13 results on '"CASPT2//CASSCF"'
Search Results
2. CASPT2//CASSCF studies on mechanistic photophysics of 3-hydroxyflavone.
- Author
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Chang, Xue-Ping, Fan, Feng-Ran, Zhao, Geng, Ma, Xiantao, Zhang, Teng-Shuo, and Xie, Bin-Bin
- Subjects
- *
DUAL fluorescence , *FLAVONOLS , *PROTONS , *PHOTOEXCITATION - Abstract
[Display omitted] 3-Hydroxyflavone (3-HF) as the backbone of flavonols has been extensively studied on the dual fluorescence and excited-state intramolecular proton transfer (ESIPT) after photoexcitation. However, its detailed excited-state relaxation mechanism is still unclear. Herein, the minimum-energy structures, conical intersections and singlet–triplet crossing points of 3-HF in the 1ππ∗, 1nπ∗, 3ππ∗, 3nπ∗, and S 0 states in the gas phase were first optimized by the CASPT2//CASSCF method. Then, the minimum-energy proton transfer (MEPT) and excited-state decay (ESD) pathways were calculated as well. Based on the calculation results, we proposed several possible ESD pathways from the initially populated bright S 2 (ππ*) state. The major channel is singlet-involved and stretch-torsion coupled ESIPT pathway. 3-HF in normal (N) form first undergoes efficient 1ππ* ESIPT with a small barrier of 2.2 kcal/mol to yield the 1ππ* proton-transferred tautomer (T). Subsequently, the T tautomer approaches the nearby accessible S 1 /S 0 conical intersection and then occurs internal conversion (IC) to fall back to the S 0 state. Finally, the S 0 species quickly transfers into the N conformer via the reverse ground state intramolecular proton transfer (GSIPT) to realize the ground-state recovery. In addition, the minor ESD pathways are involved less efficient intersystem crossing (ISC) processes. The present work could provide insights into understanding the photophysics of flavonols and their derivatives. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
3. On the role of the triplet state in the cis/ trans isomerization of rhodopsin: A CASPT2//CASSCF study of a model chromophore.
- Author
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González‐Luque, Remedios, Olaso‐González, Gloria, Merchán, Manuela, Coto, Pedro B., Serrano‐Andrés, Luis, and Garavelli, Marco
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TRIPLET state (Quantum mechanics) , *ISOMERIZATION , *RHODOPSIN , *MATHEMATICAL models , *PHOTOCHEMISTRY , *HYDROGEN , *QUANTUM chemistry , *CHEMICAL reactions , *QUANTUM perturbations - Abstract
The possibility of population of the lowest-lying triplet state ( T1) in the early events of the photochemical isomerization process of a model chromophore of Rhodopsin (Rh) has been analyzed using multireference perturbation theory (CASPT2//CASSCF) methods. It is shown that the characteristics of the isomerization process namely small S1− T1 gap, presence of hydrogen out of plane active vibrational modes, and existence of a dense manifold of vibrational states, render possible the fulfilment of the conditions needed for the population of T1. The possible consequences for the photochemistry and photophysics of Rh are also discussed. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem 111:3431-3437, 2011 [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
