66 results on '"C. Bacchus"'
Search Results
2. Clonal integration site expansion of infected cells is a main contributor of HIV persistence in more differentiated T cell subsets during suppressive ART
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J. Symons, C. Bacchus-Souffan, A. Chopra, S. Leary, D. Cameron, P.U. Cameron, R. Hoh, H. Ahn, S.G. Deeks, J.M. McCune, S. Mallal, P.W. Hunt, and S.R. Lewin
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Microbiology ,QR1-502 ,Public aspects of medicine ,RA1-1270 - Published
- 2019
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3. Advocating for a single-payer healthcare system: What is the role of public health academics?
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Alexa B. D'Angelo, Erinn C. Bacchus, and Emma K. Tsui
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- 2022
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4. Combined Experimental and Theoretical Studies on Electron Transfer in Potassium Collisions with CCl
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K, Regeta, S, Kumar, T, Cunha, M, Mendes, A I, Lozano, P J S, Pereira, G, García, A M C, Moutinho, M-C, Bacchus-Montabonel, and P, Limão-Vieira
- Abstract
Negative ion formation in electron transfer experiments from fast neutral potassium (K) atom collisions with neutral tetrachloromethane (CCl
- Published
- 2020
5. Characterization of Resting Holes and Their Use by the Antillean Manatee (Trichechus manatus manatus) in the Drowned Cayes, Belize
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Caryn Self-Sullivan, Stephen G. Dunbar, and Marie-Lys C. Bacchus
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biology ,Aquatic Science ,Nocturnal ,biology.organism_classification ,Substrate (marine biology) ,Water depth ,Oceanography ,Seagrass ,Habitat ,biology.animal ,Manatee ,Animal Science and Zoology ,Trichechus manatus manatus ,Antillean manatee ,Geology ,Nature and Landscape Conservation - Abstract
In the Drowned Cayes area of Belize, manatees (Trichechus manatus manatus) are commonly observed resting in depressions in the substrate, locally referred to as manatee resting holes. To understand why manatees prefer locations with resting holes, the physical and environmental attributes of the depressions were characterized and diurnal and nocturnal use by manatees at four resting hole sites were documented over two summers. Twelve resting hole sites were compared with 20 non-resting hole sites in the Drowned Cayes, using water depth, substrate type, vegetation, water velocity, salinity, and water temperature. Four resting holes were chosen for repeated diurnal and nocturnal observations, during which sea and weather conditions were recorded in addition to the presence/absence of manatees. Resting holes were significantly deeper and had slower surface water velocity than areas without resting holes. A total of 168 point scans were conducted over 55 d, resulting in 39 manatee sightings over two summers. There was a significant difference in the number of sightings between research years and between day and night scans. Given the large number of resting holes in the Drowned Cayes, many of which are in sheltered areas with slow currents, it is possible that manatees select these spots based on the tranquility of the water and environment. The combination of slow currents, protection from waves, low numbers of boats, and nearby seagrass beds would make these ideal resting areas. These findings have implications for the conservation of important manatee habitat.
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- 2009
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6. Wave packet methods for charge exchange processes in ion-atom collisions
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Michèle Desouter-Lecomte, M-C Bacchus-Montabonel, Ezinvi Baloitcha, and Nathalie Vaeck
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Approximation theory ,Chemistry ,Wave packet ,General Physics and Astronomy ,chemistry.chemical_element ,Computational physics ,Ion ,symbols.namesake ,Fourier transform ,Quantum mechanics ,symbols ,Physical and Theoretical Chemistry ,Hamiltonian (quantum mechanics) ,Helium ,Resolvent ,Charge exchange - Abstract
The efficiency of different time-independent and time-dependent wave packet methods to calculate charge-exchange cross sections is discussed. The time-independent spectral projection method is based on the Chebyshev expansion of the resolvent function and represents an interesting alternative to the usual Fourier method which involves a time propagation. On the other hand, the flux operator method still requires propagation in time but uses the properties of absorbing potentials in order to calculate the flux operator matrix elements. We show the necessity of introducing the appropriate Hankel–Riccati functions when the full Hamiltonian contains a centrifugal term in 1/R2 in order to reduce the computational time. The collisional system Si4++He is studied as a test case.
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- 2001
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7. Electron capture in the collision of mass-selected hydrogen-cluster ions with helium atoms
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M.J. Gaillard, S. Louc, N. Gonçalves, N. V. de Castro Faria, B. Farizon, M. Carré, J. P. Buchet, M. Farizon, Ginette Jalbert, M. C. Bacchus-Montabonel, and H. Luna
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Physics ,chemistry ,Hydrogen ,Electron capture ,Cluster (physics) ,chemistry.chemical_element ,Atomic physics ,Collision ,Atomic and Molecular Physics, and Optics ,Helium ,Ion - Published
- 1998
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8. Ab initiomolecular treatment of charge transfer bySi4+ions in helium
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P. Ceyzeriat and M. C. Bacchus-Montabonel
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Physics ,Range (particle radiation) ,chemistry ,Electron capture ,Ab initio ,chemistry.chemical_element ,Semiclassical physics ,Charge (physics) ,Atomic physics ,Resonance (particle physics) ,Atomic and Molecular Physics, and Optics ,Helium ,Ion - Abstract
multicharged ion on helium have been determined by means ofconfiguration-interaction methods. The total and partial electron capture cross sections have been determinedusing a semiclassical approach in the 2-eV–60-keV laboratory energy range. A sharp resonance has beenexhibited for a 45.455-eV collision energy.@S1050-2947~98!00808-7#PACS number~s!: 34.70.1eI. INTRODUCTION
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- 1998
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9. Ab initio molecular treatment of electron capture processes in the B3++He collision
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M. C. Bacchus-Montabone, M. Gargaud, and F. Fraija
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Materials science ,chemistry ,Ab initio quantum chemistry methods ,Electron capture ,Ab initio ,chemistry.chemical_element ,Configuration interaction ,Collision ,Molecular physics ,Potential energy ,Atomic and Molecular Physics, and Optics ,Helium ,Ion - Abstract
The potential energy curves and the coupling matrix elements of the1∑1 and1Π states involved in the collision of the B3+(1s 2) multicharged ion on a He target have been calculated by means of an ab initio method with configuration interaction. The total and partial capture cross-sections have been determined, using a semi-classical method. The results are in good agreement with experiment, exhibiting a strong influence of rotational coupling even at low energies.
