30 results on '"Bowman LA"'
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2. How to attract more minority editors.
- Author
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Bowman, La Barbara
- Subjects
- *
MEETINGS , *CONFERENCES & conventions , *EDITORS , *MINORITY journalists , *EXECUTIVES , *EMPLOYEE promotions - Abstract
Reports on the meeting held by several African American editors during the NABJ convention in August 2003 concerning ways to speed up the promotion of minority journalists to senior management. Opinion of Denver Post editor Greg Moore on the role of minority journalists in achieving diversity; Emphasis on the rewards of editing including how editors can influence news coverage; Establishment of a Web site that would include a list of editor jobs, training programs and biographies of editors
- Published
- 2003
3. Of Love and Death: Death Anxiety, Attachment, and Suicide as Experienced by College Students.
- Author
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Harvell-Bowman LA, Critchfield KL, Ndzana F, Stucker E, Yocca C, Wilgus K, Hurst A, and Sullivan K
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- Humans, Female, Male, Young Adult, Universities, Love, Suicidal Ideation, Suicide psychology, Adult, Adolescent, Interpersonal Relations, Students psychology, Attitude to Death, Object Attachment, Anxiety psychology
- Abstract
Drawing from the mental health crisis present on college campuses, we investigate the psychological processes associated with suicidal ideation among undergraduate students. Specifically, we used Terror Management Theory to investigate how individuals who have a history of suicidal ideation handle traditional death anxiety in coordination with Benjamin's theory underlying Interpersonal Reconstructive Therapy to explore specific attachment-based mechanisms that may allow for exceptions to the perceived meaning of death. Results show it was the fantasy of suicide itself, including its relevance in the lives of others, that was used to alleviate fear of death among the suicidal., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2024
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4. Examining the Relationship Between Chronic Pain and Mortality in U.S. Adults.
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Ray BM, Kelleran KJ, Fodero JG, and Harvell-Bowman LA
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- Humans, Male, Female, Middle Aged, United States epidemiology, Adult, Aged, Young Adult, Adolescent, Health Surveys, Aged, 80 and over, Life Style, Chronic Pain mortality, Chronic Pain epidemiology
- Abstract
Chronic pain (CP) significantly impacts quality of life and increases noncommunicable disease risk, with recent U.S. data showing a 6.3% incidence rate, surpassing diabetes, depression, and hypertension. International studies suggest higher mortality in CP populations, yet prior U.S. data are inconclusive. To investigate CP's mortality risk, we analyzed National Health Interview Survey and National Death Index data. We hypothesized that individuals with CP and high-impact CP (HICP [≥1 activity limitation]) would exhibit higher mortality rates. National Health Interview Survey provided demographics, pain reporting, lifestyle, and psychosocial data matched with National Death Index mortality records. Chi-square analyses explored the relationships between CP/HICP and demographics, lifestyle factors, psychosocial variables, and mortality. Cox proportional hazards models assessed mortality risk between groups. The weighted sample was 245,899,776; 20% reported CP and 8% HICP, both groups exhibiting higher mortality rates than pain-free individuals (CP: 5.55%, HICP: 8.79%, total: 2.82%). Hazard ratios indicated nearly double the mortality risk for CP and 2.5 times higher risk for HICP compared to those without these conditions. Adjusting for lifestyle and psychosocial factors reduced mortality risk but remained elevated compared with non-CP individuals. Heart disease, malignant neoplasms, and chronic lower respiratory diseases accounted for a higher percentage of deaths in CP cases. CP individuals showed higher rates of smoking, alcohol consumption, obesity, inactivity, depression, anxiety, emotional problems, and sleep disturbances. CP and HICP significantly influence mortality outcomes, leading to excess deaths compared with pain-free individuals. Given the relationship between pain, lifestyle, psychosocial variables, and mortality, further investigations are needed into CP causation and prevention strategies. PERSPECTIVE: This article presents evidence regarding the relationship between CP, HICP, and mortality. Additional findings are discussed regarding the impact of demographics, lifestyle, and psychosocial variables on mortality in those with versus without CP and HICP. These findings are crucial for informing future research, prevention, and healthcare management strategies., (Copyright © 2024 United States Association for the Study of Pain, Inc. Published by Elsevier Inc. All rights reserved.)
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- 2024
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5. Know Your Guidelines Series: The CDC Clinical Practice Guideline for Prescribing Opioids for Pain.
- Author
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Meilhac M, Nesbit S, Bowman LA, and Stewart RW
- Subjects
- Humans, United States, Practice Patterns, Physicians' standards, Pain drug therapy, Pain Management methods, Pain Management standards, Analgesics, Opioid therapeutic use, Practice Guidelines as Topic, Centers for Disease Control and Prevention, U.S.
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- 2024
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6. Operationalizing the new DEA exception: A novel process for dispensing of methadone for opioid use disorder at discharge from acute care settings.
- Author
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Bowman LA, Berger O, Nesbit S, Stoller KB, Buresh M, and Stewart R
- Subjects
- Humans, Patient Discharge, Hospitalization, Academic Medical Centers, Methadone therapeutic use, Opioid-Related Disorders drug therapy
- Abstract
Purpose: To describe one strategy for dispensing of methadone at emergency department (ED) and hospital discharge implemented within 2 urban academic medical centers., Summary: Expanding access to medications for opioid use disorder (OUD) is a national priority. ED visits and hospitalizations offer an opportunity to initiate or continue these lifesaving medications, including methadone and buprenorphine. However, federal regulations governing methadone treatment and significant gaps in treatment availability have made continuing methadone upon ED or hospital discharge challenging. To address this issue, the Drug Enforcement Administration (DEA) granted an exception allowing hospitals, clinics, and EDs to dispense a 72-hour supply of methadone while continued treatment is arranged. Though this exception addresses a critical unmet need, guidance for operationalizing this service is limited. To facilitate expanded patient access to methadone on ED or hospital discharge at 2 Baltimore hospitals, key stakeholders within the parent health system were identified, and a workgroup was formed. Processes were established for requesting, approving, preparing, and dispensing the methadone supply using an electronic health record order set. Multidisciplinary educational materials were created to support end users of the workflow. In the first 3 months of implementation, 42 requests were entered, of which 36 were approved, resulting in 79 dispensed methadone doses., Conclusion: This project demonstrates feasibility of methadone dispensing at hospital and ED discharge. Further work is needed to evaluate impact on patient outcomes, such as hospital and ED utilization, length of stay, linkage to treatment, and retention in treatment., (© American Society of Health-System Pharmacists 2023. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2024
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7. Evaluation of opioid use disorder treatment outcomes in patients receiving split daily versus once daily dosing of buprenorphine-naloxone.
