121 results on '"C. Dobkin"'
Search Results
2. Mr. Devis and Mr. Bull
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Katharine Baetjer and Josephine C. Dobkin
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Painting ,Portrait ,media_common.quotation_subject ,Museology ,Art history ,Performance art ,Conservation ,Art ,media_common - Abstract
The article discusses the 1747 conversation piece, or group portrait, painting "Mr. and Mrs. Richard Bull," by English artist Arthur Devis. The article offers biographical information on Richard and Mary Bull, focusing on Richard Bull's career as an extra-illustrator. The author traces the life and career of Devis and describes the composition of the painting in comparison to Devis's 1750 portrait of Mr. and Mrs. Robert Dashwood. Specific topics addressed include the rococo framing of the portrait in a manner similar to painter Francesco Zuccarelli, the interiors depicted in Devis's portraits, and Bull's extra-illustration of books by James Granger and Horace Walpole.
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- 2010
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- View/download PDF
3. The Laying of the Atlantic Cable: Paintings, Watercolors, and Commemorative Objects Given to the Metropolitan Museum by Cyrus W. Field
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Josephine C. Dobkin
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Painting ,Field (Bourdieu) ,media_common.quotation_subject ,Museology ,Conservation ,Art ,Laying ,Metropolitan area ,Visual arts ,media_common - Published
- 2006
- Full Text
- View/download PDF
4. Contents, Vol. 77, 1997
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A. Botta, K. Rojas, P. Zaragoza, X.-X. Zhang, M. Pritchard, B.P. Chowdhary, J.P. Park, J.L. Kissil, A. Rocchi, T.K. Watanabe, T. Siddque, N.P. Mertvetsov, W. Engel, A.A. Bosma, C. Rodellar, A. Arai, F. Shimizu, B. Hoebee, K.N. Sastry, R. Houlgatte, P.A. Voûte, N. Guo, U.W. Kenkare, J.-J. Cassiman, J. Guimera, W.R. Harrison, M.Z. Limongi, G. Mirza, A. Fratello, C.H. van Os, T. Ikeuchi, M. Chaffanet, T. Goldammer, M. Mannens, D. Grady, D. Wells, V. Romano, O. Miura, As. Ricco, M. Schwerin, M. Gersh, M.L. Filipenko, S.A. Wilcox, H. Levéziel, S.J. O’Brien, G.F.M. Merkx, C.C. Morton, G. Hardiman, R. Marzella, S. Hirosawa, T.J. Robinson, K.B.M. Reid, C. Elduque, A.S. Hewson, P.M.T. Deen, J.A. Squire, J.A.M. Graves, L. Vatteroni, E. Viegas-Péquignot, K. Yamamoto, M. Carter, L. Frönicke, N.V. Vorobieva, J. Overhauser, N. Ceratto, N.A. de Haan, M. Suzuki, T. Kozaki, M.S. Aly, B. Redeker, S. van Beersum, P.M. Borodin, F.F.B. Elder, A. Kimchi, A.S. Graphodatsky, B. Beatty, J.A. McMahon, M. de Meulemeester, J.B. Searle, I.V. Koroleva, W.Y. Hung, Y. Kuga, M. Jeanpierre, N. Sakuragawa, S. Feo, C. Auffray, M. Ogawa, M. Rocchi, M.P. Hande, C.K. Ullrich, J. Widmer, A. Ponce de León, F.O. Fackelmayer, S. Weremowicz, A. Pizzuti, K. Ohsugi, S. Okuno, R.J.M. Bindels, L.D. Matyakhina, A.P. McMahon, R. Leube, Y. Yang, A. Pandita, M. Lachtermacher, A. Tanzariello, B. Dallapiccola, M.A. Ferguson-Smith, A. Musio, A.F. Davies, D. Patterson, N. Lynch, Y. Nakamura, G. Rainaldi, M. Steenman, S.-T. Lee, H. Hayes, P.C.M. O’Brien, G.G. Karpova, C.H.M. Mellink, E. Jenkins, J.H. Xia, M. Schepens, A.T. Natarajan, B.-L. Lim, R. Meneveri, W.G. Nash, J. Kissing, M. Stacey, T. Fujiwara, M. Schmid, L.A. Witters, C. Zijlstra, L. Viggiano, F. Yang, M. Nagata, W. Bie, H. Scherthan, H. Murer, B. Ghebrehiwet, A. Westerveld, S. Kurata, H.N. Seuánez, M. Lovett, K.-H. Lee, R. Godbout, H.G. Brunner, J.M. Varley, P. Thygesen, R. Slater, S. Ishikawa, S.D. Pack, E. Takahashi, O.V. Cheryaukene, C. Bendixen, F. Ugolini, M. Matsumoto, R.M. Brunner, A. Risch, D. Birnbaum, Y. Takei, C.H. Fan, L.A. James, E.M. Ladenburger, P. Laurent, G. von Beust, T.K. Mohandas, H. Kobayashi, E. Burt, K. Wiesmeijer, M. Kai, A. Baldini, P. Eydoux, F.C. Canavez, F. Pelliccia, A. Geurts van Kessel, Déborah Bourc'his, S.-H. Park, S. Sebastian, C. Dobkin, R. Stanyon, R.A. Kastelein, L. Langbein, R. Toder, K. Okui, O.L. Serov, N. Matas, M.R. Koehler, R. Moyzis, J.F. Bazan, M.A. van Kuijck, A. Simons, P. Miniou, Y. Yokoyama, D. Molina Gomes, L. Xu, M.A.M. Moreira, H. Kim, E. Sim, J. Ragoussis, F. Saito-Ohara, M. Kool, N. Miyasaka, T. Katagiri, P. Bosco, X. Estivill, N. Archidiacono, G. Novelli, R. Knippers, P. Maccarone, J. Wienberg, M.-J. Pébusque, H.S. Tenenhouse, M. Nadal, W. Schwaeble, H. Hameister, H. van Bokhoven, T. Takahashi, E.I.B. Peerschke, V. Jurecic, X.-L. Yao, Y. Hey, P. Riegman, S.N. Malchenko, H.X. Deng, A.B. Spurdle, and N. Hoggard
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Botany ,Genetics ,Zoology ,Biology ,Molecular Biology ,Genetics (clinical) - Published
- 1997
- Full Text
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5. Power conditioning for notebook and palmtop systems
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Milt Wilcox, Carl T. Nelson, Dennis P. O'Neill, Tim Skovmand, Steve Pietkiewicz, and Robert C. Dobkin
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Battery (electricity) ,Engineering ,Hardware_GENERAL ,business.industry ,Electrical engineering ,Output impedance ,Power supply unit ,Internal resistance ,Converters ,business ,Sleep mode ,Electronic circuit ,Power (physics) - Abstract
Palmtop computer power supply designs present an entirely separate set of problems from notebook computers. Notebook machines typically use a 9–15 V NiCad stack for the power source. Palmtop machines, due to their extremely small size, have room for only two or four AA cells. The palmtop machines require much longer operating time in sleep mode, since they presently do not have disk drives. They also have lithium batteries for backup power when the AA cells are dead or being replaced. The use of these disposable batteries generates a separate set of problems from notebook computers. Unlike power supply systems powered by rechargeable NiCad or NiMH batteries, high efficiency power converter circuits are not necessarily optimum for use with disposable batteries. Since rechargeable batteries have very low output impedance, the most efficient converter circuits result in maximum operating time. Disposable cells, on the other hand, have relatively high internal impedance, which results in maximum battery life when the battery load is low and relatively constant. Power supply converters that minimize both the loss in the converter circuit and the effect of battery internal resistance give longest system operating life. Some of the four-cell designs presented in this chapter are optimized for low peak battery current to lengthen the disposable battery life. Also, the systems shown here provide power conditioning with high efficiency and low part count.
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- 2011
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6. Linkage analysis of the fragile X syndrome using a new DNA marker U6.2 defining locus DXS304
- Author
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U. Pettersson, N. Dahl, P. Bosco, C. Dobkin, W. T. Brown, Valentino Romano, A. C. Gross, N. Ceratto, P. Goonewardena, and Charles Ferrando
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Genetic Markers ,Male ,Risk ,congenital, hereditary, and neonatal diseases and abnormalities ,Prenatal diagnosis ,Locus (genetics) ,Biology ,Carrier testing ,Genetic linkage ,medicine ,Humans ,Genetics (clinical) ,X chromosome ,Recombination, Genetic ,Genetics ,medicine.disease ,Pedigree ,Fragile X syndrome ,Genetic marker ,Fragile X Syndrome ,Female ,Lod Score ,Restriction fragment length polymorphism ,DNA Probes ,Polymorphism, Restriction Fragment Length ,Software - Abstract
A new RFLP marker U6.2 defining the locus DXS304 was recently mapped to the distal long arm of the X chromosome. In the present study we report the results of genetic linkage analysis of 13 fragile X [fra(X)] families that were informative for the new marker. Analysis of the recombinants for F9-FRAXA, DXS105-FRAXA, DXS98-FRAXA, DXS52-FRAXA, DXS15-FRAXA, and F8C-FRAXA, places DXS304 distal and near to the FRAXA locus. Combined with results from previous studies, our results support the order Xcen.-F9-DXS105-DXS98-FRAXA-DXS304-DXS5 2-DXS15-F8C-Xqter. Close linkage was observed between DXS304 and the disease locus with a peak lod score of 5.12 at theta = 0.04 from the present study and, with a peak lod score of 17.45 at theta = 0.035 when our data are combined with published data from 2 other studies. The present study confirms that U6.2 is useful for prenatal diagnosis and carrier testing in families affected by fra(X) syndrome.