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- 1994
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10. COL05-03 : Un traitement précoce en primo-infection VIH protège les CD4 mémoires centrales et naïves et peut induire une rémission de l’infection
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Adeline Mélard, Christine Rouzioux, Asier Sáez-Cirión, Antoine Cheret, C. Bacchus, Brigitte Autran, and Laurence Meyer
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Infectious Diseases - Abstract
Introduction – objectifs Exploration du reservoir dans les sous-populations CD4 circulantes (SP) apres 2 ans d’un traitement antiretroviral initie en primoinfection VIH (PHI2). Materiels et methodes 12 patients randomises de l’essai OPTIPRIM. J0 et M24 : quantification de l’ADN-VIH total et analyse phylogenetique de la quasiespece virale dans les cellules triees quiescentes, naives (TN), memoires centrales (TCM), transitionnelles (TTM), effectrices (TEM). M24 : capacite des SP a produire des virus par activation in vitro et comparaison des niveaux d’ADN-VIH dans les SP des PHI2 versus 9 patients traites en PHI 6 ans en mediane (PHI6) et 11 controleurs post-traitement traites en PHI (PTC). Resultats De J0 a M24 : augmentation du nombre des SP (p Conclusion Un traitement precoce de deux ans en PHI protege les TCM et TN de l’infection. Un traitement de plus longue duree est necessaire pour atteindre une reduction profonde du reservoir VIH et augmenter les cas de PTC.
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- 2014
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11. State-selective electron capture by O2+from He
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M C Bacchus-Montabonel, C Courbin, and R McCarroll
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Physics ,Electron capture ,State selective ,Ab initio ,Semiclassical physics ,chemistry.chemical_element ,Condensed Matter Physics ,Collision ,Atomic and Molecular Physics, and Optics ,Ion ,chemistry ,Physics::Atomic and Molecular Clusters ,Atomic physics ,Adiabatic process ,Helium - Abstract
Cross sections are calculated for the charge transfer of O2+ ions in collision with helium at impact energies up to 625 eV amu-1. The adiabatic potential energies and the relevant radial coupling matrix elements of the quasi-molecular system are calculated by means of ab initio methods. The collision dynamics are subsequently treated by a semiclassical formalism. The results are found to be in fair agreement with experimental measurements and improve previous theoretical calculations.
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- 1991
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12. Theoretical treatment of direct and indirect processes in ion-biomolecule collisions
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E. Bene, E. Rozsályi, Á. Vibók, G. J. Halász, M. C. Bacchus-Montabonel, Károly Tokési, and Béla Sulik
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Delocalized electron ,Chemistry ,Chemical physics ,Radical ,Ab initio ,Linear molecular geometry ,Electron ,Atomic physics ,Quantum chemistry ,Ion ,Direct process - Abstract
Test case collision systems for direct and indirect processes in the action of radiation on the biological medium have been investigated theoretically by means of ab initio quantum chemistry molecular methods followed by a semiclassical dynamical treatment. As a direct process, we have studied the charge transfer of the RNA base uracil on Cq+ ions (q = 2,4). The process depends strongly on the orientation of the projectile towards the uracil target, in particular for the C4++uracil reaction, and shows a significant delocalization of the π electrons of the uracil ring towards the carbon ion. The collision of C2+ ions on the OH radical has been also investigated as a model of the action of ions on OH radicals created in the medium, in order to have a look to some possible indirect processes. The approach in the linear geometry with consideration of the relaxation of the OH target has been considered.
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- 2008
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13. Anisotropic effect in the charge transfer ofCq+ions with uracil
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M. C. Bacchus-Montabonel and Y. S. Tergiman
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Physics ,Quantitative Biology::Biomolecules ,Ab initio ,Semiclassical physics ,Collision system ,Uracil ,Charge (physics) ,Quantitative Biology::Genomics ,Molecular physics ,Atomic and Molecular Physics, and Optics ,Ion ,Orientation (vector space) ,chemistry.chemical_compound ,chemistry ,Atomic physics ,Nuclear Experiment ,Anisotropy - Abstract
The anisotropy effect in charge transfer induced by collision of C{sup q+} ions (q=2,4) on uracil has been studied theoretically using ab initio molecular methods followed by a semiclassical dynamical treatment. The process depends strongly on the orientation of the projectile in the C{sup 4+}+uracil reaction and is favored around the perpendicular direction. The effect is weaker in the C{sup 2+}+uracil collision system where cross-sections remain low.
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- 2006
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14. Quantum dynamics simulations of photodissociation reactions
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Nathalie Vaeck, M-C Bacchus-Montabonel, Benjamin Lasorne, Michèle Desouter-Lecomte, Laboratoire de Chimie Physique D'Orsay (LCPO), Université Paris-Sud - Paris 11 (UP11)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Spectrométrie Ionique et Moléculaire (LASIM), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), Service de Chimie Quantique et Photophysique, Université libre de Bruxelles (ULB), Département de Chimie, and Université de Liège
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Chemistry ,Wave packet ,Quantum dynamics ,Photodissociation ,Ab initio ,Condensed Matter Physics ,01 natural sciences ,Molecular physics ,Potential energy ,Atomic and Molecular Physics, and Optics ,symbols.namesake ,0103 physical sciences ,symbols ,[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph] ,Physical and Theoretical Chemistry ,010306 general physics ,Hamiltonian (quantum mechanics) ,010303 astronomy & astrophysics ,Quantum ,ComputingMilieux_MISCELLANEOUS - Abstract
Wave packet simulations using ab initio potential energy surfaces (PES) have been developed within the framework of the constrained Hamiltonian methodology. The approach is presented with the example of bromoacetyl chloride photodissociation. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem 106: 670 - 675, 2006
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- 2006
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15. State-selective single and double electron capture in the collision ofN4+with He
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M. C. Bacchus-Montabonel and Y. S. Tergiman
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Physics ,Range (particle radiation) ,Electron capture ,State selective ,Ab initio ,Semiclassical physics ,Configuration interaction ,Collision ,Molecular physics ,Atomic and Molecular Physics, and Optics ,Energy (signal processing) - Abstract
Ab initio potential-energy curves and rotational and radial coupling matrix elements of the S and P molecular states involved in the collision of N with He are determined by means of configuration interaction methods. In the 1–50-keV laboratory energy range, the total and the partial electron capture cross sections have been obtained using a semiclassical approach. Comparison with experiment shows the importance of the double capture channels.
