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Mitochondrial DNA (mtDNA) depletion/deletions syndromes (MDDS) encompass a clinically and etiologically heterogenous group of mitochondrial disorders caused by impaired mtDNA maintenance. Among the most frequent causes of MDDS are defects in nucleoside/nucleotide metabolism, which is critical for synthesis and homeostasis of the deoxynucleoside triphosphate (dNTP) substrates of mtDNA replication. A central enzyme for generating dNTPs is ribonucleotide reductase, a critical mediator of de novo nucleotide synthesis composed of catalytic RRM1 subunits in complex with RRM2 or p53R2. Here, we report 5 probands from 4 families who presented with ptosis and ophthalmoplegia as well as other clinical manifestations and multiple mtDNA deletions in muscle. We identified 3 RRM1 loss-of-function variants, including a dominant catalytic site variant (NP_001024.1: p.N427K) and 2 homozygous recessive variants at p.R381, which has evolutionarily conserved interactions with the specificity site. Atomistic molecular dynamics simulations indicate mechanisms by which RRM1 variants affect protein structure. Cultured primary skin fibroblasts of probands manifested mtDNA depletion under cycling conditions, indicating impaired de novo nucleotide synthesis. Fibroblasts also exhibited aberrant nucleoside diphosphate and dNTP pools and mtDNA ribonucleotide incorporation. Our data reveal that primary RRM1 deficiency and, by extension, impaired de novo nucleotide synthesis are causes of MDDS., Introduction Autosomal disorders of mitochondrial DNA (mtDNA) maintenance are clinically heterogeneous and typically severe diseases with mtDNA depletion or multiple deletions leading to focal respiratory chain deficiency in affected tissues [...]

Increasing the tissue biomass and/or volume of the gastrointestinal tract (GIT) is commonly seen when animals feed on poor-quality diets. This increase can simply permit larger meal sizes, but may also rebalance nutritionally imbalanced ingesta by allowing selective absorption of limiting nutrients. In an insect herbivore, the migratory locust, a synthetic diet with a high ratio of protein to carbohydrate was found to induce mass enhancement of the GIT. When normalised for sex and overall body size, increases to the mass of the foregut and midgut caeca resulted in higher absorption (20-30%) of both protein and carbohydrate when subsequently feeding on three chemically and structurally different grasses. Greater net absorption of macronutrients occurred because these locusts ate larger meals that transited at the same time and with the same digestive efficiency as locusts in which the GIT was not enlarged. Thus, plasticity of the GIT did not improve nutritional homeostasis, but increased the rate of nutrient uptake. [ABSTRACT FROM AUTHOR]

Examination of all publicly available Oryctolagus cuniculus (rabbit) ribosome cryo-EM structures reveals numerous confusing inconsistencies. First, there are a plethora of single nucleotide differences among the various rabbit 28S and 18S rRNA structures. Second, two nucleotides are absent from the NCBI Reference Sequence for the 18S rRNA gene. Moving forward, we propose using the Broad Institute's rabbit whole genome shotgun sequence and numbering to reduce modeling ambiguity and improve consistency between ribosome models.