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- 1991
- Full Text
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7. Accelerated prenatal diagnosis of fragile X syndrome by polymerase chain reaction restriction fragment detection
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C, Dobkin, X, Ding, S, Li, G, Houck, S L, Nolin, A, Glicksman, N, Zhong, E C, Jenkins, and W T, Brown
- Subjects
Male ,Blotting, Southern ,Fetal Diseases ,Fragile X Mental Retardation Protein ,Pregnancy ,Fragile X Syndrome ,Prenatal Diagnosis ,Humans ,RNA-Binding Proteins ,Female ,Nerve Tissue Proteins ,Deoxyribonuclease HindIII ,Polymerase Chain Reaction - Abstract
Prenatal diagnosis of fragile X syndrome requires detection of the full FMR1 mutation in chorionic villus or amniotic fluid cell samples. Although analysis of genomic DNA restriction fragment pattern is a highly reliable technique for identification of the full FMR1 mutation, standard Southern blot determination of this pattern requires significantly more genomic DNA than is initially available from a prenatal sample. To overcome this limitation we developed a method that determines the diagnostic pattern of genomic restriction fragments from a fraction of a prenatal specimen. The prenatal DNA sample is first digested with EcoRI and EagI, and after agarose gel electrophoresis, the 2- to 10-kb region of the gel is serially sectioned and amplified by polymerase chain reaction. Analysis of prenatal samples from an unaffected male and from a full mutation male showed that this approach generated a diagnostic pattern comparable with a Southern blot of 100-fold more material. This innovation enables laboratories to prenatally diagnose the full FMR1 mutation sooner than standard techniques.
- Published
- 1999
8. A survey of FRAXE allele sizes in three populations
- Author
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N, Zhong, W, Ju, D, Curley, D, Wang, J, Pietrofesa, G, Wu, Y, Shen, C, Pang, P, Poon, X, Liu, S, Gou, E, Kajanoja, M, Ryynänen, C, Dobkin, and W T, Brown
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China ,Polymorphism, Genetic ,X Chromosome ,Base Sequence ,Molecular Sequence Data ,New York ,Chromosome Mapping ,Syndrome ,Polymerase Chain Reaction ,Europe ,Trinucleotide Repeats ,Fragile X Syndrome ,Intellectual Disability ,Ethnicity ,Humans ,Alleles ,Finland ,DNA Primers - Abstract
FRAXE is a fragile site located at Xq27-8, which contains polymorphic triplet GCC repeats associated with a CpG island. Similar to FRAXA, expansion of the GCC repeats results in an abnormal methylation of the CpG island and is associated with a mild mental retardation syndrome (FRAXE-MR). We surveyed the GCC repeat alleles of FRAXE from 3 populations. A total of 665 X chromosomes including 416 from a New York Euro-American sample (259 normal and 157 with FRAXA mutations), 157 from a Chinese sample (144 normal and 13 FRAXA), and 92 from a Finnish sample (56 normal and 36 FRAXA) were analyzed by polymerase chain reaction. Twenty-seven alleles, ranging from 4 to 39 GCC repeats, were observed. The modal repeat number was 16 in the New York and Finnish samples and accounted for 24% of all the chromosomes tested (162/665). The modal repeat number in the Chinese sample was 18. A founder effect for FRAXA was suggested among the Finnish FRAXA samples in that 75% had the FRAXE 16 repeat allele versus only 30% of controls. Sequencing of the FRAXE region showed no imperfections within the GCC repeat region, such as those commonly seen in FRAXA. The smaller size and limited range of repeats and the lack of imperfections suggests the molecular mechanisms underlying FRAXE triplet mutations may be different from those underlying FRAXA.
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- 1996
9. Reverse mutations in the fragile X syndrome
- Author
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W T, Brown, G E, Houck, X, Ding, N, Zhong, S, Nolin, A, Glicksman, C, Dobkin, and E C, Jenkins
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DNA Replication ,Genetic Markers ,Male ,Genetic Linkage ,Genetic Carrier Screening ,Gene Conversion ,RNA-Binding Proteins ,Nerve Tissue Proteins ,Nuclear Family ,Pedigree ,Fragile X Mental Retardation Protein ,Haplotypes ,Trinucleotide Repeats ,Fragile X Syndrome ,Mutation ,Humans ,Female - Abstract
Three females were identified who have apparent reversal of fragile X premutations. Based on haplotype analysis of nearby markers, they were found to have inherited a fragile X chromosome from their premutation carrier mothers, and yet had normal size FMR1 repeat alleles. The changes in repeat sizes from mother to daughter was 95 to 35 in the first, 145 to 43 in the second, and 82 to 33 in the third. In the first family, mutations of the nearby microsatellites FRAXAC2 and DXS548 were also observed. In the other two, only mutations involving the FMR1 repeats were found. We suggest differing mutational mechanisms such as gene conversion versus DNA replication slippage may underlie such reversions. We estimate that such revertants may occur among 1% or less of premutation carrier offspring. Our results indicate that women identified to be carriers by linkage should be retested by direct DNA analysis.
- Published
- 1996
10. Prenatal diagnosis and carrier screening for fragile X by PCR
- Author
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W T, Brown, S, Nolin, G, Houck, X, Ding, A, Glicksman, S Y, Li, S, Stark-Houck, P, Brophy, C, Duncan, C, Dobkin, and E, Jenkins
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Male ,Chorionic Villi Sampling ,Trinucleotide Repeats ,Pregnancy ,Fragile X Syndrome ,Genetic Carrier Screening ,Prenatal Diagnosis ,Mutation ,Amniocentesis ,Humans ,Female ,Polymerase Chain Reaction - Abstract
During the past three years, we have conducted fragile X DNA studies for carrier screening and prenatal diagnosis using a previously described PCR protocol that accurately resolves normal FMR1 alleles and premutations and detects most full mutations [Brown et al., JAMA 270:1569-1575, 1996]. A total of 344 pregnant women with a family history of mental retardation of unknown cause were screened and 6 fragile X carriers were identified: two had full mutations, and four had premutations. The mentally retarded relatives of two other women were found to be fragile X positive although the women themselves were not carriers. In all, 6 carriers and 8 fragile X families were identified by this screening. We have also screened 40 pregnant women who were members of previously identified fragile X families, but whose carrier status was unknown. Ten were found to be carriers and were offered prenatal diagnosis. Prospective prenatal testing of 84 carrier women correctly detected 31 fetal samples (19 females, 12 males) with full mutations and 6 with premutations (2 females, 4 males). No false positives but one false negative occurred early on due to undetected maternal cell contamination. In addition, screening of 806 males with developmental delays of unknown cause gave positive results in 33 (4.1%). Potential problems and pitfalls of direct DNA testing are discussed. Because of the proven success of fragile X screening with direct molecular analysis, screening of all undiagnosed individuals with mental retardation and at risk pregnant women should now be considered. The identification of fragile X carriers and prenatal diagnosis of their pregnancies should significantly reduce the prevalence of this syndrome.
- Published
- 1996
11. Positive fragile X microsatellite associations point to a common mechanism of dynamic mutation evolution
- Author
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W T, Brown, N, Zhong, and C, Dobkin
- Subjects
Evolution, Molecular ,Fragile X Mental Retardation Protein ,Letter ,Fragile X Syndrome ,Mutation ,Humans ,RNA-Binding Proteins ,Nerve Tissue Proteins ,Alleles ,Microsatellite Repeats - Published
- 1996
12. Rapid fragile X carrier screening and prenatal diagnosis using a nonradioactive PCR test
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W T, Brown, G E, Houck, A, Jeziorowska, F N, Levinson, X, Ding, C, Dobkin, N, Zhong, J, Henderson, S S, Brooks, and E C, Jenkins
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Base Sequence ,Genetic Carrier Screening ,Molecular Sequence Data ,DNA ,Polymerase Chain Reaction ,Pregnancy ,Fragile X Syndrome ,Prenatal Diagnosis ,Luminescent Measurements ,Humans ,Electrophoresis, Polyacrylamide Gel ,Female ,Oligonucleotide Probes ,Repetitive Sequences, Nucleic Acid - Abstract
To develop a rapid, nonradioactive test using the polymerase chain reaction (PCR) capable of detecting full fragile X mutations, premutations, and resolving normal alleles and to apply this to prenatal diagnosis and carrier screening of pregnant women at risk for fragile X carrier status.Prenatal and blood sample PCR analysis with confirmation by direct Southern blotting and cytogenetic techniques.Samples sent to a DNA diagnostic research laboratory at a tertiary referral center.Pregnant women with a family history of undiagnosed mental retardation or known fragile X syndrome and controls.A rapid, nonradioactive PCR screening protocol for the fragile X mental retardation-1 gene for both normal and mutant alleles was developed. Analysis of 570 control X chromosomes showed a modal number of 30 CGG repeats (range, 12 to 52 repeats) and a calculated heterozygosity of approximately 80%. No excess of homozygosity was found, indicating the test was accurate for normal allele resolution. In addition, 150 unrelated pregnant women were screened. Within known fragile X families, five of 20 pregnant women were diagnosed as carriers. Two new fragile X families were diagnosed among relatives of 130 females with family histories of undiagnosed mental retardation, although no carriers were identified. Prenatal PCR testing of 28 carriers accurately detected nine fetuses with full mutations.This rapid, nonradioactive PCR protocol allows accurate resolution of normal alleles as well as simultaneous detection of carrier alleles and full mutations. With this approach, efficient screening of pregnant women at risk for fragile X carrier status, subsequent genetic counseling of identified carriers, and reliable prenatal diagnosis can be offered.