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- 2001
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16. Ein naturwissenschaftliches Literaturkarussell. Pharmazie
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E. Graf, Chr. Beyer, C. Bacchus, and B. Schneider
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General Chemistry - Published
- 1992
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17. Event-by-event analysis of collision-induced cluster-ion fragmentation: sequential monomer evaporation versus fission reactions
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H. Luna, Mario Barbatti, S. Louc, J. P. Buchet, Michel Farizon, F. Gobet, Ginette Jalbert, M.J. Gaillard, Bernadette Farizon, M. C. Bacchus-Montabonel, M. Carré, N. Gonçalves, Tilmann D. Märk, and N. V. de Castro Faria
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chemistry.chemical_compound ,Monomer ,chemistry ,Fragmentation (mass spectrometry) ,Fission ,General Physics and Astronomy ,High Energy Physics::Experiment ,Collision ,Event analysis ,Molecular physics ,Ion - Abstract
The most abundant decay channels have been studied quantitatively for high-energy (60 keV/amu) cluster ions H (3) (+)(H (2))(m = 1-14) colliding with He atoms employing a recently developed multicoincidence technique for the simultaneous detection of the correlated fragments on an event-by-event basis. This allows us to identify decay reactions and their underlying decay mechanisms responsible for the occurrence of the U-shaped fragmentation pattern.
- Published
- 2000
18. Single and Double Electron Capture in Boron Collision Systems
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P. Honvault and M. C. Bacchus-Montabonel
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Physics ,Work (thermodynamics) ,chemistry ,Electron capture ,Semiclassical physics ,chemistry.chemical_element ,Collision ,Adiabatic process ,Boron ,Representation (mathematics) ,Potential energy ,Molecular physics - Abstract
Although single electron capture remains generally the main process in most ion-atom charge-transfer reactions, double and eventually multiple electron capture may be important in the understanding of such processes. An illustration of these mechanisms is presented on the example of the B2+ + H and B4+ + He collisions. A complete ab-initio molecular treatment of the potential energy curves and coupling matrix elements followed by a semiclassical collision dynamics has been performed for these systems. An adiabatic representation providing an unambiguous description of the molecular states has been used throughout this work. The results compare well to experimental data and improve markedly previous theoretical work.
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- 2000
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19. Collisions of ionized hydrogen clusters with helium atoms: electron capture as a function of the cluster size
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Ginette Jalbert, S. Louc, M. C. Bacchus-Montabonel, N. Gonçalves, M. Carré, N. V. de Castro Faria, H. Luna, J. P. Buchet, Bernadette Farizon, M.J. Gaillard, Michel Farizon, Institut de Physique Nucléaire de Lyon (IPNL), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3), Department of Biology and Environmental Science, Department of Molecular Neurobiology, Institute for Molecular and Cell Biology, Instituto de Ciências Biomédicas de Abel Salazar (ICBAS), Universidade do Porto, Departamento de Ciência da Computação [Minas Gerais] (DCC - UFMG), Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG), Service de Cardiologie (HIA BREST - Cardio), HIA - BREST, Université Pierre et Marie Curie - Paris 6 - UFR de Médecine Pierre et Marie Curie (UPMC), Université Pierre et Marie Curie - Paris 6 (UPMC), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), and Universidade do Porto = University of Porto
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Nuclear and High Energy Physics ,Hydrogen ,Helium atom ,Electron capture ,[PHYS.PHYS.PHYS-ATM-PH]Physics [physics]/Physics [physics]/Atomic and Molecular Clusters [physics.atm-clus] ,chemistry.chemical_element ,01 natural sciences ,010305 fluids & plasmas ,Ion ,chemistry.chemical_compound ,chemistry ,Ionization ,0103 physical sciences ,Cluster (physics) ,Molecule ,Physics::Atomic Physics ,Atomic physics ,010306 general physics ,Instrumentation ,Helium - Abstract
IPM; International audience; Electron capture cross sections of hydrogen cluster ions Hn+ colliding with atomic helium have been measured in a large range of cluster size (5⩽n⩽35) for the same velocity (1.5v0, 60 keV/u). While the electron capture cross section decreases from the H+ ion to the H3+ one, the cluster electron capture cross section is found to be independent of the cluster size and nearly equal to the capture cross section of the H3+ ion. Electron capture by hydrogen clusters on a helium atom is a process involving only the H3+ core of the cluster where the positive charge is localized. It appears that this very localized electron capture is not disturbed by the presence of molecules, up to sixteen, around the H3+ core.