- Author
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Borris JB, Dowd-Green C, Bowman LA, Nesbit SA, Fingerhood M, and Stewart RW
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- Adult, Humans, Buprenorphine, Naloxone Drug Combination therapeutic use, Narcotic Antagonists, Retrospective Studies, Treatment Outcome, Buprenorphine, Opioid-Related Disorders drug therapy
- Abstract
Introduction: In clinical practice, sublingual (SL) buprenorphine-naloxone is prescribed as once daily or split daily dosing for the management of opioid use disorder (OUD). Evidence is lacking that assesses how split daily buprenorphine-naloxone affects OUD outcomes. This study aims to evaluate how the dosing frequency of SL buprenorphine-naloxone impacts therapy effectiveness when treating patients with OUD., Methods: This retrospective analysis included adult outpatients prescribed treatment with SL buprenorphine-naloxone for OUD between July 1, 2016, and March 1, 2020. The study excluded patients with sickle cell disease, recent methadone treatment, or pregnancy. We characterized study groups by dosing frequency, either once daily or split dosing. The study compared retention in treatment, medication adherence, adherence to treatment program, and hospital encounters between groups., Results: The study screened eight-hundred and seven patients, and included 250 patients newly prescribed SL buprenorphine-naloxone. Fifty-seven patients (22.8 %) were prescribed once daily dosing and 193 patients (77.2 %) were prescribed split daily dosing. The study found no significant differences noted in 12-month rates of treatment retention (52.6 % vs. 45.6 %, p = .35). These outcomes remained similar when assessed at three and six months. Within a year of buprenorphine-naloxone initiation, the study found no differences in the percentage of patients with hospitalizations (26.3 % vs. 38.3 %, p = .10), median number of hospitalizations (2 vs. 2), or proportion of days covered by a prescription ≥80 % (93.3 % vs. 92.0 %, p = .82)., Conclusions: In this study, patients receiving once daily buprenorphine-naloxone had similar treatment outcomes to patients receiving split dosing. Further controlled studies are necessary to evaluate which patients are more likely to benefit from split dosing., Competing Interests: Conflict of interest None., (Copyright © 2023 Elsevier Inc. All rights reserved.)
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- 2024
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8. Vehicle Detection and Attribution from a Multi-Sensor Dataset Using a Rule-Based Approach Combined with Data Fusion.
- Author
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Bowman LA, Narayanan RM, Kane TJ, Bradley ES, and Baran MS
- Abstract
Vehicle detection using data fusion techniques from overhead platforms (RGB/MSI imagery and LiDAR point clouds) with vector and shape data can be a powerful tool in a variety of fields, including, but not limited to, national security, disaster relief efforts, and traffic monitoring. Knowing the location and number of vehicles in a given area can provide insight into the surrounding activities and patterns of life, as well as support decision-making processes. While researchers have developed many approaches to tackling this problem, few have exploited the multi-data approach with a classical technique. In this paper, a primarily LiDAR-based method supported by RGB/MSI imagery and road network shapefiles has been developed to detect stationary vehicles. The addition of imagery and road networks, when available, offers an improved classification of points from LiDAR data and helps to reduce false positives. Furthermore, detected vehicles can be assigned various 3D, relational, and spectral attributes, as well as height profiles. This method was evaluated on the Houston, TX dataset provided by the IEEE 2018 GRSS Data Fusion Contest, which includes 1476 ground truth vehicles from LiDAR data. On this dataset, the algorithm achieved a 92% precision and 92% recall. It was also evaluated on the Vaihingen, Germany dataset provided by ISPRS, as well as data simulated using an image generation model called DIRSIG. Some known limitations of the algorithm include false positives caused by low vegetation and the inability to detect vehicles (1) in extremely close proximity with high precision and (2) from low-density point clouds.
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- 2023
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9. The Impact of Mortality Salience on Organ Donation Attitude, Beliefs, and Behavior.
- Author
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Reynolds-Tylus T, Harvell-Bowman LA, and Sarlo ME
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- Adolescent, Adult, Female, Humans, Male, Tissue Donors statistics & numerical data, Young Adult, Attitude to Death, Health Knowledge, Attitudes, Practice, Tissue Donors psychology, Tissue and Organ Procurement
- Abstract
The current study examines the relationship between mortality salience and attitude, beliefs, and behavior toward organ donor registration. Participants ( N = 484) completed a laboratory study in a 2 (mortality salience vs. control) x 2 (processing: distal vs. proximal) between-subjects factorial design. Dependent variables included death thought accessibility, attitude, information seeking, and organ donation beliefs (bodily integrity, ick, jinx, and medical mistrust). Differences between conditions were examined with independent samples t -tests and χ2 analyses. Participants in the mortality salience condition reported greater death thought accessibility than those in the control; however, no difference in attitude nor information seeking (non-donors only) was found between the two conditions. No difference in attitude nor information seeking (non-donors only) was observed between participants engaging in distal versus proximal defensive processing. Participants in the mortality salience condition reported higher medical mistrust and bodily integrity than those in the control condition; no difference between ick or jinx was found between the two conditions. Theoretical and practical implications are discussed.
- Published
- 2021
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10. Characterisation of Shigella Spa33 and Thermotoga FliM/N reveals a new model for C-ring assembly in T3SS.