- Published
- 1993
13. Molecular markers of fragile X: application to males at risk in fragile X families
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W T, Brown, P, Goonewardena, A C, Gross, C, Dobkin, and E C, Jenkins
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Genetic Markers ,Male ,Fragile X Syndrome ,Gene Expression ,Humans ,Female - Published
- 1991
14. Subject Index, Vol. 77, 1997
- Author
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A.S. Graphodatsky, G. Hardiman, J.A. Squire, L. Frönicke, P. Bosco, N. Ceratto, S. van Beersum, J.A.M. Graves, H.N. Seuánez, X. Estivill, N. Archidiacono, G. Novelli, G.G. Karpova, C.H.M. Mellink, E. Jenkins, M. Stacey, T. Fujiwara, M. Lovett, R. Knippers, R. Moyzis, M. Jeanpierre, P. Maccarone, J. Wienberg, M. Rocchi, C. Bendixen, S. Weremowicz, B.P. Chowdhary, Y. Yang, A. Pandita, M. Lachtermacher, N. Matas, K.-H. Lee, N. Miyasaka, T. Katagiri, F. Pelliccia, M.-J. Pébusque, R. Godbout, M. Gersh, R. Leube, F. Ugolini, M. Kai, S.-T. Lee, O. Miura, H.G. Brunner, O.V. Cheryaukene, K. Ohsugi, A. Tanzariello, M.A. Ferguson-Smith, A. Geurts van Kessel, P.C.M. O’Brien, W.G. Nash, A. Baldini, T.J. Robinson, M. Matsumoto, A. Pizzuti, Y. Nakamura, M. Mannens, V. Romano, A. Musio, J. Widmer, Déborah Bourc'his, A. Botta, K. Rojas, M.Z. Limongi, L.A. James, A.F. Davies, M. de Meulemeester, R.M. Brunner, C.H. van Os, J.H. Xia, T.K. Watanabe, E.M. Ladenburger, S.-H. Park, C. Rodellar, M. Pritchard, J.L. Kissil, A.S. Hewson, A. Arai, K.N. Sastry, P.M.T. Deen, P. Eydoux, J.A. McMahon, F.C. Canavez, L. Langbein, R. Toder, G. von Beust, M. Schmid, R. Houlgatte, T. Takahashi, P.A. Voûte, N.V. Vorobieva, J. Overhauser, R. Stanyon, E.I.B. Peerschke, K. Yamamoto, J.P. Park, T.K. Mohandas, S. Feo, C. Zijlstra, N.P. Mertvetsov, M. Steenman, U.W. Kenkare, S.A. Wilcox, J. Guimera, P. Zaragoza, N.A. de Haan, W.Y. Hung, J. Ragoussis, D. Birnbaum, M. Ogawa, H. Kobayashi, W. Engel, F. Shimizu, B. Hoebee, B. Ghebrehiwet, T. Ikeuchi, M. Chaffanet, W.R. Harrison, T. Goldammer, S. Ishikawa, E. Burt, K. Wiesmeijer, V. Jurecic, S.D. Pack, M.R. Koehler, B. Beatty, M. Nagata, E. Takahashi, J.F. Bazan, N. Lynch, M. Schwerin, Y. Yokoyama, G. Mirza, A. Fratello, D. Grady, D. Molina Gomes, F. Saito-Ohara, N. Hoggard, C. Dobkin, H. Scherthan, H. van Bokhoven, L.D. Matyakhina, R. Meneveri, A.P. McMahon, H. Murer, R. Marzella, K. Okui, J. Kissing, A. Risch, J.M. Varley, X.-L. Yao, M. Carter, X.-X. Zhang, H.S. Tenenhouse, S. Kurata, O.L. Serov, P.M. Borodin, M. Nadal, M.L. Filipenko, A. Rocchi, M. Kool, W. Schwaeble, H. Hayes, Y. Takei, H. Levéziel, S.J. O’Brien, P. Thygesen, C.H. Fan, H.X. Deng, M. Suzuki, H. Hameister, G.F.M. Merkx, R. Slater, P. Laurent, S. Sebastian, B. Redeker, R.A. Kastelein, E. Viegas-Péquignot, M.A. van Kuijck, L. Xu, M.A.M. Moreira, T. Kozaki, C.C. Morton, M.S. Aly, I.V. Koroleva, H. Kim, E. Sim, A. Ponce de León, A.B. Spurdle, A. Kimchi, A. Simons, G. Rainaldi, Y. Hey, P. Miniou, D. Wells, F.F.B. Elder, P. Riegman, D. Patterson, M. Schepens, S.N. Malchenko, L.A. Witters, L. Viggiano, S. Hirosawa, F. Yang, K.B.M. Reid, C. Elduque, C. Auffray, A.A. Bosma, N. Guo, J.-J. Cassiman, F.O. Fackelmayer, R.J.M. Bindels, A.T. Natarajan, B.-L. Lim, J.B. Searle, As. Ricco, N. Sakuragawa, L. Vatteroni, M.P. Hande, C.K. Ullrich, S. Okuno, T. Siddque, W. Bie, A. Westerveld, Y. Kuga, and B. Dallapiccola
- Subjects
Index (economics) ,Statistics ,Genetics ,Subject (documents) ,Biology ,Molecular Biology ,Genetics (clinical) - Published
- 1997
- Full Text
- View/download PDF
15. Reply to 'FRAXAC2 instability'
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W. T. Brown, C. Dobkin, and Nan Zhong
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Classical mechanics ,Genetics ,Biology ,Instability - Published
- 1994
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16. A glycine to serine polymorphism in the C-propeptide of the human type II procollagen
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M. Rasmussen, C. Dobkin, Henrik Vissing, Marina D'Alessio, Francesco Ramirez, and Brendan Lee
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Male ,chemistry.chemical_classification ,Base Sequence ,Molecular Sequence Data ,Glycine ,Biology ,Human type ,Molecular biology ,Peptide Fragments ,Pedigree ,Serine ,Procollagen peptidase ,Polymorphism (materials science) ,chemistry ,Genetics ,Humans ,Female ,Restriction fragment length polymorphism ,Glycoprotein ,Gene ,Polymorphism, Restriction Fragment Length ,Procollagen ,C propeptide - Published
- 1990
- Full Text
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17. Reversibility of IVS 2 missplicing in a mutant human beta-globin gene
- Author
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A Bank and C Dobkin
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Genetics ,Mutation ,Point mutation ,Mutant ,Intron ,Cell Biology ,Biology ,medicine.disease_cause ,Biochemistry ,Molecular biology ,RNA splicing ,medicine ,splice ,Globin ,Molecular Biology ,Gene - Abstract
We have studied the aberrant splicing of a human beta thalassemia globin gene by expression of the cloned gene in HeLa cells and oligomer-directed mutagenesis. A mutation 705 nucleotides into the large intervening sequence (IVS 2) of this gene leads to missplicing in which IVS 2 is incompletely removed, via two aberrant splices, from the vast majority of transcripts. One splice is from the 5' end of IVS 2 to a normal sequence 580 nucleotides into IVS 2 and another is from the mutated site 705 nucleotides into IVS 2 to the 3' end of the IVS. To study the splicing of this gene further, a mutation was introduced into the cryptic 3' splice site at position 580. This results in the complete removal of IVS 2 despite the presence of the thalassemia mutation at 705. The reversal of abnormal splicing by a change in the cryptic splice site suggests that the two abnormal splices are subtly interdependent. Thus, single base changes within IVS 2 can drastically alter the pattern of splicing in a human beta-globin gene.
- Published
- 1985
- Full Text
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18. Expression of a cloned Lepore globin gene
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C Dobkin, J Clyne, A Metzenberg, and A Bank
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hemic and lymphatic diseases ,Immunology ,Cell Biology ,Hematology ,Biochemistry - Abstract
Lepore globin is synthesized in markedly diminished amounts (approximately 10% to 15% of normal beta-globin) in human erythroid cells. To study the molecular mechanisms responsible for the diminished biosynthesis of Lepore globin, the Lepore-Boston gene was cloned from a charon phage DNA library and expressed in HeLa cells. Northern blotting and S1 nuclease analyses indicated that the Lepore gene produced less globin mRNA than a beta-gene and more than a delta-gene. The results indicate that expression of the Lepore-Boston gene in HeLa cells is reduced to an extent comparable to that seen in erythroid precursors in vivo. This indicates that the decrease in Lepore globin gene transcription is due to the delta-nucleotide sequences either in the 5′ flanking region or within this gene.
