4,469 results on '"Caliciviridae Infections"'
Search Results
2. A Phase 1, Open-label, Safety and Immunogenicity Study of an Oral Multi-dose Administration Regimen With an Adenoviral-vector Based Tablet Norovirus Vaccine (VXA-G1.1-NN) Administered to Healthy Adult Volunteers (VXA-G1-1-NN)
- Published
- 2024
3. Norovirus Challenge Study (G1-1 Challenge)
- Published
- 2024
4. Immunogenicity & Safety Study of Adenovirus Type 5 (AD5) Based Oral Norovirus Vaccines (VXA-NVV-105)
- Published
- 2024
5. An approach to zwitterionic peptide design for colorimetric detection of the Southampton norovirus SV3CP protease.
- Author
-
Yeung, Justin, Jin, Zhicheng, Ling, Chuxuan, Retout, Maurice, Barbosa da Silva, Elany, Damani, Manan, Chang, Yu-Ci, Yim, Wonjun, ODonoghue, Anthony, and Jokerst, Jesse
- Subjects
Humans ,Peptide Hydrolases ,Norovirus ,Gold ,Colorimetry ,Metal Nanoparticles ,Peptides ,Endopeptidases ,Feces ,Caliciviridae Infections ,Reverse Transcriptase Polymerase Chain Reaction - Abstract
Noroviruses are highly contagious and are one of the leading causes of acute gastroenteritis worldwide. Due to a lack of effective antiviral therapies, there is a need to diagnose and surveil norovirus infections to implement quarantine protocols and prevent large outbreaks. Currently, the gold standard of diagnosis uses reverse transcription polymerase chain reaction (RT-PCR), but PCR can have limited availability. Here, we propose a combination of a tunable peptide substrate and gold nanoparticles (AuNPs) to colorimetrically detect the Southampton norovirus 3C-like protease (SV3CP), a key protease in viral replication. Careful design of the substrate employs a zwitterionic peptide with opposite charged moieties on the C- and N- termini to induce a rapid color change visible to the naked eye; thus, this color change is indicative of SV3CP activity. This work expands on existing zwitterionic peptide strategies for protease detection by systematically evaluating the effects of lysine and arginine on nanoparticle charge screening. We also determine a limit of detection for SV3CP of 28.0 nM with comparable results in external breath condensate, urine, and fecal matter for 100 nM of SV3CP. The key advantage of this system is its simplicity and accessibility, thus making it an attractive tool for qualitative point-of-care diagnostics.
- Published
- 2023
6. Admission Pattern Among Children With Gastro-intestinal Infections Before and During the Covid-19 Pandemic
- Author
-
Maren Rytter, Consultant, PhD, clinical associate professor
- Published
- 2024
7. Human norovirus in Brazil: an update of reports in different settings
- Author
-
Oliveira, João Gabriel dos Santos, Costa, Antônio Samuel da Silva, Ferreira, Igor Vincenzi, Carvalho, Mateus de Oliveira, Siqueira, Jones Anderson Monteiro, and Aires, Caio Augusto Martins
- Published
- 2024
- Full Text
- View/download PDF
8. Phase III Clinical Trial to Evaluate the Human Norovirus Bivalent (GⅠ.1/GⅡ.4)Vaccine,Recombinant (Hansenula Polymorpha)
- Author
-
Lanzhou Institute of Biological Products Co., Ltd
- Published
- 2023
9. Extracellular Vesicles (EVs) Are Copurified with Feline Calicivirus, yet EV-Enriched Fractions Remain Infectious
- Author
-
Mizenko, Rachel R, Brostoff, Terza, Jackson, Kenneth, Pesavento, Patricia A, and Carney, Randy P
- Subjects
Microbiology ,Biological Sciences ,Infectious Diseases ,Aetiology ,2.2 Factors relating to the physical environment ,Infection ,Good Health and Well Being ,Animals ,Caliciviridae Infections ,Calicivirus ,Feline ,Cat Diseases ,Cats ,Communicable Diseases ,Extracellular Vesicles ,Humans ,Respiratory Tract Infections ,density gradient ,extracellular vesicles ,Feline calicivirus - Abstract
Feline calicivirus (FCV) is a major cause of upper respiratory disease in cats and is often used as a model for human norovirus, making it of great veterinary and human medical importance. However, questions remain regarding the route of entry of FCV in vivo. Increasing work has shown that extracellular vesicles (EVs) can be active in viral infectivity, yet there is no work examining the role of EVs in FCV infection. Here, we begin to address this knowledge gap by characterizing EVs produced by a feline mammary epithelial cell line (FMEC). We have confirmed that EVs are produced by infected and mock-infected FMECs and that both virions and EVs are coisolated with standard methods of virus purification. We also show that they can be enriched differentially by continuous iodixanol density gradient. EVs were enriched at a density of 1.10 g/mL confirmed by tetraspanin expression, size profile, and transmission electron microscopy (TEM). Maximum enrichment of FCV at a density of 1.18 g/mL was confirmed by titration, quantitative reverse transcriptase PCR (q-RT PCR), and TEM. However, infectious virus was recovered from nearly all samples. When used to infect in vitro epithelium, both EV-rich and virus-rich fractions had the same levels of infectiousness as determined by percentage of wells infected or titer achieved postinfection. These findings highlight the importance of coisolates during viral purification, showing that EVs may represent a parallel route of entry that has previously been overlooked. Additional experiments are necessary to explore the role of EVs in FCV infection. IMPORTANCE Feline calicivirus (FCV) is a common cause of upper respiratory infection in cats. Both healthy and infected cells produce small particles called extracellular vesicles (EVs), which are nanoparticles that act as messengers between cells and can be hijacked during viral infection. Historically, the role of EVs in viral infection has been overlooked, and subsequently no group has studied the role of EVs in FCV infection. We hypothesized that EVs may play a role in FCV infection. Here, we show that EVs are copurified with FCV when collecting virus. To study their individual effects, we successfully enrich for viral particles and EVs separately by taking advantage of their different densities. Our initial studies show that EV-enriched versus virus-enriched fractions are equally able to infect cells in culture. These findings highlight the need to both consider the purity of virus after purification and to further study EVs' role in natural FCV infection.
- Published
- 2022
10. Early circulation of rabbit haemorrhagic disease virus type 2 in domestic and wild lagomorphs in southern California, USA (2020-2021).
- Author
-
Asin, Javier, Rejmanek, Daniel, Clifford, Deana L, Mikolon, Andrea B, Henderson, Eileen E, Nyaoke, Akinyi C, Macías-Rioseco, Melissa, Streitenberger, Nicolas, Beingesser, Juliann, Woods, Leslie W, Lavazza, Antonio, Capucci, Lorenzo, Crossley, Beate, and Uzal, Francisco A
- Subjects
Animals ,Lagomorpha ,Hares ,Rabbits ,Lagovirus ,Hemorrhagic Disease Virus ,Rabbit ,Caliciviridae Infections ,Necrosis ,Phylogeny ,British Columbia ,California ,RHD ,RHDV2 ,lagomorphs ,rabbit ,Infectious Diseases ,Digestive Diseases ,Liver Disease ,Aetiology ,2.1 Biological and endogenous factors ,Infection ,Good Health and Well Being ,Life on Land ,Veterinary Sciences ,Public Health and Health Services - Abstract
Rabbit haemorrhagic disease virus type 2 (RHDV2) causes a severe systemic disease with hepatic necrosis. Differently from classic RHDV, which affects only European rabbits (Oryctolagus cuniculus), RHDV2 can affect many leporid species, including hares (Lepus spp.) and cottontail rabbits (Sylvilagus spp.). RHDV2 emerged in Europe in 2010 and spread worldwide. During the last 5 years, there have been multiple outbreaks in North America since the first known event in 2016 in Quebec, Canada, including several detections in British Columbia, Canada, between 2018 and 2019, Washington State and Ohio, USA, in 2018 and 2019, and New York, USA, in 2020. However, the most widespread outbreak commenced in March 2020 in the southwestern USA and Mexico. In California, RHDV2 spread widely across several southern counties between 2020 and 2021, and the aim of this study was to report and characterize these early events of viral incursion and circulation within the state. Domestic and wild lagomorphs (n = 81) collected between August 2020 and February 2021 in California with a suspicion of RHDV2 infection were tested by reverse transcription quantitative real-time PCR on the liver, and histology and immunohistochemistry for pan-lagovirus were performed on liver sections. In addition, whole genome sequencing from 12 cases was performed. During this period, 33/81 lagomorphs including 24/59 domestic rabbits (O. cuniculus), 3/16 desert cottontail rabbits (Sylvilagus audubonii), and 6/6 black-tailed jackrabbits (Lepus californicus) tested positive. All RHDV2-positive animals had hepatic necrosis typical of pathogenic lagovirus infection, and the antigen was detected in sections from individuals of the three species. The 12 California sequences were closely related (98.9%-99.95%) to each other, and also very similar (99.0%-99.4%) to sequences obtained in other southwestern states during the 2020-2021 outbreak; however, they were less similar to strains obtained in New York in 2020 (96.7%-96.9%) and Quebec in 2016 (92.4%-92.6%), suggesting that those events could be related to different viral incursions. The California sequences were more similar (98.6%-98.7%) to a strain collected in British Columbia in 2018, which suggests that that event could have been related to the 2020 outbreak in the southwestern USA.
