans, Integrin beta1 metabolism, Lipid Bilayers metabolism, Magnetic Resonance Spectroscopy, Membrane Lipids chemistry, Membrane Lipids metabolism, Models, Molecular, Molecular Dynamics Simulation, Molecular Sequence Data, Multiprotein Complexes chemistry, Multiprotein Complexes metabolism, Mutation, Platelet Membrane Glycoprotein IIb metabolism, Protein Binding, Protein Multimerization, Protein Structure, Tertiary, Sequence Homology, Amino Acid, Talin genetics, Talin metabolism, Integrin beta1 chemistry, Lipid Bilayers chemistry, Platelet Membrane Glycoprotein IIb chemistry, Talin chemistry
- Abstract
Integrins are cell surface receptors crucial for cell migration and adhesion. They are activated by interactions of the talin head domain with the membrane surface and the integrin β cytoplasmic tail. Here, we use coarse-grained molecular dynamic simulations and nuclear magnetic resonance spectroscopy to elucidate the membrane-binding surfaces of the talin head (F2-F3) domain. In particular, we show that mutations in the four basic residues (K258E, K274E, R276E, and K280E) in the F2 binding surface reduce the affinity of the F2-F3 for the membrane and modify its orientation relative to the bilayer. Our results highlight the key role of anionic lipids in talin/membrane interactions. Simulation of the F2-F3 in complex with the α/β transmembrane dimer reveals information for its orientation relative to the membrane. Our studies suggest that the perturbed orientation of talin relative to the membrane in the F2 mutant would be expected to in turn perturb talin/integrin interactions., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2010
- Full Text
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46. Beta integrin tyrosine phosphorylation is a conserved mechanism for regulating talin-induced integrin activation.
- Author
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Anthis NJ, Haling JR, Oxley CL, Memo M, Wegener KL, Lim CJ, Ginsberg MH, and Campbell ID
- Subjects
- Amino Acid Motifs physiology, Amino Acid Substitution, Animals, Cell Line, DNA-Binding Proteins chemistry, DNA-Binding Proteins genetics, Integrin beta Chains chemistry, Integrin beta Chains genetics, Mice, Mutation, Missense, Nuclear Magnetic Resonance, Biomolecular, Phosphoproteins chemistry, Phosphoproteins genetics, Phosphorylation physiology, Protein Binding physiology, Protein Structure, Tertiary physiology, RNA-Binding Proteins chemistry, RNA-Binding Proteins genetics, Talin chemistry, Talin genetics, Tyrosine chemistry, Tyrosine genetics, DNA-Binding Proteins metabolism, Integrin beta Chains metabolism, Phosphoproteins metabolism, RNA-Binding Proteins metabolism, Talin metabolism, Tyrosine metabolism
- Abstract
Integrins are large membrane-spanning receptors fundamental to cell adhesion and migration. Integrin adhesiveness for the extracellular matrix is activated by the cytoskeletal protein talin via direct binding of its phosphotyrosine-binding-like F3 domain to the cytoplasmic tail of the beta integrin subunit. The phosphotyrosine-binding domain of the signaling protein Dok1, on the other hand, has an inactivating effect on integrins, a phenomenon that is modulated by integrin tyrosine phosphorylation. Using full-length tyrosine-phosphorylated (15)N-labeled beta3, beta1A, and beta7 integrin tails and an NMR-based protein-protein interaction assay, we show that talin1 binds to the NPXY motif and the membrane-proximal portion of beta3, beta1A, and beta7 tails, and that the affinity of this interaction is decreased by integrin tyrosine phosphorylation. Dok1 only interacts weakly with unphosphorylated tails, but its affinity is greatly increased by integrin tyrosine phosphorylation. The Dok1 interaction remains restricted to the integrin NPXY region, thus phosphorylation inhibits integrin activation by increasing the affinity of beta integrin tails for a talin competitor that does not form activating membrane-proximal interactions with the integrin. Key residues governing these specificities were identified by detailed structural analysis, and talin1 was engineered to bind preferentially to phosphorylated integrins by introducing the mutation D372R. As predicted, this mutation affects talin1 localization in live cells in an integrin phosphorylation-specific manner. Together, these results indicate that tyrosine phosphorylation is a common mechanism for regulating integrin activation, despite subtle differences in how these integrins interact with their binding proteins.