- Published
- 1986
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19. Logarithmic converters
- Author
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Robert C. Dobkin
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Engineering ,Signal processing ,Logarithm ,business.industry ,Dynamic range ,Bipolar junction transistor ,Hardware_PERFORMANCEANDRELIABILITY ,Converters ,law.invention ,law ,Hardware_INTEGRATEDCIRCUITS ,Operational amplifier ,Electronic engineering ,Electrical and Electronic Engineering ,Resistor ,business ,Hardware_LOGICDESIGN ,Electronic circuit - Abstract
Logarithmic converters have an important place in signal processing and the bipolar transistor can be an invaluable element for generating such functions. As with most any design, there are tradeoffs. With logarithmic converters composed of bipolar transistors, response time must be weighted against dynamic range. Several basic circuits for log and antilog generators, with differently weighted operating characteristics, are analyzed and, applications are described.
- Published
- 1969
- Full Text
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20. FMR1 CGG-Repeat Instability in Single Sperm and Lymphocytes of Fragile-X Premutation Males
- Author
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H. Blumstein, George E. Houck, W. T. Brown, A. D. Gargano, Sarah L. Nolin, and C. Dobkin
- Subjects
Adult ,Male ,congenital, hereditary, and neonatal diseases and abnormalities ,Somatic cell ,Nerve Tissue Proteins ,Semen ,Biology ,Germline ,Nuclear Family ,Andrology ,Fragile X Mental Retardation Protein ,Germline mutation ,Genetics ,medicine ,Humans ,Genetics(clinical) ,Lymphocytes ,FMR1 ,Germ-Line Mutation ,Genetics (clinical) ,Aged ,Trinucleotide-repeat disorders ,Age Factors ,RNA-Binding Proteins ,Middle Aged ,medicine.disease ,Spermatozoa ,Sperm ,Molecular biology ,Molecular Weight ,Fragile X syndrome ,Meiosis ,Single-cell analysis ,Fragile X Syndrome ,Mutation ,Fragile X ,Female ,Trinucleotide Repeat Expansion ,Trinucleotide repeat expansion ,Research Article - Abstract
SummaryTo determine the meiotic instability of the CGG-triplet repeat in the fragile-X gene, FMR1, we examined the size of the repeat in single sperm from four premutation males. The males had CGG-repeat sizes of 68, 75, 78, and 100, as determined in peripheral blood samples. All samples showed a broad range of variations, with expansions more common than contractions. Examination of single lymphocytes indicated that somatic cells were relatively more stable than sperm. Surprisingly, the repeats in sperm from the 75- and 78-repeat males had very different size ranges and distribution patterns despite the similarity of the repeat size and AGG interruption in their somatic cells. These results suggest that cis or trans factors may have a role in male germline repeat instability.
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21. Modification of the rabbit chromosomal beta-globin gene by restructuring and site-directed mutagenesis
- Author
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H. WEBER, P. DIERKS, F. MEYERS, A. VAN OOYEN, C. DOBKIN, M. KAPPLER, B. MEYHACK, A. ZELTNER, E. E. MULLEN, C. W.E.I.S.S.M.A.N.N., ABRESCIA, PAOLO, D.D. BROWN, C. FOX, H., Weber, P., Dierk, F., Meyer, A., VAN OOYEN, C., Dobkin, Abrescia, Paolo, M., Kappler, B., Meyhack, A., Zeltner, E. E., Mullen, and C. W. E. I. S. S. M. A. N., N.
- Subjects
beta globin ,cloning ,in vitro synthesis ,site-directed mutagenesi - Abstract
Use of site-directed mutagenesis for promoting the synthesis of variants of beta-globin. Genetic engineering technology provided tools for isolating mRNA, cloning, DNA modification, and code changes for protein in coupled transcription-translation systems.
- Published
- 1981
22. Erythroleukemia (K562) Cells Contain a Functional β-Globin Gene
- Author
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M, Donovan-Peluso, K, Young, C, Dobkin, and A, Bank
- Subjects
Suppression, Genetic ,Genes ,Transcription, Genetic ,hemic and lymphatic diseases ,Humans ,Leukemia, Erythroblastic, Acute ,Cell Biology ,Cloning, Molecular ,Transfection ,Molecular Biology ,Globins ,HeLa Cells ,Research Article - Abstract
K562 cells are human erythroid cells that synthesize embryonic and fetal globins but not adult beta-globin. A cloned beta-globin gene was isolated from K562 cells and transfected into HeLa cells. The RNA transcripts produced were comparable in both amount and size to those obtained with a normal beta-globin gene.
- Published
- 1984
- Full Text
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23. Beta-thalassemia syndromes
- Author
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A, Bank and C, Dobkin
- Subjects
Base Sequence ,Genes ,Genetic Code ,Mutation ,DNA, Recombinant ,Humans ,Thalassemia ,Syndrome ,Globins - Abstract
In summary, the beta-thalassemias are due to defects in or around the structural beta-globin gene. In some Indian patients, there is deletion of sequence at the 3' end of the beta-globin gene. Most commonly, single nucleotide mutations cause beta(+)- and beta(0) -thalassemia. More than 30 such mutations have been identified. Defects in the promoter region 5' to the gene as far 5' as -87 and closer to the gene at -27 and -28 in the ATA sequence can cause beta (+)-thalassemia. Single nucleotide changes in coding regions leading to termination or nonsense codons commonly cause beta (0)-thalassemia. In addition, beta(0)-thalassemia can be due to single nucleotide changes in the invariant GT at the 5' splice junction in IVS 1 and 2 and in the AG at the 3' end of IVS 2. Additionally, single nucleotide mutations can occur within IVS that result in both beta(+)- and beta(0)-thalassemia. New splice sites are usually the result of these single nucleotide mutations, and they lead to new, abnormal splicing patterns. In some instances, beta (+)-thalassemia results when a new splice signal created within IVS is still associated with some continued normal splicing as well as with abnormal splicing. The abnormal splicing leads to abnormal mRNA, while the normal splicing leads to some normal mRNA and the beta (+)-pheno-single In other cases, such as with the defect as position 705 of IVS 2, the single nucleotide change within the IVS allows only abnormal mRNA splicing, and it results in beta (0)-thalassemia.(ABSTRACT TRUNCATED AT 250 WORDS)
- Published
- 1987
24. A nucleotide change in IVS 2 of a beta-thalassemia gene leads to a cryptic splice not at the site of the mutation
- Author
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C, Dobkin and A, Bank
- Subjects
Base Sequence ,RNA Splicing ,Mutation ,Chromosome Mapping ,Humans ,Thalassemia ,Globins - Published
- 1983
25. Reversibility of IVS 2 missplicing in a mutant human beta-globin gene
- Author
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C, Dobkin and A, Bank
- Subjects
Base Sequence ,Genes ,RNA Splicing ,Genetic Vectors ,Mutation ,Humans ,Thalassemia ,DNA ,Cloning, Molecular ,Globins ,HeLa Cells - Abstract
We have studied the aberrant splicing of a human beta thalassemia globin gene by expression of the cloned gene in HeLa cells and oligomer-directed mutagenesis. A mutation 705 nucleotides into the large intervening sequence (IVS 2) of this gene leads to missplicing in which IVS 2 is incompletely removed, via two aberrant splices, from the vast majority of transcripts. One splice is from the 5' end of IVS 2 to a normal sequence 580 nucleotides into IVS 2 and another is from the mutated site 705 nucleotides into IVS 2 to the 3' end of the IVS. To study the splicing of this gene further, a mutation was introduced into the cryptic 3' splice site at position 580. This results in the complete removal of IVS 2 despite the presence of the thalassemia mutation at 705. The reversal of abnormal splicing by a change in the cryptic splice site suggests that the two abnormal splices are subtly interdependent. Thus, single base changes within IVS 2 can drastically alter the pattern of splicing in a human beta-globin gene.
- Published
- 1985
26. Regulation of human globin gene expression
- Author
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A, Bank, M, Donovan-Peluso, K, Young, K, Kosche, R M, Cubbon, and C, Dobkin
- Subjects
Base Sequence ,Transcription, Genetic ,Single-Strand Specific DNA and RNA Endonucleases ,DNA ,DNA Restriction Enzymes ,Endonucleases ,Cell Line ,Globins ,Gene Expression Regulation ,Mutation ,Humans ,Leukemia, Erythroblastic, Acute ,RNA, Messenger ,Deoxyribonucleases, Type II Site-Specific - Published
- 1985
27. Structure and expression of two beta genes in a beta thalassemia homozygote
- Author
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K, Young, L, Margulies, M, Donovan-Peluso, J, Clyne, M C, Driscoll, C, Dobkin, D, Leibowitz, G, Russo, G, Schiliro, and A, Bank
- Subjects
Base Sequence ,Gene Expression Regulation ,Genes ,Homozygote ,Humans ,Thalassemia ,Cloning, Molecular ,Globins ,HeLa Cells - Abstract
Two beta globin gene alleles have been cloned and characterized from a patient with beta + thalassemia. Both beta genes have single base mutations in the small intervening sequence (IVS 1); one 6 nucleotides and the other 110 nucleotides from the 5' end of IVS 1. Both genes lead to abnormal splicing of beta globin mRNA precursors when expressed in HeLa cells. Despite the fact that both alleles produce some normal beta globin mRNA transcripts, the patient has clinically severe beta + thalassemia (Cooley's anemia).
