40 results on '"Burdziński, G."'
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2. The Remarkable Influence of M2δ to Thienyl π Conjugation in Oligothiophenes Incorporating MM Quadruple Bonds
- Author
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Burdzinski, G. T., Chisholm, M. H., Chou, P.-T., Chou, Y.-H., Feil, F., Gallucci, J. C., Ghosh, Y., Gustafson, T. L., Ho, M.-L., Liu, Y., Ramnauth, R., and Turro, C.
- Published
- 2008
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3. Time-resolved studies on the photoisomerization of a phenylene–silylene–vinylene type compound in its first singlet excited state
- Author
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Burdzinski, G., Bayda, M., Hug, G.L., Majchrzak, M., Marciniec, B., and Marciniak, B.
- Published
- 2011
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4. Photophysical and photochemical properties of the T 1 excited state of thioinosine
- Author
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Wenska, G., Koput, J., Burdziński, G., Taras-Goslinska, K., and Maciejewski, A.
- Published
- 2009
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5. Antagonistic Effects of Point Mutations on Charge Recombination and a New View of Primary Charge Separation in Photosynthetic Proteins
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Dubas, K., primary, Szewczyk, S., additional, Białek, R., additional, Burdziński, G., additional, Jones, M. R., additional, and Gibasiewicz, K., additional
- Published
- 2021
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6. Time-resolved resonance Raman investigation and ab initio calculations of the T1-state structure of thiocoumarin
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Burdzinski, G., Buntinx, G., Poizat, O., and Lapouge, C.
- Published
- 2005
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7. Bulkfill composites are affected by low power density of light
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Strykowska, M., Kubanek, S., Burdzinski, G., Nicholson, J.W., and Czarnecka, B.
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- 2017
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8. Primary Electron Transfer Reactions in Membrane-Bound Open and Closed Reaction Centers from Purple Bacterium Rhodobacter sphaeroides
- Author
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Gibasiewicz, K., primary, Pajzderska, M., additional, Karolczak, J., additional, Burdziński, G., additional, Dobek, A., additional, and Jones, M.R., additional
- Published
- 2012
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9. Photophysical and photochemical properties of the T1 excited state of thioinosine
- Author
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Wenska, G., primary, Koput, J., additional, Burdziński, G., additional, Taras-Goslinska, K., additional, and Maciejewski, A., additional
- Published
- 2009
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10. Femtosecond studies of orientational anisotropy decay of benzopyranthione in the excited S 2 state in hydrocarbons
- Author
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Burdzinski, G, Buntinx, G, Poizat, O, Toele, P, Zhang, H, and Glasbeek, M
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- 2004
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11. Femtosecond fluorescence up-conversion and transient absorption studies of the S 2 state in the hydrogen-bonded benzopyranthione–water complex
- Author
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Burdzinski, G, Maciejewski, A, Buntinx, G, Poizat, O, Toele, P, Zhang, H, and Glasbeek, M
- Published
- 2004
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12. Ultrafast quenching of the excited S 2 state of benzopyranthione by acetonitrile
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Burdzinski, G., Maciejewski, A., Buntinx, G., Poizat, O., and Lefumeux, C.
- Published
- 2004
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13. Nature of the S 2-state quenching process of benzopyranthione by hydrocarbon solvents measured by pico- and femtosecond laser spectroscopy
- Author
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Burdzinski, G, Maciejewski, A, Buntinx, G, Poizat, O, and Lefumeux, C
- Published
- 2003
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14. Photophysical and photochemical properties of the T1 excited state of thioinosine
- Author
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Wenska, G., Koput, J., Burdziński, G., Taras-Goslinska, K., and Maciejewski, A.
- Subjects
- *
PHOTOCHEMISTRY , *THIOLS , *EXCITED state chemistry , *ULTRAVIOLET radiation , *ABSORPTION , *CIRCULAR dichroism , *TEMPERATURE effect , *ACETONITRILE , *TAUTOMERISM - Abstract
Abstract: UV–VIS absorption, circular dichroism, room-temperature emission and nanosecond transient absorption measurements as well as steady-state photochemical methods were used to determine the photophysical and photochemical properties of the lowest excited triplet state (T1) of 2′,3′,5′-tri-O-acetyl-thioinosine (6-thiopurine 2′,3′,5′-tri-O-acetyl-riboside, TI) in acetonitrile (ACN) solutions. The experimental data were supplemented by ab initio quantum chemical calculations on 9-methyl-6-thiopurine (Me9TP), a model molecule for the nucleoside. The ground state tautomeric structures were computed at the MP2/aug-cc-pVTZ level of theory, and the CPCM model was used for an evaluation of the solvent effects. The results show that, in contrast to the gas phase, the thione tautomer is about 6kcal/mol more stable than the thiol form in ACN solution. The predominance of the thione tautomer of TI in solution was confirmed by the good agreement between the measured UV absorption spectrum of TI and the calculated singlet electronic transitions and intensities of the thione form of Me9TP. In addition there was a very close resemblance between the experimental UV spectrum of TI and that of its derivative fixed by the methyl group in the thione tautomeric form. The T1 state of TI was characterized by its energy, phosphorescence (), nonradiative process (ϕ nr), photochemical reaction (ϕ pch) quantum yields, intrinsic lifetime (), rate constants of self-quenching (k sq), phosphorescence (k p), and nonradiative processes (k nr). The rate constants for the quenching of the T1 state of TI by standard triplet quenchers (O2, KI) and by common constituents of nucleic acids (pyrimidine and purine nucleosides) were also determined. The results show that the T1 state of TI exhibits the properties typical of the 3(ππ*) states of aromatic thiocarbonyl compounds, i.e. weak room-temperature phosphorescence (), fast self-quenching process (k sq =7.4×109 M−1 s−1) and high reactivity towards O2 (k q ∼6.8×109 M−1 s−1). Mechanistic studies of the steady-state photolysis of TI in air-equilibrated ACN solutions revealed that TI acts as a sensitiser and an acceptor of singlet oxygen. [Copyright &y& Elsevier]
- Published
- 2009
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15. Cooperativity of ESPT and Aggregation-Induced Emission Effects-An Experimental and Theoretical Analysis of a 1,3,4-Thiadiazole Derivative.