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- 1998
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20. Theoretical Treatment of State-selective Charge Transfer Processes. N5++He as a Case Study
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M. C. Bacchus-Montabonel
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Physics ,Chemical physics ,State selective ,Transfer (computing) ,Charge (physics) ,Configuration interaction - Published
- 1996
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21. About the formation of He− ions
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M. C. Bacchus‐Montabonel
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Helium ions ,Chemistry ,Ab initio quantum chemistry methods ,Electron capture ,chemistry.chemical_element ,Electron ,Configuration interaction ,Atomic physics ,Molecular physics ,Helium ,Ion - Abstract
Recent experimental measurements [1] show evidence of production of fast He− ions by means of a one‐step double electron caputre process in He+(1s)+He(ls2)→He−+HHe2+ collision. The molecular calculation has been performed by means of a configuration interaction method using the CIPSI algorithm. It show an orientation of the capture towards formation of He−(1s2p2) ions, corroborating electric‐field detachment experiment [5], when a double collision mechanism should lead to He−(1s2s2p). (AIP)
- Published
- 1995
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22. Genesis and systematization of cardiovascular anomalies in murine trisomy 16
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W, Buselmaier, C, Bacchus, and H, Sterz
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Heart Defects, Congenital ,Disease Models, Animal ,Mice ,Animals ,Aorta, Thoracic ,Trisomy ,Down Syndrome ,Pulmonary Artery - Abstract
On account of genetic homologies trisomy 16 in the mouse is regarded as an animal model of Down's syndrome. A detailed evaluation of the cardiovascular system in 109 fetuses with trisomy 16 and 422 balanced siblings was performed in order to systematize the cardiovascular anomalies and to elucidate the pathogenetic mechanisms responsible for their formation. 92% of fetuses with experimentally induced trisomy 16 exhibited cardiovascular anomalies. The most common types of anomalies were hypoplasia and aplasia of the aortic arch, which appeared in 85% of the fetuses. Situs inversus of the aortic arch system was remarkably frequent (20%). Hypoplasia or aplasia of the pulmonary artery was seen in 10% of the fetuses. A too proximal insertion of the pulmonary artery into the ascending aorta was observed in 8% of the fetuses.
- Published
- 1991
23. Ein naturwissenschaftliches Literaturkarussell: Biologie
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S. Vogel, W. Bäumer, V. Storch, B. P. Kremer, and C. Bacchus
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General Chemistry - Published
- 1990
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24. Ab initio molecular treatment of electron capture processes in the B2+ + H collision.
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Honvault, P., L, M. C. Bacchus-Montabone, and Druetta, M.
- Subjects
- *
ELECTRON capture , *COLLISIONS (Physics) - Abstract
Ab initio potential energy curves and coupling matrix elements of the molecular states involved in the collision of the B2+ multicharged ion on atomic hydrogen have been obtained by means of configuration interaction methods. The total and partial electron capture cross-sections for the B2+/H system have been determined using a semi-classical method in the 0.1-190 keV laboratory energy range. The results show a strong effect due to rotational coupling. They improve markedly on previous theoretical work and are in general agreement with experimental data. [ABSTRACT FROM AUTHOR]
- Published
- 1997
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25. The determination of radial non-adiabatic coupling: HeNe2+as a case study
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M C Bacchus Montabonel, M Persico, and R Cimiraglia
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Coupling ,Physics ,symbols.namesake ,Avoided crossing ,Finite difference ,symbols ,Projection method ,Sigma ,Adiabatic process ,Hamiltonian (quantum mechanics) ,Atomic and Molecular Physics, and Optics ,Mathematical physics - Abstract
The matrix elements of the operator d/dR between the first three 1 Sigma + singlets of HeNe2+ have been calculated by the rigorous finite differences technique and by Levy's projection method, based on the determination of the effective Hamiltonian in a quasi-diabatic basis. A numerical diabatisation procedure based on the knowledge of the d/dR matrix elements has also been applied. The results of the two methods for determining non-adiabatic couplings and quasidiabatic states have been compared. The nature of the avoided crossing between the A and B 1 Sigma + states of HeNe2+ is discussed.
- Published
- 1984
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26. Blastomere karyotyping and transfer of chromosomally selected embryos
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W. Buselmaier and C. Bacchus
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Genetics ,Blastomeres ,medicine.medical_specialty ,Genetic counseling ,Cytogenetics ,Prenatal diagnosis ,Embryo ,Sexing ,Blastomere ,Biology ,Embryo Transfer ,medicine.disease ,Embryo transfer ,Disease Models, Animal ,Mice ,Pregnancy ,Karyotyping ,Prenatal Diagnosis ,medicine ,Animals ,Humans ,Female ,Trisomy ,Genetics (clinical) - Abstract
A method is described that permits the generation of four isolated blastomeres after embryo splitting of murine four-cell eggs and the subsequent chromosomal analysis of one of the obtained 1/4-blastomeres. According to the karyograms obtained, embryos can be selected for reimplantation and furthermore triplicated via the embryo splitting procedure. By employing the described experimental setup, it is possible specifically to produce trisomy 16----2n aggregation chimeras as a postnatal model system of human Down's syndrome. The design can also be used for embryo sexing in stock farming and the selective reproduction of sexed farm animals via embryo transfer. Furthermore the application of blastomere karyotyping in human genetic counseling is discussed for the descendants of carriers of Robertsonian translocations. In addition the reported method could be employed for the genotypic identification of early homozygous embryonic stages from persons carrying frequent recessive mutations. The proposed design could, therefore, widen the spectrum of prenatal diagnosis.
- Published
- 1988
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27. Defects of skeletal morphology, density, and structure in mouse fetuses with trisomy 16
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W. Buselmaier, L. Gromier, H. Sterz, C. Bacchus, and E. Eppler
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musculoskeletal diseases ,Embryology ,Pathology ,medicine.medical_specialty ,Health, Toxicology and Mutagenesis ,Long bone ,Aneuploidy ,Trisomy ,Biology ,Toxicology ,Bone and Bones ,Mice ,Bone Density ,medicine ,Animals ,Femur ,Tibia ,Ossification ,Trisomy 16 ,Anatomy ,musculoskeletal system ,medicine.disease ,Disease Models, Animal ,Skull ,medicine.anatomical_structure ,medicine.symptom ,Developmental Biology - Abstract
Skeletal anomalies present in trisomy 16 in the mouse--an animal model of human trisomy 21--are described. Altogether 27 fetuses with trisomy 16 and 118 chromosomally balanced siblings were examined radiographically and by alizarin staining on day 20 of gestation; the radiographs were analyzed by computer-aided densitometry and structural differentiation. Extensive asymmetry or abnormal fusion of the vertebral centers and alterations of the vertebral arches were observed along with rib malformations (rib-vertebra syndrome). The skull primarily exhibited anomalies of the occipital bone. Ossification of the humerus, femur, and tibia was characterized by reduced mineralization. Typical, fracture-like alterations affecting only the tibia were also observed. Measurement of the lengths of the humeri of fetuses of comparable weight revealed a growth retardation not correlatable with the degree of mineralization. The significance of these skeletal abnormalities with regard to the trisomy 21 syndrome is discussed.