- Published
- 1985
28. Terminal adenylation in the synthesis of RNA by Q beta replicase
- Author
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J N, Bausch, F R, Kramer, E A, Miele, C, Dobkin, and D R, Mills
- Subjects
Kinetics ,RNA, Bacterial ,Base Sequence ,Escherichia coli ,Q beta Replicase ,Genetic Variation ,Nucleic Acid Hybridization ,RNA Nucleotidyltransferases ,Templates, Genetic ,Coliphages - Abstract
We investigated the apparent requirement that Q beta replicase must add a nontemplated adenosine to the 3' end of newly synthesized RNA strands. We used abbreviated MDV-1 (+)-RNA templates that lacked either 62 or 63 nucleotides at their 5' end in Q beta replicase reactions. The MDV-1 (-)-RNA strands synthesized from these abbreviated (+)-strand templates were released from the replication complex, yet they did not possess a nontemplated 3'-terminal adenosine. These results imply that, despite observations that all naturally occurring RNAs synthesized by Q beta replicase possess a nontemplated 3'-adenosine, the addition of an extra adenosine is not an obligate step for the release of completed strands. Since the abbreviated templates lacked a normal 5' end, it is probable that a particular sequence at the 5' end of the template is required for terminal adenylation to occur.
- Published
- 1983
29. MODIFICATION OF THE RABBIT CHROMOSOMAL β-GLOBIN GENE BY RESTRUCTURING AND SITE-DIRECTED MUTAGENESIS
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C. Dobkin, M. Kappeler, B. Meyhack, A. Zeltner, Hans Weber, E.E. Mullen, A.J.J. van Ooyen, Charles Weissmann, P. Dierks, François Meyer, and P. Abrescia
- Subjects
Genetics ,Messenger RNA ,RNA splicing ,Intron ,Mutagenesis (molecular biology technique) ,A-DNA ,Biology ,Site-directed mutagenesis ,Gene ,Molecular biology ,Stop codon - Abstract
Modifications were introduced into the rabbit chromosomal β-globin gene by 1) gene restructuring techniques, leading to a variety of internal and external deletions and deletion/substitutions, 2) site-directed mutagenesis involving the incorporation of a mutagenic deoxynucleoside triphosphate into specific sites of a DNA. The modifications affect the 5′-flanking sequences including putative promoter sites, the 5′-non-coding region of the mRNA sequence, introns and splicing sites, and the termination codon.
- Published
- 1981
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30. A PvuII RFLP detected in the human prion protein (PrP) gene
- Author
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Ye Wu, P. Merz, H. M. Wisniewski, Evelyn A. Devine-Gage, Brown Wt, Nikolaos K. Robakis, and C. Dobkin
- Subjects
Genetics ,Male ,Polymorphism, Genetic ,biology ,Chromosomes, Human, Pair 20 ,DNA Restriction Enzymes ,Molecular biology ,Restriction fragment ,Pedigree ,Genes ,biology.protein ,Prnp gene ,Humans ,Female ,Restriction fragment length polymorphism ,Prion protein ,Deoxyribonucleases, Type II Site-Specific ,Gene ,Polymorphism, Restriction Fragment Length - Published
- 1987
31. Involvement of Type 10 17β-Hydroxysteroid Dehydrogenase in the Pathogenesis of Infantile Neurodegeneration and Alzheimer's Disease.
- Author
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He XY, Frackowiak J, Dobkin C, Brown WT, and Yang SY
- Subjects
- Animals, Humans, Mice, Alcohol Dehydrogenase metabolism, Brain metabolism, 17-Hydroxysteroid Dehydrogenases genetics, 17-Hydroxysteroid Dehydrogenases metabolism, Alzheimer Disease metabolism
- Abstract
Type 10 17β-hydroxysteroid dehydrogenase (17β-HSD10) is the HSD17B10 gene product playing an appreciable role in cognitive functions. It is the main hub of exercise-upregulated mitochondrial proteins and is involved in a variety of metabolic pathways including neurosteroid metabolism to regulate allopregnanolone homeostasis. Deacetylation of 17β-HSD10 by sirtuins helps regulate its catalytic activities. 17β-HSD10 may also play a critical role in the control of mitochondrial structure, morphology and dynamics by acting as a member of the Parkin/PINK1 pathway, and by binding to cyclophilin D to open mitochondrial permeability pore. 17β-HSD10 also serves as a component of RNase P necessary for mitochondrial tRNA maturation. This dehydrogenase can bind with the Aβ peptide thereby enhancing neurotoxicity to brain cells. Even in the absence of Aβ, its quantitative and qualitative variations can result in neurodegeneration. Since elevated levels of 17β-HSD10 were found in brain cells of Alzheimer's disease (AD) patients and mouse AD models, it is considered to be a key factor in AD pathogenesis. Since data underlying Aβ-binding-alcohol dehydrogenase (ABAD) were not secured from reported experiments, ABAD appears to be a fabricated alternative term for the HSD17B10 gene product. Results of this study would encourage researchers to solve the question why elevated levels of 17β-HSD10 are present in brains of AD patients and mouse AD models. Searching specific inhibitors of 17β-HSD10 may find candidates to reduce senile neurodegeneration and open new approaches for the treatment of AD.
- Published
- 2023
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- View/download PDF
32. Infantile Neurodegeneration Results from Mutants of 17β-Hydroxysteroid Dehydrogenase Type 10 Rather Than Aβ-Binding Alcohol Dehydrogenase.
- Author
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He XY, Dobkin C, Brown WT, and Yang SY
- Subjects
- Humans, Mutation, Missense, Alcohol Dehydrogenase genetics, Alzheimer Disease genetics, 3-Hydroxyacyl CoA Dehydrogenases
- Abstract
Type 10 17β-hydroxysteroid dehydrogenase (17β-HSD10), a homo-tetrameric multifunctional protein with 1044 residues encoded by the HSD17B10 gene, is necessary for brain cognitive function. Missense mutations result in infantile neurodegeneration, an inborn error in isoleucine metabolism. A 5-methylcytosine hotspot underlying a 388-T transition leads to the HSD10 (p.R130C) mutant to be responsible for approximately half of all cases suffering with this mitochondrial disease. Fewer females suffer with this disease due to X-inactivation. The binding capability of this dehydrogenase to Aβ-peptide may play a role in Alzheimer's disease, but it appears unrelated to infantile neurodegeneration. Research on this enzyme was complicated by reports of a purported Aβ-peptide-binding alcohol dehydrogenase (ABAD), formerly referred to as endoplasmic-reticulum-associated Aβ-binding protein (ERAB). Reports concerning both ABAD and ERAB in the literature reflect features inconsistent with the known functions of 17β-HSD10. It is clarified here that ERAB is reportedly a longer subunit of 17β-HSD10 (262 residues). 17β-HSD10 exhibits L-3-hydroxyacyl-CoA dehydrogenase activity and is thus also referred to in the literature as short-chain 3-hydorxyacyl-CoA dehydrogenase or type II 3-hydorxyacyl-CoA dehydrogenase. However, 17β-HSD10 is not involved in ketone body metabolism, as reported in the literature for ABAD. Reports in the literature referring to ABAD (i.e., 17β-HSD10) as a generalized alcohol dehydrogenase, relying on data underlying ABAD's activities, were found to be unreproducible. Furthermore, the rediscovery of ABAD/ERAB's mitochondrial localization did not cite any published research on 17β-HSD10. Clarification of the purported ABAD/ERAB function derived from these reports on ABAD/ERAB may invigorate this research field and encourage new approaches to the understanding and treatment of HSD17B10 -gene-related disorders. We establish here that infantile neurodegeneration is caused by mutants of 17β-HSD10 but not ABAD, and so we conclude that ABAD represents a misnomer employed in high-impact journals.
- Published
- 2023
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- View/download PDF
33. 3-Hydroxyacyl-CoA and Alcohol Dehydrogenase Activities of Mitochondrial Type 10 17β-Hydroxysteroid Dehydrogenase in Neurodegeneration Study.