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Budziak-Wieczorek I, Kaczmarczyk D, Rząd K, Gagoś M, Stepulak A, Myśliwa-Kurdziel B, Karcz D, Starzak K, Burdziński G, Srebro-Hooper M, and Matwijczuk A
- Subjects
- Spectrometry, Fluorescence, Solvents chemistry, Protons, Methanol, Thiadiazoles
- Abstract
4-[5-(Naphthalen-1-ylmethyl)-1,3,4-thiadiazol-2-yl]benzene-1,3-diol (NTBD) was extensively studied through stationary UV-vis absorption and fluorescence measurements in various solvents and solvent mixtures and by first-principles quantum chemical calculations. It was observed that while in polar solvents (e.g., methanol) only a single emission band emerged; the analyzed 1,3,4-thiadiazole derivative was capable of producing dual fluorescence signals in low polarity solvents (e.g., n -hexane) and certain solvent mixtures (e.g., methanol/water). As clearly follows from the experimental spectroscopic studies and theoretical modeling, the specific emission characteristic of NTBD is triggered by the effect of enol → keto excited-state intramolecular proton transfer (ESIPT) that in the case of solvent mixture is reinforced by aggregation of thiadiazole molecules. Specifically, the restriction of intramolecular rotation (RIR) due to environmental hindrance suppresses the formation of non-emissive twisted intramolecular charge transfer (TICT) excited keto* states. As a result, this particular thiadiazole derivative is capable of simultaneously producing both ESIPT and aggregation-induced emission (AIE).
- Published
- 2024
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16. Time-resolved absorption measurements quantify the competition of energy and electron transfer between quantum dots and cytochrome c.
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Sławski J, Szewczyk S, Burdziński G, Gibasiewicz K, and Grzyb J
- Subjects
- Cytochromes c chemistry, Electrons, Tellurium chemistry, Quantum Dots chemistry, Cadmium Compounds chemistry
- Abstract
We applied transient absorption spectroscopy to study the early photodynamics in a system composed of CdTe quantum dots (QDs) and cytochrome c (Cyt c) protein. In the QDs and Cyt c mixtures, about 25 % of the excited QD electrons quickly relax (∼23 ps) to the ground state and roughly 75 % decay on slower time scale - mostly due to quenching by Cyt c. On the basis of the assumed model, we estimated the contribution of electron transfer and other mechanisms to this quenching. The primary quenching mechanism is probably energy transfer but electron transfer makes a significant contribution (∼8 %), resulting in photoreduction of Cyt c. The lifetime of one fraction of reduced Cyt c (35-90 %) is ∼ 1 ms and the lifetime of the remaining fraction was longer than the ∼ 50-ms time window of the experiment. We speculate that, in the former fraction, the back electron transfer from the reduced Cyt c to QDs occurs and the latter fraction of Cyt c is stably reduced., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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17. 5-Deazaalloxazine as photosensitizer of singlet oxygen and potential redox-sensitive agent.
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Insińska-Rak M, Golczak A, Gierszewski M, Anwar Z, Cherkas V, Kwiatek D, Sikorska E, Khmelinskii I, Burdziński G, Cibulka R, Mrówczyńska L, Kolanowski JL, and Sikorski M
- Subjects
- Humans, Flavins, Water chemistry, Organic Chemicals, Oxidation-Reduction, Singlet Oxygen chemistry, Photosensitizing Agents pharmacology, Photosensitizing Agents chemistry
- Abstract
Flavins are a unique class of compounds that combine the features of singlet oxygen generators and redox-dependent fluorophores. From a broad family of flavin derivatives, deazaalloxazines are significantly underdeveloped from the point of view of photophysical properties. Herein, we report photophysics of 5-deazaalloxazine (1a) in water, acetonitrile, and some other solvents. In particular, triplet excited states of 1a in water and in acetonitrile were investigated using ultraviolet-visible (UV-Vis) transient absorption spectroscopy. The measured triplet lifetimes for 1a were all on the microsecond time scale (≈ 60 μs) in deoxygenated solutions. The quantum yield of S
1 → T1 intersystem crossing for 1a in water was 0.43 based on T1 energy transfer from 1a to indicaxanthin (5) acting as acceptor and on comparative actinometric measurements using benzophenone (6). 1a was an efficient photosensitizer for singlet oxygen in aerated solutions, with quantum yields of singlet oxygen in methanol of about 0.76, compared to acetonitrile ~ 0.74, dichloromethane ~ 0.64 and 1,2-dichloroethane ~ 0.54. Significantly lower singlet oxygen quantum yields were obtained in water and deuterated water (ФΔ ~ 0.42 and 0.44, respectively). Human red blood cells (RBC) were used as a cell model to study the antioxidant capacity in vitro and cytotoxic activity of 1a. Fluorescence-lifetime imaging microscopy (FLIM) data were analyzed by fluorescence lifetime parameters and distribution for different parts of the emission spectrum. Comparison of multidimensional fluorescent properties of RBC under physiological-like and oxidative-stress conditions in the presence and absence of 1a suggests its dual activity as probe and singlet-oxygen generator and opens up a pathway for using FLIM to analyze complex intracellular behavior of flavin-like compounds. These new data on structure-property relationship contribute to the body of information required for a rational design of flavin-based tools for future biological and biochemical applications., (© 2023. The Author(s).)- Published
- 2023
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18. Electron Transfer in a Bio-Photoelectrode Based on Photosystem I Multilayer Immobilized on the Conducting Glass.
- Author
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Szewczyk S, Goyal A, Abram M, Burdziński G, Kargul J, and Gibasiewicz K
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- Electron Transport, Oxidation-Reduction, Reducing Agents, Electrons, Photosystem I Protein Complex metabolism
- Abstract
A film of ~40 layers of partially oriented photosystem I (PSI) complexes isolated from the red alga Cyanidioschyzon merolae formed on the conducting glass through electrodeposition was investigated by time-resolved absorption spectroscopy and chronoamperometry. The experiments were performed at a range of electric potentials applied to the film and at different compositions of electrolyte solution being in contact with the film. The amount of immobilized proteins supporting light-induced charge separation (active PSI) ranged from ~10%, in the absence of any reducing agents (redox compounds or low potential), to ~20% when ascorbate and 2,6-dichlorophenolindophenol were added, and to ~35% when the high negative potential was additionally applied. The origin of the large fraction of permanently inactive PSI (65-90%) was unclear. Both reducing agents increased the subpopulation of active PSI complexes, with the neutral P700 primary electron donor, by reducing significant fractions of the photo-oxidized P700 species. The efficiencies of light-induced charge separation in the PSI film (10-35%) did not translate into an equally effective generation of photocurrent, whose internal quantum efficiency reached the maximal value of 0.47% at the lowest potentials. This mismatch indicates that the vast majority of the charge-separated states in multilayered PSI complexes underwent charge recombination.