- Published
- 2022
11. Ph 1b: Safety & Immunogenicity of Ad5 Based Oral Norovirus Vaccine (VXA-NVV-104)
- Published
- 2023
12. Clinical Trial to Evaluate the Recombinant Norovirus Bivalent (GI. 1 / GII. 4) Vaccine (Hansenula Polymorpha)
- Author
-
Lanzhou Institute of Biological Products Co., Ltd, Beijing Zhong Sheng Heng Yi Pharmaceutical Technology Co., Ltd., and Zhengzhou University
- Published
- 2022
13. Safety & Immunogenicity Study of Ad5 Based Oral Norovirus Vaccines (VXA-NVV-103)
- Published
- 2022
14. Outbreak of rabbit hemorrhagic disease virus 2 in the southwestern United States: first detections in southern California
- Author
-
Asin, Javier, Nyaoke, Akinyi C, Moore, Janet D, Gonzalez-Astudillo, Viviana, Clifford, Deana L, Lantz, Emma L, Mikolon, Andrea B, Dodd, Kimberly A, Crossley, Beate, and Uzal, Francisco A
- Subjects
Veterinary Sciences ,Agricultural ,Veterinary and Food Sciences ,Infectious Diseases ,Emerging Infectious Diseases ,Infection ,Life on Land ,Animals ,Animals ,Wild ,Caliciviridae Infections ,Disease Outbreaks ,Hares ,Hemorrhagic Disease Virus ,Rabbit ,Rabbits ,Southwestern United States ,California ,rabbit hemorrhagic disease virus 2 ,rabbits ,Zoology ,Veterinary sciences - Abstract
An outbreak of rabbit hemorrhagic disease virus 2 (RHDV2)-associated disease occurred in the southwestern United States following its first detection in New Mexico in March 2020. The disease spread throughout several states and was diagnosed for the first time in California on May 11, 2020, in a black-tailed jackrabbit (Lepus californicus). The following day, the California Department of Food and Agriculture (CDFA) issued an order banning the entrance into California of several lagomorph species and their products from any state in which the disease had been detected in the last 12 mo. RHDV2 is a threat to wild lagomorph species in California, including the endangered riparian brush rabbit (Sylvilagus bachmani riparius). Therefore, the California Department of Fish and Wildlife (CDFW) started tracking any mortality event in wild lagomorph populations. As of August 9, 2020, RHDV2 had been detected in wild and domestic lagomorphs of several counties in southern California that were submitted to the California Animal Health and Food Safety laboratory system by the CDFA or the CDFW. These positive cases included 2 additional black-tailed jackrabbits and 3 desert cottontail rabbits (Sylvilagus audubonii). In addition, the infection spilled over to domestic populations, whereby it was confirmed on July 10, 2020, in a domestic rabbit (Oryctolagus cuniculus).
- Published
- 2021
15. Use of unbiased metagenomic and transcriptomic analyses to investigate the association between feline calicivirus and feline chronic gingivostomatitis in domestic cats.
- Author
-
Fried, William A, Soltero-Rivera, Maria, Ramesh, Akshaya, Lommer, Milinda J, Arzi, Boaz, DeRisi, Joseph L, and Horst, Jeremy A
- Subjects
Animals ,Cats ,Calicivirus ,Feline ,Caliciviridae Infections ,Stomatitis ,Cat Diseases ,Polymerase Chain Reaction ,Transcriptome ,Calicivirus ,Feline ,Veterinary Sciences ,Biological Sciences ,Agricultural and Veterinary Sciences - Abstract
ObjectiveTo identify associations between microbes and host genes in cats with feline chronic gingivostomatitis (FCGS), a debilitating inflammatory oral mucosal disease with no known cause, compared with healthy cats and cats with periodontitis (control cats).Animals19 control cats and 23 cats with FCGS.ProceduresAt least 1 caudal oral mucosal swab specimen was obtained from each cat. Each specimen underwent unbiased metatranscriptomic next-generation RNA sequencing (mNGS). Filtered mNGS reads were aligned to all known genetic sequences from all organisms and to the cat transcriptome. The relative abundances of microbial and host gene read alignments were compared between FCGS-affected cats and control cats and between FCGS-affected cats that did and did not clinically respond to primary treatment. Assembled feline calicivirus (FCV) genomes were compared with reverse transcription PCR (RT-PCR) primers commonly used to identify FCV.ResultsThe only microbe strongly associated with FCGS was FCV, which was detected in 21 of 23 FCGS-affected cats but no control cats. Problematic base pair mismatches were identified between the assembled FCV genomes and RT-PCR primers. Puma feline foamy virus was detected in 9 of 13 FCGS-affected cats that were refractory to treatment and 5 healthy cats but was not detected in FCGS-affected cats that responded to tooth extractions. The most differentially expressed genes in FCGS-affected cats were those associated with antiviral activity.Conclusions and clinical relevanceResults suggested that FCGS pathogenesis has a viral component. Many FCV strains may yield false-negative results on RT-PCR-based assays. Coinfection of FCGS-affected cats with FCV and puma feline foamy virus may adversely affect response to treatment.
- Published
- 2021
16. Feline Calicivirus Virulent Systemic Disease: Clinical Epidemiology, Analysis of Viral Isolates and In Vitro Efficacy of Novel Antivirals in Australian Outbreaks
- Author
-
Bordicchia, Matteo, Fumian, Tulio Machado, Van Brussel, Kate, Russo, Alice G, Carrai, Maura, Le, Shi-Jia, Pesavento, Patricia A, Holmes, Edward C, Martella, Vito, White, Peter, Beatty, Julia A, Shi, Mang, and Barrs, Vanessa R
- Subjects
Microbiology ,Biological Sciences ,Infection ,Good Health and Well Being ,Animals ,Antiviral Agents ,Australia ,Caliciviridae Infections ,Calicivirus ,Feline ,Capsid ,Cat Diseases ,Cats ,Cytidine ,Disease Outbreaks ,Female ,Male ,Metagenome ,Nitro Compounds ,Phylogeny ,Thiazoles ,Caliciviridae ,Vesivirus ,nitazoxanide ,'-C-methylcytidine ,NITD-008 ,2′-C-methylcytidine - Abstract
Feline calicivirus (FCV) causes upper respiratory tract disease (URTD) and sporadic outbreaks of virulent systemic disease (FCV-VSD). The basis for the increased pathogenicity of FCV-VSD viruses is incompletely understood, and antivirals for FCV-VSD have yet to be developed. We investigated the clinicoepidemiology and viral features of three FCV-VSD outbreaks in Australia and evaluated the in vitro efficacy of nitazoxanide (NTZ), 2'-C-methylcytidine (2CMC) and NITD-008 against FCV-VSD viruses. Overall mortality among 23 cases of FCV-VSD was 39%. Metagenomic sequencing identified five genetically distinct FCV lineages within the three outbreaks, all seemingly evolving in situ in Australia. Notably, no mutations that clearly distinguished FCV-URTD from FCV-VSD phenotypes were identified. One FCV-URTD strain likely originated from a recombination event. Analysis of seven amino-acid residues from the hypervariable E region of the capsid in the cultured viruses did not support the contention that properties of these residues can reliably differentiate between the two pathotypes. On plaque reduction assays, dose-response inhibition of FCV-VSD was obtained with all antivirals at low micromolar concentrations; NTZ EC50, 0.4-0.6 µM, TI = 21; 2CMC EC50, 2.7-5.3 µM, TI > 18; NITD-008, 0.5 to 0.9 µM, TI > 111. Investigation of these antivirals for the treatment of FCV-VSD is warranted.
