67 results on '"C. C. Holbrook"'
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2. Mapping Late Leaf Spot Resistance in Peanut (Arachis hypogaea) Using QTL-seq Reveals Markers for Marker-Assisted Selection
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Josh Clevenger, Ye Chu, Carolina Chavarro, Stephanie Botton, Albert Culbreath, Thomas G. Isleib, C. C. Holbrook, and Peggy Ozias-Akins
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Arachis ,QTL-seq ,late leaf spot ,polyploidy ,resistance ,Plant culture ,SB1-1110 - Abstract
Late leaf spot (LLS; Cercosporidium personatum) is a major fungal disease of cultivated peanut (Arachis hypogaea). A recombinant inbred line population segregating for quantitative field resistance was used to identify quantitative trait loci (QTL) using QTL-seq. High rates of false positive SNP calls using established methods in this allotetraploid crop obscured significant QTLs. To resolve this problem, robust parental SNPs were first identified using polyploid-specific SNP identification pipelines, leading to discovery of significant QTLs for LLS resistance. These QTLs were confirmed over 4 years of field data. Selection with markers linked to these QTLs resulted in a significant increase in resistance, showing that these markers can be immediately applied in breeding programs. This study demonstrates that QTL-seq can be used to rapidly identify QTLs controlling highly quantitative traits in polyploid crops with complex genomes. Markers identified can then be deployed in breeding programs, increasing the efficiency of selection using molecular tools.Key Message: Field resistance to late leaf spot is a quantitative trait controlled by many QTLs. Using polyploid-specific methods, QTL-seq is faster and more cost effective than QTL mapping.
- Published
- 2018
- Full Text
- View/download PDF
3. Marker-Assisted Selection to Pyramid Nematode Resistance and the High Oleic Trait in Peanut
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Y. Chu, C. L. Wu, C. C. Holbrook, B. L. Tillman, G. Person, and P. Ozias-Akins
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Plant culture ,SB1-1110 ,Genetics ,QH426-470 - Abstract
The dynamic challenges of peanut ( L.) farming demand a quick response from breeders to develop new cultivars, a process that can be aided by the application of molecular markers. With the goal to pyramid nematode resistance and the trait for high oleic:linoleic acid (high O:L) ratio in seeds, nematode-resistant cultivar Tifguard was used as the recurrent female parent and high O:L cultivars Georgia-02C and Florida-07 were used as donor parents for the high O:L trait. ‘Tifguard High O/L’ was generated through three rounds of accelerated backcrossing using BCF progenies selected with molecular markers for these two traits as the pollen donors. Selfed BCF plants yielded marker-homozygous individuals identified as Tifguard High O/L, compressing the hybridization and selection phases of the cultivar development process to less than 3 yr. The accuracy of marker-assisted selection (MAS) was confirmed by phenotyping a subset of F populations from both parental combinations. Once additional molecular markers linked with traits of interest are designed to be compatible with high-throughput screening platforms, MAS will be more widely integrated into peanut breeding programs.
- Published
- 2011
- Full Text
- View/download PDF
4. Anatomical characteristics correlated to peg strength in Arachis
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M. Levinson, C.M. Levinson, Peggy Ozias-Akins, H. T. Stalker, K.M. Marasigan, Ye Chu, and C. C. Holbrook
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Arachis ,Horticulture ,biology ,PEG ratio ,technology, industry, and agriculture ,food and beverages ,macromolecular substances ,biology.organism_classification - Abstract
Wild, diploid Arachis species are a great source of biotic and abiotic stress resistances and tolerances for peanut breeding programs; however, these species also have undesirable characteristics such as small seed size, low yield, and weak peg strength. Peg strength has been shown to have a positive, linear relationship with yield in cultivated peanut. Therefore, the weak peg strength of wild Arachis species could be detrimental to yield and needs to be selected against when introgressing useful alleles from wild species into elite germplasm. To enable breeders to effectively utilize these wild species, we sought to characterize peg strength and anatomical characteristics correlated with peg strength in seven diploid Arachis species, as well as four allotetraploids, six (cultivated peanut lines x allotetraploid) F1 hybrids, and two cultivated peanut breeding lines. For each genotype, five mature pegs were tested for peg strength and cross-sections for three of the five pegs were subsequently taken and analyzed for peg anatomical characteristics including total peg cross-section area, mean bundle cap area, total bundle cap area, bundle cap as a percentage of peg area, bundle cap number, mean distance between bundle caps, total distance between bundle caps, and tannin cell count. Genotype was a significant indicator for peg strength and all the anatomical characterization parameters (P < 0.05). Peg strength was positively and highly correlated with peg area, mean bundle cap area, total bundle cap area, and bundle cap number. Peg strength comparable to that of peanut breeding lines was recovered in the F1 hybrids. Because weak peg strength in the wild species appears to be recessive, strong pegs can likely be easily selected during the process of introgression.
- Published
- 2021
5. Registration of GA‐BatSten1 and GA‐MagSten1, two induced allotetraploids derived from peanut wild relatives with superior resistance to leaf spots, rust, and root‐knot nematode
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C. C. Holbrook, S. C. M. Leal-Bertioli, David J. Bertioli, Carolina Ballén-Taborda, Peggy Ozias-Akins, Dongying Gao, Scott A. Jackson, and Ye Chu
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Horticulture ,Spots ,biology ,Resistance (ecology) ,Genetics ,Root-knot nematode ,biology.organism_classification ,Agronomy and Crop Science ,Rust - Published
- 2021
6. Seed Composition Survey of a Peanut CSSL Population Reveals Introgression Lines with Elevated Oleic/Linoleic Profiles
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D. Fonceka, Peggy Ozias-Akins, D. Gimode, C. C. Holbrook, Lisa L. Dean, and Ye Chu
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0106 biological sciences ,010104 statistics & probability ,education.field_of_study ,Botany ,Population ,food and beverages ,Introgression ,Composition (visual arts) ,0101 mathematics ,Biology ,education ,01 natural sciences ,010606 plant biology & botany - Abstract
The peanut CSSL population represents one of the ways that interspecific hybridization has been used to introduce genetic variation into cultivated peanut. The lines were developed by crossing Fleur 11, a farmer preferred spanish cultivar from West Africa with a synthetic allotetraploid. The latter was developed by crossing A. duranensis to A. ipaensis and tetraploidizing the resultant hybrid. Subsequent selection with genetic markers resulted in a population comprising lines with small chromosome segments from the wild in a cultivated peanut background. The objective of this study was to characterize the protein, total oil, fatty acid and sugar profiles of the population. The results indicated that the values of Fleur 11 for all the traits analyzed were within the normal range expected in peanut. Since the population had a uniform genetic background derived from Fleur 11, the profiles for a majority of the lines were comparable to Fleur 11. However, three lines (CSSL 84, CSSL 100 and CSSL 111) were found to have elevated oleic acid and reduced linoleic and palmitic acid relative to Fleur 11. The oleic to linoleic acid ratios (O/L) for these lines were 118, 104 and 97% greater than that of Fleur 11, respectively. While the increased values are still considered to be within the normal oleic acid range, the effect of introgressions on these lines represent the possibility of discovering new sources of high O/L polymorphisms. Such polymorphisms have the potential for use in further improving peanut oil quality.
- Published
- 2020
7. Resistance to fall armyworm (Lepidoptera: Noctuidae) feeding identified in nascent allotetraploids cross-compatible to cultivated peanut (Arachis hypogaea L.)
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W.P. Williams, Ye Chu, H.T. Stalker, C.M. Levinson, C. C. Holbrook, X. Ni, K.M. Marasigan, and Peggy Ozias-Akins
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0106 biological sciences ,biology ,Resistance (ecology) ,fungi ,food and beverages ,biology.organism_classification ,01 natural sciences ,Arachis hypogaea ,Lepidoptera genitalia ,010602 entomology ,Horticulture ,Noctuidae ,Fall armyworm ,010606 plant biology & botany - Abstract
Fall armyworm (FAW) is an economically devastating, invasive pest in Sub-Saharan Africa and can be a major pest in the Americas. This pest feeds on more than 80 plant species, including peanut, and threatens the food security of millions of people who rely on these crops in Sub-Saharan Africa. An integrated pest management strategy, including resistant crop cultivars, is needed to control FAW, since populations have been reported to develop insecticide resistance. Genetic sources of host resistance to FAW are limited in cultivated peanut; however, strong resistance to FAW was reported previously in peanut wild relatives. In this in vitro study, we tested diploid peanut relatives including A. ipaensis KG37006 (Ipa), A. duranensis 30060 (Dur), A. correntina 9530 (Cor9530), and A. correntina 9548 (Cor9548); allotetraploids including IpaCor95304x, IpaDur4x; F2 hybrids [A. hypogaea 13-1014 x IpaCor95304x]; and cultivated peanut lines A. hypogaea ‘13-1014′ and ‘Georgia Green' for FAW resistance to identify valuable materials in our breeding program. FAW development was measured by survival, larval weight, larval stage duration, pupation, pupal stage duration, moth emergence relative to pupation, and moth sex. All allotetraploids showed promise as donors for FAW resistance. This FAW resistance was derived primarily from A. ipaensis, but A. duranensis was also identified as a source of resistance, though more moderate. A high level of heterogeneity was found in A. correntina 9530, which likely contributed to the variable performance of this species in the bioassay. Producing hybrids and allotetraploids with wild Arachis species does not guarantee that each derived line from these crosses will be resistant, and since these lines are segregating, selection for resistance is still needed.
- Published
- 2020
8. Correction to: Genomic Designing for Biotic Stress Resistant Peanut
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S. K. Bera, Kirti Rani, J. H. Kamdar, M. K. Pandey, H. Desmae, C. C. Holbrook, M. D. Burow, N. Manivannan, R. S. Bhat, Mital D. Jasani, Satarupa S. Bera, Anand M. Badigannavar, G. Sunkad, Graeme C. Wright, P. Janila, and R. K. Varshney
- Published
- 2022
9. Genomic Designing for Biotic Stress Resistant Peanut
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S. K. Bera, Kirti Rani, J. H. Kamdar, M. K. Pandey, H. Desmae, C. C. Holbrook, M. D. Burow, N. Manivannan, R. S. Bhat, Mital D. Jasani, Satarupa S. Bera, Anand M. Badigannavar, G. Sunkad, Graeme C. Wright, P. Janila, and R. K. Varshney
- Published
- 2022
10. Peanut Yield Gains Over the Past Fifty Years
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C. C. Holbrook
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0303 health sciences ,03 medical and health sciences ,Agronomy ,030306 microbiology ,Education society ,Yield (finance) ,Biology ,030304 developmental biology ,Arachis hypogaea - Abstract
To commemorate the 50th anniversary of the American Peanut Research and Education Society (APRES) we examined the changes in average yields of peanut (Arachis hypogaea L.) during that time period. Before APRES, yields had never been greater than 2242 kg/ha (2,000 lb/ac). In 1967 the average yield was 1978 kg/ha (1967 lb/ac). In 2017 the average peanut yield was 4566 kg/ha (4074 lb/ac). Average yield gains for the first 50 years of APRES was 51.8 kg/ha/yr (46.2 lb/ac/yr). APRES played critical roles in facilitating research and extension to achieve these yield advances for the U.S. peanut industry.