- Published
- 2022
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19. Competition between intra-protein charge recombination and electron transfer outside photosystem I complexes used for photovoltaic applications.
- Author
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Goyal A, Szewczyk S, Burdziński G, Abram M, Kargul J, and Gibasiewicz K
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- Electron Transport, Electrons, Recombination, Genetic, Photosystem I Protein Complex chemistry, Synechocystis metabolism
- Abstract
Photosystem I (PSI) complexes isolated from three different species were electrodeposited on FTO conducting glass, forming a photoactive multilayer of the photo-electrode, for investigation of intricate electron transfer (ET) properties in such green hybrid nanosystems. The internal quantum efficiency of photo-electrochemical cells (PEC) containing the PSI-based photo-electrodes did not exceed ~ 0.5%. To reveal the reason for such a low efficiency of photocurrent generation, the temporal evolution of the transient concentration of the photo-oxidized primary electron donor, P
+ , was studied in aqueous suspensions of the PSI complexes by time-resolved absorption spectroscopy. The results of these measurements provided the information on: (1) completeness of charge separation in PSI reaction centers (RCs), (2) dynamics of internal charge recombination, and (3) efficiency of electron transfer from PSI to the electrolyte, which is the reaction competing with the internal charge recombination in the PSI RC. The efficiency of the full charge separation in the PSI complexes used for functionalization of the electrodes was ~ 90%, indicating that incomplete charge separation was not the main reason for the small yield of photocurrents. For the PSI particles isolated from a green alga Chlamydomonas reinhardtii, the probability of ET outside PSI was ~ 30-40%, whereas for their counterparts isolated from a cyanobacterium Synechocystis sp. PCC 6803 and a red alga Cyanidioschyzon merolae, it represented a mere ~ 4%. We conclude from the transient absorption data for the PSI biocatalysts in solution that the observed small photocurrent efficiency of ~ 0.5% for all the PECs analyzed in this study is likely due to: (1) limited efficiency of ET outside PSI, particularly in the case of PECs based on PSI from Synechocystis and C. merolae, and (2) the electrolyte-mediated electric short-circuiting in PSI particles forming the photoactive layer, particularly in the case of the C. reinhardtii PEC., (© 2022. The Author(s).)- Published
- 2022
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20. Competition between Photoinduced Electron Transfer and Resonance Energy Transfer in an Example of Substituted Cytochrome c-Quantum Dot Systems.
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Sławski J, Białek R, Burdziński G, Gibasiewicz K, Worch R, and Grzyb J
- Subjects
- Cytochromes c, Electron Transport, Electrons, Energy Transfer, Quantum Dots
- Abstract
Colloidal quantum dots (QDs) are nanoparticles that are able to photoreduce redox proteins by electron transfer (ET). QDs are also able to transfer energy by resonance energy transfer (RET). Here, we address the question of the competition between these two routes of QDs' excitation quenching, using cadmium telluride QDs and cytochrome c (CytC) or its metal-substituted derivatives. We used both oxidized and reduced versions of native CytC, as well as fluorescent, nonreducible Zn(II)CytC, Sn(II)CytC, and metal-free porphyrin CytC. We found that all of the CytC versions quench QD fluorescence, although the interaction may be described differently in terms of static and dynamic quenching. QDs may be quenchers of fluorescent CytC derivatives, with significant differences in effectiveness depending on QD size. SnCytC and porphyrin CytC increased the rate of Fe(III)CytC photoreduction, and Fe(II)CytC slightly decreased the rate and ZnCytC presence significantly decreased the rate and final level of reduced FeCytC. These might be partially explained by the tendency to form a stable complex between protein and QDs, which promoted RET and collisional quenching. Our findings show that there is a net preference for photoinduced ET over other ways of energy transfer, at least partially, due to a lack of donors, regenerating a hole at QDs and leading to irreversibility of ET events. There may also be a common part of pathways leading to photoinduced ET and RET. The nature of synergistic action observed in some cases allows the hypothesis that RET may be an additional way to power up the ET.
- Published
- 2021
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21. Ultrafast Dynamics of the Transoid-cis Isomer Formed in Photochromic Reaction from 3H-Naphthopyran.
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Brazevic S, Baranowski M, Sikorski M, Rode MF, and Burdziński G
- Abstract
Recent efforts in designing new 3H-naphthopyran derivatives have been focused on efficient coloration process with a short fading time of the colored transoid-cis TC isomer. It is desirable to avoid photoisomerization of TC leading to transoid-trans TT isomers in the photoreaction. Long lifetime of TT can hamper fast applications such as dynamic holographic materials and molecular actuators, the residual color is one of the serious issues for photochromic lenses. Herein we characterize the photophysical and photochemical channels of TC excited state deactivation competing with the unwanted TC→TT isomerization process. Transient absorption spectroscopy reveals a very short lifetime of the singlet excited TC (≈0.8 ps) and its deactivation channels as S
1 →S0 internal conversion (major), intersystem crossing S1 →T1 , pyran ring formation, photoenolization and TC→TT isomerization. Computations support the S1 →S0 and T1 →S0 channels as responsible for photostabilization of the TC form., (© 2020 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2020
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22. Photovoltaic activity of electrodes based on intact photosystem I electrodeposited on bare conducting glass.