- Published
- 2021
17. Infectious Norovirus Is Chronically Shed by Immunocompromised Pediatric Hosts.
- Author
-
Davis, Amy, Cortez, Valerie, Grodzki, Marco, Dallas, Ronald, Ferrolino, Jose, Freiden, Pamela, Maron, Gabriela, Hakim, Hana, Hayden, Randall T, Tang, Li, Huys, Adam, Kolawole, Abimbola O, Wobus, Christiane E, Jones, Melissa K, Karst, Stephanie M, and Schultz-Cherry, Stacey
- Subjects
Feces ,Humans ,Norovirus ,Cross Infection ,Caliciviridae Infections ,Gastroenteritis ,Prospective Studies ,Pediatrics ,Seasons ,Carrier State ,Virus Shedding ,Immunocompromised Host ,Adolescent ,Adult ,Child ,Child ,Preschool ,Infant ,Female ,Male ,Young Adult ,asymptomatic ,diarrhea ,genotype ,immunocompromised host ,infectious virus shedding ,norovirus ,Microbiology - Abstract
Noroviruses are a leading cause of gastroenteritis worldwide. Although infections in healthy individuals are self-resolving, immunocompromised individuals are at risk for chronic disease and severe complications. Chronic norovirus infections in immunocompromised hosts are often characterized by long-term virus shedding, but it is unclear whether this shed virus remains infectious. We investigated the prevalence, genetic heterogeneity, and temporal aspects of norovirus infections in 1140 patients treated during a 6-year period at a pediatric research hospital. Additionally, we identified 20 patients with chronic infections lasting 37 to >418 days. Using a new human norovirus in vitro assay, we confirmed the continuous shedding of infectious virus for the first time. Shedding lasted longer in male patients and those with diarrheal symptoms. Prolonged shedding of infectious norovirus in immunocompromised hosts can potentially increase the likelihood of transmission, highlighting the importance of isolation precautions to prevent nosocomial infections.
- Published
- 2020
18. Effects of famciclovir in cats with spontaneous acute upper respiratory tract disease
- Author
-
Kopecny, Lucy, Maggs, David J, Leutenegger, Christian M, and Johnson, Lynelle R
- Subjects
Infectious Diseases ,6.1 Pharmaceuticals ,Evaluation of treatments and therapeutic interventions ,Infection ,Animals ,Antiviral Agents ,Bordetella Infections ,Bordetella bronchiseptica ,Caliciviridae Infections ,Calicivirus ,Feline ,Cat Diseases ,Cats ,Chlamydia ,Chlamydia Infections ,Famciclovir ,Herpesviridae Infections ,Mycoplasma ,Mycoplasma Infections ,Nucleic Acids ,Real-Time Polymerase Chain Reaction ,Respiratory Tract Infections ,Varicellovirus ,Herpesvirus ,famciclovir ,doxycycline ,quantitative PCR ,Veterinary Sciences - Abstract
ObjectivesThe aim of this study was to assess the effects of famciclovir administration in cats with spontaneously acquired acute upper respiratory tract disease.MethodsTwenty-four kittens with clinical signs of acute upper respiratory tract disease were randomly allocated to receive doxycycline (5 mg/kg PO q12h) alone (group D; n = 12) or with famciclovir (90 mg/kg PO q12h; group DF; n = 12) for up to 3 weeks. Clinical disease severity was scored at study entry and daily thereafter. Oculo-oropharyngeal swabs collected at study entry and exit were assessed using quantitative PCR for nucleic acids of feline herpesvirus type 1 (FHV-1), feline calicivirus (FCV), Chlamydia felis, Bordetella bronchiseptica and Mycoplasma felis.ResultsThe median (range) age of cats was 1.5 (1-6) months in group D vs 1.6 (1-5) months in group DF (P = 0.54). Pathogens detected in oculo-oropharyngeal swabs at study entry included FCV (n = 13/24; 54%), M felis (n = 8/24; 33%), FHV-1 (n = 7/24; 29%), C felis (n = 7/24; 29%) and B bronchiseptica (n = 3/24; 12%). Median (range) duration of clinical signs was 11.5 (3-21) days in group DF and 11 (3-21) days in group D (P = 0.75). Median (range) total disease score at the end of the study did not differ between groups (group D 1 [1-1] vs group DF 1 [1-3]; P = 0.08).Conclusions and relevanceThis study revealed no significant difference in response to therapy between cats treated with doxycycline alone or with famciclovir; cats improved rapidly in both groups. However, identification of FHV-1 DNA was relatively uncommon in this study and clinical trials focused on FHV-1-infected cats are warranted to better evaluate famciclovir efficacy.
- Published
- 2020
19. Trends in Incidence of Norovirus-associated Acute Gastroenteritis in 4 Veterans Affairs Medical Center Populations in the United States, 2011-2015.
- Author
-
Grytdal, Scott, Browne, Hannah, Collins, Nikail, Vargas, Blanca, Rodriguez-Barradas, Maria, Rimland, David, Beenhouwer, David, Brown, Sheldon, Lucero-Obusan, Cynthia, Holodniy, Mark, Kambhampati, Anita, Parashar, Umesh, Vinjé, Jan, Lopman, Ben, Hall, Aron, Cardemil, Cristina, and Goetz, Matthew
- Subjects
gastroenteritis ,inpatients ,norovirus ,outpatients ,veterans ,Adult ,Caliciviridae Infections ,Feces ,Gastroenteritis ,Genotype ,Georgia ,Humans ,Incidence ,Infant ,Los Angeles ,New York ,Norovirus ,Phylogeny ,Texas ,United States ,Veterans - Abstract
BACKGROUND: Norovirus is an important cause of epidemic acute gastroenteritis (AGE), yet the burden of endemic disease in adults has not been well documented. We estimated the prevalence and incidence of outpatient and community-acquired inpatient norovirus AGE at 4 Veterans Affairs Medical Centers (VAMC) (Atlanta, Georgia; Bronx, New York; Houston, Texas; and Los Angeles, California) and examined trends over 4 surveillance years. METHODS: From November 2011 to September 2015, stool specimens collected within 7 days of AGE symptom onset for clinician-requested diagnostic testing were tested for norovirus, and positive samples were genotyped. Incidence was calculated by multiplying norovirus prevalence among tested specimens by AGE-coded outpatient encounters and inpatient discharges, and dividing by the number of unique patients served. RESULTS: Of 1603 stool specimens, 6% tested were positive for norovirus; GII.4 viruses (GII.4 New Orleans [17%] and GII.4 Sydney [47%]) were the most common genotypes. Overall prevalence and outpatient and inpatient community-acquired incidence followed a seasonal pattern, with higher median rates during November-April (9.2%, 376/100 000, and 45/100 000, respectively) compared to May-October (3.0%, 131/100 000, and 13/100 000, respectively). An alternate-year pattern was also detected, with highest peak prevalence and outpatient and inpatient community-acquired norovirus incidence rates in the first and third years of surveillance (14%-25%, 349-613/100 000, and 43-46/100 000, respectively). CONCLUSIONS: This multiyear analysis of laboratory-confirmed AGE surveillance from 4 VAMCs demonstrates dynamic intra- and interannual variability in prevalence and incidence of outpatient and inpatient community-acquired norovirus in US Veterans, highlighting the burden of norovirus disease in this adult population.
- Published
- 2020
20. Trends in Incidence of Norovirus-associated Acute Gastroenteritis in Four Veterans Affairs Medical Center Populations in the United States, 2011–2015
- Author
-
Grytdal, Scott, Browne, Hannah, Collins, Nikail, Vargas, Blanca, Rodriguez-Barradas, Maria C, Rimland, David, Beenhouwer, David O, Brown, Sheldon T, Goetz, Matthew Bidwell, Lucero-Obusan, Cynthia, Holodniy, Mark, Kambhampati, Anita, Parashar, Umesh, Vinjé, Jan, Lopman, Ben, Hall, Aron J, and Cardemil, Cristina V
- Subjects
Prevention ,Infectious Diseases ,Digestive Diseases ,Foodborne Illness ,Emerging Infectious Diseases ,Clinical Research ,Good Health and Well Being ,Adult ,Caliciviridae Infections ,Feces ,Gastroenteritis ,Genotype ,Georgia ,Humans ,Incidence ,Infant ,Los Angeles ,New York ,Norovirus ,Phylogeny ,Texas ,United States ,Veterans ,norovirus ,gastroenteritis ,veterans ,outpatients ,inpatients ,Biological Sciences ,Medical and Health Sciences ,Microbiology - Abstract
BackgroundNorovirus is an important cause of epidemic acute gastroenteritis (AGE), yet the burden of endemic disease in adults has not been well documented. We estimated the prevalence and incidence of outpatient and community-acquired inpatient norovirus AGE at 4 Veterans Affairs Medical Centers (VAMC) (Atlanta, Georgia; Bronx, New York; Houston, Texas; and Los Angeles, California) and examined trends over 4 surveillance years.MethodsFrom November 2011 to September 2015, stool specimens collected within 7 days of AGE symptom onset for clinician-requested diagnostic testing were tested for norovirus, and positive samples were genotyped. Incidence was calculated by multiplying norovirus prevalence among tested specimens by AGE-coded outpatient encounters and inpatient discharges, and dividing by the number of unique patients served.ResultsOf 1603 stool specimens, 6% tested were positive for norovirus; GII.4 viruses (GII.4 New Orleans [17%] and GII.4 Sydney [47%]) were the most common genotypes. Overall prevalence and outpatient and inpatient community-acquired incidence followed a seasonal pattern, with higher median rates during November-April (9.2%, 376/100 000, and 45/100 000, respectively) compared to May-October (3.0%, 131/100 000, and 13/100 000, respectively). An alternate-year pattern was also detected, with highest peak prevalence and outpatient and inpatient community-acquired norovirus incidence rates in the first and third years of surveillance (14%-25%, 349-613/100 000, and 43-46/100 000, respectively).ConclusionsThis multiyear analysis of laboratory-confirmed AGE surveillance from 4 VAMCs demonstrates dynamic intra- and interannual variability in prevalence and incidence of outpatient and inpatient community-acquired norovirus in US Veterans, highlighting the burden of norovirus disease in this adult population.