- Author
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McDowell MA, Marcoux J, McVicker G, Johnson S, Fong YH, Stevens R, Bowman LA, Degiacomi MT, Yan J, Wise A, Friede ME, Benesch JL, Deane JE, Tang CM, Robinson CV, and Lea SM
- Subjects
- Amino Acid Sequence, Bacterial Proteins chemistry, Bacterial Proteins genetics, Crystallization, Crystallography, X-Ray, Flagella physiology, Mass Spectrometry, Models, Molecular, Protein Conformation, Protein Multimerization, Shigella flexneri physiology, Bacterial Proteins metabolism, Shigella flexneri genetics, Thermotoga maritima physiology, Type III Secretion Systems physiology
- Abstract
Flagellar type III secretion systems (T3SS) contain an essential cytoplasmic-ring (C-ring) largely composed of two proteins FliM and FliN, whereas an analogous substructure for the closely related non-flagellar (NF) T3SS has not been observed in situ. We show that the spa33 gene encoding the putative NF-T3SS C-ring component in Shigella flexneri is alternatively translated to produce both full-length (Spa33-FL) and a short variant (Spa33-C), with both required for secretion. They associate in a 1:2 complex (Spa33-FL/C2) that further oligomerises into elongated arrays in vitro. The structure of Spa33-C2 and identification of an unexpected intramolecular pseudodimer in Spa33-FL reveal a molecular model for their higher order assembly within NF-T3SS. Spa33-FL and Spa33-C are identified as functional counterparts of a FliM-FliN fusion and free FliN respectively. Furthermore, we show that Thermotoga maritima FliM and FliN form a 1:3 complex structurally equivalent to Spa33-FL/C2 , allowing us to propose a unified model for C-ring assembly by NF-T3SS and flagellar-T3SS., (© 2015 The Authors. Molecular Microbiology published by John Wiley & Sons Ltd.)
- Published
- 2016
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11. Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules.
- Author
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Boron I, Bustamante JP, Davidge KS, Singh S, Bowman LA, Tinajero-Trejo M, Carballal S, Radi R, Poole RK, Dikshit K, Estrin DA, Marti MA, and Boechi L
- Abstract
Mycobacterium tuberculosis, the causative agent of human tuberculosis, has two proteins belonging to the truncated hemoglobin (trHb) family. Mt-trHbN presents well-defined internal hydrophobic tunnels that allow O
2 and• NO to migrate easily from the solvent to the active site, whereas Mt-trHbO possesses tunnels interrupted by a few bulky residues, particularly a tryptophan at position G8. Differential ligand migration rates allow Mt-trHbN to detoxify• NO, a crucial step for pathogen survival once under attack by the immune system, much more efficiently than Mt-trHbO. In order to investigate the differences between these proteins, we performed experimental kinetic measurements,• NO decomposition, as well as molecular dynamics simulations of the wild type Mt-trHbN and two mutants, VG8F and VG8W. These mutations affect both the tunnels accessibility as well as the affinity of distal site water molecules, thus modifying the ligand access to the iron. We found that a single mutation allows Mt-trHbN to acquire ligand migration rates comparable to those observed for Mt-trHbO, confirming that ligand migration is regulated by the internal tunnel architecture as well as by water molecules stabilized in the active site., Competing Interests: Competing interests: No competing interests were disclosed.- Published
- 2015
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12. Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation.
- Author
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Scotti JS, Leung IK, Ge W, Bentley MA, Paps J, Kramer HB, Lee J, Aik W, Choi H, Paulsen SM, Bowman LA, Loik ND, Horita S, Ho CH, Kershaw NJ, Tang CM, Claridge TD, Preston GM, McDonough MA, and Schofield CJ
- Subjects
- Chlamydomonas reinhardtii metabolism, Humans, Hydroxylation, Hypoxia-Inducible Factor 1, alpha Subunit metabolism, Hypoxia-Inducible Factor-Proline Dioxygenases chemistry, Hypoxia-Inducible Factor-Proline Dioxygenases metabolism, Models, Molecular, Molecular Sequence Data, Peptide Elongation Factor Tu chemistry, Protein Structure, Secondary, Protein Structure, Tertiary, Substrate Specificity, Oxygen metabolism, Peptide Elongation Factor Tu metabolism, Proline metabolism, Pseudomonas putida metabolism
- Abstract
The roles of 2-oxoglutarate (2OG)-dependent prolyl-hydroxylases in eukaryotes include collagen stabilization, hypoxia sensing, and translational regulation. The hypoxia-inducible factor (HIF) sensing system is conserved in animals, but not in other organisms. However, bioinformatics imply that 2OG-dependent prolyl-hydroxylases (PHDs) homologous to those acting as sensing components for the HIF system in animals occur in prokaryotes. We report cellular, biochemical, and crystallographic analyses revealing that Pseudomonas prolyl-hydroxylase domain containing protein (PPHD) contain a 2OG oxygenase related in structure and function to the animal PHDs. A Pseudomonas aeruginosa PPHD knockout mutant displays impaired growth in the presence of iron chelators and increased production of the virulence factor pyocyanin. We identify elongation factor Tu (EF-Tu) as a PPHD substrate, which undergoes prolyl-4-hydroxylation on its switch I loop. A crystal structure of PPHD reveals striking similarity to human PHD2 and a Chlamydomonas reinhardtii prolyl-4-hydroxylase. A crystal structure of PPHD complexed with intact EF-Tu reveals that major conformational changes occur in both PPHD and EF-Tu, including a >20-Å movement of the EF-Tu switch I loop. Comparison of the PPHD structures with those of HIF and collagen PHDs reveals conservation in substrate recognition despite diverse biological roles and origins. The observed changes will be useful in designing new types of 2OG oxygenase inhibitors based on various conformational states, rather than active site iron chelators, which make up most reported 2OG oxygenase inhibitors. Structurally informed phylogenetic analyses suggest that the role of prolyl-hydroxylation in human hypoxia sensing has ancient origins.
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- 2014
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13. Nitrosothiols in bacterial pathogens and pathogenesis.