- Author
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Szewczyk S, Białek R, Burdziński G, and Gibasiewicz K
- Subjects
- Electroplating, Oxidation-Reduction, Electrodes, Photosystem I Protein Complex metabolism
- Abstract
We demonstrate photovoltaic activity of electrodes composed of fluorine-doped tin oxide (FTO) conducting glass and a multilayer of trimeric photosystem I (PSI) from cyanobacterium Synechocystis sp. PCC 6803 yielding, at open circuit potential (OCP) of + 100 mV (vs. SHE), internal quantum efficiency of (0.37 ± 0.11)% and photocurrent density of up to (0.5 ± 0.1) µA/cm
2 . The photocurrent measured for OCP is of cathodic nature meaning that preferentially the electrons are injected from the conducting layer of the FTO glass to the photooxidized PSI primary electron donor, P700+ , and further transferred from the photoreduced final electron acceptor of PSI, Fb - , via ascorbate electrolyte to the counter electrode. This observation is consistent with preferential donor-side orientation of PSI on FTO imposed by applied electrodeposition. However, by applying high-positive bias (+ 620 mV) to the PSI-FTO electrode, exceeding redox midpoint potential of P700 (+ 450 mV), the photocurrent reverses its orientation and becomes anodic. This is explained by "switching off" the natural photoactivity of PSI particles (by the electrochemical oxidation of P700 to P700+ ) and "switching on" the anodic photocurrent from PSI antenna Chls prone to photooxidation at high potentials. The efficient control of the P700 redox state (P700 or P700+ ) by external bias applied to the PSI-FTO electrodes was evidenced by ultrafast transient absorption spectroscopy. The advantage of the presented system is its structural simplicity together with in situ-proven high intactness of the PSI particles.- Published
- 2020
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23. Azodicarboxylate-free esterification with triphenylphosphine mediated by flavin and visible light: method development and stereoselectivity control.
- Author
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März M, Kohout M, Neveselý T, Chudoba J, Prukała D, Niziński S, Sikorski M, Burdziński G, and Cibulka R
- Abstract
Triphenylphosphine (Ph3P) activated by various electrophiles (e.g., alkyl diazocarboxylates) represents an effective mediator of esterification and other nucleophilic substitution reactions. We report herein an aza-reagent-free procedure using flavin catalyst (3-methyl riboflavin tetraacetate), triphenylphosphine, and visible light (448 nm), which allows effective esterification of aromatic and aliphatic carboxylic acids with alcohols. Mechanistic study confirmed that photoinduced electron transfer from triphenylphosphine to excited flavin with the formation of Ph3P˙+ is a crucial step in the catalytic cycle. This allows reactive alkoxyphosphonium species to be generated by reaction of an alcohol with Ph3P˙+ followed by single-electron oxidation. Unexpected stereoselectivity control by the solvent was observed, allowing switching from inversion to retention of configuration during esterification of (S)- or (R)-1-phenylethanol; for example with phenylacetic acid, the ratio shifting from 10 : 90 (retention : inversion) in trifluoromethylbenzene to 99.9 : 0.1 in acetonitrile. Our method uses nitrobenzene to regenerate the flavin photocatalyst. This new approach to flavin re-oxidation has also been successfully proved in benzyl alcohol oxidation, which is a "standard" process among flavin-mediated photooxidations.
- Published
- 2018
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24. Acceleration of the excitation decay in Photosystem I immobilized on glass surface.
- Author
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Szewczyk S, Giera W, Białek R, Burdziński G, and Gibasiewicz K
- Subjects
- Chlorophyll metabolism, Energy Transfer, Fluorine chemistry, Glass, Immobilized Proteins chemistry, Immobilized Proteins metabolism, Kinetics, Synechocystis metabolism, Tin Compounds chemistry, X-Ray Absorption Spectroscopy, Photosystem I Protein Complex chemistry, Photosystem I Protein Complex metabolism
- Abstract
Femtosecond transient absorption was used to study excitation decay in monomeric and trimeric cyanobacterial Photosystem I (PSI) being prepared in three states: (1) in aqueous solution, (2) deposited and dried on glass surface (either conducting or non-conducting), and (3) deposited on glass (conducting) surface but being in contact with aqueous solvent. The main goal of this contribution was to determine the reason of the acceleration of the excitation decay in dried PSI deposited on the conducting surface relative to PSI in solution observed previously using time-resolved fluorescence (Szewczyk et al., Photysnth Res 132(2):111-126, 2017). We formulated two alternative working hypotheses: (1) the acceleration results from electron injection from PSI to the conducting surface; (2) the acceleration is caused by dehydration and/or crowding of PSI proteins deposited on the glass substrate. Excitation dynamics of PSI in all three types of samples can be described by three main components of subpicosecond, 3-5, and 20-26 ps lifetimes of different relative contributions in solution than in PSI-substrate systems. The presence of similar kinetic components for all the samples indicates intactness of PSI proteins after their deposition onto the substrates. The kinetic traces for all systems with PSI deposited on substrates are almost identical and they decay significantly faster than the kinetic traces of PSI in solution. We conclude that the accelerated excitation decay in PSI-substrate systems is caused mostly by dense packing of proteins.
- Published
- 2018
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25. Factors Affecting the Performance of Champion Silyl-Anchor Carbazole Dye Revealed in the Femtosecond to Second Studies of Complete ADEKA-1 Sensitized Solar Cells.
- Author
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Sobuś J, Gierczyk B, Burdziński G, Jancelewicz M, Polanski E, Hagfeldt A, and Ziółek M
- Abstract
Record laboratory efficiencies of dye-sensitized solar cells have been recently reported using an alkoxysilyl-anchor dye, ADEKA-1 (over 14 %). In this work we use time-resolved techniques to study the impact of key preparation factors (dye synthesis route, addition of co-adsorbent, use of cobalt-based electrolytes of different redox potential, creation of insulating Al
2 O3 layers and molecule capping passivation of the electrode) on the partial charge separation efficiencies in ADEKA-1 solar cells. We have observed that unwanted fast recombination of electrons from titania to the dye, probably associated with the orientation of the dyes on the titania surface, plays a crucial role in the performance of the cells. This recombination, taking place on the sub-ns and ns time scales, is suppressed in the optimized dye synthesis methods and upon addition of the co-adsorbent. Capping treatment significantly reduces the charge recombination between titania and electrolyte, improving the electron lifetime from tens of ms to hundreds of ms, or even to single seconds. Similar increase in electron lifetime is observed for homogenous Al2 O3 over-layers on titania nanoparticles, however, in this case the total solar cells photocurrent is decreased due to smaller electron injection yield from the dye. Our studies should be important for a broader use of very promising silyl-anchor dyes and the further optimization and development of dye-sensitized solar cells., (© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2016
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26. Bacteriopheophytin triplet state in Rhodobacter sphaeroides reaction centers.