- Published
- 2020
21. A Clinical Trial to Evaluate the Safety and Immunogenicity of Norovirus Bivalent Vaccine
- Author
-
Lanzhou Institute of Biological Products Co., Ltd, Beijing Zhong Sheng Heng Yi Pharmaceutical Technology Co., Ltd., and Zhengzhou University
- Published
- 2021
22. Enteropathogen antibody dynamics and force of infection among children in low-resource settings.
- Author
-
Arnold, Benjamin F, Martin, Diana L, Juma, Jane, Mkocha, Harran, Ochieng, John B, Cooley, Gretchen M, Omore, Richard, Goodhew, E Brook, Morris, Jamae F, Costantini, Veronica, Vinjé, Jan, Lammie, Patrick J, and Priest, Jeffrey W
- Subjects
Humans ,Bacterial Infections ,Caliciviridae Infections ,Intestinal Diseases ,Parasitic ,Immunoglobulin G ,Antibodies ,Bacterial ,Antibodies ,Protozoan ,Antibodies ,Viral ,Longitudinal Studies ,Seroepidemiologic Studies ,Age Factors ,Developing Countries ,Child ,Kenya ,Tanzania ,Haiti ,Disease Transmission ,Infectious ,Epidemiological Monitoring ,Campylobacter jejuni ,Cryptosporidium parvum ,E. coli ,Entamoeba histolytica ,Giardia intestinalis ,Norovirus ,Salmonella enterica ,epidemiology ,global health ,virus ,Intestinal Diseases ,Parasitic ,Antibodies ,Bacterial ,Protozoan ,Viral ,Disease Transmission ,Infectious ,Biochemistry and Cell Biology - Abstract
Little is known about enteropathogen seroepidemiology among children in low-resource settings. We measured serological IgG responses to eight enteropathogens (Giardia intestinalis, Cryptosporidium parvum, Entamoeba histolytica, Salmonella enterica, enterotoxigenic Escherichia coli, Vibrio cholerae, Campylobacter jejuni, norovirus) in cohorts from Haiti, Kenya, and Tanzania. We studied antibody dynamics and force of infection across pathogens and cohorts. Enteropathogens shared common seroepidemiologic features that enabled between-pathogen comparisons of transmission. Overall, exposure was intense: for most pathogens the window of primary infection was
- Published
- 2019
23. Minimally Invasive Saliva Testing to Monitor Norovirus Infection in Community Settings
- Author
-
Pisanic, Nora, Ballard, Sarah-Blythe, Colquechagua, Fabiola D, François, Ruthly, Exum, Natalie, Yori, Pablo Peñataro, Schwab, Kellogg J, Granger, Douglas A, Detrick, Barbara, Olortegui, Maribel Paredes, Mayta, Holger, Sánchez, Gerardo J, Gilman, Robert H, Heaney, Christopher D, Vinjé, Jan, and Kosek, Margaret N
- Subjects
Emerging Infectious Diseases ,Foodborne Illness ,Clinical Research ,Infectious Diseases ,Digestive Diseases ,Genetics ,Infection ,Antibodies ,Viral ,Caliciviridae Infections ,Case-Control Studies ,Child ,Preschool ,Feces ,Humans ,Immunoglobulin G ,Norovirus ,Peru ,ROC Curve ,Reverse Transcriptase Polymerase Chain Reaction ,Saliva ,Sensitivity and Specificity ,norovirus ,saliva ,multiplex immunoassay ,noninvasive diagnostics ,MAL-ED ,Biological Sciences ,Medical and Health Sciences ,Microbiology - Abstract
BackgroundNorovirus is a leading cause of acute gastroenteritis worldwide. Routine norovirus diagnosis requires stool collection. The goal of this study was to develop and validate a noninvasive method to diagnose norovirus to complement stool diagnostics and to facilitate studies on transmission.MethodsA multiplex immunoassay to measure salivary immunoglobulin G (IgG) responses to 5 common norovirus genotypes (GI.1, GII.2, GII.4, GII.6, and GII.17) was developed. The assay was validated using acute and convalescent saliva samples collected from Peruvian children
- Published
- 2019
24. Comparison of Multiplex Gastrointestinal Pathogen Panel and Conventional Stool Testing for Evaluation of Diarrhea in Patients with Inflammatory Bowel Diseases
- Author
-
Ahmad, Waseem, Nguyen, Nghia H, Boland, Brigid S, Dulai, Parambir S, Pride, David T, Bouland, Daniel, Sandborn, William J, and Singh, Siddharth
- Subjects
Digestive Diseases ,Inflammatory Bowel Disease ,Autoimmune Disease ,Clinical Research ,Emerging Infectious Diseases ,Infectious Diseases ,Infection ,Adult ,Bacterial Infections ,Caliciviridae Infections ,Campylobacter ,Campylobacter Infections ,Clostridioides difficile ,Cohort Studies ,Culture Techniques ,Diarrhea ,Digestive System Surgical Procedures ,Disease Progression ,Dysentery ,Bacillary ,Emergency Service ,Hospital ,Enterocolitis ,Pseudomembranous ,Escherichia coli ,Escherichia coli Infections ,Feces ,Female ,Gastroenteritis ,Hospitalization ,Humans ,Inflammatory Bowel Diseases ,Intestinal Diseases ,Parasitic ,Male ,Middle Aged ,Norovirus ,Nucleic Acids ,Polymerase Chain Reaction ,Retrospective Studies ,Shigella ,Virus Diseases ,Young Adult ,Diagnostic testing ,Nucleic acid detection ,Overdiagnosis ,Complications ,Clostridium difficile ,Clinical Sciences ,Gastroenterology & Hepatology - Abstract
Background and aimsGastrointestinal pathogen panels (GPPs) are increasingly being used for evaluation of diarrhea. The impact of these tests on patients with inflammatory bowel diseases (IBD) is unknown. We performed a time-interrupted cohort study comparing GPPs and conventional stool evaluation in patients with IBD with diarrhea.MethodsWe included 268 consecutive patients with IBD who underwent GPP (BioFire Diagnostics®) (n = 134) or conventional stool culture and Clostridium difficile polymerase chain reaction testing (n = 134) during suspected IBD flare between 2012 and 2016. Primary outcome was composite of 30-day IBD-related hospitalization, surgery, or emergency department visit; secondary outcome was IBD treatment modification.ResultsOverall, 41/134 (30.6%) patients tested positive on GPP (18 C. difficile, 17 other bacterial infections, and 6 viral pathogens) versus 14/134 patients (10.4%, all C. difficile) testing positive on conventional testing. Rate of IBD treatment modification in response to stool testing was lower in GPP group as compared conventional stool testing group (35.1 vs. 64.2%, p
- Published
- 2019
25. Viral species richness and composition in young children with loose or watery stool in Ethiopia.
- Author
-
Aiemjoy, Kristen, Altan, Eda, Aragie, Solomon, Fry, Dionna M, Phan, Tung G, Deng, Xutao, Chanyalew, Melsew, Tadesse, Zerihun, Callahan, E Kelly, Delwart, Eric, and Keenan, Jeremy D
- Subjects
Feces ,Humans ,Viruses ,Norovirus ,Picornaviridae ,Caliciviridae Infections ,Picornaviridae Infections ,Diarrhea ,Prevalence ,Biodiversity ,Child ,Preschool ,Infant ,Infant ,Newborn ,Ethiopia ,Female ,Male ,Metagenomics ,Diarrheal disease ,Norwalk virus ,Viral infection ,Virome ,Digestive Diseases ,Pediatric ,Clinical Trials and Supportive Activities ,Vaccine Related ,Clinical Research ,Microbiology ,Clinical Sciences ,Medical Microbiology - Abstract
BackgroundStool consistency is an important diagnostic criterion in both research and clinical medicine and is often used to define diarrheal disease.MethodsWe examine the pediatric enteric virome across stool consistencies to evaluate differences in richness and community composition using fecal samples collected from children aged 0 to 5 years participating in a clinical trial in the Amhara region of Ethiopia. The consistency of each sample was graded according to the modified Bristol Stool Form Scale for children (mBSFS-C) before a portion of stool was preserved for viral metagenomic analysis. Stool samples were grouped into 29 pools according to stool consistency type. Differential abundance was determined using negative-binomial modeling.ResultsOf 446 censused children who were eligible to participate, 317 presented for the study visit examination and 269 provided stool samples. The median age of children with stool samples was 36 months. Species richness was highest in watery-consistency stool and decreased as stool consistency became firmer (Spearman's r = - 0.45, p = 0.013). The greatest differential abundance comparing loose or watery to formed stool was for norovirus GII (7.64, 95% CI 5.8, 9.5) followed by aichivirus A (5.93, 95% CI 4.0, 7.89) and adeno-associated virus 2 (5.81, 95%CI 3.9, 7.7).ConclusionsIn conclusion, we documented a difference in pediatric enteric viromes according to mBSFS-C stool consistency category, both in species richness and composition.