- Published
- 2019
11. Nutrient uptake and nutrient use efficiency of cassava genotypes with different starch bulking periods as affected by different planting dates
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Piyada Theerakulpisut, Wanwipa Kaewpradit, Poramate Banterng, Craig K. Kvien, Sanun Jogloy, Banyong Toomsan, Nimitr Vorasoot, Anon Janket, and C. C. Holbrook
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0106 biological sciences ,Physiology ,Starch ,Sowing ,Growing season ,food and beverages ,04 agricultural and veterinary sciences ,Biology ,Seasonality ,medicine.disease ,01 natural sciences ,chemistry.chemical_compound ,Nutrient ,chemistry ,Agronomy ,040103 agronomy & agriculture ,medicine ,0401 agriculture, forestry, and fisheries ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
Information on macronutrient uptake and nutrient use efficiency (NUE) of cassava genotypes under different planting dates is limited. The aims of this study were 1) to investigate the responses of cassava genotypes to planting dates for nutrient uptake and NUE and 2) to identify the superior genotypes based on these traits. Three cassava genotypes (Kasetsart 50 (KU50), Rayong 11 (RY11) and CMR38-125-77) were planted in a randomized complete block design with four replications at four planting dates (20-Apr, 30-Jun, 5-Oct and 15-Dec 2016) and harvested at 12 months after planting (MAP). Planting cassava on 20-Apr and 15-Dec produced the highest total crop nutrient uptake and nutrient uptake for storage roots. Whereas planting cassava on 5-Oct and 15-Dec with higher solar radiation, temperature, relative humidity and longer photoperiod during canopy establishment until high carbohydrates translocation and with lower temperature and shorter photoperiod during a dormancy period resulted in greater NUE for biomass and storage roots and nutrient harvest index for all genotypes and most elements. CMR38-125-77 and KU50 showed good performance in terms of total nutrient uptake across planting dates (1.45–38.31 g plant−1) for most elements. CMR38-125-77 seems to be the best genotype on the basis of high storage root dry weight, high NUE for both biomass (90.1–1,594.6) and storage roots (39.9–927.1) and nutrient harvest index (0.14–0.58) for almost all planting dates, except in planting date 20-Apr in which RY11 was the highest for these traits. The genotype identified is useful as parental source for further breeding programs to improve genotypes with high NUE and high storage root yield.
- Published
- 2020
- Full Text
- View/download PDF
12. Peanut Peg Strength and Associated Pod Yield and Loss by Cultivar
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R. C. Nuti, Charles Chen, C. C. Holbrook, and Ronald B. Sorensen
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0106 biological sciences ,04 agricultural and veterinary sciences ,Biology ,01 natural sciences ,Arachis hypogaea ,Digging ,Point of delivery ,Agronomy ,Yield (wine) ,PEG ratio ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Late season ,Cultivar ,Tifton ,010606 plant biology & botany - Abstract
Peanut (Arachis hypogaea L.) peg strength and associated pod yield and digging loss were documented for nine cultivars and two breeding genotypes across three harvest dates (early, mid, and late season) at two Southwest Georgia locations during 2010 and 2011. Cultivars selected were Georgia Green, Georgia Greener, Georgia-02C, Georgia-06G, Georgia-07W, Georgia-09B, Georgia-10T, Florida-07, Tifguard, and advanced breeding lines EXP27-1516 and TifGP-2. Prior to digging, a minimum of three peanut plants from each plot were selected and excess stems and leaves were removed with scissors leaving individual peanut pegs and pods with about 5-cm of stem. Each peanut pod was placed in a “U” shaped metal bracket attached to an electronic force gauge and the stem was pulled manually until the pod detached. After digging and combining, a tractor-mounted scavenger machine was used to collect pods remaining in the soil. Peg strength was greater at Dawson (6.14 N) compared to Tifton (5.28 N) in 2010 but were similar in 2011 (4.51 and 4.39 N, respectively). Dawson had consistently higher yields (5326 kg/ha) and lower pod loss (562 kg/ha) compared with Tifton (3803 kg/ha and 936 kg/ha, respectively). Peanut cultivars with greater peg strength across locations were Georgia-06G, Florida-07, and Georiga-02C. Cultivar Georiga-06G showed the greatest yield across locations and years. Other cultivars may have had stronger peg strength, greater pod yield, or lower pod loss but none were more consistent than these three cultivars across years, locations, and harvest dates.
- Published
- 2017
13. Expression of the limited-transpiration trait under high vapour pressure deficit in peanut populations: Runner and virginia types
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Thomas G. Isleib, Avat Shekoofa, C. Aninbon, C. C. Holbrook, Ye Chu, Peggy Ozias-Akins, and Thomas R. Sinclair
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0106 biological sciences ,education.field_of_study ,Vapour Pressure Deficit ,Initial screen ,Drought tolerance ,Population ,food and beverages ,04 agricultural and veterinary sciences ,Plant Science ,Biology ,01 natural sciences ,Agronomy ,Shoot ,040103 agronomy & agriculture ,Trait ,0401 agriculture, forestry, and fisheries ,Mating ,education ,Agronomy and Crop Science ,010606 plant biology & botany ,Transpiration - Abstract
Drought can be a critical limitation on peanut yield. A physiological trait that may help to ameliorate drought is limited transpiration (TRlim), defined as a limitation on further increases in transpiration rate (TR) under high vapour pressure deficit (VPD) conditions. The advantage of the TRlim trait is that it allows plant water conservation to increase soil water availability for use during late-season drought. While this trait has been identified in peanut, there is no information of how readily the trait may be transfer to progeny lines. The objective of this study was to obtain preliminary information on the expression of the TRlim trait in two peanut progeny populations. One population was runner type of 88 RILs derived from the mating of Tifrunner × NC 3033. The second set was selected for the virginia-type phenotype of large pods obtained from mating of PI 585005 (ICGV 86015) and N0808olJCT, both of which expressed the TRlim trait. A two-tier screen was applied to both populations. The initial screen was based on exposure of de-rooted shoots to silver ions. Fifteen runner type and 12 virginia type were selected for direct measures of transpiration response to varying VPD. The results from each of the two populations showed that an effective expression of the TRlim trait occurred in about 30% of the progeny in each population. While these results do not offer a definitive index of inheritance, they do indicate that there appears to be a strong possibility of transferring the TRlim trait to progeny genotypes.
- Published
- 2017
14. Conditions that Impact Artificial Hybridization of Arachis hypogaea L
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Ye Chu, C. C. Holbrook, Peggy Ozias-Akins, and C. L. Wu
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0106 biological sciences ,0301 basic medicine ,Pollination ,food and beverages ,Heritability ,Biology ,01 natural sciences ,Arachis hypogaea ,03 medical and health sciences ,030104 developmental biology ,Agronomy ,Genetic marker ,Self-pollination ,Plant breeding ,Cultivar ,010606 plant biology & botany ,Hybrid - Abstract
Modern farming is dependent on continual development of improved cultivars and efficient cultural management practice. In addition, dissecting genetic components of heritable traits also relies on the development of large mapping populations. Artificial hybridization is the critical initial step in these processes. Peanut is a self-pollinating crop with a typical yield of less than three seeds per flower; therefore, significant effort is required to produce sufficient hybrid seeds for subsequent trait selection and/or establishment of mapping populations. A study was conducted to evaluate the effect of multiple factors on the success rate of artificial hybridization assessed by transmission of molecular markers unique to the paternal parent. Multiple peanut genotypes were crossed with a breeding line homozygous for both high oleic acid and nematode resistance. The impacts of operator, pollination time, flower integrity, genotype and environment on hybridization were evaluated. Data indicated that operator, pollination time and environment significantly affected the success rate of peanut hybridization. Pods from runner type parental plants that contain hybrid seeds were more likely to contain single seeds than those derived from self-pollination. Hybrid seed loss due to seed rot and peg damage reduced yield. Improving hybridization success rate by increasing humidity, decreasing temperature, personnel training and greenhouse management is recommended.
- Published
- 2016
15. Identification of Rare Recombinants Leads to Tightly Linked Markers for Nematode Resistance in Peanut
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Patricia Timper, R. Gill, Peggy Ozias-Akins, Ye Chu, Josh Clevenger, and C. C. Holbrook
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0106 biological sciences ,0301 basic medicine ,Genetics ,education.field_of_study ,biology ,Geography, Planning and Development ,Population ,Introgression ,Development ,biology.organism_classification ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Genetic marker ,Meloidogyne arenaria ,Molecular marker ,Chromosomal region ,Ploidy ,education ,Recombination ,010606 plant biology & botany - Abstract
Strong host resistance to root-knot nematode (RKN; Meloidogyne arenaria) introgressed from a wild diploid species to cultivated peanut was previously shown to be located on a large chromosomal region of linkage group A09. Little to no recombination in mapping populations has hindered fine mapping of the resistance genes. In order to further delineate the introgressed region, additional polymorphic markers were added to the linkage group A09 using a recombinant inbred line population developed from Gregory x Tifguard in which Gregory is the susceptible parent and Tifguard is the resistant parent harboring the alien introgression. Map distance within the introgressed region based on this population increased to 8 cM compared with zero recombination in an earlier generation. Lines with rare recombination within this introgressed region were phenotyped and it was demonstrated that one portion of the introgressed region confers moderate resistance while a smaller, distal portion confers strong resistance to RKN. Molecular markers associated with the introgressed region conferring strong resistance can be deployed in peanut breeding programs to improve selection for RKN resistance.