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Laver JR, McLean S, Bowman LA, Harrison LJ, Read RC, and Poole RK
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- Animals, Bacterial Infections metabolism, Bacterial Infections microbiology, Cysteine analogs & derivatives, Cysteine metabolism, Gene Expression Regulation, Bacterial, Gram-Negative Bacteria metabolism, Gram-Negative Bacteria physiology, Gram-Positive Bacteria metabolism, Gram-Positive Bacteria physiology, Host-Pathogen Interactions, Humans, Nitrosation, Oxidative Stress, Protein Processing, Post-Translational, Reactive Nitrogen Species metabolism, S-Nitrosoglutathione metabolism, Bacterial Proteins metabolism, S-Nitrosothiols metabolism
- Abstract
Significance: The formation and degradation of S-nitrosothiols (SNOs) are important mechanisms of post-translational protein modification and appear to be ubiquitous in biology. These processes play well-characterized roles in eukaryotic cells, including a variety of pathologies and in relation to chronic conditions. We know little of the roles of these processes in pathogenic and other bacteria., Recent Advances: It is clear, mostly from growth and transcriptional studies, that bacteria sense and respond to exogenous SNOs. These responses are phenotypically and mechanistically distinct from the responses of bacteria to nitric oxide (NO) and NO-releasing agents, as well as peroxynitrite. Small SNOs, such as S-nitrosoglutathione (GSNO), are accumulated by bacteria with the result that intracellular S-nitrosoproteins (the 'S-nitrosoproteome') are detectable. Recently, conditions for endogenous SNO formation in enterobacteria have been described., Critical Issues: The propensity of intracellular proteins to form SNOs is presumably constrained by the same rules of selectivity that have been discovered in eukaryotic systems, but is also influenced by uniquely bacterial NO detoxification systems, exemplified by the flavohemoglobin Hmp in enterobacteria and NO reductase of meningococci. Furthermore, the bacterial expression of such proteins impacts upon the formation of SNOs in mammalian hosts., Future Directions: The impairment during bacterial infections of specific SNO events in the mammalian host is of considerable interest in the context of proteins involved in innate immunity and intracellular signalling. In bacteria, numerous mechanisms of S-nitrosothiol degradation have been reported (e.g., GSNO reductase); others are thought to operate, based on consideration of their mammalian counterparts. The nitrosothiols of bacteria and particularly of pathogens warrant more intensive investigation.
- Published
- 2013
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14. The diversity of microbial responses to nitric oxide and agents of nitrosative stress close cousins but not identical twins.
- Author
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Bowman LA, McLean S, Poole RK, and Fukuto JM
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- Bacteria enzymology, Bacteria genetics, Bacterial Proteins genetics, Bacterial Proteins metabolism, Nitric Oxide metabolism, Nitric Oxide Synthase genetics, Nitric Oxide Synthase metabolism, Oxidative Stress drug effects, Reactive Nitrogen Species metabolism, Bacteria drug effects, Bacteria metabolism, Nitric Oxide pharmacology, Reactive Nitrogen Species pharmacology
- Abstract
Nitric oxide and related nitrogen species (reactive nitrogen species) now occupy a central position in contemporary medicine, physiology, biochemistry, and microbiology. In particular, NO plays important antimicrobial defenses in innate immunity but microbes have evolved intricate NO-sensing and defense mechanisms that are the subjects of a vast literature. Unfortunately, the burgeoning NO literature has not always been accompanied by an understanding of the intricacies and complexities of this radical and other reactive nitrogen species so that there exists confusion and vagueness about which one or more species exert the reported biological effects. The biological chemistry of NO and derived/related molecules is complex, due to multiple species that can be generated from NO in biological milieu and numerous possible reaction targets. Moreover, the fate and disposition of NO is always a function of its biological environment, which can vary significantly even within a single cell. In this review, we consider newer aspects of the literature but, most importantly, consider the underlying chemistry and draw attention to the distinctiveness of NO and its chemical cousins, nitrosonium (NO(+)), nitroxyl (NO(-), HNO), peroxynitrite (ONOO(-)), nitrite (NO(2)(-)), and nitrogen dioxide (NO(2)). All these species are reported to be generated in biological systems from initial formation of NO (from nitrite, NO synthases, or other sources) or its provision in biological experiments (typically from NO gas, S-nitrosothiols, or NO donor compounds). The major targets of NO and nitrosative damage (metal centers, thiols, and others) are reviewed and emphasis is given to newer "-omic" methods of unraveling the complex repercussions of NO and nitrogen oxide assaults. Microbial defense mechanisms, many of which are critical for pathogenicity, include the activities of hemoglobins that enzymically detoxify NO (to nitrate) and NO reductases and repair mechanisms (e.g., those that reverse S-nitrosothiol formation). Microbial resistance to these stresses is generally inducible and many diverse transcriptional regulators are involved-some that are secondary sensors (such as Fnr) and those that are "dedicated" (such as NorR, NsrR, NssR) in that their physiological function appears to be detecting primarily NO and then regulating expression of genes that encode enzymes with NO as a substrate. Although generally harmful, evidence is accumulating that NO may have beneficial effects, as in the case of the squid-Vibrio light-organ symbiosis, where NO serves as a signal, antioxidant, and specificity determinant. Progress in this area will require a thorough understanding not only of the biology but also of the underlying chemical principles., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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15. Integration of information and scientific literacy: promoting literacy in undergraduates.
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Porter JA, Wolbach KC, Purzycki CB, Bowman LA, Agbada E, and Mostrom AM
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- Biology education, Curriculum, Educational Measurement, Students, Information Literacy, Science education
- Abstract
The Association of College and Research Libraries recommends incorporating information literacy (IL) skills across university and college curricula, for the goal of developing information literate graduates. Congruent with this goal, the Departments of Biological Sciences and Information Science developed an integrated IL and scientific literacy (SL) exercise for use in a first-year biology course. Students were provided the opportunity to access, retrieve, analyze, and evaluate primary scientific literature. By the completion of this project, student responses improved concerning knowledge and relevance of IL and SL skills. This project exposes students to IL and SL early in their undergraduate experience, preparing them for future academic advancement.