4. An artificial molecular switch that mimics the visual pigment and completes its photocycle in picoseconds.
- Author
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Sinicropia, Adalgisa, Martin, Elena, Ryazantsev, Mikhail, Helbing, Jan, Briande, Julien, Sharma, Divya, Léonarde, Jérémie, Haackeel, Stefan, Cannizz, Andrea, Chergui, Majed, Zanirato, Vinicio, Fusi, Stefania, Santor, Fabrizio, Basosi, Riccardo, Ferré, Nicolas, and Olivucci, Massimo
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MOLECULAR models , *PICOSECOND pulses , *TRANSDUCERS , *RHODOPSIN , *SPECTRUM analysis , *ISOMERIZATION - Abstract
Single molecules that act as light-energy transducers (e.g., converting the energy of a photon into atomic-level mechanical motion) are examples of minimal molecular devices. Here, we focus on a molecular switch designed by merging a conformationally locked diarylidene skeleton with a retinal-like Schiff base and capable of mimicking, in solution, different aspects of the transduction of the visual pigment Rhodopsin. Complementary ab initio multiconfigurational quantum chemistry-based computations and time-resolved spectroscopy are used to follow the light-induced isomerization of the switch in methanol. The results show that, similar to rhodopsin, the isomerization occurs on a 0.3-ps time scale and is followed by <10-ps cooling and solvation. The entire (2-photon-powered) switch cycle was traced by following the evolution of its infrared spectrum. These measurements indicate that a full cycle can be completed within 20 ps. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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- View/download PDF
5. Substituent-controlled photoisomerization in retinal chromophore models: Fluorinated and methoxy-substituted protonated Schiff bases
- Author
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Conti, Irene and Garavelli, Marco
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PHOTOISOMERIZATION , *SCHIFF bases , *QUANTUM chemistry , *POTENTIAL energy surfaces - Abstract
Abstract: The effect of substitution on the intrinsic (i.e. in vacuo) photoisomerization ability of retinal chromophore models has been explored using CASPT2//CASSCF minimum energy path computations to map the S1 photoisomerization paths of two substituted minimal models of the retinal chromophore: the 2-cis-penta-2,4-dieniminium and the all-trans-epta-2,4,6-trieniminium cations, which have been modified using fluorine or methoxyl substituents as representative examples of electron-withdrawing and electron-releasing groups, respectively. A systematic analysis has been performed involving substitutions in all the possible positions along the chain. It is shown that the photochemical reactivity and photoisomerization efficiency of these systems may be tuned or indeed changed, although this effect strongly depends on the position of the substituent. In particular, we have shown that (i) most of the systems preserves qualitatively the reactivity of the parent (i.e. unsubstituted) compound; (ii) substitution at positions C4 or C6 leads to a different relaxed excited state structure of the chromophore and in general to a very flat photoisomerization path (or to a tiny S1 energy barrier in some cases); (iii) the nature of the TICT state (i.e. the S1 →S0 decay funnel) may be turned from a conical intersection into an excited state minimum; (iv) for the C4 methoxy-substituted system the isomerization path as well as the S1/S0 decay funnel involve an unusual torsional angle. Thus, substitution turns out to be a good tool not only to tune the optical properties (i.e. the absorption and emission features) of the chromophore (as we have already shown in a previous work: I. Conti, F. Bernardi, G. Orlandi, M. Garavelli, Mol. Phys. 104 (2006) 915–924), but it may also play a crucial role in tuning and controlling photoisomerization selectivity and efficiency, affecting excited state lifetime and reaction rate. A rationale for these effects is presented, which provides a basis for understanding reactivity properties and the intrinsic photochemical behavior of substituted retinal chromophores. [Copyright &y& Elsevier]
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- 2007
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6. A theoretical study of the intramolecular charge transfer in 4-(dimethylamino)benzethyne
- Author
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Pedro B. Coto, Javier Segarra-Martí, J. Segarra-Martí, and P. B. Coto
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education.field_of_study ,Population ,General Physics and Astronomy ,Naturwissenschaftliche Fakultät ,Photochemistry ,Potential energy ,Benzonitrile ,chemistry.chemical_compound ,Photophysics ,chemistry ,Chemical physics ,Intramolecular force ,Excited state ,CASPT2//CASSCF ,Relaxation (physics) ,ddc:530 ,Singlet state ,Physical and Theoretical Chemistry ,Perturbation theory ,education - Abstract
We have investigated the non-adiabatic relaxation processes occurring in the singlet manifold of 4-(dimethylamino)benzethyne (DMABE){,} a molecule isoelectronic with 4-(dimethylamino)benzonitrile (DMABN) but lacking its characteristic dual fluorescence{,} using multireference perturbation theory methods. The results obtained point out to the existence of a two-fold decay mechanism in which the population of the initially accessed La state bifurcates towards a locally excited (LE) and a [small pi][sigma]* state. Further relaxation to an emitting intramolecular charge transfer (ICT) state is impeded due to the presence of pronounced energy barriers along their associated potential energy surfaces. These results provide further evidence of the role of [small pi][sigma]* states in the non-adiabatic relaxation processes of dialkylaminobenzonitriles.