- Published
- 2016
16. Rooting traits of peanut genotypes with different yield responses to terminal drought
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Nuntawoot Jongrungklang, Thawan Kesmala, Nimitr Vorasoot, C. C. Holbrook, R. Koolachart, Aran Patanothai, S. Wongkaew, and Sanun Jogloy
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Stomatal conductance ,Field experiment ,fungi ,Drought tolerance ,food and beverages ,Soil Science ,Root system ,Biology ,Point of delivery ,Agronomy ,Dry weight ,Water-use efficiency ,Agronomy and Crop Science ,Water content - Abstract
Drought at pod filling can severely reduce yield of peanut. Better root systems can reduce yield loss from drought. However, the relationship of root characters with yield under terminal drought is not well understood. The objective of this study was to investigate the responses of peanut genotypes with different yield responses to terminal drought stress for root dry weight and the percent root length density (% RLD) in deeper soil layers and their relationships with biological and economic yield. A field experiment was conducted at Khon Kaen University's Agronomy Farm in 2010/2011 and 2011/2012. A split plot design with four replications was used in this study. Five peanut genotypes: ICGV 98308, ICGV 98324, ICGV 98348, Tainan 9 and Tifton 8 were assigned as subplots and two soil moisture levels [field capacity (FC) and 1/3 available water (1/3 AW) at R7 growth stage through harvest] were assigned as main plots. Data for root dry weight, % root length density (% RLD), stomatal conductance, water use efficiency (WUE), pod yield, biomass, harvest index (HI), were recorded at harvest. Drought significantly reduced pod yield, biomass and HI. Overall genotypes, yield responses to terminal drought were not correlated with root dry weight and % RLD. However for some genotypes, yield under terminal drought did seem to be related to root dry weight and % RLD. The genotypes with large root system and high stomatal conductance, WUE and biomass and maintained higher pod yield under terminal drought. For example, Tifton 8 had high root dry weight and high stomatal conductance, WUE and biomass, maintained higher pod yield under drought conditions. Peanut genotypes that have high % RLD at deeper layers and high stomatal conductance, WUE and HI might also maintain pod yield under terminal drought. ICGV 98324 and ICGV 98348 increased % RLD at deeper layers and also had high stomatal conductance, WUE and HI and maintained higher pod yield under terminal drought. Percent RLD could be useful as a selection criterion for improving resistance to drought. However, selection of RLD alone can be confounded because some genotypes with high RLD under terminal drought had low pod yield, and selection of RLD as a supplement for pod yield under drought would be more effective.
- Published
- 2013
17. Development and Phenotyping of Recombinant Inbred Line (RIL) Populations for Peanut (Arachis hypogaea)
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R. Gill, Steven J. Knapp, Baozhu Guo, Ye Chu, Thomas G. Isleib, Barry L. Tillman, Mark D. Burow, C. C. Holbrook, and Peggy Ozias-Akins
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Agronomy ,law ,business.industry ,Recombinant DNA ,food and beverages ,Marker-assisted selection ,Biology ,business ,law.invention ,Biotechnology ,Arachis hypogaea - Abstract
The identification of molecular markers for economically significant traits should greatly improve the speed and efficiency of all peanut (Arachis hypogaea L.) breeding programs. Development and phenotypic evaluation of recombinant inbred line (RIL) populations of peanut, along with molecular genotyping, will be essential for association of markers with traits. The primary objectives of this research were to develop 16 structured RIL populations that can be used by the peanut research community, and to begin high-resolution phenotyping of these populations. Crosses were made using a 2 by 8 (common by unique) factorial nested association mapping design. Parents were selected to attempt to maximize genetic diversity while meeting practical breeding objectives. First, two modern runner cultivars (Tifrunner and Florida-07) were selected as common parents because runner cultivars account for about 80% of the production in the U.S. Second, the eight unique parents were selected to supply diversity across market classes and botanical varieties and are donors of favorable alleles for enhancing drought tolerance and resistance to most important disease of peanut in the U.S. The eight unique parents are N08082olJCT (a Bailey derived high oleic breeding line), C76-16, NC 3033, SPT 06-06, SSD 6 (PI 576638), OLin, New Mexico Valencia A, and Florunner. The 16 populations were advanced using summer and winter nurseries. Input from multiple disciplines has resulted in a prioritized list of populations and traits that should be examined, and seed increase has begun to provide the community with material for extensive phenotyping. In-depth phenotyping and genotyping of these populations should result in markers that can be deployed by breeding programs for the development of improved cultivars.
- Published
- 2013
18. Contribution of Root-Knot Nematodes to Aflatoxin Contamination in Peanut (Arachis hypogaea)
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David M. Wilson, C. C. Holbrook, and Patricia Timper
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Aflatoxin ,Aspergillus ,Agronomy ,biology ,Nematode infection ,Inoculation ,Meloidogyne arenaria ,medicine ,Preharvest ,Cultivar ,biology.organism_classification ,medicine.disease ,Arachis hypogaea - Abstract
Peanut kernels are susceptible to colonization by some species of Aspergillus which, under conditions of drought and high temperatures, can produce aflatoxins prior to harvest. The objective of this research was to determine the mechanism by which the peanut root-knot nematode (Meloidogyne arenaria) increases aflatoxin contamination in peanut. Research determined 1) the role of nematode infection of roots vs. pods in increased aflatoxin contamination and 2) whether increased aflatoxin production in nematode-infected peanut is due to a greater percentage of small or immature kernels. An additional objective was to determine whether a peanut cultivar with resistance to M. arenaria would reduce the risk of preharvest aflatoxin contamination. In the greenhouse, researchers physically separated root growth from pod set and inoculated each location with M. arenaria or a water control in a 2 × 2 factorial design with 12–15 replications. Of the six trials conducted, data indicated that pod and root infection by M. arenaria was associated with elevated aflatoxin concentrations in one and three trials, respectively. This suggests that root infection by the nematode can increase aflatoxin concentrations in the peanut kernel. Another 2 × 2 factorial experiment was conducted with two peanut genotypes (Tifguard and TifGP-2) and two nematode treatments (with and without M. arenaria) with six replications. The cultivar Tifguard is resistant to M. arenaria and TifGP-2 is susceptible. The experiment was carried out in 24 field microplots equipped with a rainout shelter. The experiment was conducted five times from 2006 to 2010. Infection of TifGP-2 by M. arenaria did not lead to greater percentages of small kernels. In only one year (2007), nematodes appeared to increase the percentage of damaged kernels, though aflatoxin concentrations were not affected by nematodes in that year. In the rainout shelter experiment, 2006 was the only year where nematode infection of peanut increased aflatoxin concentrations. In that year, there were lower aflatoxin concentrations in the nematode-resistant cultivar Tifguard than the susceptible germplasm TifGP-2 (12 vs. 136 ng/g).
- Published
- 2013
19. Effects of Drought on Characters Related to Nitrogen Fixation in Peanut
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S. Pimratch, Thawan Kesmala, Nimitr Vorasoot, C. C. Holbrook, Aran Patanothai, Sanun Jogloy, and Banyong Toomsan
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Field capacity ,Fixation (population genetics) ,Agronomy ,Dry weight ,Soil water ,Nitrogen fixation ,Greenhouse ,Biomass ,Plant Science ,Cultivar ,Biology ,Agronomy and Crop Science - Abstract
Twelve peanut genotypes were tested under three water regimes in two greenhouses to investigate the effects of drought on biomass production and N2 fixation. Drought reduced biomass production from 36.5 to 56.0% and reduced nitrogen fixation from 26.8 to 68.8%. Most genotypes with high biomass production under Field Capacity (FC) had high reduction in biomass production under drought conditions, but fewer genotypes with high N2 fixed under FC showed high reduction in N2 fixed. Biomass production under FC in general gave more contribution to biomass production under drought conditions than did the reduction. N2 fixed under FC and the reduction in N2 fixed contributed similarly to N2 fixed under drought conditions. Positive and significant correlations between N2 fixed and biomass production were found at FC and 2/3 available soil water (AW), but the correlation was not significant at 1/3 AW. Tifton-8 was the best genotype for high N2 fixed under FC and KK 60-3 was the best genotype for low reduction. Correlations between N2 fixed and nodule dry weight and shoot dry weight were high and consistent across water regimes. This information is important for breeders to develop peanut cultivars with reasonably high nitrogen fixation under drought conditions
- Published
- 2010
20. Development and Evaluation of Peanut Germplasm with Resistance to Aspergillus flavus from Core Collection
- Author
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Jiang Huifang, Z Xiao-Ji, Ren Xiaoping, Wang Shengyu, Hari D. Upadhyaya, Liao Bo-shou, Huang Jiaquan, and C C Holbrook
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Germplasm ,Aflatoxin ,Genetic diversity ,biology ,Hypogaea ,food and beverages ,Aspergillus flavus ,Plant Science ,Plant disease resistance ,biology.organism_classification ,Arachis hypogaea ,Horticulture ,Agronomy ,heterocyclic compounds ,Cultivar ,skin and connective tissue diseases ,Agronomy and Crop Science ,Biotechnology - Abstract
Peanut (Arachis hypogaea L.), one of the main oil and cash crops in the world, is easily susceptible to Aspergillus flavus, resulting huge loss in its quality, so Aspergillus flavus infection greatly limits peanut production and industry in China. Therefore, it is imperative to develop new peanut germplasm with resistance to Aspergillus flavus in breeding program. The core collection is well accepted as a useful way to improve the efficiency of crop germplasm evaluation and utilization, which contains a subset of accessions from the entire collection that covers the most of available genetic information. In the present study, a total of 561 accessions of Chinese peanut core collection and 155 accessions of ICRISAT mini core collection were identified. Eight varieties with resistance to Aspergillus flavus invasion and aflatoxin production each were developed, including one (51002-6) with elite agronomic traits. The peanut germplasm with resistance to Aspergillus flavus invasion and aflatoxin production in ICRISAT mini core were more than those in Chinese peanut core collection. In addition, the percentages of accessions with resistance to Aspergillus flavus invasion in var. hypogaea, and accessions resistant to aflatoxin production in var. hirsuta were relatively high in comparison with others. Genetic diversity in the resistant peanut selections was evaluated based on morphological traits and SSR approach. ICG12625 with resistance to aflatoxin production and ICG4750 with resistance to aflatoxin invasion were evaluated by SSR, the genetic distance of them with high-yielding cultivars such as Zhonghua 5, Zhonghua 6 and Zhonghua 12 and Yuanza 9102 was larger. The primers were designed based on the conserved NBS-LRR domains of the disease resistance genes sequence, one RGA (Resistance gene analog) from genomic DNA of six different peanuts with resistance to Aspergillus flavus was obtained through PCR.
- Published
- 2010
21. Associations between physiological traits for drought tolerance and aflatoxin contamination in peanut genotypes under terminal drought
- Author
-
C. C. Holbrook, T. Girdthai, S. Wongkaew, A. Patanothai, C. Akkasaeng, N. Vorasoot, and Sanun Jogloy
- Subjects
Aflatoxin ,Irrigation ,endocrine system diseases ,Specific leaf area ,Physiological condition ,fungi ,Drought tolerance ,food and beverages ,Plant Science ,Biology ,humanities ,chemistry.chemical_compound ,Agronomy ,chemistry ,health services administration ,Chlorophyll ,Genetics ,Preharvest ,Plant breeding ,Agronomy and Crop Science - Abstract
With 1 figure and 4 tables Abstract Terminal drought induces preharvest aflatoxin contamination (PAC) in peanut. Drought resistance traits are promising as indirect selection tools for improving resistance to PAC. The objectives of this study were to determine the effects of terminal drought on PAC and to investigate the associations between surrogate traits for drought tolerance and PAC. Field tests under rainout shelters were conducted in the dry seasons 2004/2005 and 2005/2006. Eleven peanut genotypes were evaluated under irrigated and terminal drought conditions. Data were recorded for physiological traits, total biomass, pod yield, Aspergillus flavus colonization and PAC. ICGV 98305, ICGV 98330, ICGV 98348, ICGV 98353 and Tifton-8 had low aflatoxin contamination in both years. Traits related to drought resistance were associated well with those related to PAC under drought conditions. Specific leaf area, relative water content, chlorophyll density and drought stress ratings are the best traits for use as indirect selection tools for lower PAC. Breeding for drought tolerance using these traits as selection criteria may help to accelerate progress in developing resistance to PAC.