- Published
- 1989
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28. Calculation of the profile of the Lyman-α line in an argon plasma
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M C Bacchus-Montabonel
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Physics ,Argon ,Hydrogen ,Ab initio ,chemistry.chemical_element ,Lyman-alpha line ,Plasma ,Atomic and Molecular Physics, and Optics ,Spectral line ,chemistry ,Physics::Atomic and Molecular Clusters ,Physics::Atomic Physics ,Physics::Chemical Physics ,Atomic physics ,Line (formation) - Abstract
The profile of the Lyman- alpha line of hydrogen in the presence of an argon plasma has been determined in the frame of the 'Unified Franck-Condon' lineshape developed by Szudy and Baylis (1975) and using an ab initio potential. A non-adiabatic representation has been introduced as an intermediate in the calculation to provide an accurate description of the states at the crossing points.
- Published
- 1985
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29. Behavioural and developmental abnormalities in mouse trisomy 19: an animal model of mental retardation induced by chromosome imbalance
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Heinz Winking, C. Bacchus, G. Grohé, and W. Buselmaier
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Genetics ,Embryology ,Developmental profile ,Behavior, Animal ,Health, Toxicology and Mutagenesis ,Age Factors ,Physiology ,Chromosome ,Aneuploidy ,Trisomy ,Biology ,Toxicology ,medicine.disease ,Mice ,Animal model ,Chromosome 19 ,Intellectual Disability ,medicine ,Gestation ,Animals ,Perinatal period ,Growth Disorders ,Developmental Biology - Abstract
Murine trisomy 19 (Ts19) can be regarded as a general model of human trisomies. It is the only autosomal trisomy in the mouse that survives the perinatal period. Therefore, it is the only animal model available for postnatal investigations of trisomy-specific mental retardation. To evaluate the extent of developmental retardation during the late-embryonic and fetal period of gestation, total body weight development was documented for 60 Ts19-fetuses and compared with that of 219 euploid in utero-mates. In addition, a postnatal study on body-weight development of 77 Ts19-neonates and 74 euploid littermates was performed starting on day 1 postpartum and continuing until spontaneous death or until day 22. Forty-seven Ts19-individuals were further tested in nine behavioural test systems in order to determine their neurophysiological developmental profile. Findings were compared with age-dependent morphologic and physiologic parameters. The data obtained in the present study show a significant retardation of organ- and body-weight development in Ts19-mice starting on day 14 of gestation. Retardation of physiological parameters is progressive and persists throughout the perinatal and postnatal periods. Furthermore, the trisomic individuals showed specific behavioural abnormalities.
- Published
- 1988
30. Genesis and systematization of cardiovascular anomalies and analysis of skeletal malformations in murine trisomy 16 and 19. Two animal models for human trisomies
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C. Bacchus, Suman Sahai, H. Winking, H. Sterz, and W. Buselmaier
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Genetics ,Heart Defects, Congenital ,Down syndrome ,Trisomy 16 ,Aneuploidy ,Trisomy ,Mouse Trisomy 16 ,Biology ,Bioinformatics ,medicine.disease ,Human genetics ,Bone and Bones ,Chromosome Banding ,Disease Models, Animal ,Mice ,Chromosome 16 ,Chromosome 19 ,Karyotyping ,medicine ,Animals ,Genetics (clinical) - Abstract
On account of genetic homologies, trisomy 16 in the mouse is generally regarded as a direct animal model of Down's syndrome. Mouse trisomy 19, on the other hand, can be seen as a general model of human trisomies. A detailed evaluation of the cardiovascular system and skeleton in 109 fetuses with trisomy 16 and 422 balanced siblings was carried out in order to systematize the cardiovascular anomalies and the pathogenetic mechanisms responsible for their formation according to (1) general retardation, (2) genetically determined impairment of neural-crest cell migration, and (3) direct gene action on organogenesis. Skeletal malformations in the form of a rib-vertebra syndrome encountered in Ts 16 are described here for the first time. In 108 fetuses and 219 neonates resulting from cross-breeding to induce trisomy 19, we found no significant increase in the frequency of the foregoing anomalies. These results are discussed with regard to a chromosome-specific genetic influence as opposed to a general effect of chromosome imbalance. The specificity of the Ts16 syndrome is compared with that of individual organ anomalies as can be induced by teratogenic agents. Our investigation shows that specific malformation patterns of a particular type can be produced by a variety of methods. However, the overall patterns of the two syndromes are highly chromosome-specific. On detailed examination, the malformation pattern of mouse trisomy 16 shows significant similarities with that of human trisomy 21.
- Published
- 1987
31. The determination of radial non-adiabatic coupling: HeNe2+as a case study
- Author
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Montabonel, M -C Bacchus, primary, Cimiraglia, R, additional, and Persico, M, additional
- Published
- 1984
- Full Text
- View/download PDF
32. TRAPPING OF NOBLE GASES BY RADIATIVE ASSOCIATION WITH IN THE PROTOSOLAR NEBULA.
- Author
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F. Pauzat, M-C. Bacchus-Montabonel, Y. Ellinger, and O. Mousis
- Published
- 2016
- Full Text
- View/download PDF
33. Theoretical study of electron exchange in Mg2+–B collisions.
- Author
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M Amami, A Zaidi, A Moussa, S Lahmar, and M-C Bacchus-Montabonel
- Subjects
ION energy ,ELECTROLYSIS ,INTERMEDIATES (Chemistry) ,CHARGE transfer ,ELECTRON donor-acceptor complexes ,ELECTRON capture - Abstract
The electron capture of Mg
2+ ions in collisions with boron atoms has been investigated using ab initio quantum chemical approaches. The potential energies of the electronic states implicated in the process together with the non adiabatic coupling matrix elements have been calculated by multi-reference configuration interaction methods. Total and partial cross sections for the charge transfer reaction are determined in the (1–600) keV impact energy range by means of semi-classical approaches. A detailed analysis of the electron capture mechanism taking into account radial and rotational interactions has been performed and compared to previous studies on collision systems involving the Mg2+ projectile ion. [ABSTRACT FROM AUTHOR]- Published
- 2015
- Full Text
- View/download PDF
34. The determination of radial non-adiabatic coupling: HeNe2+ as a case study.
- Author
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Montabonel, M. -C. Bacchus, Cimiraglia, R., and Persico, M.