- Published
- 2010
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16. Peroxynitrite toxicity in Escherichia coli K12 elicits expression of oxidative stress responses and protein nitration and nitrosylation.
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McLean S, Bowman LA, Sanguinetti G, Read RC, and Poole RK
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- Animals, Cell Division drug effects, Cell Survival drug effects, Escherichia coli K12 drug effects, Escherichia coli K12 genetics, Escherichia coli Proteins genetics, Escherichia coli Proteins metabolism, Gene Expression Profiling, Hydrogen Peroxide pharmacology, Mammals metabolism, NADPH Oxidases metabolism, Nitrates metabolism, Nitric Oxide Synthase metabolism, Oligonucleotide Array Sequence Analysis, Polymerase Chain Reaction, S-Nitrosothiols metabolism, Transcription, Genetic drug effects, Escherichia coli K12 physiology, Oxidative Stress drug effects, Peroxynitrous Acid toxicity
- Abstract
Peroxynitrite is formed in macrophages by the diffusion-limited reaction of superoxide and nitric oxide. This highly reactive species is thought to contribute to bacterial killing by interaction with diverse targets and nitration of protein tyrosines. This work presents for the first time a comprehensive analysis of transcriptional responses to peroxynitrite under tightly controlled chemostat growth conditions. Up-regulation of the cysteine biosynthesis pathway and an increase in S-nitrosothiol levels suggest S-nitrosylation to be a consequence of peroxynitrite exposure. Genes involved in the assembly/repair of iron-sulfur clusters also show enhanced transcription. Unexpectedly, arginine biosynthesis gene transcription levels were also elevated after treatment with peroxynitrite. Analysis of the negative regulator for these genes, ArgR, showed that post-translational nitration of tyrosine residues within this protein is responsible for its degradation in vitro. Further up-regulation was seen in oxidative stress response genes, including katG and ahpCF. However, genes known to be up-regulated by nitric oxide and nitrosating agents (e.g. hmp and norVW) were unaffected. Probabilistic modeling of the transcriptomic data identified five altered transcription factors in response to peroxynitrite exposure, including OxyR and ArgR. Hydrogen peroxide can be present as a contaminant in commercially available peroxynitrite preparations. Transcriptomic analysis of cells treated with hydrogen peroxide alone also revealed up-regulation of oxidative stress response genes but not of many other genes that are up-regulated by peroxynitrite. Thus, the cellular responses to peroxynitrite and hydrogen peroxide are distinct.
- Published
- 2010
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17. KatG from Salmonella typhimurium is a peroxynitritase.
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McLean S, Bowman LA, and Poole RK
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- Bacterial Proteins biosynthesis, Bacterial Proteins isolation & purification, Recombinant Proteins biosynthesis, Recombinant Proteins genetics, Recombinant Proteins isolation & purification, Recombinant Proteins metabolism, Rhodamines metabolism, Salmonella typhimurium genetics, Bacterial Proteins genetics, Bacterial Proteins metabolism, Peroxynitrous Acid metabolism, Salmonella typhimurium enzymology
- Abstract
Pathogenic bacteria elicit protective responses to oxidative and nitrosative stresses. Although such responses are generally distinct, it was recently reported in Mycobacterium tuberculosis that catalase-peroxidase (KatG), a classical defence against peroxides, also exhibits peroxynitritase activity. Here, the katG gene from Salmonella Typhimurium was cloned and protein purified and characterised. An increase in the rate of decomposition of peroxynitrite was observed for KatG from the enterobacterium with a second-order rate constant of 4.2x10(4)M(-1)s(-1) at pH 7.4, 25 degrees C. This enzyme was able to reduce dihydrorhodamine oxidation by peroxynitrite to approximately 83%. Given the peroxynitritase activity demonstrated here it is likely that KatG may play a wider role in the detoxification of oxidative stresses than previously thought., (Copyright 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.)
- Published
- 2010
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18. SCB1, a BURP-domain protein gene, from developing soybean seed coats.
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Batchelor AK, Boutilier K, Miller SS, Hattori J, Bowman LA, Hu M, Lantin S, Johnson DA, and Miki BL
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- Amino Acid Sequence, Base Sequence, Cloning, Molecular, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, In Situ Hybridization, Molecular Sequence Data, Restriction Mapping, Seeds cytology, Seeds growth & development, Sequence Homology, Amino Acid, Sequence Homology, Nucleic Acid, Soybean Proteins metabolism, Glycine max cytology, Glycine max growth & development, Seeds genetics, Soybean Proteins genetics, Glycine max genetics
- Abstract
We describe a gene, SCB1 (Seed Coat BURP-domain protein 1), that is expressed specifically within the soybean (Glycine max [L.] Merrill) seed coat early in its development. Northern blot analysis and mRNA in situ hybridization revealed novel patterns of gene expression during seed development. SCB1 mRNA accumulated first within the developing thick-walled parenchyma cells of the inner integument and later in the thick- and thin-walled parenchyma cells of the outer integument. This occurred prior to the period of seed coat maturation and seed filling and before either of the layers started to degrade. SCB1 may therefore play a role in the differentiation of the seed coat parenchyma cells. In addition, the protein product appears to be located within cell walls. The SCB1 gene codes for a new member of a class of modular proteins that possess a carboxy-terminal BURP domain and a variety of different repeated sequences. The sequence of the genomic clone revealed the insertion of a Tgm transposable element in the upstream promoter region but it is not certain whether it contributes to the tissue-specific pattern of SCB1 expression.
- Published
- 2002
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19. Temperature-sensitive strain of Cryptococcus neoformans producing hyphal elements in a feline nasal granuloma.