- Published
- 2009
- Full Text
- View/download PDF
47. The structure of the N-terminus of kindlin-1: a domain important for alphaiibbeta3 integrin activation.
- Author
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Goult BT, Bouaouina M, Harburger DS, Bate N, Patel B, Anthis NJ, Campbell ID, Calderwood DA, Barsukov IL, Roberts GC, and Critchley DR
- Subjects
- Amino Acid Sequence, Membrane Proteins metabolism, Models, Molecular, Molecular Sequence Data, Mutagenesis, Insertional, Neoplasm Proteins metabolism, Nuclear Magnetic Resonance, Biomolecular, Protein Interaction Domains and Motifs, Protein Structure, Tertiary, Sequence Homology, Amino Acid, Talin chemistry, Talin genetics, Talin metabolism, Membrane Proteins chemistry, Membrane Proteins genetics, Neoplasm Proteins chemistry, Neoplasm Proteins genetics, Platelet Glycoprotein GPIIb-IIIa Complex metabolism
- Abstract
The integrin family of heterodimeric cell adhesion molecules exists in both low- and high-affinity states, and integrin activation requires binding of the talin FERM (four-point-one, ezrin, radixin, moesin) domain to membrane-proximal sequences in the beta-integrin cytoplasmic domain. However, it has recently become apparent that the kindlin family of FERM domain proteins is also essential for talin-induced integrin activation. FERM domains are typically composed of F1, F2, and F3 domains, but the talin FERM domain is atypical in that it contains a large insert in F1 and is preceded by a previously unrecognized domain, F0. Initial sequence alignments showed that the kindlin FERM domain was most similar to the talin FERM domain, but the homology appeared to be restricted to the F2 and F3 domains. Based on a detailed characterization of the talin FERM domain, we have reinvestigated the sequence relationship with kindlins and now show that kindlins do indeed contain the same domain structure as the talin FERM domain. However, the kindlin F1 domain contains an even larger insert than that in talin F1 that disrupts the sequence alignment. The insert, which varies in length between different kindlins, is not conserved and, as in talin, is largely unstructured. We have determined the structure of the kindlin-1 F0 domain by NMR, which shows that it adopts the same ubiquitin-like fold as the talin F0 and F1 domains. Comparison of the kindlin-1 and talin F0 domains identifies the probable interface with the kindlin-1 F1 domain. Potential sites of interaction of kindlin F0 with other proteins are discussed, including sites that differ between kindlin-1, kindlin-2, and kindlin-3. We also demonstrate that F0 is required for the ability of kindlin-1 to support talin-induced alphaIIbbeta3 integrin activation and for the localization of kindlin-1 to focal adhesions.
- Published
- 2009
- Full Text
- View/download PDF
48. The structure of an integrin/talin complex reveals the basis of inside-out signal transduction.
- Author
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Anthis NJ, Wegener KL, Ye F, Kim C, Goult BT, Lowe ED, Vakonakis I, Bate N, Critchley DR, Ginsberg MH, and Campbell ID
- Subjects
- Amino Acid Sequence, Animals, CHO Cells, Cell Membrane metabolism, Cell Polarity physiology, Cricetinae, Cricetulus, Integrins metabolism, Models, Biological, Models, Molecular, Molecular Sequence Data, Protein Binding, Protein Structure, Tertiary, Sequence Homology, Amino Acid, Talin metabolism, Integrins chemistry, Macromolecular Substances chemistry, Signal Transduction physiology, Talin chemistry
- Abstract
Fundamental to cell adhesion and migration, integrins are large heterodimeric membrane proteins that uniquely mediate inside-out signal transduction, whereby adhesion to the extracellular matrix is activated from within the cell by direct binding of talin to the cytoplasmic tail of the beta integrin subunit. Here, we report the first structure of talin bound to an authentic full-length beta integrin tail. Using biophysical and whole cell measurements, we show that a specific ionic interaction between the talin F3 domain and the membrane-proximal helix of the beta tail disrupts an integrin alpha/beta salt bridge that helps maintain the integrin inactive state. Second, we identify a positively charged surface on the talin F2 domain that precisely orients talin to disrupt the heterodimeric integrin transmembrane (TM) complex. These results show key structural features that explain the ability of talin to mediate inside-out TM signalling.
- Published
- 2009
- Full Text
- View/download PDF
49. Asparaginyl beta-hydroxylation of proteins containing ankyrin repeat domains influences their stability and function.