- Published
- 2010
22. Reaction of the Core Collection of Peanut Germplasm to Sclerotinia Blight and Pepper Spot1
- Author
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C. C. Holbrook, H. A. Melouk, K. D. Chamberlin, John P. Damicone, and Damon L. Smith
- Subjects
Sclerotinia minor ,biology ,Agronomy ,fungi ,Pepper ,food and beverages ,Habit (biology) ,Blight ,Cultivar ,Leptosphaerulina crassiasca ,Plant disease resistance ,biology.organism_classification ,Sclerotinia - Abstract
In 2001, entries from the peanut core collection, a subset of the USDA peanut germplasm collection, were planted in non-replicated plots in a field with a history of Sclerotinia blight caused by Sclerotinia minor. Variability existed among entries for reaction to Sclerotinia blight. Of the 744 entries evaluated, 11% had no disease, nearly 30% had
- Published
- 2010
23. Relationship between Root Characteristics of Peanut in Hydroponics and Pot Studies
- Author
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Nimitr Vorasoot, C. Akkasaeng, Aran Patanothai, Thawan Kesmala, C. C. Holbrook, Sanun Jogloy, S. Wongkaew, and T. Girdthai
- Subjects
Dry weight ,Agronomy ,fungi ,Drought tolerance ,Shoot ,Randomized block design ,food and beverages ,Root volume ,Root system ,Biology ,Hydroponics ,Agronomy and Crop Science ,Arachis hypogaea - Abstract
A large root system can be an important character for drought tolerance. Measuring root characteristics in soil medium is tedious, time consuming, and labor intensive. The objective of this study was to determine the association between root characteristics of peanut ( Arachis hypogaea L.) grown in hydroponics and in pot experiments. Twelve peanut genotypes were planted in a randomized complete block design with four replications in a hydroponics study, a small pot, and a large pot experiment. The studies were conducted in two years during 2004–2005. Shoot dry weight, root dry weight, root-to-shoot ratio, root length, root surface, average diameter of roots, and root volume were measured. Tifton-8 and ‘KK 60-3’ had consistently higher values for all root characteristics compared to the other genotypes. Root characteristics of peanut genotypes grown in hydroponics were positively correlated with those of peanut genotypes grown in pot conditions. The results suggested that assessment of root characteristics of peanut in hydroponics for possible drought tolerance could replace the assessment in soil medium conditions.
- Published
- 2010
24. Evaluation of Yield and Reproductive Efficiency in Peanut (Arachis hypogaea L.) under Different Available Soil Water
- Author
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Thawan Kesmala, Sanun Jogloy, Nimitr Vorasoot, C. Akkasaeng, Aran Patanothai, Patcharin Songsri, and C. C. Holbrook
- Subjects
Yield (engineering) ,Agronomy ,Drought resistance ,Crop yield ,media_common.quotation_subject ,Water stress ,Soil water ,Plant Science ,Reproduction ,Biology ,Agronomy and Crop Science ,Arachis hypogaea ,media_common - Published
- 2009
25. Content of Some Nutrients in the Core of the Core of the Peanut Germplasm Collection
- Author
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Lisa L. Dean, Timothy H. Sanders, C. C. Holbrook, and Keith W. Hendrix
- Subjects
Germplasm ,Core (game theory) ,Nutrient ,Folic acid ,business.industry ,Genetic variation ,Genetic variability ,Biology ,business ,Amino acid content ,Biotechnology - Abstract
The usefulness of core collections of germplasm collections has been well established. The U.S. germplasm collection for peanuts was selectively reduced based on morphological characteristics to a mini core or “Core of the Core” collection composed of 112 of the 7432 accessions in the whole collection to make it more efficient for study. Of these samples, 108 were available from one location in the same year and were therefore exposed to one set of environmental conditions wherein genetic variability could also be examined. These samples were analyzed for total and individual amino acid content, fatty acid content, tocopherols, and folic acid content. These data provide a starting point for establishing nutrient composition within these accessions and provide an early indication of currently important characteristics in these lines which might be suited for use in random breeding initiatives.
- Published
- 2009
26. Association of root, specific leaf area and SPAD chlorophyll meter reading to water use efficiency of peanut under different available soil water
- Author
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Thawan Kesmala, Aran Patanothai, Patcharin Songsri, Nimitr Vorasoot, C. C. Holbrook, C. Akkasaeng, and Sanun Jogloy
- Subjects
Irrigation ,Specific leaf area ,Randomized block design ,Soil Science ,Root system ,Biology ,Field capacity ,Agronomy ,Dry weight ,Botany ,Water-use efficiency ,Agronomy and Crop Science ,Water content ,Earth-Surface Processes ,Water Science and Technology - Abstract
Drought is the major abiotic constraint affecting peanut productivity and quality worldwide. There is a pressing need to improve the water use efficiency (WUE) of rain-fed peanut production. Breeding varieties with higher water use efficiency is seen as providing part of the solution. The objectives of this work were to (i) evaluate genetic variation in WUE, harvest index, root dry weight, specific leaf area (SLA) and SPAD chlorophyll meter reading (SCMR) among peanut genotypes in response to different available soil water levels and (ii) assess the relevance of root dry weight, SLA and SCMR to WUE in peanut under receding soil moisture levels. Two greenhouse experiments were conducted in the dry and rainy seasons in 2002/2003. The 11 peanut genotypes (ICGV 98300, ICGV 98303, ICGV 98305, ICGV 98308, ICGV 98324, ICGV 98330, ICGV 98348, ICGV 98353, Tainan 9, KK 60-3 and Tifton-8) and three soil moisture levels [field capacity (FC), 2/3 available soil water (AW) and 1/3 AW] were laid out in a factorial randomized complete block design (RCBD) with six replications. At 37, 67, and 97 day after sowing (DAS), data were recorded for SLA and SCMR. Root dry weight, harvest index (HI) and WUE were recorded at harvest. Drought reduced WUE, root dry weight and HI. Across both seasons, Tifton-8 and ICGV 98300 had high WUE and also had large root systems under drought conditions. ICGV 98324 and Tifton-8 had low SLA and high SCMR under stressed and non-stressed condition. Under drought conditions, ICGV 98324 had high HI and Tifton-8 had low HI. Root dry weight had a greater contribution to WUE under well-watered and mild drought (2/3 AW). Under severe drought (1/3 AW), SLA showed a more important contribution to WUE than the other traits. Traits that were associated to high WUE under drought conditions were different among different peanut genotypes. ICGV 98300 maintained high root dry weight under 2/3 AW and ICGV 98324 maintained low SLA and high SCMR under 1/3 AW. Tifton-8 had both large root systems and low SLA associated with high WUE.
- Published
- 2009
27. Heritability of N2Fixation Traits, and Phenotypic and Genotypic Correlations between N2Fixation Traits with Drought Resistance Traits and Yield in Peanut
- Author
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S. Pimratch, Sanun Jogloy, Nimitr Vorasoot, Banyong Toomsan, Thawan Kesmala, Aran Patanothai, and C. C. Holbrook
- Subjects
Specific leaf area ,biology ,fungi ,food and beverages ,Heritability ,biology.organism_classification ,chemistry.chemical_compound ,Horticulture ,Dry weight ,chemistry ,Agronomy ,Chlorophyll ,Shoot ,Nitrogen fixation ,Rhizobium ,Cultivar ,Agronomy and Crop Science - Abstract
Drought stress reduces growth and yield in peanut (Arachis hypogaea L.) and also reduces nitrogen fixation (NF). Peanut production in drought prone areas should be enhanced by the development of cultivars that can fix more nitrogen (N) under drought conditions. The aims of this study were to estimate heritability for NF and to estimate phenotypic and genotypic correlations among traits related to NF with drought-resistance traits and yield under well-watered and drought conditions. A total of 140 lines in the F 4:7 and F4 :8 generations derived from four crosses, parental lines, and a non-nodulating line as a non-N 2 -fixing reference plant were evaluated in the dry seasons 2005/2006 and 2006/2007. These lines were evaluated in rhizobium inoculated soil without N fertilizer under field capacity (FC) and 2/3 available soil water (AW). Data were recorded for specific leaf area (SLA), SPAD chlorophyll meter reading (SCMR), nodule number (NN), nodule dry weight (NDW), shoot dry weight (SDW), pod dry weight (PDW), total dry weight (TDW), harvest index (HI), and NF. Broad-sense heritability (h 2 b ) and narrow-sense heritability (h 2 n ) estimates for NF under FC and 2/3 AW were in the same ranges (h 2 b = 0.84 to 0.98 and h 2 n = 0.29 to 0.39). Positive relationships between NF under FC and 2/3 AW (r = 0.73, P≤ 0.01) indicated that selection for the lines that fixed high N under well-watered conditions should produce lines that fixed high N under drought conditions. Selection for NF under drought conditions might be more effective in improving yield because of a higher correlation between NF and PDW (r G = 0.43, P ≤ 0.01) under drought conditions than under FC (r G = 0.13). The use of SCMR and SLA as surrogate traits for NF would be less effective than direct selection because of weak correlations between these traits and NF.
- Published
- 2009
28. The interaction betweenMeloidogyne arenariaandCylindrocladium parasiticumin runner peanut
- Author
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Weibo Dong, Albert K. Culbreath, C. C. Holbrook, Timothy B. Brenneman, and Patricia Timper
- Subjects
biology ,Inoculation ,food and beverages ,Plant Science ,Horticulture ,biology.organism_classification ,Nematode ,Agronomy ,Meloidogyne arenaria ,Genetics ,Root rot ,Root-knot nematode ,Gall ,Cylindrocladium ,Cultivar ,Agronomy and Crop Science - Abstract
Cylindrocladium black rot (CBR), caused by Cylindrocladium parasiticum , and root-knot nematode, Meloidogyne arenaria , both infect and cause damage to the roots of peanut. Greenhouse and microplot experiments were conducted with the runner type peanut genotypes C724-19-15, C724-19-25 and Georgia-02C with different levels of resistance to nematode and CBR to better understand the interactions between the two pathogens. In the greenhouse, inoculation of 500‐3000 eggs per plant of M. arenaria did not affect the level of root rot induced by 1·0 to 5·0 microsclerotia of C. parasiticum per g soil. In microplots, the root rot ratings from Georgia-02C and C724-19-25 were higher in plots infested with M. arenaria (0·4‐2·0 eggs per cm 3 soil) and C. parasiticum than in plots with C. parasiticum alone; however, M. arenaria did not increase the root rot ratings on the nematode resistant C724-19-15. This was inconsistent with results in the greenhouse. Gall indices were not affected by C. parasiticum inoculations in the greenhouse or microplots. In both 2006 and 2007, a significant interaction between C. parasiticum inoculum densities and nematode level was observed on plant mortality. CBR inoculum greatly increased mortality on C724-19-25 and Georgia-02C, but not on C724-1915, in the presence of M. arenaria . The mortality increase was more apparent at lower inoculum levels of both pathogens, but on the nematode-susceptible cultivars plant mortality was more with co-inoculations of the two pathogens than from either alone. Simultaneous inoculation with the two pathogens decreased yield of C724-19-25 and Georgia-02C as C. parasiticum inoculum levels increased, but even the largest inoculum of M. arenaria (2·0 eggs per cm 3 soil) did not decrease yield of C724-19-15.