- Author
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He XY, Dobkin C, Brown WT, and Yang SY
- Subjects
- 17-Hydroxysteroid Dehydrogenases, Alcohol Dehydrogenase, Amyloid beta-Peptides metabolism, Coenzyme A, Humans, 3-Hydroxyacyl CoA Dehydrogenases metabolism, Alzheimer Disease metabolism
- Abstract
Background: Mitochondrial 17β-hydroxysteroid dehydrogenase type 10 (17β-HSD10) is necessary for brain cognitive function, but its studies were confounded by reports of Aβ-peptide binding alcohol dehydrogenase (ABAD), formerly endoplasmic reticulum-associated Aβ-peptide binding protein (ERAB), for two decades so long as ABAD serves as the alternative term of 17β-HSD10., Objective: To determine whether those ABAD reports are true or false, even if they were published in prestigious journals., Methods: 6xHis-tagged 17β-HSD10 was prepared and characterized by well-established experimental procedures., Results: The N-terminal 6xHis tag did not significantly interfere with the dehydrogenase activities of 17β-HSD10, but the kinetic constants of its 3-hydroxyacyl-CoA dehydrogenase activity are drastically distinct from those of ABAD, and it was not involved in ketone body metabolism as previously reported for ABAD. Furthermore, it was impossible to measure its generalized alcohol dehydrogenase activities underlying the concept of ABAD because the experimental procedures described in ABAD reports violated basic chemical and/or biochemical principles. More incredibly, both authors and journals had not yet agreed to make any corrigenda of ABAD reports., Conclusion: Brain 17β-HSD10 plays a key role in neurosteroid metabolism and further studies in this area may lead to potential treatments of neurodegeneration including AD.
- Published
- 2022
- Full Text
- View/download PDF
34. Development of a Quantitative FMRP Assay for Mouse Tissue Applications.
- Author
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Adayev T, LaFauci G, Xu W, Dobkin C, Kascsak R, Brown WT, and Goodman JH
- Subjects
- Animals, Brain growth & development, Brain metabolism, Dried Blood Spot Testing standards, Female, Fragile X Mental Retardation Protein genetics, Fragile X Syndrome genetics, Immunoassay methods, Immunoassay standards, Male, Mice, Mice, Inbred C57BL, Organ Specificity, Sensitivity and Specificity, Dried Blood Spot Testing methods, Fragile X Mental Retardation Protein metabolism, Fragile X Syndrome metabolism
- Abstract
Fragile X syndrome results from the absence of the FMR1 gene product-Fragile X Mental Retardation Protein (FMRP). Fragile X animal research has lacked a reliable method to quantify FMRP. We report the development of an array of FMRP-specific monoclonal antibodies and their application for quantitative assessment of FMRP (qFMRPm) in mouse tissue. To characterize the assay, we determined the normal variability of FMRP expression in four brain structures of six different mouse strains at seven weeks of age. There was a hierarchy of FMRP expression: neocortex > hippocampus > cerebellum > brainstem. The expression of FMRP was highest and least variable in the neocortex, whereas it was most variable in the hippocampus. Male C57Bl/6J and FVB mice were selected to determine FMRP developmental differences in the brain at 3, 7, 10, and 14 weeks of age. We examined the four structures and found a developmental decline in FMRP expression with age, except for the brainstem where it remained stable. qFMRPm assay of blood had highest values in 3 week old animals and dropped by 2.5-fold with age. Sex differences were not significant. The results establish qFMRPm as a valuable tool due to its ease of methodology, cost effectiveness, and accuracy.
- Published
- 2021
- Full Text
- View/download PDF
35. A Genotype-Phenotype Study of High-Resolution FMR1 Nucleic Acid and Protein Analyses in Fragile X Patients with Neurobehavioral Assessments.
- Author
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Budimirovic DB, Schlageter A, Filipovic-Sadic S, Protic DD, Bram E, Mahone EM, Nicholson K, Culp K, Javanmardi K, Kemppainen J, Hadd A, Sharp K, Adayev T, LaFauci G, Dobkin C, Zhou L, Brown WT, Berry-Kravis E, Kaufmann WE, and Latham GJ
- Abstract
Fragile X syndrome (FXS) is caused by silencing of the FMR1 gene, which encodes a protein with a critical role in synaptic plasticity. The molecular abnormality underlying FMR1 silencing, CGG repeat expansion, is well characterized; however, delineation of the pathway from DNA to RNA to protein using biosamples from well characterized patients with FXS is limited. Since FXS is a common and prototypical genetic disorder associated with intellectual disability (ID) and autism spectrum disorder (ASD), a comprehensive assessment of the FMR1 DNA-RNA-protein pathway and its correlations with the neurobehavioral phenotype is a priority. We applied nine sensitive and quantitative assays evaluating FMR1 DNA, RNA, and FMRP parameters to a reference set of cell lines representing the range of FMR1 expansions. We then used the most informative of these assays on blood and buccal specimens from cohorts of patients with different FMR1 expansions, with emphasis on those with FXS (N = 42 total, N = 31 with FMRP measurements). The group with FMRP data was also evaluated comprehensively in terms of its neurobehavioral profile, which allowed molecular-neurobehavioral correlations. FMR1 CGG repeat expansions, methylation levels, and FMRP levels, in both cell lines and blood samples, were consistent with findings of previous FMR1 genomic and protein studies. They also demonstrated a high level of agreement between blood and buccal specimens. These assays further corroborated previous reports of the relatively high prevalence of methylation mosaicism (slightly over 50% of the samples). Molecular-neurobehavioral correlations confirmed the inverse relationship between overall severity of the FXS phenotype and decrease in FMRP levels (N = 26 males, mean 4.2 ± 3.3 pg FMRP/ng genomic DNA). Other intriguing findings included a significant relationship between the diagnosis of FXS with ASD and two-fold lower levels of FMRP (mean 2.8 ± 1.3 pg FMRP/ng genomic DNA, p = 0.04), in particular observed in younger age- and IQ-adjusted males (mean age 6.9 ± 0.9 years with mean 3.2 ± 1.2 pg FMRP/ng genomic DNA, 57% with severe ASD), compared to FXS without ASD. Those with severe ID had even lower FMRP levels independent of ASD status in the male-only subset. The results underscore the link between FMR1 expansion, gene methylation, and FMRP deficit. The association between FMRP deficiency and overall severity of the neurobehavioral phenotype invites follow up studies in larger patient cohorts. They would be valuable to confirm and potentially extend our initial findings of the relationship between ASD and other neurobehavioral features and the magnitude of FMRP deficit. Molecular profiling of individuals with FXS may have important implications in research and clinical practice.
- Published
- 2020
- Full Text
- View/download PDF
36. Effect of Influenza Vaccination for the Elderly on Hospitalization and Mortality.
- Author
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Anderson ML, Dobkin C, and Gorry D
- Subjects
- Aged, Hospitalization, Humans, Vaccination, Influenza, Human prevention & control
- Published
- 2020
- Full Text
- View/download PDF
37. The Effect of Influenza Vaccination for the Elderly on Hospitalization and Mortality: An Observational Study With a Regression Discontinuity Design.
- Author
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Anderson ML, Dobkin C, and Gorry D
- Subjects
- Aged, Aged, 80 and over, Female, Humans, Influenza, Human epidemiology, Male, Middle Aged, United Kingdom epidemiology, Hospitalization statistics & numerical data, Influenza Vaccines administration & dosage, Influenza, Human mortality, Influenza, Human prevention & control, Mortality trends
- Abstract
Background: Observational studies using traditional research designs suggest that influenza vaccination reduces hospitalizations and mortality among elderly persons. Accordingly, health authorities in some countries prioritize vaccination of this population. Nevertheless, questions remain about this policy's effectiveness given the potential for bias and confounding in observational data., Objective: To determine the effectiveness of the influenza vaccine in reducing hospitalizations and mortality among elderly persons by using an observational research design that reduces the possibility of bias and confounding., Design: A regression discontinuity design was applied to the sharp change in vaccination rate at age 65 years that resulted from an age-based vaccination policy in the United Kingdom. In this design, comparisons were limited to individuals who were near the age-65 threshold and were thus plausibly similar along most dimensions except vaccination rate., Setting: England and Wales., Participants: Adults aged 55 to 75 years residing in the study area during 2000 to 2014., Intervention: Seasonal influenza vaccine., Measurements: Hospitalization and mortality rates by month of age., Results: The data included 170 million episodes of care and 7.6 million deaths. Turning 65 was associated with a statistically and clinically significant increase in rate of seasonal influenza vaccination. However, no evidence indicated that vaccination reduced hospitalizations or mortality among elderly persons. The estimates were precise enough to rule out results from many previous studies., Limitation: The study relied on observational data, and its focus was limited to individuals near age 65 years., Conclusion: Current vaccination strategies prioritizing elderly persons may be less effective than believed at reducing serious morbidity and mortality in this population, which suggests that supplementary strategies may be necessary., Primary Funding Source: National Institute on Aging.
- Published
- 2020
- Full Text
- View/download PDF
38. Expansions and contractions of the FMR1 CGG repeat in 5,508 transmissions of normal, intermediate, and premutation alleles.