- Published
- 2014
7. Tracking conformational dynamics of polypeptides by nonlinear electronic spectroscopy of aromatic residues: A first-principles simulation study
- Author
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Giulio Cerullo, Artur Nenov, Marco Garavelli, Ivan Rivalta, Shaul Mukamel, S. a Beccara, Dipartimento di Chimica 'G. Ciamician', Alma Mater Studiorum Università di Bologna [Bologna] (UNIBO), Laboratoire de Chimie - UMR5182 (LC), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Politecnico di Milano [Milan] (POLIMI), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École normale supérieure - Lyon (ENS Lyon)-Institut de Chimie du CNRS (INC), Artur Nenov, Silvio a Beccara, Ivan Rivalta, Giulio Cerullo, Shaul Mukamel, and Marco Garavelli
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Protein Denaturation ,Protein Folding ,Absorption spectroscopy ,Stacking ,Ab initio ,Abinitio calculations ,Charge transfer ,Conformation analysis ,Protein folding ,UV/Vis spectroscopy ,Proteins ,Spectrophotometry, Ultraviolet ,Molecular Dynamics Simulation ,Quantum Theory ,Atomic and Molecular Physics, and Optics ,Physical and Theoretical Chemistry ,010402 general chemistry ,01 natural sciences ,QM/MM ,Atomic ,Article ,Molecular dynamics ,Ultraviolet visible spectroscopy ,Particle and Plasma Physics ,Ab initio quantum chemistry methods ,Theoretical and Computational Chemistry ,Atomic and Molecular Physics ,0103 physical sciences ,Nuclear ,Spectroscopy ,Ultraviolet ,Quantitative Biology::Biomolecules ,Chemical Physics ,010304 chemical physics ,Chemistry ,ab initio calculations ,Molecular ,Chromophore ,0104 chemical sciences ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,Crystallography ,Chemical physics ,Spectrophotometry ,CASPT2//CASSCF ,Ab initio calculations ,and Optics ,Physical Chemistry (incl. Structural) - Abstract
International audience; The ability of nonlinear electronic spectroscopy to track folding/unfolding processes of proteins in solution by monitoring aromatic interactions is investigated by first-principles simulations of two-dimensional (2D) electronic spectra of a model peptide. A dominant reaction pathway approach is employed to determine the unfolding pathway of a tetrapeptide, which connects the initial folded configuration with stacked aromatic side chains and the final unfolded state with distant noninteracting aromatic residues. The π-stacking and excitonic coupling effects are included through ab initio simulations based on multiconfigurational methods within a hybrid quantum mechanics/molecular mechanics scheme. It is shown that linear absorption spectroscopy in the ultraviolet (UV) region is unable to resolve the unstacking dynamics characterized by the three-step process: T-shaped[RIGHTWARDS ARROW]twisted offset stacking[RIGHTWARDS ARROW]unstacking. Conversely, pump–probe spectroscopy can be used to resolve aromatic interactions by probing in the visible region, the excited-state absorptions (ESAs) that involve charge-transfer states. 2D UV spectroscopy offers the highest sensitivity to the unfolding process, by providing the disentanglement of ESA signals belonging to different aromatic chromophores and high correlation between the conformational dynamics and the quartic splitting.
- Published
- 2014
8. Disentangling peptide configurations via two-dimensional electronic spectroscopy: Ab initio simulations beyond the Frenkel exciton hamiltonian
- Author
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Giulio Cerullo, Artur Nenov, Marco Garavelli, Shaul Mukamel, Ivan Rivalta, Dipartimento di Chimica 'G. Ciamician', Alma Mater Studiorum Università di Bologna [Bologna] (UNIBO), Laboratoire de Chimie - UMR5182 (LC), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Politecnico di Milano [Milan] (POLIMI), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École normale supérieure - Lyon (ENS Lyon)-Institut de Chimie du CNRS (INC), Artur Nenov, Ivan Rivalta, Giulio Cerullo, Shaul Mukamel, and Marco Garavelli
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ultrafast nonlinear spectroscopy ,bidimensional electronic spectroscopy ,Exciton ,Ab initio ,Bioengineering ,QM/MM ,Molecular physics ,Spectral line ,aromatic amino acid side chains ,multiconfigurational methods ,protein structure ,SOS//QM/MM method ,Materials Science (all) ,symbols.namesake ,Spectroscopy, Photochemistry, and Excited States ,Quantum mechanics ,General Materials Science ,Physical and Theoretical Chemistry ,Spectroscopy ,Wave function ,Coupling ,Physics ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,CASPT2//CASSCF ,Physical Sciences ,Chemical Sciences ,symbols ,Hamiltonian (quantum mechanics) ,Vicinal - Abstract
Two-dimensional (2D) optical spectroscopy techniques based on ultrashort laser pulses have been recently extended to the optical domain in the ultraviolet (UV) spectral region. UV-active aromatic side chains can thus be used as local highly specific markers for tracking dynamics and structural rearrangements of proteins. Here we demonstrate that 2D electronic spectra of a model proteic system, a tetrapeptide with two aromatic side chains, contain enough structural information to distinguish between two different configurations with distant and vicinal side chains. For accurate simulations of the 2DUV spectra in solution, we combine a quantum mechanics/molecular mechanics approach based on wave function methods, accounting for interchromophores coupling and environmental effects, with nonlinear response theory. The proposed methodology reveals effects, such as charge transfer between vicinal aromatic residues that remain concealed in conventional exciton Hamiltonian approaches. Possible experimental setups are discussed, including multicolor experiments and signal manipulation techniques for limiting undesired background contributions and enhancing 2DUV signatures of specific electronic couplings. © 2014 American Chemical Society.