- Author
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Bemis DA, Krahwinkel DJ, Bowman LA, Mondon P, and Kwon-Chung KJ
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- Animals, Cats, Cryptococcosis microbiology, Cryptococcus neoformans growth & development, Female, Granuloma microbiology, Temperature, Cat Diseases microbiology, Cryptococcosis veterinary, Cryptococcus neoformans isolation & purification, Granuloma veterinary, Nasal Cavity pathology
- Abstract
We report the isolation of a temperature-sensitive, serotype A, mating type alpha strain of Cryptococcus neoformans from a case of nasal cryptococcosis in a cat. The strain grew extremely slowly at 35 degrees C and failed to grow at 37 degrees C in vitro. Histopathological sections of the infected tissue revealed yeast cells producing hyphae up to several hundred micrometers in length, in addition to numerous encapsulated yeast cells typical of C. neoformans. The cultures grown on yeast extract-peptone-glucose agar at 35 degrees C also produced some yeast cells with germ tube-like hyphal elements up to 100 microm in length.
- Published
- 2000
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20. Localization of peroxidase mRNAs in soybean seeds by in situ hybridization.
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Gijzen M, Miller SS, Bowman LA, Batchelor AK, Boutilier K, and Miki BL
- Subjects
- Blotting, Northern, DNA, Complementary chemistry, DNA, Complementary genetics, Gene Expression Regulation, Developmental, Gene Expression Regulation, Enzymologic, Gene Expression Regulation, Plant, In Situ Hybridization, Molecular Sequence Data, Peroxidases genetics, RNA, Messenger metabolism, RNA, Plant genetics, RNA, Plant metabolism, Seeds enzymology, Seeds growth & development, Sequence Alignment, Sequence Analysis, DNA, Glycine max enzymology, Tissue Distribution, Transcription, Genetic, Peroxidase genetics, RNA, Messenger genetics, Seeds genetics, Glycine max genetics
- Abstract
The soybean Ep gene encodes an anionic peroxidase enzyme that accumulates in large amounts in seed coat tissues. We have isolated a second peroxidase gene, Prx2, that is also highly expressed in developing seed coat tissues. Sequence analysis of Prx2 cDNA indicates that this transcript encodes a cationic peroxidase isozyme that is far removed from Ep in peroxidase phylogeny. To determine the expression patterns for these two peroxidases in developing seeds, the abundance and localization of the Ep and Prx2 transcripts were compared by in situ hybridization. Results show the expression of Ep begins in a small number of cells flanking the vascular bundle in the seed coat, spreads to encircle the seed, and then migrates to the hourglass cells as they develop. Expression of Prx2 occurs throughout development in all cell layers of the seed coat, and is also evident in the pericarp and embryo. Nonetheless, the Ep-encoded enzyme accounts for virtually all of the peroxidase activity detected in mature seed coats. The Prx2 enzyme is either insoluble in a catalytically inactive form, or is subject to degradation during seed maturation.
- Published
- 1999
- Full Text
- View/download PDF
21. Fluorine-18 Fluorodeoxyglucose Accumulation in Blastomyces dermatitidis-Associated Inflammation in a Dog.
- Author
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Matwichuk CL, Daniel GB, Bowman LA, Legendre AM, and Smith GT
- Abstract
Whole-body positron emission tomography (PET) imaging with fluorine-18 fluorodeoxyglucose (F-18 FDG) was performed in a dog with blastomycosis. Prior to PET scanning, blastomycotic lesions had been identified in both eyes, lungs, and tracheobronchial lymph nodes. Increased F-18 FDG uptake was present in these sites in addition to multiple organs without previous clinical evidence of disease. All sites of F-18 FDG uptake were confirmed histologically to be blastomycotic granulomas. F-18 FDG-PET scanning may be useful for defining the extent of fungal disease and detecting persistent foci of infection.
- Published
- 1999
- Full Text
- View/download PDF
22. Dynamic association of L-selectin with the lymphocyte cytoskeletal matrix.
- Author
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Evans SS, Schleider DM, Bowman LA, Francis ML, Kansas GS, and Black JD
- Subjects
- Antibodies, Monoclonal metabolism, Cross-Linking Reagents metabolism, Cytoplasm physiology, Cytoskeleton enzymology, Cytoskeleton physiology, Detergents, Fever immunology, Fever metabolism, Humans, Hyperthermia, Induced, L-Selectin chemistry, L-Selectin physiology, Lymphocytes enzymology, Mucins metabolism, Protein Binding immunology, Protein Serine-Threonine Kinases metabolism, Protein Structure, Tertiary, Solubility, Cytoskeleton metabolism, L-Selectin metabolism, Lymphocytes metabolism
- Abstract
L-selectin mediates lymphocyte extravasation into lymphoid tissues through binding to sialomucin-like receptors on the surface of high endothelial venules (HEV). This study examines the biochemical basis and regulation of interactions between L-selectin, an integral transmembrane protein, and the lymphocyte cytoskeleton. Using a detergent-based extraction procedure, constitutive associations between L-selectin and the insoluble cytoskeletal matrix could not be detected. However, engagement of the L-selectin lectin domain by Abs or by glycosylation-dependent cell adhesion molecule-1, an HEV-derived ligand for L-selectin, rapidly triggered redistribution of L-selectin to the detergent-insoluble cytoskeleton. L-selectin attachment to the cytoskeleton was not prevented by inhibitors of actin/microtubule polymerization (cytochalasin B, colchicine, or nocodozole) or serine/threonine and tyrosine kinase activity (staurosporine, calphostin C, or genistein), although L-selectin-mediated adhesion of human PBL was markedly suppressed by these agents. Exposure of human PBL or murine pre-B transfectants expressing full-length human L-selectin to fever-range hyperthermia also markedly increased L-selectin association with the cytoskeleton, directly correlating with enhanced L-selectin-mediated adhesion. In contrast, a deletion mutant of L-selectin lacking the COOH-terminal 11 amino acids failed to associate with the cytoskeletal matrix in response to Ab cross-linking or hyperthermia stimulation and did not support adhesion to HEV. These studies, when taken together with the previously demonstrated interaction between the L-selectin cytoplasmic domain and the cytoskeletal linker protein alpha-actinin, strongly implicate the actin-based cytoskeleton in dynamically controlling L-selectin adhesion.