- Author
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Nolin SL, Glicksman A, Tortora N, Allen E, Macpherson J, Mila M, Vianna-Morgante AM, Sherman SL, Dobkin C, Latham GJ, and Hadd AG
- Subjects
- Female, Fragile X Syndrome diagnosis, Fragile X Syndrome pathology, Gene Expression, Gene Frequency, Humans, Male, Pedigree, Alleles, Fragile X Mental Retardation Protein genetics, Fragile X Syndrome genetics, Inheritance Patterns, Trinucleotide Repeat Expansion
- Abstract
Instability of the FMR1 repeat, commonly observed in transmissions of premutation alleles (55-200 repeats), is influenced by the size of the repeat, its internal structure and the sex of the transmitting parent. We assessed these three factors in unstable transmissions of 14/3,335 normal (~5 to 44 repeats), 54/293 intermediate (45-54 repeats), and 1561/1,880 premutation alleles. While most unstable transmissions led to expansions, contractions to smaller repeats were observed in all size classes. For normal alleles, instability was more frequent in paternal transmissions and in alleles with long 3' uninterrupted repeat lengths. For premutation alleles, contractions also occurred more often in paternal than maternal transmissions and the frequency of paternal contractions increased linearly with repeat size. All paternal premutation allele contractions were transmitted as premutation alleles, but maternal premutation allele contractions were transmitted as premutation, intermediate, or normal alleles. The eight losses of AGG interruptions in the FMR1 repeat occurred exclusively in contractions of maternal premutation alleles. We propose a refined model of FMR1 repeat progression from normal to premutation size and suggest that most normal alleles without AGG interruptions are derived from contractions of maternal premutation alleles., (© 2019 The Authors. American Journal of Medical Genetics Part A published by Wiley Periodicals, Inc.)
- Published
- 2019
- Full Text
- View/download PDF
39. 17β-Hydroxysteroid dehydrogenases and neurosteroid metabolism in the central nervous system.
- Author
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He XY, Dobkin C, and Yang SY
- Subjects
- 17-Hydroxysteroid Dehydrogenases genetics, Animals, Homeostasis, Humans, Mutation, Missense genetics, 17-Hydroxysteroid Dehydrogenases metabolism, Central Nervous System metabolism, Neurosteroids metabolism
- Abstract
17β-Hydroxysteroid dehydrogenases are indispensable for downstream enzyme steps of the neurosteroidogenesis. Neurosteroids are synthesized de novo in neurons and glia from cholesterol transported into mitochondria, or by conversion from proneurosteroids, e. g. dehydroepiandrosterone (DHEA) and pregnenolone, through the same metabolic pathway as revealed in the de novo neurosteroidogenesis. Hormonal steroids generated from endocrine glands are transported into brain from the circulation to exert neuronal activity via genomic pathway, whereas neurosteroids produced in brain cells without genomic targets identified could bind to cell surface targets, e.g., GABA
A or NMDA receptors and elicit antidepressant, anxiolytic, anticonvulsant and anesthetic effects by regulating neuroexcitability. In a broad sense, neurosteroids include hormonal steroids in brain, and they are irrespective of origin playing important roles in brain development including neuroprotection, neurogenesis and neural plasticity. They are also a critical element in cognitive and memory functions. Mitochondrial 17β-HSD10, encoded by the HSD17B10 gene mapping to Xp11.2, is found in various brain regions, essential for the maintenance of neurosteroid homeostasis. Mutations identified in this gene resulted in two distinct brain diseases, namely HSD10 deficiency and MRXS10, of which clinical presentations and pathogenetic mechanisms are quite different. Since elevated levels of 17β-HSD10 was found in brains of Alzheimer's disease patients and AD mouse model, it may also act as an adverse factor in the AD pathogenesis due to an imbalance of neurosteroid metabolism., (Copyright © 2018. Published by Elsevier B.V.)- Published
- 2019
- Full Text
- View/download PDF
40. Myth and Measurement - The Case of Medical Bankruptcies.
- Author
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Dobkin C, Finkelstein A, Kluender R, and Notowidigdo MJ
- Subjects
- Adult, California, Female, Health Care Costs, Hospitalization statistics & numerical data, Humans, Insurance, Health economics, Male, Medically Uninsured statistics & numerical data, Middle Aged, United States, Bankruptcy statistics & numerical data, Health Expenditures statistics & numerical data, Hospitalization economics
- Published
- 2018
- Full Text
- View/download PDF
41. The Economic Consequences of Hospital Admissions.
- Author
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Dobkin C, Finkelstein A, Kluender R, and Notowidigdo MJ
- Abstract
We use an event study approach to examine the economic consequences of hospital admissions for adults in two datasets: survey data from the Health and Retirement Study, and hospitalization data linked to credit reports. For non-elderly adults with health insurance, hospital admissions increase out-of-pocket medical spending, unpaid medical bills and bankruptcy, and reduce earnings, income, access to credit and consumer borrowing. The earnings decline is substantial compared to the out-of-pocket spending increase, and is minimally insured prior to age-eligibility for Social Security Retirement Income. Relative to the insured non-elderly, the uninsured non-elderly experience much larger increases in unpaid medical bills and bankruptcy rates following a hospital admission. Hospital admissions trigger less than 5 percent of all bankruptcies., Competing Interests: The authors declare that they have no relevant or material financial interests that relate to the research described in this paper.
- Published
- 2018
- Full Text
- View/download PDF
42. The Mechanisms of Alcohol Control.
- Author
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Carpenter CS, Dobkin C, and Warman C
- Abstract
A substantial economics literature documents that tighter alcohol controls reduce alcohol-related harms, but far less is known about mechanisms. We use the universe of Canadian mortality records to document that Canada's Minimum Legal Drinking Age (MLDA) significantly reduces mortality rates of young men but has much smaller effects on women. Using drinking data that are far more detailed than in prior work, we document that the MLDA substantially reduces 'extreme' drinking among men but not women. Our results suggest that alcohol control efforts targeting young adults should focus on reducing extreme drinking behavior.
- Published
- 2016
- Full Text
- View/download PDF
43. Fragile X full mutation expansions are inhibited by one or more AGG interruptions in premutation carriers.
- Author
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Nolin SL, Glicksman A, Ersalesi N, Dobkin C, Brown WT, Cao R, Blatt E, Sah S, Latham GJ, and Hadd AG
- Subjects
- Age Factors, Alleles, Anticipation, Genetic, Family, Female, Fragile X Syndrome diagnosis, Genetic Testing, Genomic Instability, Humans, Male, Mass Screening, Mosaicism, Polymerase Chain Reaction, Fragile X Mental Retardation Protein genetics, Fragile X Syndrome genetics, Heterozygote, Mutation, Trinucleotide Repeat Expansion
- Abstract
Purpose: Fragile X CGG repeat alleles often contain one or more AGG interruptions that influence allele stability and risk of a full mutation transmission from parent to child. We have examined transmissions of maternal and paternal alleles with 45-90 repeats to quantify the effect of AGG interruptions on fragile X repeat instability., Methods: A novel FMR1 polymerase chain reaction assay was used to determine CGG repeat length and AGG interruptions for 1,040 alleles from 705 families., Results: We grouped transmissions into nine categories of five repeats by parental size and found that in every size category, alleles with no AGGs had the greatest risk for instability. For maternal alleles <75 repeats, 89% (24/27) that expanded to a full mutation had no AGGs. Two contractions in maternal transmission were accompanied by loss of AGGs, suggesting a mechanism for generating alleles that lack AGG interruptions. Maternal age was examined as a factor in full mutation expansions using prenatal samples to minimize ascertainment bias, and a possible effect was observed though it was not statistically significant (P = 0.06)., Conclusion: These results strengthen the association of AGG repeats with CGG repeat stability and provide more accurate risk estimates of full mutation expansions for women with 45-90 repeat alleles.
- Published
- 2015
- Full Text
- View/download PDF
44. The Minimum Legal Drinking Age and Crime.
- Author
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Carpenter C and Dobkin C
- Abstract
We use variation from the minimum legal drinking age to estimate the causal effect of access to alcohol on crime. Using a census of arrests in California and a regression discontinuity design, we find that individuals just over age 21 are 5.9% more likely to be arrested than individuals just under 21. This increase is mostly due to assaults, alcohol-related offenses, and nuisance crimes. These results suggest that policies that restrict access to alcohol have the potential to substantially reduce crime.
- Published
- 2015
- Full Text
- View/download PDF
45. A novel cysteine sulfinic Acid decarboxylase knock-out mouse: comparison between newborn and weanling mice.
- Author
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Park E, Park SY, Dobkin C, and Schuller-Levis G
- Subjects
- Animals, Animals, Newborn, Brain metabolism, Carboxy-Lyases metabolism, Liver metabolism, Mice, Mice, Inbred C57BL, Mice, Knockout, Phenotype, Taurine blood, Taurine genetics, Weaning, Carboxy-Lyases genetics, Taurine metabolism
- Published
- 2015
- Full Text
- View/download PDF
46. Identification of fragile X syndrome specific molecular markers in human fibroblasts: a useful model to test the efficacy of therapeutic drugs.