- Published
- 2014
9. Photoinduced Formation Mechanism of the Thymine−Thymine (6−4) Adduct
- Author
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Daniel Roca-Sanjuán, Angelo Giussani, Marco Garavelli, Luis Serrano-Andrés, Manuela Merchán, Angelo Giussani, Luis Serrano-André, Manuela Merchán, Daniel Roca-Sanjuán, and Marco Garavelli
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Models, Molecular ,Double bond ,Ultraviolet Rays ,photolesion ,Dimer ,Àcids nucleics ,Quantum yield ,thymine−thymine dimer ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Adduct ,DNA Adducts ,chemistry.chemical_compound ,0103 physical sciences ,Materials Chemistry ,Physical and Theoretical Chemistry ,chemistry.chemical_classification ,photochemistry ,010304 chemical physics ,Chemistry ,DNA ,3. Good health ,0104 chemical sciences ,Surfaces, Coatings and Films ,Thymine ,Intersystem crossing ,Pyrimidine Dimers ,Excited state ,CASPT2//CASSCF ,Quantum Theory ,Ground state ,Fisicoquímica - Abstract
The photoinduced mechanism leading to the formation of the thymine-thymine (6-4) photolesion has been studied by using the CASPT2//CASSCF approach over a dinucleotide model in vacuo. Following light absorption, localization of the excitation on a single thymine leads to fast singlet-triplet crossing that populates the triplet (3)(nπ*) state of thymine. This state, displaying an elongated C(4)═O bond, triggers (6-4) dimer formation by reaction with the C(5)═C(6) double bond of the adjacent thymine, followed by a second intersystem crossing, which acts as a gate between the excited state of the reactant and the ground state of the photoproduct. The requirement of localized excitation on just one thymine, whose main decay channel (by radiationless repopulation of its ground state) is nonphotochemical, can rationalize the experimentally observed low quantum yield of formation for the thymine-thymine (6-4) adduct.
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- 2013
10. Product Formation in Rhodopsin by Fast Hydrogen Motions
- Author
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Oliver Weingart, Andrea Bottoni, G. Orlandi, Marco Garavelli, Marco Stenta, Piero Altoè, O. Weingart, P. Altoè, M. Stenta, A. Bottoni, G. Orlandi, and M. Garavelli
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Isomerization ,HOOP ,Photoisomerization ,genetic structures ,Vision ,General Physics and Astronomy ,Surface hopping ,Photochemistry ,QM/MM ,Chromophore ,Isomerism ,PHOTOISOMERIZATION ,Physical and Theoretical Chemistry ,Event ,Cation ,biology ,Chemistry ,Cis trans isomerization ,Dynamics ,rhodopsin ,Rhodopsin ,Excited state ,Retinaldehyde ,CASPT2//CASSCF ,Protonated Schiff-Bases ,biology.protein ,Quantum Theory ,sense organs ,Simulation ,Model ,Hydrogen ,Visual phototransduction - Abstract
The photochemical cis-trans isomerization of retinal in rhodopsin is investigated by structure sampling and excited state QM/MM trajectories with surface hopping. The calculations uncover the motions responsible for photoproduct formation and elucidate the reasons behind the efficient photoisomerization in the primary event of visual transduction.