- Published
- 2009
29. Genomics: An Evolving Science in Peanut
- Author
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C. C. Holbrook, Susana R. Milla-Lewis, H. T. Stalker, and A. K. Weissinger
- Subjects
Strategic planning ,Arachis ,biology ,business.industry ,media_common.quotation_subject ,food and beverages ,Genomics ,biology.organism_classification ,Genome ,DNA sequencing ,Biotechnology ,Blueprint ,Identification (biology) ,business ,Function (engineering) ,media_common - Abstract
Genomic spcience offers new research tools to explore the function of genes and their effects on plants and animals. Arachis hypogaea is a polyploid species of relatively recent origin and molecular analyses with technologies available in the 1980s and 1990s resulted in little progress in the cultivated species because of apparent lack of molecular variation. Large numbers of polymorphisms existing in wild Arachis species led to evolutionary and gene introgression studies. High throughput genomic sequencing technologies have greatly expanded the possibilities for investigating gene function, but techniques are sufficiently expensive that most federal funding has been directed toward model species and ‘major’ crops. Peanut has lagged behind many other crops, but the number of researchers working on the species in the U.S. and internationally has greatly increased during recent years. In an effort to bring researchers who work with a number of legume crops together to discuss common goals, a national strategic planning workshop was held in 2001 which led to the U.S. Legume Crops Genomics Initiative. A second workshop was held in 2004 to develop a plan with specific objectives for cross-legume genomics research and to outline milestones for accomplishments. Specifically for peanut, a genomics strategic planning workshop was organized at Atlanta in 2004 by the American Peanut Council. A broad view of genomic science was adopted and goals were set by participants to include (a) improving the utility of genetic tools for peanut genomics research, (b) improving the efficacy of technology for gene manipulation in genomics, (c) developing a framework for assembling the peanut genetic blueprint, (d) improving knowledge of gene identification and regulation, and (e) providing bioinformatic management of peanut biological information. Teams of researchers, including molecular biologists, plant breeders, pathologists, and many other disciplines need to be developed to fully utilize the potential of genomics for peanut improvement.
- Published
- 2009
30. Heritability of Drought Resistance Traits and Correlation of Drought Resistance and Agronomic Traits in Peanut
- Author
-
Thawan Kesmala, C. C. Holbrook, Nimitr Vorasoot, Patcharin Songsri, C. Akkasaeng, Sanun Jogloy, and Aran Patanothai
- Subjects
Correlation ,Biomass (ecology) ,Point of delivery ,Agronomy ,Drought resistance ,Yield (wine) ,Drought tolerance ,Trait ,Heritability ,Biology ,Agronomy and Crop Science - Abstract
Inheritance of traits is important for developing effective breeding schemes for improving desired traits. The aims of this study were to estimate the heritabilities (h 2 ) of drought resistance traits and the genotypic (r G ) and phenotypic (r P ) correlations between drought resistance traits and agronomic traits, and to examine the relationships between drought resistance traits under stressed and nonstressed conditions. The 140 lines in the F 4:7 and F 4:8 generations from four peanut (Arachis hypogaea L.) crosses were tested under fi eld capacity (FC) and twothirds available soil water (2/3 AW) in two fi eld experiments. Data were recorded for specifi c leaf area (SLA), SPAD chlorophyll meter reading (SCMR), and biomass, pod yield, harvest index, number of mature pods per plant, seed per pod, and seed size. The h 2 for biomass, pod yield, DTI (drought tolerance index) (pod yield), DTI (biomass), HI, SLA, and SCMR were high for all tested crosses (0.54–0.98). The r G (−0.61 and −0.66) and r P (−0.61 and −0.66) between SLA and SCMR were strong and negative under 2/3 AW and FC. Under 2/3 AW conditions, SCMR was positively correlated with pod yield and seed size. Compared to SLA, SCMR had higher r G and r P with pod yield, biomass, and other agronomics traits. Signifi cant correlations between FC and 2/3 AW conditions were found for pod yield, biomass, SCMR, and SLA, indicating that these traits could be selected under FC or 2/3 AW conditions. SPAD chlorophyll meter reading, which is easy to measure, is potentially useful as a selection trait for drought resistance because of high h 2 and positive correlation with pod yield and agronomic traits.
- Published
- 2008
31. Evaluation of Resistance to Cylindrocladium Parasiticum of Runner-Type Peanut in The Greenhouse and Field
- Author
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Albert K. Culbreath, Timothy B. Brenneman, Weibo Dong, and C. C. Holbrook
- Subjects
Horticulture ,biology ,Resistance (ecology) ,Agronomy ,Inoculation ,Root rot ,food and beverages ,Greenhouse ,Cylindrocladium ,Cultivar ,biology.organism_classification ,Screening procedures ,Inoculation methods - Abstract
Identification and utilization of peanut cultivars with resistance to Cylindrocladium black rot (CBR) is a desirable approach to manage this disease. The objectives of this study were to improve greenhouse and field screening techniques for resistance to CBR, and to evaluate the reaction of selected runner-type peanut genotypes. Georgia-02C (moderately resistant to CBR) and C-99R (CBR-susceptible) were used in comparing the effectiveness of different inoculation methods in the greenhouse. Disease development was affected by both size and density of microsclerotia in soil. Use of microsclerotia at a size of ≥150 to
- Published
- 2008
32. Response of Reproductive Characters of Drought Resistant Peanut Genotypes to Drought
- Author
-
Aran Patanothai, C. C. Holbrook, Nimitr Vorasoot, C. Akkasaeng, Sanun Jogloy, Patcharin Songsri, and Thawan Kesmala
- Subjects
fungi ,Drought tolerance ,food and beverages ,Plant Science ,Biology ,Field capacity ,Horticulture ,Point of delivery ,Yield (wine) ,Soil water ,Genetic variation ,Agronomy and Crop Science ,Water content ,Tifton - Abstract
The aims of this study were to evaluate genetic variations in yield and reproductive developmental characters among peanut genotypes in response to drought and relate these responses to pod yield under different soil moisture. Eleven peanut genotypes were tested under three soil moisture levels [field capacity (FC), 2/3 available soil water (AW) and 1/3AW] in field experiments. Data were recorded for number of flowers, pegs (RSs), immature pods and mature pods per plant, seed per pod, 100-seed weight and pod yield at harvest. A drought tolerance index (DTI) for pod yield was calculated as the ratio of pod yield under stress treatment to that under well-watered conditions. The differences among water regimes were significant for pod yield, number of RSs, immature pods and mature pods per plant, seed per pod and 100 seed weight and differences among genotypes were significant for all traits. Drought reduced pod yield, number of RSs, pods and mature pods per plant. Early peak of flowering is important for the formation of mature pods under drought conditions. Two different strategies were used in maintaining high pod yield under drought. High yield potential was important for ICGV 98348 and ICGV 98353, whereas low pod yield reduction was important for ICGV 98305, ICGV 98303 and ICGV 98300. Tifton 8 showed the lowest pod yield and poor seed filling. High RSs and well-filled mature pods were the most important traits contributing to high pod yield in drought resistant genotypes.
- Published
- 2008
33. Root Distribution of Drought-Resistant Peanut Genotypes in Response to Drought
- Author
-
Nimitr Vorasoot, Aran Patanothai, Sanun Jogloy, C. C. Holbrook, C. Akkasaeng, and Patcharin Songsri
- Subjects
Field capacity ,Point of delivery ,Agronomy ,Drought tolerance ,Soil water ,Sowing ,Soil horizon ,Plant Science ,Biology ,Agronomy and Crop Science ,Subsoil ,Water content - Abstract
The ability of a plant to modify its root distribution to exploit deeper stored soil water may be an important mechanism to avoid drought. This study aimed at assessing root distributions, variations in root length density (RLD) and percentage of root distribution, and the relevance of root traits for yield of drought-resistant peanut genotypes under different available soil water levels. The experiment was conducted in the dry season during the years 2003/04 and 2004/05. Eleven peanut genotypes (ICGV 98300, ICGV 98303, ICGV 98305, ICGV 98308, ICGV 98324, ICGV 98330, ICGV 98348, ICGV 98353, Tainan 9, KK 60-3 and Tifton-8) and three soil moisture levels [field capacity (FC), 2/3 available soil water (AW) and 1/3 AW] were laid out in a split-plot design with four replications. Roots were sampled by a core sampler at 37, 67 and 97 days after sowing (DAS). Root length was determined by a scanner and the WIN-RHIZO Pro 2004a software. RLD was calculated as the ratio of root length (cm) and soil volume (cm 3 ). Graphical illustration of root distribution was constructed by merging RLD in the first and second soil layers (0-40 cm) as upper roots and pooling RLD at the third, fourth and fifth layers (40-100 cm) as lower roots. Pod yield, biomass and harvest index (HI) were recorded at harvest. A drought tolerance index (DTI) was calculated for each parameter as the ratio of the parameter under stress treatment to that under well-watered conditions. Variations in RLD in 40 to 100 cm layer (RLD 40 to 100 cm ) were found under well-watered conditions, and the peanut genotypes could be readily identified as high, intermediate and low for this trait. Changes in RLD in the 40 to 100 cm soil layer were found at 2/3 AW and were more evident at 1/3 AW. ICGV 98300, ICGV 98303, ICGV 98305, ICGV 98308 and KK 60-3 were classified as drought responsive as they increased RLD in the deeper subsoil level in response to drought. In general, RLD under drought conditions was not related to biomass production. The ability to maintain the percentage of RLD (DTI for %RLD) was related to pod yield, DTI for pod yield and DTI for HI. ICGV 98300, ICGV 98303, ICGV 98305 exhibited high DTI (RLD 40 to 100 cm ) which may explain their high pod yield, DTI (PY) and DTI (HI). Based on these observations we classified them as drought-avoiding genotypes.