- Author
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Białek R, Burdziński G, Jones MR, and Gibasiewicz K
- Subjects
- Carotenoids metabolism, Energy Transfer, Kinetics, Oxygen metabolism, Pheophytins metabolism, Photosynthetic Reaction Center Complex Proteins chemistry, Photosynthetic Reaction Center Complex Proteins metabolism, Carotenoids chemistry, Pheophytins chemistry, Rhodobacter sphaeroides chemistry, Rhodobacter sphaeroides metabolism
- Abstract
It is well established that photoexcitation of Rhodobacter sphaeroides reaction centers (RC) with reduced quinone acceptors results in the formation of a triplet state localized on the primary electron donor P with a significant yield. The energy of this long-lived and therefore potentially damaging excited state is then efficiently quenched by energy transfer to the RC spheroidenone carotenoid, with its subsequent decay to the ground state by intersystem crossing. In this contribution, we present a detailed transient absorption study of triplet states in a set of mutated RCs characterized by different efficiencies of triplet formation that correlate with lifetimes of the initial charge-separated state P(+)H A (-) . On a microsecond time scale, two types of triplet state were detected: in addition to the well-known spheroidenone triplet state with a lifetime of ~4 μs, in some RCs we discovered a bacteriopheophytin triplet state with a lifetime of ~40 μs. As expected, the yield of the carotenoid triplet increased approximately linearly with the lifetime of P(+)H A (-) , reaching the value of 42 % for one of the mutants. However, surprisingly, the yield of the bacteriopheophytin triplet was the highest in RCs with the shortest P(+)H A (-) lifetime and the smallest yield of carotenoid triplet. For these the estimated yield of bacteriopheophytin triplet was comparable with the yield of the carotenoid triplet, reaching a value of ~7 %. Possible mechanisms of formation of the bacteriopheophytin triplet state are discussed.
- Published
- 2016
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27. Weak temperature dependence of P (+) H A (-) recombination in mutant Rhodobacter sphaeroides reaction centers.
- Author
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Gibasiewicz K, Białek R, Pajzderska M, Karolczak J, Burdziński G, Jones MR, and Brettel K
- Subjects
- Absorption, Physicochemical, Bacterial Proteins chemistry, Bacterial Proteins genetics, Electron Transport, Kinetics, Mutation, Photosynthetic Reaction Center Complex Proteins chemistry, Photosynthetic Reaction Center Complex Proteins genetics, Rhodobacter sphaeroides genetics, Temperature, Thermodynamics, Bacterial Proteins metabolism, Models, Molecular, Photosynthetic Reaction Center Complex Proteins metabolism, Rhodobacter sphaeroides metabolism
- Abstract
In contrast with findings on the wild-type Rhodobacter sphaeroides reaction center, biexponential P (+) H A (-) → PH A charge recombination is shown to be weakly dependent on temperature between 78 and 298 K in three variants with single amino acids exchanged in the vicinity of primary electron acceptors. These mutated reaction centers have diverse overall kinetics of charge recombination, spanning an average lifetime from ~2 to ~20 ns. Despite these differences a protein relaxation model applied previously to wild-type reaction centers was successfully used to relate the observed kinetics to the temporal evolution of the free energy level of the state P (+) H A (-) relative to P (+) B A (-) . We conclude that the observed variety in the kinetics of charge recombination, together with their weak temperature dependence, is caused by a combination of factors that are each affected to a different extent by the point mutations in a particular mutant complex. These are as follows: (1) the initial free energy gap between the states P (+) B A (-) and P (+) H A (-) , (2) the intrinsic rate of P (+) B A (-) → PB A charge recombination, and (3) the rate of protein relaxation in response to the appearance of the charge separated states. In the case of a mutant which displays rapid P (+) H A (-) recombination (ELL), most of this recombination occurs in an unrelaxed protein in which P (+) B A (-) and P (+) H A (-) are almost isoenergetic. In contrast, in a mutant in which P (+) H A (-) recombination is relatively slow (GML), most of the recombination occurs in a relaxed protein in which P (+) H A (-) is much lower in energy than P (+) H A (-) . The weak temperature dependence in the ELL reaction center and a YLH mutant was modeled in two ways: (1) by assuming that the initial P (+) B A (-) and P (+) H A (-) states in an unrelaxed protein are isoenergetic, whereas the final free energy gap between these states following the protein relaxation is large (~250 meV or more), independent of temperature and (2) by assuming that the initial and final free energy gaps between P (+) B A (-) and P (+) H A (-) are moderate and temperature dependent. In the case of the GML mutant, it was concluded that the free energy gap between P (+) B A (-) and P (+) H A (-) is large at all times.
- Published
- 2016
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28. Carbazole Dye-Sensitized Solar Cells Studied from Femtoseconds to Seconds-Effect of Additives in Cobalt- and Iodide-Based Electrolytes.
- Author
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Sobuś J, Kubicki J, Burdziński G, and Ziółek M
- Subjects
- Absorption, Physicochemical, Electrolytes chemistry, Kinetics, Oxidation-Reduction, Carbazoles chemistry, Cobalt chemistry, Coloring Agents chemistry, Electric Power Supplies, Iodides chemistry, Solar Energy
- Abstract
Comprehensive studies of all charge-separation processes in efficient carbazole dye-sensitized solar cells are correlated with their photovoltaic parameters. An important role of partial, fast electron recombination from the semiconductor nanoparticles to the oxidized dye is revealed; this takes place on the picosecond and sub-nanosecond timescales. The charge-transfer dynamics in cobalt tris(bipyridyl) based electrolytes and iodide-based electrolyte is observed to depend on potential-determining additives in a similar way. Upon addition of 0.5 M 4-tert-butylpiridine to both types of electrolytes, the stability of the cells is greatly improved; the cell photovoltage increases by 150-200 mV, the electron injection rate decreases about five times (from 5 to 1 ps(-1) ), and fast recombination slows down about two to three times. Dye regeneration proceeds at a rate of about 1 μs(-1) in all electrolytes. Electron recombination from titania to cobalt electrolytes is much faster than that to iodide ones., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
- Full Text
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29. Comparison of TiO₂ and ZnO solar cells sensitized with an indoline dye: time-resolved laser spectroscopy studies of partial charge separation processes.