- Published
- 2019
26. Human Breastmilk in Young Children With Norovirus Infection of the Gut
- Author
-
Mothers' Milk Bank Northeast
- Published
- 2020
27. Evaluation of Infectivity and Illness of Norwalk GI.1 Virus Lot 001-09NV in the Human Challenge Model
- Author
-
Vaxart
- Published
- 2020
28. Prevalence of Human Noroviruses in Commercial Food Establishment Bathrooms
- Author
-
Leone, Cortney M, Dharmasena, Muthu, Tang, Chaoyi, DiCAPRIO, Erin, Ma, Yuanmei, Araud, Elbashir, Bolinger, Hannah, Rupprom, Kitwadee, Yeargin, Thomas, Li, Jianrong, Schaffner, Donald, Jiang, Xiuping, Sharp, Julia, Vinjé, Jan, and Fraser, Angela
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Caliciviridae Infections ,Disease Outbreaks ,Disinfection ,Female ,Food Contamination ,Food Handling ,Gastroenteritis ,Humans ,Male ,New Jersey ,Norovirus ,Ohio ,Prevalence ,South Carolina ,Toilet Facilities ,Bathrooms ,Environment ,Fomites ,Restaurants ,Retail food ,Strategic ,Defence & Security Studies - Abstract
Although transmission of human norovirus in food establishments is commonly attributed to consumption of contaminated food, transmission via contaminated environmental surfaces, such as those in bathrooms, may also play a role. Our aim was to determine the prevalence of human norovirus on bathroom surfaces in commercial food establishments in New Jersey, Ohio, and South Carolina under nonoutbreak conditions and to determine characteristics associated with the presence of human norovirus. Food establishments (751) were randomly selected from nine counties in each state. Four surfaces (underside of toilet seat, flush handle of toilet, inner door handle of stall or outer door, and sink faucet handle) were swabbed in male and female bathrooms using premoistened macrofoam swabs. A checklist was used to collect information about the characteristics, materials, and mechanisms of objects in bathrooms. In total, 61 (1.5%) of 4,163 swabs tested were presumptively positive for human norovirus, 9 of which were confirmed by sequencing. Some factors associated with the presence of human norovirus included being from South Carolina (odd ratio [OR], 2.4; 95% confidence interval [CI], 1.2 to 4.9; P < 0.05) or New Jersey (OR, 1.7; 95% CI, 0.9 to 3.3; 0.05 < P < 0.10), being a chain establishment (OR, 1.9; 95% CI, 1.1 to 3.3; P < 0.05), being a unisex bathroom (versus male: OR, 2.0; 95% CI, 0.9 to 4.1; 0.05 < P < 0.10; versus female: OR, 2.6; 95% CI, 1.2 to 5.7; P < 0.05), having a touchless outer door handle (OR, 3.3; 95% CI, 0.79 to 13.63; 0.05 < P < 0.10), and having an automatic flush toilet (OR, 2.5, 95% CI, 1.1 to 5.3; 0.05 < P < 0.10). Our findings confirm that the presence of human norovirus on bathroom surfaces in commercial food establishments under nonoutbreak conditions is a rare event. Therefore, routine environmental monitoring for human norovirus contamination during nonoutbreak periods is not an efficient method of monitoring norovirus infection risk.
- Published
- 2018
29. Norovirus Bivalent-Vaccine Efficacy Study
- Published
- 2019
30. Droplet Digital PCR for Precise Quantification of Human Norovirus in Shellfish Associated with Gastroenteritis Illness.
- Author
-
Rexin D, Kaas L, Langlet J, Croucher D, and Hewitt J
- Subjects
- Humans, Animals, Caliciviridae Infections, Polymerase Chain Reaction, Bivalvia virology, New Zealand, Norovirus isolation & purification, Shellfish virology, Gastroenteritis virology, Food Contamination analysis
- Abstract
Norovirus is the predominant cause of viral gastroenteritis globally with foodborne outbreaks commonly reported. Filter-feeding bivalve molluscan shellfish can become contaminated with norovirus when grown in waters impacted by inadequately treated effluent wastewater, overflows, or other human fecal sources. Contaminated shellfish pose a significant risk to consumers, because combined with a low norovirus infectious dose, oysters and mussels are often eaten raw or lightly cooked resulting in no or minimal virus inactivation, respectively. In addition, shellfish contamination has significant economic impacts on the seafood industry. To improve risk assessments, reverse transcription (RT)-digital droplet PCR (ddPCR) was used to determine the precise norovirus concentrations in 20 shellfish samples, all positive for norovirus genogroup I and/or II (GI or GII) by RT-quantitative PCR (qPCR), and associated with reported norovirus illness in New Zealand. Using RT-ddPCR, total norovirus GI and/or GII concentrations in shellfish ranged between 44 and 4,630 genome copies (GC)/g digestive tissue. Importantly, 40% (8/20) of shellfish samples contained a total norovirus concentration less than 200 GC/g digestive tissue. In parallel, RNase treatment was applied, prior to viral extraction to remove free viral RNA, which subsequently led to average reductions in norovirus GC/g concentration of 37.1% and 19.4% for GI and GII, respectively. These RT-ddPCR data provide valuable evidence for risk assessment of contaminated shellfish and evaluation of safety guidelines and highlight issues associated with setting a safe threshold of norovirus in shellfish., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
31. Targeting pediatric versus elderly populations for norovirus vaccines: a model-based analysis of mass vaccination options
- Author
-
Steele, Molly K, Remais, Justin V, Gambhir, Manoj, Glasser, John W, Handel, Andreas, Parashar, Umesh D, and Lopman, Benjamin A
- Subjects
Epidemiology ,Health Sciences ,Digestive Diseases ,Foodborne Illness ,Emerging Infectious Diseases ,Pediatric ,Biotechnology ,Infectious Diseases ,Vaccine Related ,Immunization ,Biodefense ,Prevention ,3.4 Vaccines ,Infection ,Good Health and Well Being ,Aged ,Caliciviridae Infections ,Child ,Hospitalization ,Humans ,Mass Vaccination ,Norovirus ,Vaccination ,Vaccines ,Transmission ,Mathematical modeling ,Herd immunity ,Clinical Sciences ,Public Health and Health Services - Abstract
BackgroundNoroviruses are the leading cause of acute gastroenteritis and foodborne diarrheal disease in the United States. Norovirus vaccine development has progressed in recent years, but critical questions remain regarding which age groups should be vaccinated to maximize population impact.MethodsWe developed a deterministic, age-structured compartmental model of norovirus transmission and immunity in the U.S.PopulationThe model was fit to age-specific monthly U.S. hospitalizations between 1996 and 2007. We simulated mass immunization of both pediatric and elderly populations assuming realistic coverages of 90% and 65%, respectively. We considered two mechanism of vaccine action, resulting in lower vaccine efficacy (lVE) between 22% and 43% and higher VE (hVE) of 50%.ResultsPediatric vaccination was predicted to avert 33% (95% CI: 27%, 40%) and 60% (95% CI: 49%, 71%) of norovirus episodes among children under five years for lVE and hVE, respectively. Vaccinating the elderly averted 17% (95% CI: 12%, 20%) and 38% (95% CI: 34%, 42%) of cases in 65+ year olds for lVE and hVE, respectively. At a population level, pediatric vaccination was predicted to avert 18-21 times more cases and twice as many deaths per vaccinee compared to elderly vaccination.ConclusionsThe potential benefits are likely greater for a pediatric program, both via direct protection of vaccinated children and indirect protection of unvaccinated individuals, including adults and the elderly. These findings argue for a clinical development plan that will deliver a vaccine with a safety and efficacy profile suitable for use in children.