- Published
- 2008
34. Relationship between Biomass Production and Nitrogen Fixation under Drought-Stress Conditions in Peanut Genotypes with Different Levels of Drought Resistance
- Author
-
Banyong Toomsan, Nimitr Vorasoot, C. C. Holbrook, Aran Patanothai, S. Pimratch, and Sanun Jogloy
- Subjects
Field capacity ,Fixation (population genetics) ,Drought stress ,Agronomy ,Drought resistance ,High nitrogen ,Soil water ,Nitrogen fixation ,food and beverages ,Biomass ,Plant Science ,Biology ,Agronomy and Crop Science - Abstract
The relationship between biomass production and N 2 fixation under drought-stress conditions in peanut genotypes with different levels of drought resistance is not well understood. The objective of this study was to determine the effect of drought on biomass production and N 2 fixation by evaluating the relative values of these two traits under well watered and water-stress conditions. Twelve peanut genotypes were tested under field conditions in the dry seasons of 2003/2004 and 2004/2005 in north-east Thailand. A split-plot design with four replications was used. Main-plot treatments were three water regimes [field capacity (FC), 2/3 available soil water (AW) and 1/3 AW], and sub-plot treatments were 12 peanut lines. Data were recorded on biomass production and N 2 fixation under well watered and water-stress conditions. Genotypic variations in biomass production and N 2 fixation were found at all water regimes. Biomass production and N 2 fixation decreased with increasing levels of drought stress. Genotypes did not significantly differ in reductions for biomass production, but did differ for reductions in N 2 fixation. High biomass production under both mild and severe drought-stress conditions was due largely to high potential biomass production under well-watered conditions and, to a lesser extent, the ability to maintain high biomass production under drought-stress conditions. High N 2 fixation under drought stress also was due largely to high N 2 fixation under well-watered conditions with significant but lower contributions from the ability to maintain high nitrogen fixation under drought stress. N 2 fixation at FC was not correlated with the reduction in N 2 fixation at 2/3 AW and 1/3 AW. Positive relationships between N 2 fixed and biomass production of the tested peanut genotypes were found at both levels of drought stress, and the relationship was stronger the more severe the drought stress. These results suggested that the ability to maintain high N 2 fixation under drought stress could aid peanut genotypes in maintaining high yield under water-limited conditions.
- Published
- 2008
35. Disease Progress of Early Leaf Spot and Components of Resistance to Cercospora arachidicola and Cercosporidium personatum in Runner-Type Peanut Cultivars
- Author
-
D. W. Gorbet, E. G. Cantonwine, Albert K. Culbreath, and C. C. Holbrook
- Subjects
Horticulture ,biology ,Agronomy ,Resistance (ecology) ,Incidence (epidemiology) ,Cercosporidium personatum ,food and beverages ,Leaf spot ,Cultivar ,Plant disease resistance ,Disease progress ,biology.organism_classification ,Cercospora arachidicola - Abstract
This study assessed components of resistance for three runner-type peanut cultivars to infection by Cercospora arachidicola (Ca) and Cercosporidium personatum (Cp), the causal organisms of early leaf spot and late leaf spot, respectively. Resistance components were compared to disease resistance observed in the field. A field study monitored the progression of leaf spot incidence and severity in peanut cultivars Georgia Green, Georganic, and DP-1. Time of disease onset (TDO) and temporal epidemic rate (rate) were estimated for incidence with the logistic model, and for severity with the linear model. Early leaf spot was the predominant disease in the field. Estimates of TDO were 9 d later for DP-1 than for Georgia Green, based on incidence models, and 6 and 7 d later for Georganic and DP-1 than for Georgia Green, respectively, based on severity models. Incidence progression rate was highest for Georganic in 2002 and Georgia Green in 2003, while severity progression rate was highest for Georgia Gr...
- Published
- 2008
36. Frequency of a Loss-of-Function Mutation in Oleoyl-PC Desaturase (ahFAD2A) in the Mini-Core of the U.S. Peanut Germplasm Collection
- Author
-
Peggy Ozias-Akins, C. C. Holbrook, L. Ramos, and Ye Chu
- Subjects
Germplasm ,Genetics ,biology ,Sequence analysis ,Hypogaea ,Linoleic acid ,Mutant ,food and beverages ,biology.organism_classification ,Arachis hypogaea ,Arachis duranensis ,chemistry.chemical_compound ,chemistry ,Allele ,Agronomy and Crop Science - Abstract
High oleic acid to linoleic acid ratios (high O/L) in tetraploid peanut (Arachis hypogaea L.) are controlled by the activity of oleoyl-PC desaturase, which is encoded by two homeologous genes (ahFAD2A and ahFAD2B). In a naturally occurring high O/L peanut, a spontaneous mutation (G-to-A at position 448 resulting in a D150N amino acid substitution) has been found in ahFAD2A, which resulted in a dysfunctional desaturase. In normal × high O/L crosses, segregation ratios for high:normal O/L are either 1:3 or 1:15 suggesting that one gene in some normal O/L lines may be mutated. We designed a cleaved amplifi ed polymorphic sequence (CAPS) marker to differentiate the mutant and wild-type ahFAD2A alleles at the critical point mutation. The mutant allele was present in 31.6% of the accessions from the mini-core collection of peanut germplasm and was confi rmed by DNA sequence analysis. The mutant allele was frequent among subspecies hypogaea accessions but absent from subspecies fastigiata accessions and the putative diploid, A-genome progenitor of peanut, Arachis duranensis. These data will be useful to breeders who would like to transfer disease resistance traits from mini-core accessions to high oleic acid cultivars.
- Published
- 2007
37. Identification and characterization of phospholipase D and its association with drought susceptibilities in peanut (Arachis hypogaea)
- Author
-
R. E. Lynch, C. C. Holbrook, B. Z. Guo, G. Xu, and Y. G. Cao
- Subjects
Germplasm ,Arachis ,Genotype ,Molecular Sequence Data ,Drought tolerance ,Plant Science ,Complementary DNA ,Gene expression ,Botany ,Phospholipase D ,Genetics ,Amino Acid Sequence ,Gene ,Conserved Sequence ,Phylogeny ,Plant Proteins ,Aspergillus ,Base Sequence ,biology ,fungi ,Water ,food and beverages ,Fungi imperfecti ,biology.organism_classification ,Arachis hypogaea ,Horticulture ,lipids (amino acids, peptides, and proteins) - Abstract
Preharvest aflatoxin contamination has been identified by the peanut industry as a serious issue in food safety and human health because of the carcinogenic toxicity. Drought stress is the most important environmental factor exacerbating Aspergillus infection and aflatoxin contamination in peanut. The development of drought-tolerant peanut cultivars could reduce aflatoxin contamination and would represent a major advance in the peanut industry. In this study, we identified a novel PLD gene in peanut (Arachis hypogaea), encoding a putative phospholipase D (PLD, EC 3.1.4.4). The completed cDNA sequence was obtained by using the consensus-degenerated hybrid oligonucleotide primer strategy. The deduced amino acid sequence shows high identity with known PLDs, and has similar conserved domains. The PLD gene expression under drought stress has been studied using four peanut lines: Tifton 8 and A13 (both drought tolerant) and Georgia Green (moderate) and PI 196754 (drought sensitive). Northern analysis showed that PLD gene expression was induced faster by drought stress in the drought-sensitive lines than the drought tolerance lines. Southern analysis showed that cultivated peanut has multiple copies (3 to 5 copies) of the PLD gene. These results suggest that peanut PLD may be involved in drought sensitivity and tolerance responses. Peanut PLD gene expression may be useful as a tool in germplasm screening for drought tolerance.
- Published
- 2005
38. β-1,3-Glucanase Activity in Peanut Seed (Arachis hypogaea) is Induced by Inoculation with Aspergillus flavus and Copurifies with a Conglutin-Like Protein
- Author
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C. C. Holbrook, Baozhu Guo, X. Q. Liang, and R. E. Lynch
- Subjects
chemistry.chemical_classification ,Aflatoxin ,biology ,Inoculation ,food and beverages ,Aspergillus flavus ,Plant Science ,Fungi imperfecti ,Glucanase ,biology.organism_classification ,Arachis hypogaea ,Microbiology ,chemistry ,Botany ,Storage protein ,Agronomy and Crop Science ,Pathogenesis-related protein - Abstract
Liang, X. Q., Holbrook, C. C., Lynch, R. E., and Guo, B. Z. 2005. β-1,3Glucanase activity in peanut seed (Arachis hypogaea) is induced by inoculation with Aspergillus flavus and copurifies with a conglutin-like protein. Phytopathology 95:506-511. Infection of peanut (Arachis hypogaea) seed by Aspergillus flavus and A. parasiticus is a serious problem that can result in aflatoxin contamination in the seed. Breeding resistant cultivars would be an effective approach to reduce aflatoxin accumulation. The objective of this study was to investigate the expression of the pathogenesis-related (PR) protein β-1,3-glucanase and the isoform patterns in peanut seed inoculated with A. flavus. Peanut genotypes GT-YY9 and GT-YY20 (both resistant to A. flavus infection) and Georgia Green and A100 (both susceptible to A. flavus infection) were used in this study. The activities of β-1,3-glucanase were similar in the uninfected seed of all genotypes, but increased significantly in the resistant genotypes after inoculation in comparison with the susceptible genotypes. An in-gel (native polyacrylamide gel electrophoresis [PAGE]) enzymatic activity assay of β-1,3-glucanase revealed that there were more protein bands corresponding to β-1,3-glucanase isoforms in the infected seed of resistant genotypes than in the infected seed of susceptible genotypes. Both acidic and basic β-1,3-glucanase isoforms were detected in the isoelectric focusing gels. Thin-layer chromatography analysis of the hydrolytic products from the reaction mixtures of the substrate with the total protein extract or individual band of native PAGE revealed the presence of enzymatic hydrolytic oligomer products. The individual bands corresponding to the bands of β-1,3-glucanase isoforms Glu 1 to 5 were separated on the sodium dodecyl sulfate-PAGE, resulting in two bands of 10 and 13 kDa, respectively. The sequences of fragments of the 13-kDa major protein band showed a high degree of homology to conglutin, a storage protein in peanut seed. Conglutin is reported as a peanut allergen, Ara h2. Our data provide the first evidences for peanut having β-1,3-glucanase activities and the association with the resistance to A. flavus colonization in peanut seed. We have not directly demonstrated that conglutin has β-1,3-glucanase activity.