- Author
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Kumari D, Bhattacharya A, Nadel J, Moulton K, Zeak NM, Glicksman A, Dobkin C, Brick DJ, Schwartz PH, Smith CB, Klann E, and Usdin K
- Subjects
- Animals, Case-Control Studies, Cells, Cultured, Drug Evaluation, Preclinical, Fibroblasts cytology, Fibroblasts metabolism, Fragile X Mental Retardation Protein genetics, Fragile X Syndrome drug therapy, Humans, Leucine metabolism, Male, Mice, Mice, Knockout, Phosphatidylinositol 3-Kinases metabolism, Protein Biosynthesis, RNA, Messenger genetics, Ribosomal Protein S6 Kinases metabolism, Biomarkers metabolism, Fragile X Syndrome genetics
- Abstract
Fragile X syndrome (FXS) is the most frequent cause of inherited intellectual disability and autism. It is caused by the absence of the fragile X mental retardation 1 (FMR1) gene product, fragile X mental retardation protein (FMRP), an RNA-binding protein involved in the regulation of translation of a subset of brain mRNAs. In Fmr1 knockout mice, the absence of FMRP results in elevated protein synthesis in the brain as well as increased signaling of many translational regulators. Whether protein synthesis is also dysregulated in FXS patients is not firmly established. Here, we demonstrate that fibroblasts from FXS patients have significantly elevated rates of basal protein synthesis along with increased levels of phosphorylated mechanistic target of rapamycin (p-mTOR), phosphorylated extracellular signal regulated kinase 1/2, and phosphorylated p70 ribosomal S6 kinase 1 (p-S6K1). The treatment with small molecules that inhibit S6K1 and a known FMRP target, phosphoinositide 3-kinase (PI3K) catalytic subunit p110β, lowered the rates of protein synthesis in both control and patient fibroblasts. Our data thus demonstrate that fibroblasts from FXS patients may be a useful in vitro model to test the efficacy and toxicity of potential therapeutics prior to clinical trials, as well as for drug screening and designing personalized treatment approaches., (© 2014 WILEY PERIODICALS, INC.)
- Published
- 2014
- Full Text
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47. Fragile X protein in newborn dried blood spots.
- Author
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Adayev T, LaFauci G, Dobkin C, Caggana M, Wiley V, Field M, Wotton T, Kascsak R, Nolin SL, Glicksman A, Hosmer N, and Brown WT
- Subjects
- Blood Preservation, Female, Fragile X Mental Retardation Protein genetics, Fragile X Syndrome genetics, Humans, Infant, Newborn, Male, Retrospective Studies, Time Factors, Dried Blood Spot Testing methods, Fragile X Mental Retardation Protein blood, Fragile X Syndrome blood
- Abstract
Background: The fragile X syndrome (FXS) results from mutation of the FMR1 gene that prevents expression of its gene product, FMRP. We previously characterized 215 dried blood spots (DBS) representing different FMR1 genotypes and ages with a Luminex-based immunoassay (qFMRP). We found variable FMRP levels in the normal samples and identified affected males by the drastic reduction of FMRP., Methods: Here, to establish the variability of expression of FMRP in a larger random population we quantified FMRP in 2,000 anonymous fresh newborn DBS. We also evaluated the effect of long term storage on qFMRP by retrospectively assaying 74 aged newborn DBS that had been stored for 7-84 months that included normal and full mutation individuals. These analyses were performed on 3 mm DBS disks. To identify the alleles associated with the lowest FMRP levels in the fresh DBS, we analyzed the DNA in the samples that were more than two standard deviations below the mean., Results: Analysis of the fresh newborn DBS revealed a broad distribution of FMRP with a mean approximately 7-fold higher than that we previously reported for fresh DBS in normal adults and no samples whose FMRP level indicated FXS. DNA analysis of the lowest FMRP DBS showed that this was the low extreme of the normal range and included a female carrying a 165 CGG repeat premutation. In the retrospective study of aged newborn DBS, the FMRP mean of the normal samples was less than 30% of the mean of the fresh DBS. Despite the degraded signal from these aged DBS, qFMRP identified the FXS individuals., Conclusions: The assay showed that newborn DBS contain high levels of FMRP that will allow identification of males and potentially females, affected by FXS. The assay is also an effective screening tool for aged DBS stored for up to four years.
- Published
- 2014
- Full Text
- View/download PDF
48. Roles of 17β-hydroxysteroid dehydrogenase type 10 in neurodegenerative disorders.
- Author
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Yang SY, He XY, Isaacs C, Dobkin C, Miller D, and Philipp M
- Subjects
- Animals, Humans, Mice, 17-Hydroxysteroid Dehydrogenases metabolism, Neurodegenerative Diseases enzymology, Neurodegenerative Diseases pathology
- Abstract
17β-Hydroxysteroid dehydrogenase type 10 (17β-HSD10) is encoded by the HSD17B10 gene mapping at Xp11.2. This homotetrameric mitochondrial multifunctional enzyme catalyzes the oxidation of neuroactive steroids and the degradation of isoleucine. This enzyme is capable of binding to other peptides, such as estrogen receptor α, amyloid-β, and tRNA methyltransferase 10C. Missense mutations of the HSD17B10 gene result in 17β-HSD10 deficiency, an infantile neurodegeneration characterized by progressive psychomotor regression and alteration of mitochondria morphology. 17β-HSD10 exhibits only a negligible alcohol dehydrogenase activity, and is not localized in the endoplasmic reticulum or plasma membrane. Its alternate name - Aβ binding alcohol dehydrogenase (ABAD) - is a misnomer predicated on the mistaken belief that this enzyme is an alcohol dehydrogenase. Misconceptions about the localization and function of 17β-HSD10 abound. 17β-HSD10's proven location and function must be accurately identified to properly assess this enzyme's important role in brain metabolism, especially the metabolism of allopregnanolone. The brains of individuals with Alzheimer's disease (AD) and of animals in an AD mouse model exhibit abnormally elevated levels of 17β-HSD10. Abnormal expression, as well as mutations of the HSD17B10 gene leads to impairment of the structure, function, and dynamics of mitochondria. This may underlie the pathogenesis of the synaptic and neuronal deficiency exhibited in 17β-HSD10 related diseases, including 17β-HSD10 deficiency and AD. Restoration of steroid homeostasis could be achieved by the supplementation of neuroactive steroids with a proper dosing and treatment regimen or by the adjustment of 17β-HSD10 activity to protect neurons. The discovery of this enzyme's true function has opened a new therapeutic avenue for treating AD., (Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
49. Development of a novel cysteine sulfinic Acid decarboxylase knockout mouse: dietary taurine reduces neonatal mortality.
- Author
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Park E, Park SY, Dobkin C, and Schuller-Levis G
- Abstract
We engineered a CSAD KO mouse to investigate the physiological roles of taurine. The disruption of the CSAD gene was verified by Southern, Northern, and Western blotting. HPLC indicated an 83% decrease of taurine concentration in the plasma of CSAD(-/-). Although CSAD(-/-) generation (G)1 and G2 survived, offspring from G2 CSAD(-/-) had low brain and liver taurine concentrations and most died within 24 hrs of birth. Taurine concentrations in G3 CSAD(-/-) born from G2 CSAD(-/-) treated with taurine in the drinking water were restored and survival rates of G3 CSAD(-/-) increased from 15% to 92%. The mRNA expression of CDO, ADO, and TauT was not different in CSAD(-/-) compared to WT and CSAD mRNA was not expressed in CSAD(-/-). Expression of Gpx 1 and 3 was increased significantly in CSAD(-/-) and restored to normal levels with taurine supplementation. Lactoferrin and the prolactin receptor were significantly decreased in CSAD(-/-). The prolactin receptor was restored with taurine supplementation. These data indicated that CSAD KO is a good model for studying the effects of taurine deficiency and its treatment with taurine supplementation.
- Published
- 2014
- Full Text
- View/download PDF
50. Transcription start sites and epigenetic analysis of the HSD17B10 proximal promoter.
- Author
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Yang SY, Dobkin C, He XY, and Brown WT
- Subjects
- 3-Hydroxyacyl CoA Dehydrogenases genetics, 5-Methylcytosine chemistry, 5-Methylcytosine metabolism, Base Sequence, Chromosomes, Human, X, CpG Islands, DNA Methylation, Exons, Female, Humans, Male, Molecular Sequence Data, Promoter Regions, Genetic, Transcription Initiation Site, 3-Hydroxyacyl CoA Dehydrogenases metabolism, Epigenesis, Genetic
- Abstract
Background: Hydroxysteroid (17beta) dehydrogenase X (HSD10) is a multifunctional protein encoded by the HSD17B10 gene at Xp11.2. In response to stress or hypoxia-ischemia its levels increase rapidly. Expression of this gene is also elevated significantly in colonic mucosa of the inactive ulcerative colitis patients. However, accurate information about its several transcripts is still lacking, and additional evidence for its escape from X-chromosome inactivation remains to be obtained in order to help settle a debate (He XY, Dobkin C, Yang SY: Does the HSD17B10 gene escape from X-inactivation? Eur J Hum Genet 2011, 19: 123-124)., Results: Two major HSD17B10 transcription start sites were identified by primer extension at -37 and -6 as well as a minor start site at -12 nucleotides from the initiation codon ATG. Epigenetic analysis of the 5'-flanking region of the HSD17B10 gene showed that there was little 5-methylcytosine (< 3%) in a normal male, and that none of CpG dinucleotides in the CpG island approached 50% methylation in females., Conclusion: The actual length of first exon of the HSD17B10 gene was found to be about a quarter larger than that originally reported. Its transcripts result from a slippery transcription complex. The hypomethylation of the CpG island provides additional evidence for the variable escape of the HSD17B10 gene from X-chromosome inactivation which could influence the range of severity of HSD10 deficiency, an inherited error in isoleucine metabolism, in heterozygous females.
- Published
- 2013
- Full Text
- View/download PDF
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