- Published
- 1984
- Full Text
- View/download PDF
35. Clinical research for global needs of radiation oncology.
- Author
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Baumann M, Bacchus C, Aznar MC, Coppes RP, Deutsch E, Georg D, Haustermans K, Hoskin P, Krause M, Lartigau EF, Lee AWM, Löck S, Offersen BV, Thwaites DI, van der Heide UA, Valentini V, and Overgaard J
- Subjects
- Humans, Surveys and Questionnaires, Radiation Oncology education, Internship and Residency
- Abstract
Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
- Published
- 2024
- Full Text
- View/download PDF
36. Estimating the contribution of CD4 T cell subset proliferation and differentiation to HIV persistence.
- Author
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Reeves DB, Bacchus-Souffan C, Fitch M, Abdel-Mohsen M, Hoh R, Ahn H, Stone M, Hecht F, Martin J, Deeks SG, Hellerstein MK, McCune JM, Schiffer JT, and Hunt PW
- Subjects
- Humans, Male, CD4-Positive T-Lymphocytes, DNA, Viral genetics, T-Lymphocyte Subsets, Cell Proliferation, Cell Differentiation, Hyperplasia, Immunologic Memory, HIV-1 genetics, HIV Infections drug therapy
- Abstract
Persistence of HIV in people living with HIV (PWH) on suppressive antiretroviral therapy (ART) has been linked to physiological mechanisms of CD4+ T cells. Here, in the same 37 male PWH on ART we measure longitudinal kinetics of HIV DNA and cell turnover rates in five CD4 cell subsets: naïve (T
N ), stem-cell- (TSCM ), central- (TCM ), transitional- (TTM ), and effector-memory (TEM ). HIV decreases in TTM and TEM but not in less-differentiated subsets. Cell turnover is ~10 times faster than HIV clearance in memory subsets, implying that cellular proliferation consistently creates HIV DNA. The optimal mathematical model for these integrated data sets posits HIV DNA also passages between CD4 cell subsets via cellular differentiation. Estimates are heterogeneous, but in an average participant's year ~10 (in TN and TSCM ) and ~104 (in TCM , TTM , TEM ) proviruses are generated by proliferation while ~103 proviruses passage via cell differentiation (per million CD4). In simulations, therapies blocking proliferation and/or enhancing differentiation could reduce HIV DNA by 1-2 logs over 3 years. In summary, HIV exploits cellular proliferation and differentiation to persist during ART but clears faster in more proliferative/differentiated CD4 cell subsets and the same physiological mechanisms sustaining HIV might be temporarily modified to reduce it., (© 2023. Springer Nature Limited.)- Published
- 2023
- Full Text
- View/download PDF
37. Are hybrid conferences the new standard?
- Author
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Baumann M, Bacchus C, Aznar MC, Coppes RP, Deutsch E, Georg D, Haustermans K, Hoskin P, Krause M, Lartigau EF, Lee AWM, Löck S, Offersen BV, Overgaard J, Thwaites DI, van der Kogel AJ, van der Heide UA, and Valentini V
- Published
- 2023
- Full Text
- View/download PDF
38. Moving away from medicines: an overview of chronic pain management.
- Author
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Bacchus C
- Subjects
- Adult, Humans, Pain Measurement, Chronic Pain drug therapy, Pain Management methods
- Abstract
Chronic pain can be debilitating and affects an increasing number of people in the UK due to an ageing population and the rising prevalence of comorbidities. Chronic pain can be primary, where it is not accounted for by another condition, or secondary, where it results from an underlying condition or injury. The National Institute for Health and Care Excellence has published updated guidance on the assessment and management of chronic pain in adults. This article explores the latest recommendations regarding medicines use in chronic primary pain and outlines appropriate non-pharmacological management strategies. It also discusses some of the barriers to implementing chronic pain management interventions, and provides advice for nurses caring for patients who are experiencing this type of pain., Competing Interests: None declared, (© 2023 RCN Publishing Company Ltd. All rights reserved. Not to be copied, transmitted or recorded in any way, in whole or part, without prior permission of the publishers.)
- Published
- 2023
- Full Text
- View/download PDF
39. The role of ESTRO guidelines in achieving consistency and quality in clinical radiation oncology practice.
- Author
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Offersen BV, Aznar MC, Bacchus C, Coppes RP, Deutsch E, Georg D, Haustermans K, Hoskin P, Krause M, Lartigau EF, Lee AWM, Löck S, Thwaites DI, van der Kogel AJ, van der Heide U, Valentini V, Overgaard J, and Baumann M
- Subjects
- Humans, Medical Oncology, Societies, Medical, Radiation Oncology
- Published
- 2023
- Full Text
- View/download PDF
40. The HIV-1 proviral landscape reveals that Nef contributes to HIV-1 persistence in effector memory CD4+ T cells.
- Author
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Duette G, Hiener B, Morgan H, Mazur FG, Mathivanan V, Horsburgh BA, Fisher K, Tong O, Lee E, Ahn H, Shaik A, Fromentin R, Hoh R, Bacchus-Souffan C, Nasr N, Cunningham AL, Hunt PW, Chomont N, Turville SG, Deeks SG, Kelleher AD, Schlub TE, and Palmer S
- Subjects
- CD4-Positive T-Lymphocytes, DNA, Viral genetics, Humans, Proviruses genetics, Viral Load, nef Gene Products, Human Immunodeficiency Virus genetics, nef Gene Products, Human Immunodeficiency Virus therapeutic use, HIV Infections drug therapy, HIV Infections genetics, HIV-1 genetics
- Abstract
Despite long-term antiretroviral therapy (ART), HIV-1 persists within a reservoir of CD4+ T cells that contribute to viral rebound if treatment is interrupted. Identifying the cellular populations that contribute to the HIV-1 reservoir and understanding the mechanisms of viral persistence are necessary to achieve an effective cure. In this regard, through Full-Length Individual Proviral Sequencing, we observed that the HIV-1 proviral landscape was different and changed with time on ART across naive and memory CD4+ T cell subsets isolated from 24 participants. We found that the proportion of genetically intact HIV-1 proviruses was higher and persisted over time in effector memory CD4+ T cells when compared with naive, central, and transitional memory CD4+ T cells. Interestingly, we found that escape mutations remained stable over time within effector memory T cells during therapy. Finally, we provided evidence that Nef plays a role in the persistence of genetically intact HIV-1. These findings posit effector memory T cells as a key component of the HIV-1 reservoir and suggest Nef as an attractive therapeutic target.