- Published
- 2005
39. High Levels of Field Resistance to Tomato spotted wilt virus in Peanut Breeding Lines Derived from hypogaea and hirsuta Botanical Varieties
- Author
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N. Martinez-Ochoa, James W. Todd, Albert K. Culbreath, Barry L. Tillman, C. C. Holbrook, D. W. Gorbet, and Thomas G. Isleib
- Subjects
Point of delivery ,biology ,Agronomy ,Resistance (ecology) ,Hypogaea ,Cultivar ,Field tests ,biology.organism_classification ,Tomato spotted wilt virus ,Tifton ,Arachis hypogaea - Abstract
Tomato spotted wilt, caused by Tomato spotted wilt tospovirus (TSWV) is a major problem in peanut (Arachis hypogaea L.) producing areas of the southeastern U.S. The integrated program used to manage spotted wilt relies heavily on cultivars with field resistance to TSWV, and finding new sources and greater levels of resistance to TSWV is highly desirable. Field tests were conducted in 2003 and 2004 in Marianna, FL and Tifton, GA to compare three peanut breeding lines, F NC94022-1-2-1-1-b3-B, C 11-2-39, and C 11-186 to that of standard moderately resistant cultivar Georgia Green for field response to TSWV. F NC94022-1-2-1-1-b3-B was of particular interest because it was developed from a cross between lines of A. hypogaea subsp. hypogaea var. hirsuta Kohler and A. hypogaea subsp. hypogaea var. hypogaea. In all tests, final spotted wilt ratings for breeding lines F NC94022-1-2-1-1-b3-B, C 11-2-39, and C 11-186 were lower and pod yields were higher than for Georgia Green. In three tests, final spotted wilt intensity ratings did not differ among F NC94022-1-2-1-1-b3-B, C 11-2-39, and C 11-186. At Marianna in 2004, spotted wilt intensity ratings were lower and pod yields were higher in F NC94022-1-2-1-1-b3-B than in any other entry. The high level of field resistance to TSWV in F NC94022-1-2-1-1-b3-B is presumably derived from its hirsuta type parent, PI 576638.
- Published
- 2005
40. Phenotypic and Molecular Evaluation of Interspecific Peanut (Arachis) Lines
- Author
-
H. T. Stalker, C. C. Holbrook, G. Kochert, and W. F. Anderson
- Subjects
Arachis ,biology ,Botany ,food and beverages ,Leaf spot ,Introgression ,Amplified fragment length polymorphism ,Cylindrocladium ,Interspecific competition ,Plant disease resistance ,Ploidy ,biology.organism_classification - Abstract
Peanut breeders are constantly in search of new sources of genes that confer tolerance or resistance to biotic and abiotic stresses to improve the production and quality. The objective of this study was to evaluate peanut lines generated from interspecific crosses for amounts of wild species introgression, including genes for resistance to peanut root-knot nematodes, tomato spotted wilt virus and leaf spot diseases. Nine diploid Arachis species were crossed with peanut breeding lines and 130 different interspecific hybrid lines were developed. These lines were evaluated for the amount of introgression using RFLP analyses, plant morphology, and disease resistant phenotypes. Based on RFLPs, 41 lines showed measurable introgression and 12 hexaploid-derived lines were polymorphic for at least four probes. Greenhouse and field evaluations indicated that resistance was not present in the lines tested for tomato spotted wilt virus, early leaf spot, or Cylindrocladium black rot. However, resistance approaching that of the wild species was found for the peanut root-knot nematode (Meloidogyne arenaria) among lines derived from crosses with Arachis diogoi, A. correntina, A. batizocoi, and A. cardenasii. Introgression lines were resistant (disease ratings of 1.5 to 4.5 and lesion numbers 8 to 63) compared to Southern Runner (ratings of 5.5 to 6 and lesion numbers of nearly 500) for late leaf spot (Cercosporidium personation) in field evaluations performed in Gainesville, FL over 2 yr. The greatest resistance was found among lines from crosses with A. batizocoi, A. duranensis, A. stenosperma, A. magma, and A. diogoi. Results indicate that it should be possible to identify molecular markers to tag resistance genes for use in conventional breeding programs and stack these genes in highly productive peanut cultivars.
- Published
- 2004
41. Application of Differential Display RT‐PCR and EST/Microarray Technologies to the Analysis of Gene Expression in Response to Drought Stress and Elimination of Aflatoxin Contamination in Corn and Peanut
- Author
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C. C. Holbrook, Jiujiang Yu, R. D. Lee, Baozhu Guo, and R. E. Lynch
- Subjects
Host resistance ,Drought stress ,Differential display ,Microarray ,business.industry ,Health, Toxicology and Mutagenesis ,technology, industry, and agriculture ,food and beverages ,Aspergillus flavus ,Biology ,Toxicology ,biology.organism_classification ,biological factors ,Biotechnology ,Real-time polymerase chain reaction ,Aflatoxin contamination ,Gene expression ,heterocyclic compounds ,skin and connective tissue diseases ,business - Abstract
Aflatoxin contamination in the field is known to be influenced by numerous factors. Drought and high temperatures are conducive to Aspergillus flavus infection and aflatoxin contamination. This article will review the application of new molecular tools to study host resistance to
- Published
- 2003
42. Status of the Arachis Germplasm Collection in the United States
- Author
-
C. C. Holbrook
- Subjects
Crop ,Germplasm ,Arachis ,biology ,Agronomy ,business.industry ,Hypogaea ,Plant disease resistance ,biology.organism_classification ,business ,Biotechnology - Abstract
An extensive working collection of Arachis germplasm is maintained by the USDA at the Southern Regional Plant Introduction Sta. in Griffin, GA. Much of this collection is maintained also under long-term seed storage at the Nat. Seed Storage Lab. in Ft. Collins, CO. The working collection consists of 9027 accessions of A. hypogaea and 684 accessions of Arachis species. About half of the A. hypogaea accessions are unimproved landraces collected in the crop's centers of diversity in South America. The other half is comprised of germplasm obtained from countries outside of South America. The U.S. germplasm collection of peanut was the first major germplasm collection to have a working core collection. Research has verified that this core collection can be used to improve the efficiency of germplasm utilization. This has stimulated a great amount of germplasm evaluation work and has resulted in the identification of numerous sources of resistance to several economically significant pathogens. Considerable efforts in the U.S. also have been devoted to the use of wild species of Arachis for sources of resistance to pathogens. Programs are ongoing to introgress high levels of resistance or immunity to early (Cercospora arachidicola Hori) and late (Cercosporidium personatum Berk. & M.A. Curtis) leaf spots, nematodes, and viruses. Genetic resources have been particularly useful in adding disease resistance to peanut cultivars. This has had a significant economic impact on U.S. peanut farmers. The largest impacts have been from the development of cultivars with resistance to Sclerotinia blight (Sclerotinia minor Jagger), the peanut root-knot nematode [Meloidogyne arenaria (Neal) Chitwood race 1], and tomato spotted wilt Tospovirus. Use of these resistant cultivars has an estimated economic impact of more that $200 million annually for U.S. peanut producers.
- Published
- 2001
43. Use of Plant Introductions in Peanut Cultivar Development
- Author
-
Thomas G. Isleib, D. W. Gorbet, and C. C. Holbrook
- Subjects
Agronomy ,Genetic resources ,Genetic vulnerability ,Cultivar ,Biology ,Plant disease resistance ,Arachis hypogaea - Abstract
The genetic base of peanut (Arachis hypogaea L.) in the U.S.A. has at times been extremely narrow, particularly in specific production areas where a single cultivar may be grown in near-monoculture. Because peanut is not a native North American species, all U.S. cultivars necessarily trace their ancestry to plant introductions (PIs), but most of the genetic base of current cultivars rests on selections from farmer-stock peanuts of obscure origin. The objectives of this study were to (a) summarize and document the use of introduced genetic resources in cultivar development and (b) estimate the resulting economic impact. Different PIs were used as parents in early breeding programs. B.B. Higgins used Gambian line Basse as a parent of the GA 207 cross that gave rise to selections used in Georgia, Florida, and North Carolina as the basis for further improvement. PI 121067 was one of seven parents used by W.C. Gregory to initiate the program in North Carolina. A different set of PIs including PI 121070, PI 161317, PI 168661, and A. monticola Krapov. & Rigoni were used in the Texas and Oklahoma programs. Recycling of lines as parents and exchange of germplasm among breeding programs proliferated these PIs in the pedigrees of cultivars released since 1960. Over the past 20 yr, there have been concerted efforts to incorporate additional germplasm into U.S. breeding populations, usually with the purpose of improving resistance to diseases or pests, but also with the objective of broadening the genetic base. These efforts have had a significant economic impact on U.S. peanut farmers, the largest from the development of cultivars with resistance to Sclerotinia blight (Sclerotinia minor Jagger), root-knot nematodes (Meloidogyne spp.), and tomato spotted wilt virus. Use of these resistant cultivars has an economic impact of more than $200 million annually for U.S. peanut producers. In the runner and virginia market types, the average PI ancestry of all cultivars was 17.9%. There are several examples of successful cultivars with up to 25% ancestry from a single PI, including Georgia Green and NC-V11. In the spanish market type, most successful cultivars have derived 50% or more of their ancestry from PIs. Several recent or impending releases incorporate PI germplasm but have not yet been proven in the U.S. seed market.
- Published
- 2001
44. Geographical Distribution of Genetic Diversity in Arachis hypogaea
- Author
-
Thomas G. Isleib and C. C. Holbrook
- Subjects
Germplasm ,biology ,Agronomy ,Meloidogyne arenaria ,Leaf spot ,Cylindrocladium ,Cultivar ,Plant disease resistance ,biology.organism_classification ,Cercospora arachidicola ,Arachis hypogaea - Abstract
The U.S. maintains a large (> 8000 accessions) and genetically diverse collection of peanut (Arachis hypogaea L.) germplasm. It is costly to screen all accessions within this collection for traits that could be useful in cultivar development. The objective of this research was to identify countries of origin that are rich sources of resistance to important peanut diseases. This would allow peanut breeders to focus their efforts on smaller subsets of the germplasm collection. Accessions in the peanut core collection were evaluated for resistance to late (Cercosporidium personatum Berk. & M. A. Curtis) and early (Cercospora arachidicola Hori) leaf spot, tomato spotted wilt Tospovirus (TSWV), the peanut root-knot nematode [Meloidogyne arenaria (Neal) Chitwood race 1], and Cylindrocladium black rot (CBR)[Cylindrocladium crotalarie (Loos) Bell & Sobers]. These data then were examined to determine if genes for resistance clustered geographically. Several geographical areas that appear to be rich sources for disease-resistant genes were identified. China had a relatively large number of accessions with resistance to the peanut root-knot nematode. Peru appeared to be a rich source of material with resistance to CBR. Resistance to late leaf spot was more frequent than expected in accessions from Bolivia and Ecuador. Bolivia was also a valuable source of resistance to early leaf spot. Early leaf spot resistance also was more prevalent than expected in accessions from India, Nigeria, and Sudan. India, Israel, and Sudan were valuable origins for material with resistance to TSWV. Accessions with multiple disease resistance were most common in India, Mozambique, and Senegal. This information should enable plant breeders to utilize more efficiently the genes for disease resistance that are available in the U.S. germplasm collection.