- Published
- 1999
23. Symmetric cutaneous necrosis of the hind feet and multicentric follicular lymphoma in a cat.
- Author
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Ashley PF and Bowman LA
- Subjects
- Animals, Biopsy, Needle veterinary, Cat Diseases enzymology, Cats, Foot Dermatoses pathology, Hindlimb, Immunoenzyme Techniques veterinary, Liver enzymology, Liver pathology, Liver Neoplasms enzymology, Liver Neoplasms pathology, Liver Neoplasms veterinary, Lymph Nodes pathology, Lymphoma, Follicular enzymology, Lymphoma, Follicular pathology, Male, Necrosis, Paraneoplastic Syndromes pathology, Stomach pathology, Cat Diseases pathology, Foot Dermatoses veterinary, Lymphoma, Follicular veterinary, Paraneoplastic Syndromes veterinary, Skin pathology
- Abstract
A 7-year-old castrated male domestic shorthair cat was admitted to the veterinary teaching hospital for evaluation of symmetric necrosis of the skin of its hind feet and high liver enzyme activities. Lymphoma was diagnosed on cytologic examination of a fine needle aspirate of the liver. The owner declined treatment for the lymphoma. On postmortem histologic examination, lymphoma was found in the liver, stomach, and multiple lymph nodes. Immunohistochemical staining revealed the neoplasm to have a mixed B- and T-cell follicular arrangement, and a diagnosis of multicentric follicular lymphoma was made. The distal portion of the feet were necrotic, but a neoplastic infiltrate was not seen on histologic examination. After thrombosis and vasculitis were excluded as causes, the ischemic necrosis of the feet of the cat in this report was considered a paraneoplastic syndrome, as can be seen in people with lymphoma or other internal malignancies.
- Published
- 1999
24. Percutaneous absorption of vanilloids: in vivo and in vitro studies.
- Author
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Kasting GB, Francis WR, Bowman LA, and Kinnett GO
- Subjects
- Animals, Capsaicin pharmacokinetics, Humans, In Vitro Techniques, Male, Rats, Vanillic Acid pharmacokinetics, Capsaicin analogs & derivatives, Skin Absorption, Vanillic Acid analogs & derivatives
- Abstract
The percutaneous absorption of three highly lipophilic analogs of capsaicin--vanillylnonanamide (VN), olvanil, and NE-21610--was measured in vivo in the CD:VAF rat, and in vitro through excised CD: VAF and SkH:Fz rat skin and human cadaver skin. Absorption and skin metabolism were monitored by radiolabel techniques. The rank order of penetration in all species was VN > olvanil > NE-21610, in accordance with that expected from their physical properties. Rat skin was more permeable than human skin by factors ranging from 4 to 8 for VN, 10 to 20 for olvanil, and approximately 10 to 100 for NE-21610. All three compounds were extensively metabolized during passage through fresh SkH:Fz rat skin, with the primary route of degradation for at least two of the compounds involving hydrolysis of the amide bond (the metabolites of NE-21610 were not identified). For the in vitro studies a range of receptor solutions was employed to determine a set of conditions that best mimicked in vivo absorption. The results with phosphate-buffered saline containing a preservative and 1-6% polyoxyethylene-20 oleyl ether (Oleth-20) were in good agreement with in vivo results for all three compounds for periods up to 24 h post-dose; after this time, in vivo absorption rates declined but in vitro rates remained relatively constant. Buffered saline or saline containing 0.5% bovine serum albumin led to marked underestimates of in vivo penetration for olvanil and NE-21610, whereas a 1:1 ethanol: water solution led to gross overestimates of the in vivo absorption rates for all three compounds.
- Published
- 1997
- Full Text
- View/download PDF
25. Recovery of Aujeszky's disease virus recombinants from experimentally co-infected swine.
- Author
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Dangler CA, Henderson LM, Deaver RE, and Bowman LA
- Subjects
- Animals, DNA, Viral analysis, Genotype, Polymerase Chain Reaction, Pseudorabies Vaccines, Swine, Thymidine Kinase genetics, Viral Envelope Proteins genetics, Viral Vaccines genetics, Herpesvirus 1, Suid genetics, Herpesvirus 1, Suid isolation & purification, Pseudorabies virology, Recombination, Genetic, Swine Diseases virology
- Abstract
Tissue homogenates were obtained from swine experimentally co-infected with two vaccine strains of Aujeszky's disease virus (ADV). Viral isolates were derived by serial plaque purification directly from tissue homogenates, without an intervening step of isolation and amplification on cell cultures. Use of limiting dilutions and recovery of virus isolates as individual plaques minimized the likelihood of in vitro recombination serving as a confounding source of recombinant ADV. The tyhmidine kinase and glycoprotein X gene sequences were classified as wildtype or deleted, using a battery of polymerase chain reaction assays. On the basis of pairwise combinations of the allelic forms of the thymidine kinase and glycoprotein X genes, the isolates were characterized as recombinant and parental genotypes. The results substantiate the observation that ADV vaccine strains can form genetic recombinants in vivo after experimentally induced co-infection. A full description of this study is available (Am. J. Vet. Res. 54 (4) 540-545, 1993).
- Published
- 1994
26. Direct isolation and identification of recombinant pseudorabies virus strains from tissues of experimentally co-infected swine.
- Author
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Dangler CA, Henderson LM, Bowman LA, and Deaver RE
- Subjects
- Animals, Base Sequence, Genes, Viral, Genotype, Herpesvirus 1, Suid genetics, Molecular Sequence Data, Oligodeoxyribonucleotides, Polymerase Chain Reaction methods, Pseudorabies microbiology, Recombination, Genetic, Swine, Thymidine Kinase genetics, Viral Envelope Proteins genetics, Viral Plaque Assay, beta-Galactosidase genetics, Herpesvirus 1, Suid isolation & purification
- Abstract
Tissue homogenates were obtained from swine co-infected with 2 vaccine strains of pseudorabies virus (PRV). Viral isolates derived by serial plaque purification directly from tissue homogenates, without an intervening step of isolation and amplification on cell cultures, were characterized as recombinant and parental PRV genotypes on the basis of thymidine kinase and glycoprotein X gene combinations. Use of limiting dilutions and recovery of virus isolates as individual plaques minimized the likelihood of in vitro recombination serving as a confounding source of recombinant PRV. The thymidine kinase and glycoprotein X gene sequences were classified as wild-type or deleted, using a battery of polymerase chain reaction assays. Results substantiate the observation that PRV vaccine strains can form genetic recombinants in vivo after experimentally induced co-infection.