- Published
- 2011
11. Tracking the stilbene photoisomerization in the S1 state using RASSCF
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Gaia Tomasello, Marco Garavelli, Giorgio Orlandi, Laboratoire de Chimie - UMR5182 (LC), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Department of Computer Science [Verona] (UNIVR | DI), Università degli studi di Verona = University of Verona (UNIVR), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École normale supérieure - Lyon (ENS Lyon)-Institut de Chimie du CNRS (INC), University of Verona (UNIVR), Gaia Tomasello, Marco Garavelli, and Giorgio Orlandi
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Models, Molecular ,Work (thermodynamics) ,Photoisomerization ,RASSCF ,Molecular Conformation ,General Physics and Astronomy ,010402 general chemistry ,Tracking (particle physics) ,01 natural sciences ,Isomerism ,PHOTOISOMERIZATION ,Stilbenes ,0103 physical sciences ,Physical and Theoretical Chemistry ,ComputingMilieux_MISCELLANEOUS ,Physics ,010304 chemical physics ,State (functional analysis) ,Photochemical Processes ,Potential energy ,3. Good health ,0104 chemical sciences ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,Excited state ,CASPT2//CASSCF ,Quantum Theory ,Atomic physics ,Cis–trans isomerism - Abstract
In this work we compute the S1 potential energy curve responsible for stilbene cis–trans photoisomerisation employing the RASSCF approach, since the standard CASPT2//CASSCF protocol appears to be unsatisfactory in describing the stilbene S1 state. We find that RASSCF calculations, which are based on relatively few (but well chosen) configurations, produce qualitatively correct results and accurate relative excited state energies, both in the twisted and in the cis and trans regions of stilbene.
- Published
- 2013
12. An artificial molecular switch that mimics the visual pigment and completes its photocycle in picoseconds
- Author
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Majed Chergui, Adalgisa Sinicropi, Stefania Fusi, Divya Sharma, Andrea Cannizzo, Fabrizio Santoro, Riccardo Basosi, Jan Helbing, Massimo Olivucci, Jérémie Léonard, Stefan Haacke, Elena García Martín, Vinicio Zanirato, Nicolas Ferré, Mikhail N. Ryazantsev, Julien Briand, Institut de Physique et Chimie des Matériaux de Strasbourg (IPCMS), Université de Strasbourg (UNISTRA)-Matériaux et nanosciences d'Alsace (FMNGE), Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Réseau nanophotonique et optique, Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), Université Louis Pasteur - Strasbourg I-Centre National de la Recherche Scientifique (CNRS), University of Zurich, and Helbing, J
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10120 Department of Chemistry ,Time Factors ,Photochemistry ,Ab initio ,UV-vis ,010402 general chemistry ,01 natural sciences ,Quantum chemistry ,Molecular modeling ,Molecular switches ,Simulation and Modeling (artificial mol. switch mimics visual pigment and completes photocycle in picoseconds) ,Isomerization (photoisomerization ,artificial mol. switch mimics visual pigment and completes photocycle in picoseconds) ,Pigments (visual ,Isomerism ,Spectroscopy, Fourier Transform Infrared ,540 Chemistry ,mid-IR ,Spectroscopy ,photochemical switch ,Molecular switch ,1000 Multidisciplinary ,Multidisciplinary ,time resolved spectroscopy ,biology ,010405 organic chemistry ,Chemistry ,[SCCO.NEUR]Cognitive science/Neuroscience ,Molecular Mimicry ,Solvation ,0104 chemical sciences ,mol switch vision pigment photocycle isomerization ,Rhodopsin ,Chemical physics ,Physical Sciences ,CASPT2//CASSCF ,biology.protein ,Spectrophotometry, Ultraviolet ,Time-resolved spectroscopy ,Retinal Pigments ,Isomerization - Abstract
Single molecules that act as light-energy transducers (e.g., converting the energy of a photon into atomic-level mechanical motion) are examples of minimal molecular devices. Here, we focus on a molecular switch designed by merging a conformationally locked diarylidene skeleton with a retinal-like Schiff base and capable of mimicking, in solution, different aspects of the transduction of the visual pigment Rhodopsin. Complementary ab initio multiconfigurational quantum chemistry-based computations and time-resolved spectroscopy are used to follow the light-induced isomerization of the switch in methanol. The results show that, similar to rhodopsin, the isomerization occurs on a 0.3-ps time scale and is followed by
13. An Artificial Molecular Switch That Mimics the Visual Pigment and Completes Its Photocycle in Picoseconds
- Author
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Sinicropi, Adalgisa, Martin, Elena, Ryazantsev, Mikhail, Helbing, Jan, Briand, Julien, Sharma, Divya, Léonard, Jérémie, Haacke, Stefan, Cannizzo, Andrea, Chergui, Majed, Zanirato, Vinicio, Fusi, Stefania, Santoro, Fabrizio, Basosi, Riccardo, Ferré, Nicolas, and Olivucci, Massimo
- Published
- 2008
- Full Text
- View/download PDF
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