- Author
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Hardy AP, Prokes I, Kelly L, Campbell ID, and Schofield CJ
- Subjects
- Amino Acid Sequence, Catalytic Domain, Hydroxylation, Models, Molecular, Molecular Sequence Data, Protein Stability, Protein Structure, Tertiary, Proteins physiology, Repressor Proteins metabolism, Sequence Homology, Amino Acid, Structure-Activity Relationship, Substrate Specificity, Temperature, Ankyrin Repeat, Asparagine metabolism, Mixed Function Oxygenases metabolism, Proteins chemistry, Proteins metabolism
- Abstract
Recent reports have provided evidence that the beta-hydroxylation of conserved asparaginyl residues in ankyrin repeat domain (ARD) proteins is a common posttranslational modification in animal cells. Here, nuclear magnetic resonance (NMR) and other biophysical techniques are used to study the effect of asparaginyl beta-hydroxylation on the structure and stability of 'consensus' ARD proteins. The NMR analyses support previous work suggesting that a single beta-hydroxylation of asparagine can stabilize the stereotypical ARD fold. A second asparaginyl beta-hydroxylation causes further stabilization. In combination with mutation studies, the biophysical analyses reveal that the stabilizing effect of beta-hydroxylation is, in part, mediated by a hydrogen bond between the asparaginyl beta-hydroxyl group and the side chain of a conserved aspartyl residue, two residues to the N-terminal side of the target asparagine. Removal of this hydrogen bond resulted in reduced stabilization by hydroxylation. Formation of the same hydrogen bond is also shown to be a factor in inhibiting binding of hydroxylated ARDs to factor-inhibiting hypoxia-inducible factor (FIH). The effects of hydroxylation appear to be predominantly localized to the target asparagine and proximal residues, at least in the consensus ARD protein. The results reveal that thermodynamic stability is a factor in determining whether a particular ARD protein is an FIH substrate; a consensus ARD protein with three ankyrin repeats is an FIH substrate, while more stable consensus ARD proteins, with four or five ankyrin repeats, are not. However, NMR studies reveal that the consensus protein with four ankyrin repeats is still able to bind to FIH, suggesting that FIH may interact in cells with natural ankyrin repeats without resulting hydroxylation. Overall, the work provides novel biophysical insights into the mechanism by which asparaginyl beta-hydroxylation stabilizes the ARD proteins and reduces their binding to FIH.
- Published
- 2009
- Full Text
- View/download PDF
50. Motogenic sites in human fibronectin are masked by long range interactions.
- Author
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Vakonakis I, Staunton D, Ellis IR, Sarkies P, Flanagan A, Schor AM, Schor SL, and Campbell ID
- Subjects
- Alternative Splicing, Amino Acid Substitution, Animals, Cell Line, Chromatography, Gel, Collagen physiology, Cytokines chemistry, Cytokines genetics, Cytokines physiology, Escherichia coli genetics, Fibronectins genetics, Genetic Variation, Humans, Kidney, Magnetic Resonance Spectroscopy, Models, Molecular, Peptide Fragments chemistry, Peptide Fragments genetics, Pichia physiology, Protein Conformation, Rats, Recombinant Proteins chemistry, Tail, Tendons, Wound Healing, Fibronectins chemistry, Fibronectins physiology
- Abstract
Fibronectin (FN) is a large extracellular matrix glycoprotein important for development and wound healing in vertebrates. Recent work has focused on the ability of FN fragments and embryonic or tumorigenic splicing variants to stimulate fibroblast migration into collagen gels. This activity has been localized to specific sites and is not exhibited by full-length FN. Here we show that an N-terminal FN fragment, spanning the migration stimulation sites and including the first three type III FN domains, also lacks this activity. A screen for interdomain interactions by solution-state NMR spectroscopy revealed specific contacts between the Fn N terminus and two of the type III domains. A single amino acid substitution, R222A, disrupts the strongest interaction, between domains (4-5)FnI and (3)FnIII, and restores motogenic activity to the FN N-terminal fragment. Anastellin, which promotes fibril formation, destabilizes (3)FnIII and disrupts the observed (4-5)FnI-(3)FnIII interaction. We discuss these findings in the context of the control of cellular activity through exposure of masked sites.
- Published
- 2009
- Full Text
- View/download PDF
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