- Published
- 1993
27. Electrical analysis of fresh, excised human skin: a comparison with frozen skin.
- Author
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Kasting GB and Bowman LA
- Subjects
- Diffusion, Electrophysiology, Freezing, Humans, In Vitro Techniques, Iontophoresis, Male, Skin Absorption, Sodium pharmacokinetics, Sodium Radioisotopes, Skin Physiological Phenomena
- Abstract
Samples of human allograft skin prepared without freezing ("fresh skin") were found to have electrical and sodium ion transport properties which differed only slightly from those of skin which had been similarly treated but stored frozen ("frozen skin"). The fresh skin samples were less permeable to sodium ions during passive diffusion and less conductive than frozen skin at low current levels. They were more permselective for sodium versus chloride during constant-current iontophoresis and showed slightly more asymmetry in their current-voltage properties. Overall, the electrical behavior of the two tissues was similar enough to support the use of frozen tissue in iontophoresis studies. However, caution should be exercised when considering the use of frozen skin for applications, such as those based on electroosmosis, where the observed differences could have a major impact on the results.
- Published
- 1990
- Full Text
- View/download PDF
28. DC electrical properties of frozen, excised human skin.
- Author
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Kasting GB and Bowman LA
- Subjects
- Diffusion, Electrophysiology, Galvanic Skin Response, Humans, In Vitro Techniques, Skin Absorption, Sodium pharmacokinetics, Sodium Radioisotopes, Skin Physiological Phenomena
- Abstract
DC current-voltage relationships and sodium ion transport measurements for human allograft skin immersed in saline buffers have been determined using a four terminal potentiometric method and diffusion cells of our own design. About three-fourths of the skin samples were deemed suitable for study on the basis of their high resistivities and similar j-V characteristics. Most of these samples yielded sodium ion permeability coefficients less than or equal to those reported for human skin in vivo. The current-voltage relationship in these tissues was time dependent, highly nonlinear, and slightly asymmetric with respect to the sign of the applied potential. Skin resistance decreased as current or voltage increased. For current densities less than 15 microA/cm2 and exposure times of 10-20 min, this decrease was almost completely reversible; at higher current densities, both reversible and irreversible effects were observed. The overall dependence of current on voltage was nearly exponential and was satisfactorily described by an equation of the form j approximately sinh V. Diffusion potentials, sodium ion membrane transference numbers, and sodium ion flux enhancement factors during iontophoresis were measured for skin immersed both in normal saline solutions and in saline solutions of differing concentrations. The sign of the diffusion potentials and the value of the sodium ion transference number (0.51 in normal saline at pH 7.4) indicated a weak permselectivity of the skin for transport of sodium ion versus chloride. At a current density of 71 microA/cm2 and transmembrane potentials in the range of 1.1-1.6 V, the flux enhancement for sodium ion was three to five times greater than that predicted for an uncharged homogeneous membrane according to electrodiffusion theory. For transmembrane potentials less than 0.17 V, agreement of this theory with the data was better but still incomplete.
- Published
- 1990
- Full Text
- View/download PDF
29. Application of liquid chromatography with on-line radiochemical detection to metabolism studies on a novel class of analgesics.
- Author
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Wehmeyer KR, Kasting GB, Powell JH, Kuhlenbeck DL, Underwood RA, and Bowman LA
- Subjects
- Animals, Capsaicin metabolism, Chromatography, High Pressure Liquid, Intestinal Mucosa metabolism, Liver metabolism, Male, Perfusion, Radiochemistry, Rats, Rats, Inbred Strains, Analgesics metabolism, Anti-Inflammatory Agents, Non-Steroidal metabolism, Capsaicin analogs & derivatives
- Abstract
Vanilloids are a class of compounds structurally related to capsaicin, the pungent principle of hot peppers, which are under development as a novel class of analgesics. Vanilloids undergo extensive first-pass metabolism when dosed orally to rats and mice. These compounds, as well as capsaicin, would be anticipated to be susceptible to three major routes of metabolism: (omega, beta)-oxidation of the alkyl side chain, hydrolysis of the amide bond and conjugation of the phenolic group. Olvanil [N-(3-methoxy-4-hydroxybenzyl)oleamide], radiolabelled with either 14C at the benzylic carbon or 3H in the oleyl side chain, was studied in various in vitro, in situ and in vivo metabolism models to determine the major route(s) of intestinal and hepatic metabolism in rats for this new class of compounds. Models used in metabolism studies included isolated hydrolytic enzymes, cell-free intestinal and liver supernatants, hepatocytes, enterocytes, perfused intestine and whole animal studies. Reversed-phase liquid chromatography (LC) with on-line radiochemical detection was used to examine the metabolic profiles from the different models. The major metabolic route for olvanil in both the intestine and the liver was found to be hydrolysis of the amide bond. The benefits of selective 14C and 3H labels in conjunction with LC with on-line radiochemical detection are discussed.
- Published
- 1990
- Full Text
- View/download PDF
30. Suppression of oestrogen-induced LH surges by social subordination in talapoin monkeys.
- Author
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Bowman LA, Dilley SR, and Kerverne EB
- Subjects
- Aggression physiology, Animals, Castration, Drug Implants, Estradiol administration & dosage, Estradiol pharmacology, Female, Fertility, Humans, Luteinizing Hormone blood, Male, Prolactin blood, Sexual Behavior, Animal physiology, Estrogens pharmacology, Haplorhini physiology, Luteinizing Hormone physiology, Social Dominance
- Published
- 1978
- Full Text
- View/download PDF
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