- Published
- 2001
45. Expression of Nematode Resistance in Plant Introductions of Arachis hypogaea
- Author
-
H. Q. Xue, P. Timper, and C. C. Holbrook
- Subjects
Horticulture ,Nematode ,Agronomy ,biology ,Inoculation ,Meloidogyne arenaria ,food and beverages ,Root-knot nematode ,PEST analysis ,Cultivar ,biology.organism_classification ,Fecundity ,Arachis hypogaea - Abstract
The peanut root-knot nematode (Meloidogyne arenaria, race 1) is a world-wide pest of peanut (Arachis hypogaea L.). Several moderately resistant genotypes have been identified in the cultivated peanut species. Our objective was to determine the expression of resistance for six of these genotypes. We examined four potential expressions of resistance—(a) fewer second-stage juveniles (J2) penetrate the roots, (b) fewer J2 establish functional feeding sites, (c) slower maturation, and (d) reduced fecundity (eggs per female). Seedlings of the susceptible cultivar Florunner and the resistant genotypes were inoculated with J2 of M. arenaria, and transplanted 3 d later to synchronize nematode development. Penetration was assessed at 3 and 10 d; development at 10 (or 12), 17, 22, and 27 d; and fecundity at 60 d after inoculation. The experiments were conducted in a greenhouse or growth chamber. The number of J2 within the roots was similar in resistant and susceptible peanut after 3 d; however, numbers were lower in two of the resistant genotypes than in Florunner after 10 d. A greater percentage of J2 failed to develop in all of the resistant genotypes (72 to 79%) than in Florunner (50%) after 17 d. Of the J2 that did begin to develop, the rate of maturation and fecundity was similar in resistant and susceptible genotypes. A lack of development indicates that the J2 failed to establish a feeding site. Therefore, the primary expression of resistance in the six peanut genotypes appears to be a reduction in the percentage of J2 that establish a functional feeding site. The decline in J2 after infection may be related to the failure to establish a feeding site.
- Published
- 2000
46. Level and Geographical Distribution of Resistance to Meloidogyne arenaria in the U.S. Peanut Germplasm Collection
- Author
-
A. W. Johnson, Michael G. Stephenson, and C. C. Holbrook
- Subjects
Germplasm ,biology ,food and beverages ,Root system ,biology.organism_classification ,Arachis hypogaea ,Horticulture ,Agronomy ,Meloidogyne arenaria ,Cultivar ,PEST analysis ,Agronomy and Crop Science ,Eggs per gram ,Gram - Abstract
The peanut root-knot nematode [Meloidogyne arenaria (Neal) Chitwood race 1] causes significant economic losses in many peanut (Arachis hypogaea L.) production areas of the world. The objectives of this study were (i) to examine the peanut core collection to identify sources of resistance, (ii) to estimate the level of resistance that occurs in the U.S. germplasm collection, and (iii) to examine the geographical distribution for resistance in peanut germplasm. Seven hundred forty-one accessions from the core collection were tested in greenhouse trials. The egg-mass rating for cultivar Florunner, the susceptible check, was 4.0 on a 1.0 to 5.0 scale with a nematode reproduction rate of 15 496 eggs per gram of fresh root weight. Fifty-six accessions exhibited an egg-mass rating of ≤2.5. Thirty-six core accessions showed a reduction in root galling, egg-mass rating, egg count per root system, and egg count per gram of root in comparison to Florunner. Twenty-one accessions showed a 70% reduction in egg count per root system and per gram of root, and two accessions showed a 90% reduction of these variables in comparison with Florunner. The 56 resistant indicators from screening the core collection identified 39 clusters in the entire germplasm collection that should be examined more thoroughly. China and Japan appear to be valuable geographical sources for resistance to this nematode.
- Published
- 2000
47. Response of Early, Medium, and Late Maturing Peanut Breeding Lines to Field Epidemics of Tomato Spotted Wilt
- Author
-
C. C. Holbrook, J. A. Baldwin, D. W. Gorbet, F. M. Shokes, H. R. Pappu, S. L. Brown, Albert K. Culbreath, and James W. Todd
- Subjects
Field plot ,Agronomy ,Thrips ,biology ,Tomato spotted wilt tospovirus ,food and beverages ,Cultivar ,biology.organism_classification ,Arachis hypogaea - Abstract
Epidemics of tomato spotted wilt, caused by tomato spotted wilt Tospovirus (TSWV), were monitored in field plots of runner-type peanut (Arachis hypogaea L.) cultivars Georgia Green and Georgia Runner and numerous breeding lines from four different breeding programs as part of efforts toward characterizing breeding lines with potential for release as cultivars. Breeding lines were divided into early, medium and late maturity groups. The tests were conducted near Attapulgus, GA and Marianna, FL in 1997 and in Tifton, GA and Marianna, FL in 1998. Epidemics in some early and medium maturing breeding lines, including some genotypes with high oleic acid oil chemistry, were comparable to those in Georgia Green, the cultivar most frequently used in the southeastern U.S. for suppression of spotted wilt epidemics. No early maturing breeding lines had lower spotted wilt final intensity ratings or higher yields than Georgia Green. However, spotted wilt intensity ratings in some late maturing lines and a smaller number of medium maturing lines were significantly lower than those of Georgia Green. Several of those lines also produced greater pod yields than Georgia Green. Results from these experiments indicated that there is potential for improving management of spotted wilt though development of cultivars that suppress spotted wilt epidemics more than currently available cultivars. There was no indication that differences in spotted wilt ratings corresponded to differences in numbers of thrips adults or larvae.
- Published
- 1999
48. Development of greenhouse screening for resistance to Aspergillus parasiticus infection and preharvest aflatoxin contamination in peanut
- Author
-
David M. Wilson, C. C. Holbrook, and W. F. Anderson
- Subjects
Aflatoxin ,Arachis ,Genotype ,Veterinary (miscellaneous) ,Aspergillus flavus ,Applied Microbiology and Biotechnology ,Microbiology ,chemistry.chemical_compound ,Aflatoxins ,Cultivar ,Mycotoxin ,Crosses, Genetic ,Plant Diseases ,biology ,business.industry ,Inoculation ,food and beverages ,Fungi imperfecti ,biology.organism_classification ,Aspergillus parasiticus ,Biotechnology ,Horticulture ,Aspergillus ,chemistry ,Preharvest ,business ,Agronomy and Crop Science - Abstract
Aspergillus flavus Link ex Fries and A. parasiticus Speare can invade peanut kernels and under certain environmental conditions produce unacceptable levels of the mycotoxin aflatoxin. A concerted effort is underway to reduce aflatoxin contamination in peanut and peanut products. A potentially effective method of control in peanut is the discovery and use of genes for resistance to either fungal invasion or aflatoxin formation. The objective of the present experimental study was to develop an effective and efficient procedure for screening individual plants or pods of single plants for resistance to invasion by the aflatoxigenic fungi and subsequent aflatoxin production. Methods of obtaining adequate drought-stress and fungal infection were developed through this series of experiments. By completely isolating the pods from the root zone and imposing drought-stress only on pegs and pods, high levels of fungal infection were observed. High amounts of preharvest aflatoxin accumulation were also produced by completely isolating the pods from the root zone. Mid-bloom inoculation with A. parasiticus-contaminated cracked corn and drought-stress periods of 40 to 60 days were the most effective procedures. This technique was used to assess peanut genotypes previously identified as being partially resistant to A. parasiticus infection or aflatoxin contamination, and segregating populations from four crosses. Variability in aflatoxin contamination was found among the 11 genotypes evaluated, however, none were significantly lower than the standard cultivars. Broad-sense heritability of four crosses was estimated through evaluation of seed from individual plants in the F2 generation. The heritability estimates of crosses GFA-2 x NC-V11 and Tifton-8 X NC-V11 were 0.46 and 0.29, respectively, but mean aflatoxin contamination levels were high (73,295 and 27,305 ppb). This greenhouse screening method could be an effective tool when genes for superior aflatoxin resistance are identified.
- Published
- 1996
49. Evaluation of Field Inoculation Techniques for Screening Peanut Genotypes for Reaction to Preharvest A. flavus Group Infection and Aflatoxin Contamination1
- Author
-
David M. Wilson, M. E. Will, and C. C. Holbrook
- Subjects
Aflatoxin ,Inoculation ,fungi ,food and beverages ,Aspergillus flavus ,Fungus ,Biology ,Contamination ,biology.organism_classification ,Aspergillus parasiticus ,Arachis hypogaea ,Horticulture ,Botany ,heterocyclic compounds ,Preharvest - Abstract
Efforts are being made to screen peanut (Arachis hypogaea L.) genotypes for resistance to invasion of seed by the Aspergillus flavus (Link ex Fries) group fungi and subsequent contamination by aflatoxins. Field inoculation studies are needed to develop reliable screening techniques that insure infection of susceptible peanut seed by the A. flavus group fungi and minimize the number of escapes. The objectives of this study were to evaluate the effects of A. parasiticus (Speare) inoculum formulation and timing of application on shell and seed colonization and aflatoxin contamination. Soil population densities of A. flavus and plant survival were also measured. Plots were inoculated using various rates either at-plant or at mid-bloom of an organic-matrix infested with A. parasiticus NRRL 2999, and/or using an aqueous conidial suspension of the fungus. Mid-bloom inoculation produced an increase of A. flavus group population densities in the soil. There were no statistical differences between treatments in aflatoxin content, or colonization of shells or seed. At-plant inoculation was associated with reduced plant emergence or survival. Inoculation at mid-bloom with the organic-matrix resulted in peanuts that ranked high in aflatoxin content. There were no correlations between aflatoxin content, colonization of seed or shells, and population densities of A. flavus in soil. Inoculation at mid-bloom with the organic-matrix, resulting in greater soil population densities and relatively higher aflatoxin levels, was an effective method to use in screening for resistance to invasion by A. flavus group fungi and contamination by aflatoxins.
- Published
- 1994
50. Field Evaluation of Susceptibility to Meloidogyne arenaria in Arachis hypogaea Plant Introductions
- Author
-
J P, Noe, C C, Holbrook, and N A, Minton
- Subjects
food and beverages ,Article - Abstract
Resistance to Meloidogyne arenaria race 1 is not currently available in commercial peanut cultivars. Moderate levels of resistance have been identified in Arachis hypogaea plant introductions (PI) in previous greenhouse studies. The purpose of this work was to evaluate the effects of resistance in peanut PI on populations dynamics of M. arenaria in field plots. The PI designated as resistant in greenhouse studies had fewer M. arenaria in roots than the most susceptible PI. At midseason and at the end of the season, resistant PI had fewer M. arenaria in rhizosphere soil than the most susceptible PI. Seven resistant PI had lower numbers of M. arenaria than 'Florunner' at the end of the growing season. Gall index, egg mass index, number of eggs/plant, and number of eggs/g root from greenhouse screening were highly correlated with population levels of M. arenaria in the field, especially at midseason. These greenhouse indices should provide reliable estimates of host suitability in future studies.
- Published
- 2009
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