- Author
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Sobuś J, Burdziński G, Karolczak J, Idígoras J, Anta JA, and Ziółek M
- Subjects
- Nanoparticles chemistry, Particle Size, Spectrum Analysis, Surface Properties, Time Factors, Coloring Agents chemistry, Indoles chemistry, Lasers, Titanium chemistry, Zinc Oxide chemistry
- Abstract
Time-resolved laser spectroscopy techniques in the time range from femtoseconds to seconds were applied to investigate the charge separation processes in complete dye-sensitized solar cells (DSC) made with iodide/iodine liquid electrolyte and indoline dye D149 interacting with TiO2 or ZnO nanoparticles. The aim of the studies was to explain the differences in the photocurrents of the cells (3-4 times higher for TiO2 than for ZnO ones). Electrochemical impedance spectroscopy and nanosecond flash photolysis studies revealed that the better performance of TiO2 samples is not due to the charge collection and dye regeneration processes. Femtosecond transient absorption results indicated that after first 100 ps the number of photoinduced electrons in the semiconductor is 3 times higher for TiO2 than for ZnO solar cells. Picosecond emission studies showed that the lifetime of the D149 excited state is about 3 times longer for ZnO than for TiO2 samples. Therefore, the results indicate that lower performance of ZnO solar cells is likely due to slower electron injection. The studies show how to correlate the laser spectroscopy methodology with global parameters of the solar cells and should help in better understanding of the behavior of alternative materials for porous electrodes for DSC and related devices.
- Published
- 2014
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30. From ultrafast events to equilibrium--uncovering the unusual dynamics of ESIPT reaction: the case of dually fluorescent diethyl-2,5-(dibenzoxazolyl)-hydroquinone.
- Author
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Wnuk P, Burdziński G, Sliwa M, Kijak M, Grabowska A, Sepioł J, and Kubicki J
- Abstract
The excited state intramolecular proton transfer (ESIPT) reaction of the dually fluorescent 2,5-diethyl-(dibenzoxazolyl)-hydroquinone (DE-BBHQ) was studied with several time resolved techniques. The complementary character of up-conversion and time correlated single photon counting methods was demonstrated. According to the up-conversion experiments, the primary excited dienol form transforms into the monoketo tautomer in a very efficient ultrafast (∼100 fs) proton transfer reaction. The reverse process of proton transfer repopulating the excited dienol form was also observed, whose rate strongly depends on solvent polarity. Both contributions of dienol emission were univocally distinguished. The double-well potential of the S1 state of DE-BBHQ was calculated, and the nature of the phototautomer as the monoketo form was confirmed. This represents an example of how to combine different experimental methods with different temporal resolutions for unravelling ultrafast proton transfer reaction. A similar experimental strategy can be easily adopted for other systems where equilibrium between two states is observed (e.g. photoinduced electron or energy transfer).
- Published
- 2014
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31. Analysis of the temperature-dependence of P(+)HA(-) charge recombination in the Rhodobacter sphaeroides reaction center suggests nanosecond temperature-independent protein relaxation.
- Author
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Gibasiewicz K, Pajzderska M, Dobek A, Karolczak J, Burdziński G, Brettel K, and Jones MR
- Subjects
- Benzoquinones metabolism, Kinetics, Models, Molecular, Phenanthrolines chemistry, Photosynthetic Reaction Center Complex Proteins chemistry, Temperature, Thermodynamics, Time Factors, Photosynthetic Reaction Center Complex Proteins metabolism, Rhodobacter sphaeroides metabolism
- Abstract
The temperature dependence of charge recombination of the pair P(+)HA(-) in isolated reaction centers from the purple bacterium Rhodobacter sphaeroides with prereduced quinone QA was studied by sub-nanosecond to microsecond time-scale transient absorption. Overall, the kinetics slowed down substantially upon cooling from room temperature to ∼200 K, and then remained virtually unchanged down to 77 K, indicating the coexistence of two competitive pathways of charge recombination, a thermally-activated pathway appearing only above ~200 K and a temperature-independent pathway. In our modelling, the thermally activated pathway includes an uphill electron transfer from HA(-) to BA(-) leading to transient formation of the state P(+)BA(-), whereas the temperature-independent pathway is due to direct downhill electron transfer from HA(-) to P(+). At all temperatures studied, the kinetics could be approximated by a four-component decay. Detailed analysis of the lifetimes and amplitudes of particular phases over the range of temperatures suggests that the kinetically resolved phases reveal the consecutive appearance of three conformational states characterized by an increasing free energy gap between the states P(+)BA(-) and P(+)HA(-). The initial gap between these states was estimated to be only ~8 meV, the intermediate gap being ~92 meV, and the final gap ~135 meV, with no dependence on temperature. It was also calculated through a very straightforward approach that the relaxation process from the initial to the intermediate state occurs within 0.6 ± 0.1 ns, whereas the second step of relaxation from the intermediate to the final state takes 11 ± 2 ns. Both phases of the protein relaxation process are essentially temperature-independent. Possible alternative models to describe the experimental data that cannot be definitely excluded are also discussed.
- Published
- 2013
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32. Dynamics of local Stark effect observed for a complete D149 dye-sensitized solar cell.
- Author
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Burdziński G, Karolczak J, and Ziółek M
- Abstract
A complete, functioning dye-sensitized solar cell made of popular indoline D149 sensitizer is studied by means of transient absorption in visible light in the time scale of nanoseconds to seconds. Photocurrent and photovoltage decays are also measured under the same experimental conditions. A local electric field causing a Stark shift of the D149 absorption band is found to strongly influence the transient spectra and kinetics. The presence of electrons in titania has a major contribution to the Stark shift and the effect disappears over many time scales with an average rate of 5 × 10(3) s(-1). This is much slower than the decay of the oxidized dye (2 × 10(6) s(-1)) but, on the other hand, significantly faster than the decay of electrons in titania nanoparticles (3 × 10(2) s(-1) at standard AM1.5 irradiation and open circuit conditions). Possible explanations of this phenomenon are discussed. Electron recombination from the titania conduction band to the oxidized dyes proceeds at an average rate of 2-16 × 10(4) s(-1), depending on the excitation energy density, and does not influence the efficiency of dye regeneration.
