1. Establishment of genomic RNA reference materials for BCR-ABL1 P210 measurement.
- Author
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Yang, Yi, Wang, Xia, Niu, Chunyan, Zhou, Shujun, Gao, Huafang, Jin, Xiaohua, Wang, Shangjun, Du, Meihong, Cheng, Xiaoyan, Zhu, Lingxiang, and Dong, Lianhua
- Subjects
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REVERSE transcriptase polymerase chain reaction , *CHRONIC myeloid leukemia , *REFERENCE sources , *GENE fusion , *GENETIC transcription - Abstract
Quantitation of BCR-ABL1 with the quantitative reverse transcriptase polymerase chain reaction (RT-PCR) is very important in monitoring chronic myeloid leukemia (CML), which relies on an RNA reference material. A genomic RNA reference material (RM) containing the BCR-ABL1 P210 fusion mutation was developed, and an absolute quantitative method based on one-step reverse transcription digital PCR (RT-dPCR) was established for characterizing the RM. The proposed dPCR method demonstrates high accuracy and excellent analytical sensitivity, as shown by the linear relationship (0.94 < slope < 1.04, R2≧0.99) between the measured and nominal values of b2a2, b3a2, and ABL1-ref within the dynamic range (104–101 copies/reaction). Homogeneity and stability assessment based on dPCR indicated that the RM was homogeneous and stable for 24 months at −80 °C. The RM was used to evaluate inter-laboratory reproducibility in eight different laboratories, demonstrating that participating laboratories could consistently produce copy concentrations of b3a2 and ABL1-ref, as well as the BCR-ABL1/ABL1 ratio (CV < 2.0%). This work suggests that the RM can be employed in establishing metrological traceability for detecting mutations in the BCR-ABL1 fusion gene, as well as in quality control for testing laboratories. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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