- Published
- 2016
32. Identification of Host Factors of Norovirus Infections in Mini-Gut Model
- Author
-
CHAN CHI WAI, Assistant Professor
- Published
- 2018
33. Norovirus Management and Outcomes in a Multicenter Pediatric Kidney Transplant Population.
- Author
-
Engen RM, Keyser M, Jiang Z, and Kizilbash S
- Subjects
- Humans, Retrospective Studies, Child, Female, Male, Child, Preschool, Postoperative Complications epidemiology, Gastroenteritis virology, Treatment Outcome, Graft Rejection, Infant, Adolescent, Kidney Transplantation, Caliciviridae Infections, Norovirus, Diarrhea
- Abstract
Background: Norovirus is the most common cause of viral gastroenteritis. Studies in adult kidney recipients have documented significant morbidity associated with norovirus infection, but there are few studies in pediatric recipients., Methods: Multicenter retrospective cohort study of pediatric kidney transplant recipients with norovirus, confirmed by stool PCR, between January 1, 2008, and December 31, 2018. Outcomes of interest included duration of diarrhea, incidence of chronic diarrhea, management strategies, and graft function., Results: Forty pediatric kidney transplant recipients from four centers were identified for inclusion. Median age at transplant was 5.4 years (IQR 2.2-11.2 years), and median time post-transplant was 1.9 years (IQR 0.8-3.8 years). Median diarrheal duration was 16 days (IQR 6.0-41.5 days); 15 patients (43%) had acute diarrhea, 8 (23%) had persistent, and 12 (30%) had chronic diarrhea. Twenty-one (53%) patients developed acute kidney injury. Thirty-five (88%) patients required supplemental fluids, 8 (20%) patients underwent immunosuppression reduction for a median of 22 days, 5 (13%) were treated with nitazoxanide, and 5 (13%) received oral immunoglobulin. Acute rejection was diagnosed in 3 (8%) patients within 6 months of norovirus diagnosis. We observed no sustained decline in eGFR at 12 months after diarrhea resolution (median eGFR difference: 2.8 mL/min/1.73 m
2 [IQR: -17.1, 7.4]). Of the patients in the cohort, two lost their graft at 6.8 and 30.0 months after the onset of diarrhea., Conclusion: Norovirus is associated with significant morbidity in pediatric kidney transplant recipients. Various treatment interventions are being employed for norovirus infection. Larger studies, both observational and interventional, are needed to determine the optimal treatment., (© 2024 The Author(s). Pediatric Transplantation published by Wiley Periodicals LLC.)- Published
- 2024
- Full Text
- View/download PDF
34. Incidence of Medically-Attended Norovirus-Associated Acute Gastroenteritis in Four Veteran's Affairs Medical Center Populations in the United States, 2011-2012.
- Author
-
Grytdal, Scott P, Rimland, David, Shirley, S Hannah, Rodriguez-Barradas, Maria C, Goetz, Matthew Bidwell, Brown, Sheldon T, Lucero-Obusan, Cynthia, Holodniy, Mark, Graber, Christopher, Parashar, Umesh, Vinjé, Jan, and Lopman, Ben
- Subjects
Humans ,Norovirus ,Cross Infection ,Caliciviridae Infections ,Gastroenteritis ,Acute Disease ,Incidence ,Disease Outbreaks ,Genotype ,History ,21st Century ,Adult ,Aged ,Aged ,80 and over ,Middle Aged ,Hospitals ,Veterans ,United States ,Female ,Male ,Young Adult ,General Science & Technology - Abstract
An estimated 179 million acute gastroenteritis (AGE) illnesses occur annually in the United States. The role of noroviruses in hospital-related AGE has not been well-documented in the U. S. We estimated the population incidence of community- acquired outpatient and inpatient norovirus AGE encounters, as well as hospital-acquired inpatient norovirus AGE among inpatients at four Veterans Affairs (VA) Medical Centers (VAMCs). Fifty (4%) of 1,160 stool specimens collected ≤7 days from symptom onset tested positive for norovirus. During a one year period, the estimated incidence of outpatient, community- and hospital-acquired inpatient norovirus AGE was 188 cases, 11 cases, and 54 cases/ 100,000 patients, respectively. This study demonstrates the incidence of outpatient and community- and hospital-acquired inpatient norovirus AGE among the VA population seeking care at these four VAMCs.
- Published
- 2015
35. Secondary Lactose Intolerance Due to Chronic Norovirus Infection
- Published
- 2015
36. Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography.
- Author
-
Wang, Xue, Xu, Fengting, Liu, Jiasen, Gao, Bingquan, Liu, Yanxin, Zhai, Yujia, Ma, Jun, Zhang, Kai, Baker, Timothy S, Schulten, Klaus, Zheng, Dong, Pang, Hai, and Sun, Fei
- Subjects
Animals ,Rabbits ,Hemorrhagic Disease Virus ,Rabbit ,Capsid ,Caliciviridae Infections ,Viral Structural Proteins ,Capsid Proteins ,Cryoelectron Microscopy ,Crystallography ,X-Ray ,Sequence Alignment ,Amino Acid Sequence ,Protein Structure ,Tertiary ,Protein Binding ,Models ,Molecular ,Virology ,Microbiology ,Immunology ,Medical Microbiology - Abstract
Rabbit hemorrhagic disease, first described in China in 1984, causes hemorrhagic necrosis of the liver. Its etiological agent, rabbit hemorrhagic disease virus (RHDV), belongs to the Lagovirus genus in the family Caliciviridae. The detailed molecular structure of any lagovirus capsid has yet to be determined. Here, we report a cryo-electron microscopic (cryoEM) reconstruction of wild-type RHDV at 6.5 Å resolution and the crystal structures of the shell (S) and protruding (P) domains of its major capsid protein, VP60, each at 2.0 Å resolution. From these data we built a complete atomic model of the RHDV capsid. VP60 has a conserved S domain and a specific P2 sub-domain that differs from those found in other caliciviruses. As seen in the shell portion of the RHDV cryoEM map, which was resolved to ~5.5 Å, the N-terminal arm domain of VP60 folds back onto its cognate S domain. Sequence alignments of VP60 from six groups of RHDV isolates revealed seven regions of high variation that could be mapped onto the surface of the P2 sub-domain and suggested three putative pockets might be responsible for binding to histo-blood group antigens. A flexible loop in one of these regions was shown to interact with rabbit tissue cells and contains an important epitope for anti-RHDV antibody production. Our study provides a reliable, pseudo-atomic model of a Lagovirus and suggests a new candidate for an efficient vaccine that can be used to protect rabbits from RHDV infection.
- Published
- 2013
37. Interactions between human norovirus and intestinal microbiota/microbes: A scoping review.
- Author
-
Yang Y, An R, Lyu C, and Wang D
- Subjects
- Humans, Intestines, Gastrointestinal Microbiome, Norovirus genetics, Gastroenteritis, Caliciviridae Infections
- Abstract
Human norovirus (HuNoV) is an important foodborne virus, which causes non-bacterial acute gastroenteritis and is associated with a high disease burden. Recently, researchers have focus on the interaction between HuNoV and intestinal microbiota/microbes and engaged in studies investigating the implications of this interaction on HuNoV infection. However, the interaction mechanism and the implication of this interaction on host remain obscure. Current scoping review aimed to systematically investigate the interaction between HuNoV and intestinal microbiota, as well as their implication on HuNoV or HuNoV related symptoms. We found that HuNoV could bind to intestinal microbes and affect the intestinal microbial composition, diversity, and microbial gene expression. In reverse, intestinal microbes could affect HuNoV infectivity, although demonstrating contradictory effects (i.e., promote or inhibit HuNoV replication). These contradictory effects existed among microbes, in part, could be attributed to the differences among microbes (histo-blood group antigens and/or other small molecule substances). Results of current scoping review could assist in the selection and isolation of potential microbial candidates to prevent and/or alleviate HuNoV related symptoms., Competing Interests: Declaration of competing interest None., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
38. Current trends and new approaches for human norovirus replication in cell culture: a literature review.
- Author
-
Wasielewski VV, Itani TM, Zakharova YA, and Semenov AV
- Subjects
- Humans, Cell Culture Techniques, Cell Line, Host Microbial Interactions, Norovirus, Gastroenteritis, Caliciviridae Infections
- Abstract
Human norovirus (HuNoV) is one of the world's leading causes of acute gastroenteritis. At present, effective reproduction of the virus in cell cultures remains a challenge for virologists, as there is a lack of a permissive cell line that allows the entire viral life cycle to be reproduced. This is a barrier to the study of the HuNoV life cycle, its tropism, and virus-host interactions. It is also a major hurdle for the development of viral detection platforms, and ultimately for the development of therapeutics. The lack of an inexpensive, technically simple, and easily implemented cultivation method also negatively affects our ability to evaluate the efficacy of a variety of control measures (disinfectants, food processes) for human norovirus. In the process of monitoring this pathogen, it is necessary to detect infectious viral particles in water, food, and other environmental samples. Therefore, improvement of in vitro replication of HuNoV is still needed. In this review, we discuss current trends and new approaches to HuNoV replication in cell culture. We highlight ways in which previous research on HuNoV and other noroviruses has guided and influenced the development of new HuNoV culture systems and discuss the improvement of in vitro replication of HuNoV., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