- Published
- 2013
- Full Text
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33. Radiationless deactivation of 6-aminocoumarin from the S1-ICT state in nonspecifically interacting solvents.
- Author
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Krystkowiak E, Dobek K, Burdziński G, and Maciejewski A
- Subjects
- Absorption, Electron Transport, Spectrometry, Fluorescence, Coumarins chemistry, Solvents chemistry
- Abstract
This paper presents the results of a spectral (absorption and emission) and photophysical study of 6-aminocoumarin (6AC) in the solvents with which this molecule interacts only nonspecifically (n-alkanes, tetrachloromethane and 1-chloro-n-alkanes) and in nitriles. The strong effects of the solvents on the emission spectra, fluorescence quantum yield and lifetime of 6AC were observed. The results of the steady-state and time-resolved photophysical study suggest the presence of very fast nonradiative deactivation processes. It is concluded that besides fluorescence, the efficient S(1)-ICT → S(0) internal conversion in nonpolar aprotic solvents arises from vibronic interactions between close-lying S(1)-ICT(π,π*) and S(2)(n,π*) states. Moreover, unexpectedly efficient triplet state formation occurs. In nitriles the intermolecular hydrogen-bonding interactions with solvent molecules also facilitate the nonradiative decay process involving the S(1)-exciplex.
- Published
- 2012
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34. Long-living structures of photochromic salicylaldehyde azine: polarity and viscosity effects from nanoseconds to hours.
- Author
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Ziółek M, Burdziński G, and Douhal A
- Abstract
In this study, we report on the effects of solvent viscosity and polarity on the photochromic salicylaldehyde azine (SAA) molecule by examining the steady-state and UV-visible absorption results in the time scale from nanoseconds to hours, in solution and in a polymer film. For the neutral structure, the viscosity strongly affects the lifetime of the photochromic (trans-keto) tautomer by suppressing the second order quenching process, and thus increasing the photochrome lifetimes in highly viscous solvents to 500 μs in polar triacetine, and to 65 μs in non-polar squalane. Trapping SAA in a non-polar polymer film (polyethylene) results in further elongation of the photochromic lifetime (700 μs) by one order of magnitude (with respect to that in squalane), due to the retardation of the intramolecular back-isomerization. Another species, living significantly longer and absorbing more in the UV comparing to the photochrome, was identified as the syn-enol tautomer. The lifetime of this tautomer, created in a competitive mechanism to the photochrome creation, is much longer in non-polar solvents (hundreds of minutes) than in polar ones (tens of minutes), opposite to the trend observed for the photochrome. For the SAA anion, the transient living on the ns-μs time scale can be exclusively assigned to the triplet state, which is not observed for the neutral form at room temperature.
- Published
- 2012
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35. Mechanism and dynamics of intramolecular triplet state decay of 1-propyl-4-thiouracil and its α-methyl-substituted derivatives studied in perfluoro-1,3-dimethylcyclohexane.
- Author
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Wenska G, Taras-Goślińska K, Łukaszewicz A, Burdziński G, Koput J, and Maciejewski A
- Subjects
- Models, Theoretical, Propylthiouracil chemistry, Quantum Theory, Spectrophotometry, Ultraviolet, Thiouracil chemistry, Thymine chemistry, Fluorocarbons chemistry, Hydrocarbons, Fluorinated chemistry, Propylthiouracil analogs & derivatives, Thiouracil analogs & derivatives
- Abstract
The absorption, phosphorescence and phosphorescence excitation spectra, phosphorescence quantum yields, and T(1) excited state lifetimes of four 4-thiouracil derivatives were measured for the first time in chemically inert and very weakly interacting perfluoro-1,3-dimethylcyclohexane at room temperature. The set of the 4-thiouracil derivatives comprises 1-propyl-4-thiouracil (PTU) and the related compounds having a methyl substituent at the position α to the thiocarbonyl group, namely 1-propyl-4-thiothymine (PTT), 1,3-dimethyl-4-thiouracil (DMTU), and 1-methyl-3-trideuteriomethyl-4-thiouracil ([D(3)]DMTU). Quantitative information on the intramolecular decay of the T(1) excited state of the four 4-thiouracil derivatives is presented, and the mechanism and dynamics of this process are discussed. In the absence of self quenching and solvent induced deactivation, the T(1) decay of the four 4-thiouracil derivatives was dominated by intramolecular nonradiative processes (NR). The values of the rate constant k(NR) in DMTU and [D(3)]DMTU are about 4 times larger than that in PTT and about 3 times larger than that in PTU. The reasons for the enhanced nonradiative rate constant in DMTU are discussed. It is concluded that the faster rate of the nonradiative processes in DMTU is related to a larger contribution from mixing of the T(2) (nπ*) state into the lowest energy T(1) (ππ*) state, as compared to the analogous coupling in PTU and PTT. This conclusion is supported by ab initio calculations performed at the EOM-CC2/aug-cc-pVDZ level of theory. The energy spacing between the T(2) (nπ*) and T(1) (ππ*) states is estimated to be about 500, 1100, and 2000 cm(-1) for DMTU, PTU, and PTT, respectively. Among the three compounds in question, the predicted energy spacing is thus the smallest for DMTU., (This journal is © The Royal Society of Chemistry and Owner Societies 2011)
- Published
- 2011
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36. Photocycloaddition of the T1 excited state of thioinosine to uridine and adenosine.