- Published
- 2022
- Full Text
- View/download PDF
41. Personalised radiation therapy taking both the tumour and patient into consideration.
- Author
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Overgaard J, Aznar MC, Bacchus C, Coppes RP, Deutsch E, Georg D, Haustermans K, Hoskin P, Krause M, Lartigau EF, Lee AWM, Löck S, Offersen BV, Thwaites DI, van der Kogel AJ, van der Heide UA, Valentini V, and Baumann M
- Subjects
- Humans, Precision Medicine, Neoplasms radiotherapy
- Published
- 2022
- Full Text
- View/download PDF
42. HIV-1 Genomes Are Enriched in Memory CD4 + T-Cells with Short Half-Lives.
- Author
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Morcilla V, Bacchus-Souffan C, Fisher K, Horsburgh BA, Hiener B, Wang XQ, Schlub TE, Fitch M, Hoh R, Hecht FM, Martin JN, Deeks SG, Hellerstein MK, McCune JM, Hunt PW, and Palmer S
- Subjects
- Adult, CD4-Positive T-Lymphocytes physiology, Disease Reservoirs virology, HIV Infections virology, Half-Life, Humans, Lymphocyte Count, Male, Middle Aged, Proviruses genetics, CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes virology, Genome, Viral immunology, HIV-1 genetics, HIV-1 immunology, Immunological Memory Cells, Virus Latency immunology
- Abstract
Future HIV-1 curative therapies require a thorough understanding of the distribution of genetically-intact HIV-1 within T-cell subsets during antiretroviral therapy (ART) and the cellular mechanisms that maintain this reservoir. Therefore, we sequenced near-full-length HIV-1 genomes and identified genetically-intact and genetically-defective genomes from resting naive, stem-cell memory, central memory, transitional memory, effector memory, and terminally-differentiated CD4
+ T-cells with known cellular half-lives from 11 participants on ART. We find that a higher infection frequency with any HIV-1 genome was significantly associated with a shorter cellular half-life, such as transitional and effector memory cells. A similar enrichment of genetically-intact provirus was observed in these cells with relatively shorter half-lives. We found that effector memory and terminally-differentiated cells also had significantly higher levels of expansions of genetically-identical sequences, while only transitional and effector memory cells contained genetically-intact proviruses that were part of a cluster of identical sequences. Expansions of identical sequences were used to infer cellular proliferation from clonal expansion. Altogether, this indicates that specific cellular mechanisms such as short half-life and proliferative potential contribute to the persistence of genetically-intact HIV-1. IMPORTANCE The design of future HIV-1 curative therapies requires a more thorough understanding of the distribution of genetically-intact HIV-1 within T-cell subsets as well as the cellular mechanisms that maintain this reservoir. These genetically-intact and presumably replication-competent proviruses make up the latent HIV-1 reservoir. Our investigations into the possible cellular mechanisms maintaining the HIV-1 reservoir in different T-cell subsets have revealed a link between the half-lives of T-cells and the level of proviruses they contain. Taken together, we believe our study shows that more differentiated and proliferative cells, such as transitional and effector memory T-cells, contain the highest levels of genetically-intact proviruses, and the rapid turnover rate of these cells contributes to the expansion of genetically-intact proviruses within them. Therefore, our study delivers an in-depth assessment of the cellular mechanisms, such as cellular proliferation and half-life, that contribute to and maintain the latent HIV-1 reservoir.- Published
- 2021
- Full Text
- View/download PDF
43. Relationship between CD4 T cell turnover, cellular differentiation and HIV persistence during ART.
- Author
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Bacchus-Souffan C, Fitch M, Symons J, Abdel-Mohsen M, Reeves DB, Hoh R, Stone M, Hiatt J, Kim P, Chopra A, Ahn H, York VA, Cameron DL, Hecht FM, Martin JN, Yukl SA, Mallal S, Cameron PU, Deeks SG, Schiffer JT, Lewin SR, Hellerstein MK, McCune JM, and Hunt PW
- Subjects
- Adult, CD4-Positive T-Lymphocytes drug effects, CD4-Positive T-Lymphocytes virology, Case-Control Studies, DNA, Viral analysis, HIV Infections drug therapy, HIV Infections immunology, HIV Infections pathology, HIV-1 drug effects, HIV-1 genetics, Humans, Male, Middle Aged, Anti-Retroviral Agents therapeutic use, CD4-Positive T-Lymphocytes pathology, Cell Differentiation, HIV Infections virology, HIV-1 immunology, Viral Load, Virus Replication
- Abstract
The precise role of CD4 T cell turnover in maintaining HIV persistence during antiretroviral therapy (ART) has not yet been well characterized. In resting CD4 T cell subpopulations from 24 HIV-infected ART-suppressed and 6 HIV-uninfected individuals, we directly measured cellular turnover by heavy water labeling, HIV reservoir size by integrated HIV-DNA (intDNA) and cell-associated HIV-RNA (caRNA), and HIV reservoir clonality by proviral integration site sequencing. Compared to HIV-negatives, ART-suppressed individuals had similar fractional replacement rates in all subpopulations, but lower absolute proliferation rates of all subpopulations other than effector memory (TEM) cells, and lower plasma IL-7 levels (p = 0.0004). Median CD4 T cell half-lives decreased with cell differentiation from naïve to TEM cells (3 years to 3 months, p<0.001). TEM had the fastest replacement rates, were most highly enriched for intDNA and caRNA, and contained the most clonal proviral expansion. Clonal proviruses detected in less mature subpopulations were more expanded in TEM, suggesting that they were maintained through cell differentiation. Earlier ART initiation was associated with lower levels of intDNA, caRNA and fractional replacement rates. In conclusion, circulating integrated HIV proviruses appear to be maintained both by slow turnover of immature CD4 subpopulations, and by clonal expansion as well as cell differentiation into effector cells with faster replacement rates., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