- Published
- 2024
- Full Text
- View/download PDF
39. A non-human primate model for human norovirus infection.
- Author
-
Rimkute I, Chaimongkol N, Woods KD, Nagata BM, Darko S, Gudbole S, Henry AR, Sosnovtsev SV, Olia AS, Verardi R, Bok K, Todd JP, Woodward R, Kwong PD, Douek DC, Alves DA, Green KY, and Roederer M
- Subjects
- Humans, Animals, Macaca mulatta, Intestine, Small, Norovirus, Caliciviridae Infections, Vaccines
- Abstract
Norovirus infection can cause gastrointestinal disease in humans. Development of therapies and vaccines against norovirus have been limited by the lack of a suitable and reliable animal model. Here we established rhesus macaques as an animal model for human norovirus infection. We show that rhesus macaques are susceptible to oral infection with human noroviruses from two different genogroups. Variation in duration of virus shedding (days to weeks) between animals, evolution of the virus over the time of infection, induction of virus-specific adaptive immune responses, susceptibility to reinfection and preferential replication of norovirus in the jejunum of rhesus macaques was similar to infection reported in humans. We found minor pathological signs and changes in epithelial cell surface glycosylation patterns in the small intestine during infection. Detection of viral protein and RNA in intestinal biopsies confirmed the presence of the virus in chromogranin A-expressing epithelial cells, as it does in humans. Thus, rhesus macaques are a promising non-human primate model to evaluate vaccines and therapeutics against norovirus disease., (© 2024. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2024
- Full Text
- View/download PDF
40. Norovirus attribution study: Detection of norovirus from the commercial food preparation environment in outbreak and non-outbreak premises
- Author
-
Nicola C, Elviss, David J, Allen, Daniel, Kelly, Joyce Odeke, Akello, Sarah, Hau, Andrew J, Fox, Mark, Hopkins, Jade, Derrick, Sarah, O'Brien, and Miren, Iturriza-Gomara
- Subjects
Food Handling ,Norovirus ,Humans ,General Medicine ,Applied Microbiology and Biotechnology ,Caliciviridae Infections ,Gastroenteritis ,Disease Outbreaks ,Biotechnology - Abstract
Aims Norovirus remains the most significant virological risk that is transmitted via food and the environment to cause acute gastroenteritis. This study aimed to investigate the hypothesis that the contamination of the commercial food production environment with norovirus will be higher in premises that have recently reported a foodborne norovirus outbreak than those that have not. Methods Sampling of commercial food production environments was carried out across a 16-month period between January 2015 and April 2016 in the South East and the North West of England by local authority environmental health departments as part of routine surveillance visits to premises. A total of 2982 samples, 2038 virological and 944 bacteriological, were collected from 256 premises. Sixteen of these premises, six from South East and ten from North West England, were sampled as part of a public health outbreak investigation. Results & Conclusions Overall, 2038 swabs were submitted for norovirus testing, with an average of eight swabs per premises (range 4 to 23) and a median of seven. Of the premises sampled, 11.7% (30/256) yielded at least one norovirus-positive sample (environmental, and/or food handler hand swab), and 2.5% of the swabs were positive for norovirus. A peak in the positivity rate was seen in the South East in April 2016. No associations were found between norovirus positivity and bacteriology indicators, or between bacteriology indicators and hygiene ratings. Significance and impact of study This study demonstrates that food premises and food handlers remain a potential source of norovirus transmission and outbreaks.
- Published
- 2022
41. Dose Range Evaluation of Norovirus Challenge Pool (GII.4, CIN-1) (CIN-002)
- Author
-
LigoCyte Pharmaceuticals, Inc.
- Published
- 2014
42. A novel vaccine candidate against rabbit hemorrhagic disease virus 2 (RHDV2) confers protection in domestic rabbits
- Author
-
Angela M. Bosco-Lauth, Bethany Cominsky, Stephanie Porter, J. Jeffrey Root, Amber Schueler, Gary Anderson, Sara VanderWal, and Andy Benson
- Subjects
Vaccines ,General Veterinary ,Hemorrhagic Disease Virus, Rabbit ,Vaccination ,Animals ,Rabbits ,General Medicine ,Caliciviridae Infections - Abstract
OBJECTIVE To evaluate efficacy of a novel vaccine against rabbit hemorrhagic disease virus 2 (RHDV2) in domestic rabbits. ANIMALS 40 New Zealand White rabbits obtained from a commercial breeder. PROCEDURES Rabbits were vaccinated and held at the production facility for the duration of the vaccination phase and transferred to Colorado State University for challenge with RHDV2. Rabbits were challenged with oral suspensions containing infectious virus and monitored for clinical disease for up to 10 days. Rabbits that died or were euthanized following infection were necropsied, and livers were evaluated for viral RNA via RT-PCR. RESULTS None of the vaccinated animals (0/9) exhibited clinical disease or mortality following infection with RHDV2 while 9/13 (69%) of the control animals succumbed to lethal disease following infection. CLINICAL RELEVANCE The novel vaccine described herein provided complete protection against lethal infection following RHDV2 challenge. Outside of emergency use, there are currently no licensed vaccines against RHDV2 on the market in the United States; as such, this vaccine candidate would provide an option for control of this disease now that RHDV2 has become established in North America.
- Published
- 2022
43. Cluster of Norovirus Genogroup IX Outbreaks in Long-Term Care Facilities, Utah, USA, 2021
- Author
-
BreAnne, Osborn, Chao-Yang, Pan, April, Hatada, Jennifer, Hatfield, Jenni, Wagner, Kelly, Oakeson, Anna, Montmayeur, Christina, Morales, and Jan, Vinjé
- Subjects
Microbiology (medical) ,Infectious Diseases ,Genotype ,Epidemiology ,Utah ,Norovirus ,Humans ,Long-Term Care ,Caliciviridae Infections ,Disease Outbreaks - Abstract
We report 5 clustered acute gastroenteritis outbreaks in long-term care facilities in Utah, USA, that were linked to healthcare employees working at multiple facilities. Four outbreaks were caused by norovirus genotype GIX. We recommend continued norovirus surveillance and genotyping to determine contributions of this genotype to norovirus outbreaks.
- Published
- 2022
44. Viral replication site distribution for rabbit hemorrhagic disease virus 2 in formalin-fixed, paraffin-embedded tissues via in situ hybridization
- Author
-
Alicia D. O’Toole, Jian Zhang, Laura B. A. Williams, and Corrie C. Brown
- Subjects
Paraffin Embedding ,General Veterinary ,Hemorrhagic Disease Virus, Rabbit ,Formaldehyde ,Animals ,RNA ,Rabbits ,RNA Probes ,RNA, Messenger ,Virus Replication ,In Situ Hybridization ,Caliciviridae Infections - Abstract
We made 2 Z-based in situ hybridization (ISH) probes for the detection of rabbit hemorrhagic disease virus 2 (RHDV2; Lagovirus GI.2) nucleic acid in formalin-fixed, paraffin-embedded tissues from European rabbits ( Oryctolagus cuniculus) that had died during an outbreak of RHD in Washington, USA. One probe system was made for detection of negative-sense RNA (i.e., the replicative intermediate RNA for the virus), and the other probe system was constructed for detection of genomic and mRNA of the virus (viral mRNA). Tissue sets were tested separately, and the viral mRNA probe system highlighted much broader tissue distribution than that of the replicative intermediate RNA probe system. The latter was limited to liver, lung, kidney, spleen, myocardium, and occasional endothelial staining, whereas signal for the viral mRNA was seen in many more tissues. The difference in distribution suggests that innate phagocytic activity of various cell types may cause overestimation of viral replication sites when utilizing ISH of single-stranded, positive-sense viruses.
- Published
- 2022
45. Development and Characterization of Synthetic Norovirus RNA for Use in Molecular Detection Methods
- Author
-
Eun-Jung Cho, Younggil Cha, Su Kyung Lee, Han-Sung Kim, Jae-Seok Kim, Eun Jin Lee, Nuri Lee, Ki Ho Hong, Hee Jin Huh, Young Joo Cha, and Hyun Soo Kim
- Subjects
Genotype ,Norovirus ,Republic of Korea ,Biochemistry (medical) ,Clinical Biochemistry ,Humans ,RNA, Viral ,General Medicine ,Real-Time Polymerase Chain Reaction ,Caliciviridae Infections - Abstract
Reference materials are essential for the quality assurance of molecular detection methods. We developed and characterized synthetic norovirus GI and GII RNA reference materials.Norovirus GI and GII RNA sequences including the ORF1-ORF2 junction region were designed based on 1,495 reported norovirus sequences and synthesized via plasmid preparation andThe synthetic norovirus GI and GII RNAs were positively detected using the six commercial norovirus detection kits and were homogeneous and stable for one year when stored at -20°C or -70°C. All data from the five laboratories were within a range of 1.0 log copies/μL difference for each RNA, and the overall mean concentrations for norovirus GI and GII RNAs were 7.90 log copies/μL and 6.96 log copies/μL, respectively.The synthetic norovirus GI and GII RNAs are adequate for quality control based on commercial molecular detection reagents for noroviruses with high sequence variability. The synthetic RNAs can be used as reference materials in norovirus molecular detection methods.