- Author
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Wenska G, Filipiak P, Burdziński G, Pedzinski T, Hug GL, and Gdaniec Z
- Subjects
- Absorption, Acetylation, Oxygen chemistry, Temperature, Adenosine chemistry, Photochemical Processes, Thioinosine chemistry, Uridine chemistry
- Abstract
Novel photoadducts were obtained by irradiation of thioinosine (6-thiopurine riboside, TI) in deaerated aqueous solution without and in the presence of uridine and adenosine. Excitation (lambda > 300 nm) of TI to its excited S2 state yields a single bimolecular photoproduct. It is a purine-pyrimidine diriboside in which the purine ring is attached to the amide nitrogen of 6-amino-4-thioxo-5-formamidopyrimidine. When TI was irradiated in the presence of an excess of adenosine, two photoproducts were isolated: diribosides of N-(4,6-diaminopirymidin-5-yl)-N-formyl-6-aminopurine and N-(4-amino-6-formylamino-pyrimidin-5-yl)-6-aminopurine, both containing a purine and a formylaminopyrimidine (Fapy) fragment. The photoreaction of TI with uridine gave two regioisomeric photoproducts identified as diribosides containing either 5- or 6-(purin-6-yl)uracil as aglycones. A multistep mechanism leading to the stable photoproducts is proposed. In the first step of the mechanism, the C=S group of the excited TI undergoes a [2 + 2] cycloaddition regioselectively to the N(7)=C(8) bond of the purine ring or adds in a non-regioselective manner to the C(5)=C(6) bond of uracil. The unstable photoproducts thus formed undergo a series of dark reactions at room temperature. The photocycloaddition reactions originate from the excited T1 state of TI. This conclusion is supported by a combination of evidence from reaction quenching studies using both steady-state quantum yield determinations and kinetics results from nanosecond laser flash photolysis. The T1 state of TI is quenched by other TI molecules in their S0 state (self-quenching) and also by uridine and adenosine, all with large rate constants (0.8-5) x 10(9) M(-1) s(-1). The quantum yields of the reactions are in general very low (phi(R) < or = 8 x 10(-3)). The sources of the inefficiency in the photocycloaddition of TI to uridine and adenosine are discussed. The photoproducts containing the Fapy residue undergo deformylation and isomerization of the ribosyl moiety (anomerization, furanose/pyranose transformation) upon heating in aqueous solution. Products of the transformations were identified.
- Published
- 2009
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37. Ultrafast time-resolved infrared spectroscopy study of the photochemistry of N,N-diethyldiazoacetamide: rearrangement in the excited state.
- Author
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Zhang Y, Burdziński G, Kubicki J, and Platz MS
- Subjects
- Lactams chemistry, Spectroscopy, Fourier Transform Infrared, Time Factors, Acetamides chemistry, Diazonium Compounds chemistry, Photolysis
- Abstract
Ultrafast infrared spectroscopy shows that in chloroform, beta-lactam is formed immediately after the laser pulse but gamma-lactam is formed from both slow and fast processes. It is concluded that beta-lactam is formed from the diazoamide excited state via the rearrangement in the excited state (RIES) mechanism and that gamma-lactam is formed from both RIES and carbene. In methanol, both carbene decay and the rise of amide ether product are observed directly. Predictions from density functional theory calculations are consistent with these observations.
- Published
- 2009
- Full Text
- View/download PDF
38. Influence of intermolecular hydrogen bonding on the photochromic cycle of the aromatic Schiff base N,N'-bis(salicylidene)-p-phenylenediamine in solution.
- Author
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Ziółek M, Burdziński G, and Karolczak J
- Abstract
A photochromic symmetric Schiff base, N,N'-bis(salicylidene)-p-phenylenediamine, has been studied by means of stationary and time-resolved spectroscopic absorption and emission techniques in the UV-vis spectral range with particular attention to the role of intermolecular hydrogen bonds. They are found to be responsible for the solvent-assisted excited-state proton transfer (the time constant of about 400 fs) in very strongly protic solvents and the photochrome deactivation (the time constant from 0.5 micros to 3 ms) in both protic and nonprotic solvents. Moreover, formation of an isomer that competes with the photochromic cycle in solution is also observed.
- Published
- 2009
- Full Text
- View/download PDF
39. Spectroscopic and photophysical studies of the hydroquinone family of photochromic Schiff bases analyzed over a 17-orders-of-magnitude time scale.
- Author
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Ziółek M, Burdziński G, Filipczak K, Karolczak J, and Maciejewski A
- Subjects
- Hydrogen Bonding, Molecular Structure, Photochemistry, Protons, Quantum Theory, Spectrophotometry, Ultraviolet methods, Stereoisomerism, Time Factors, Hydroquinones chemistry, Schiff Bases analysis
- Abstract
The hydroquinone family of photochromic Schiff bases has been studied by means of stationary and time-resolved spectroscopic absorption and emission techniques in the UV-Vis spectral range in the temporal range from 100 fs to 1 h. The studies have revealed that besides the ultrafast excited state intramolecular proton transfer reaction there is also another deactivation channel from the initially excited state. For the symmetric molecule with two intramolecular hydrogen bonds, the efficiency of the proton transfer reaction has been found to be at least ten times reduced when compared to that of the asymmetric molecule with one intramolecular hydrogen bond. The long-lived transient species absorbing in the UV range and coexisting with the photochrome have been observed in differently interacting solvents. Evidence for different conformers of almost all of the tautomers involved in the photochromic cycle has been also found.
- Published
- 2008
- Full Text
- View/download PDF
40. Intra- and intermolecular electronic relaxation of the second excited singlet and the lowest excited triplet states of 1,3-dimethyl-4-thiouracil in solution.
- Author
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Taras-Goślińiska K, Wenska G, Skalski B, Maciejewski A, and Burdziński G
- Subjects
- Affinity Labels, Solvents, Thiouracil analogs & derivatives, Thiouracil chemistry
- Abstract
Intramolecular processes of deactivation of 1,3-dimethyl-4-thiouracil (DMTU) from the second excited singlet (S2) (pi, pi*) and the lowest excited triplet (T1) (pi, pi*) states have been studied using perfluoro-1,3-dimethylcyclohexane (PFDMCH) as a solvent. The spectral and photophysical (PP) properties of DMTU in CCl4, hexane and water have also been described. For the first time, the fluorescence from S2 state DMTU has been observed. The picosecond lifetime of DMTU in the S2 state (tau(S2)) in PFDMCH has been proposed to be determined by a very fast intramolecular reversible process of hydrogen abstraction from the ortho methyl group by the thiocarbonyl group. The shortening of tau(S2) in CCl4 is interpreted to be caused by the intermolecular interactions between DMTU (S2) and the solvent. Results of the phosphorescence decay as a function of DMTU concentration were analyzed using the Stern-Volmer formalism, which enabled determination of the intrinsic lifetime of the T1 state (tau0(T1)) and rate constants of self-quenching (k(sq)). The lifetimes, tau0(T1), of DMTU in PFDMCH and CCl4 are much longer than the values hitherto obtained in more reactive solvents. The PP properties of DMTU both in the S2 and T1 states have been shown to be determined by the thiocarbonyl group.
- Published
- 2002
- Full Text
- View/download PDF
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