- Full Text
- View/download PDF
44. Radiation oncology in the new virtual and digital era.
- Author
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Aznar MC, Bacchus C, Coppes RP, Deutsch E, Georg D, Haustermans K, Hoskin P, Krause M, Lartigau EF, Löck S, Offersen B, Overgaard J, Thwaites DI, van der Kogel AJ, van der Heide UA, Valentini V, and Baumann M
- Subjects
- Humans, Radiation Oncology
- Published
- 2021
- Full Text
- View/download PDF
45. Radiation Oncology - Towards a mission-oriented approach to cancer.
- Author
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Baumann M and Bacchus C
- Subjects
- Humans, Neoplasms pathology, Neoplasms radiotherapy, Radiation Oncology
- Published
- 2020
- Full Text
- View/download PDF
46. What will radiation oncology look like in 2050? A look at a changing professional landscape in Europe and beyond.
- Author
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Baumann M, Ebert N, Kurth I, Bacchus C, and Overgaard J
- Subjects
- Early Detection of Cancer, Europe, Humans, Inventions, Neoplasms prevention & control, Neoplasms therapy, Radiation Oncology education
- Abstract
The number of newly diagnosed cancers per year is predicted to almost double in the next two decades worldwide, and it remains unclear if and when this alarming trend will level off or even reverse. As such, cancer is very likely to continue to pose a major threat to human health. Radiation oncology is an indispensable pillar of cancer treatment and a well-developed discipline. Nevertheless, key trends in cancer research and care, including improved primary prevention, early detection, integrated multidisciplinary approaches, personalized strategies at all levels of care, value-based assessments of healthcare systems, and global health perspectives, will all shape the future of radiation oncology. Broader scientific advances, such as rapid progress in digitization, automation, and in our biological understanding of cancer, as well as the wider societal view of healthcare systems will also influence radiation oncology and how it is practiced. To stimulate a proactive discussion on how to adapt and reshape our discipline, this review provides some predictions on what the role and practice of radiation oncology might look like in 30 years' time., (© 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd.)
- Published
- 2020
- Full Text
- View/download PDF
47. Radiotherapy & Oncology during the COVID-19 pandemic.
- Author
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Baumann M, Overgaard J, and Bacchus C
- Subjects
- Adult, Betacoronavirus, COVID-19, Humans, SARS-CoV-2, Coronavirus Infections complications, Neoplasms complications, Neoplasms radiotherapy, Pandemics, Pneumonia, Viral complications
- Published
- 2020
- Full Text
- View/download PDF
48. Continuously getting a bit more picky….
- Author
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Baumann M and Bacchus C
- Published
- 2019
- Full Text
- View/download PDF
49. Polyfunctional HIV-specific T cells in Post-Treatment Controllers.
- Author
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Samri A, Bacchus-Souffan C, Hocqueloux L, Avettand-Fenoel V, Descours B, Theodorou I, Larsen M, Saez-Cirion A, Rouzioux C, and Autran B
- Subjects
- Humans, Secondary Prevention, Anti-HIV Agents therapeutic use, CD4-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes immunology, HIV Infections drug therapy, HIV Infections immunology
- Abstract
To further understand the exceptional HIV-1 control observed in Post-Treatment Controllers (PTCs) from the Virological and Immunological Sustained CONtrol after Treatment Interruption study we investigated their HIV-specific T-cell responses. Polyfunctionality of HIV-specific CD4 and CD8 T cells and the ratios of HIV-specific CD4 T cells per infected cells were similar in post-treatment controllers, continuously early-treated patients and long-term non-progressors Overall early treatment appears to preserve robust HIV-specific CD4 T cells, which might contribute to the posttreatment control of HIV.
- Published
- 2016
- Full Text
- View/download PDF
50. Combined ART started during acute HIV infection protects central memory CD4+ T cells and can induce remission.
- Author
-
Chéret A, Bacchus-Souffan C, Avettand-Fenoël V, Mélard A, Nembot G, Blanc C, Samri A, Sáez-Cirión A, Hocqueloux L, Lascoux-Combe C, Allavena C, Goujard C, Valantin MA, Leplatois A, Meyer L, Rouzioux C, and Autran B
- Subjects
- Adult, Female, Humans, Immunophenotyping, Male, Middle Aged, Treatment Outcome, Young Adult, Anti-Retroviral Agents therapeutic use, Antiretroviral Therapy, Highly Active methods, CD4-Positive T-Lymphocytes immunology, HIV Infections drug therapy, HIV Infections immunology, Secondary Prevention methods
- Abstract
Background: Therapeutic control of HIV replication reduces the size of the viral reservoir, particularly among central memory CD4+ T cells, and this effect might be accentuated by early treatment., Methods: We examined the effect of ART initiated at the time of the primary HIV infection (early ART), lasting 2 and 6 years in 11 and 10 patients, respectively, on the HIV reservoir in peripheral resting CD4+ T cells, sorted into naive (TN), central memory (TCM), transitional memory (TTM) and effector memory (TEM) cells, by comparison with 11 post-treatment controllers (PTCs)., Results: Between baseline and 2 years, CD4+ T cell subset numbers increased markedly (P < 0.004) and HIV DNA levels decreased in all subsets (P < 0.009). TTM cells represented the majority of reservoir cells at both timepoints, T cell activation status normalized and viral diversity remained stable over time. The HIV reservoir was smaller after 6 years of early ART than after 2 years (P < 0.019), and did not differ between PTCs and patients treated for 6 years. One patient, who had low reservoir levels in all T cell subsets after 2 years of treatment similar to the levels in PTCs, spontaneously controlled viral replication during 18 months off treatment., Conclusions: Early prolonged ART thus limits the size of the HIV reservoir, protects long-lived cells from persistent infection and may enhance post-treatment control., (© The Author 2015. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2015
- Full Text
- View/download PDF
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