- Published
- 2022
46. Molecular epidemiology and characterization of norovirus and sapovirus in pediatric patients with acute diarrhea in Thailand, 2019–2020
- Author
-
Phitchakorn Phengma, Pattara Khamrin, Nutthawadee Jampanil, Arpaporn Yodmeeklin, Nuthapong Ukarapol, Niwat Maneekarn, and Kattareeya Kumthip
- Subjects
Diarrhea ,Molecular Epidemiology ,Genotype ,Norovirus ,Public Health, Environmental and Occupational Health ,Infant ,General Medicine ,Thailand ,Sapovirus ,Feces ,Infectious Diseases ,Humans ,Child ,Phylogeny ,Caliciviridae Infections - Abstract
Human enteric pathogens in the family Caliciviridae including norovirus (NoV) and sapovirus (SaV) are associated with acute diarrheal disease globally and are considered as one of the viruses with high genetic diversity.In order to investigate the epidemiology of NoV and SaV in pediatric patients with acute diarrhea in Chiang Mai, Thailand from January 2019 to December 2020, a total of 675 stool specimens were collected and examined for the presence of NoV and SaV by RT-multiplex PCR.126 (18.7 %) and 6 (0.9 %) stool samples were positive for NoV and SaV, respectively. Mixed infection of NoV and SaV was detected in one patient (0.2 %). Among 10 different NoV strains detected in this study, NoV genogroup II genotype 4 (GII.4) Sydney 2012 was the most predominant genotype (51.2 %) followed by GII.3, GII.2, GII.6, GII.12, GII.7, GII.17, GI.4, GII.14, and GI.3. Interestingly, monthly distribution of NoV genotypes revealed that NoV GII.3 increased dramatically in August 2019, suggesting an outbreak of NoV GII.3 might occur in the community. In addition, 3 genotypes of SaV were detected in this study with SaV GI.1 being the most common genotype (71.4 %) followed by GI.2 and GII.5 (each at 14.3 %).This study demonstrates the prevalence and genetic diversity of NoV and SaV circulating in pediatric patients with acute gastroenteritis in Chiang Mai, Thailand during 2019-2020 and shows an emergence of NoV GII.3 infection in 2019.
- Published
- 2022
47. Utilizing blood filter paper and ear punch samples for the detection of rabbit hemorrhagic disease virus 2 by RT-rtPCR
- Author
-
Jessica E. Jennings-Gaines, Katie L. Luukkonen, Kara M. Robbins, William H. Edwards, Nadine A. Vogt, Adam A. Vogt, and Samantha E. Allen
- Subjects
Wyoming ,General Veterinary ,Hemorrhagic Disease Virus, Rabbit ,Animals ,Rabbits ,Hares ,Caliciviridae Infections - Abstract
Rabbit hemorrhagic disease virus 2 (RHDV2), a virulent and contagious viral pathogen that affects wild and domestic lagomorph populations, was identified in Wyoming, USA in December 2020. A surveillance program was developed involving full-carcass submission and liver analysis, although carcass quality as a result of predation and decomposition impeded analysis. To increase the number of submissions and provide flexibility to field staff, we evaluated 2 sample types: 77 dried blood on filter paper samples, 66 ear punch samples. At initial sampling, test specificity and sensitivity of the RT-rtPCR utilizing dried blood on filter paper and ear punch samples were both 100% compared to liver. Filter paper results were consistent over time; sensitivity stayed >96% through weeks 2, 4, and 6, with a maximum mean difference of 6.0 Ct from baseline liver Ct values (95% CI: 5.0–7.3) at 6 wk. Test sensitivity of the ear punch sample at 1, 3, 5, and 7 wk post-sampling remained at 100%, with a maximum mean difference of 5.6 Ct from baseline liver Ct values (95% CI: 4.3–6.9) at 5 wk. Filter paper and ear punch samples were suitable alternatives to liver for RHDV2 surveillance in wild lagomorph populations. Alternative sampling options provide more flexibility to surveillance programs, increase testable submissions, and decrease exposure of field personnel to zoonotic disease agents.
- Published
- 2023
48. Rotavirus and Norovirus Infections in Children Under 5 Years Old with Acute Gastroenteritis in Southwestern China, 2018–2020
- Author
-
Longyu Yang, Shulan Shi, Chen Na, Bai Li, Zhimei Zhao, Tao Yang, and Yufeng Yao
- Subjects
Rotavirus ,China ,Coinfection ,SARS-CoV-2 ,Norovirus ,COVID-19 ,Infant ,Rotavirus Infections ,Gastroenteritis ,Feces ,Child, Preschool ,Humans ,Child ,Caliciviridae Infections ,Retrospective Studies - Abstract
Objective Rotaviruses and noroviruses are important causes of acute gastroenteritis in children. While previous studies in China have mainly focused on rotavirus, we investigated the incidence of norovirus in addition to rotavirus in Southwestern China. Methods From January 2018 to December 2020, cases of rotavirus or norovirus infections among children under five ages with acute gastroenteritis were evaluated retrospectively. Results The detection rate of rotavirus was 24.5% (27,237/111,070) and norovirus was 26.1% (4649/17,797). Among 17,113 cases submitted for dual testing of both rotavirus and norovirus, mixed rotavirus/norovirus infections were detected in 5.0% (859/17,113) of cases. While there was no difference in norovirus incidence in outpatient compared to hospitalized cases, rotavirus was detected two times more in outpatients compared to hospitalized cases (26.6% vs.13.6%; P Conclusion Our results indicate that rotavirus and norovirus are still important viral agents in pediatric acute gastroenteritis in Southwestern China.
- Published
- 2022
49. Breadth and Dynamics of Human Norovirus-Specific Antibodies in the First Year of Life
- Author
-
Nadja A Vielot, Amanda Brinkman, Christina DeMaso, Samuel Vilchez, Lisa C Lindesmith, Filemon Bucardo, Yaoska Reyes, Ralph S Baric, Elizabeth P Ryan, Ralph Braun, and Sylvia Becker-Dreps
- Subjects
Infectious Diseases ,Norovirus ,Pediatrics, Perinatology and Child Health ,Humans ,General Medicine ,Child ,Antibodies, Viral ,Caliciviridae Infections ,Gastroenteritis - Abstract
We measured antibody binding to diverse norovirus virus-like particles over 12 months in 16 children. All had maternal antibodies at 2 months, with estimated lowest levels at 5 months of age. Antibody increases after 3 months suggested natural infections. This information could guide the timing of future norovirus vaccines.
- Published
- 2022
50. Validation of a point-of-need diagnostic tool for rapid diagnosis of norovirus gastroenteritis
- Author
-
Rajendra Prasad Janapatla, Chung-Chan Lee, Anna Dudek, Chih-Hsien Chuang, Shih-Yen Chen, Chih-Ho Lai, Chyi-Liang Chen, and Cheng-Hsun Chiu
- Subjects
Feces ,Genotype ,Point-of-Care Systems ,Norovirus ,Pediatrics, Perinatology and Child Health ,Humans ,Child ,Real-Time Polymerase Chain Reaction ,Phylogeny ,Caliciviridae Infections ,Gastroenteritis - Abstract
The genogroups GI and GII of norovirus (NoV) ribonucleic acid (RNA) genetic variants are the most prevalent cause of acute gastroenteritis outbreaks, especially in children, worldwide. A fast, accurate and convenient tool for diagnosis of NoV may be preferable to the more complicated performance of real-time reverse transcription-polymerase chain reaction (RT-PCR).In this study, we developed and evaluated a tool using insulated isothermal PCR (iiPCR)-mediated POCKIT Central NoV GI and NoV GII assay systems for diagnosis of NoV infection in pediatric patients suspected with gastroenteritis.Performance of POCKIT Central Norovirus GI and GII assays using RT-iiPCR, compared to regular real-time RT-PCR showed the same diagnosis rate to NoV GI (100% of total percent agreement and 1.0 of Cohen's kappa value) and a similar detection rate to norovirus GII (96.3% of total percent agreement and 0.92 of Cohen's kappa value). In exclusivity tests, the POCKIT Central NoV GI and GII assays showed negative results to other viruses, indicating that the assays may be a NoV-specific detection tool.POCKIT Central NoV GI and GII Assay systems can provide a simple, rapid, sensitive, and specific point-of-need diagnostic tool for the detection of NoV GI and GII RNAs in clinical specimens from children with acute gastroenteritis.
- Published
- 2022
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.