7 results on '"Boukari I"'
Search Results
2. Strategies for improving expression of recombinant human chorionic gonadotropin in Chinese Hamster Ovary (CHO) cells.
- Author
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Boukari I, Rourou S, Bouzazi D, Essafi-Benkhadir K, and Kallel H
- Subjects
- CHO Cells, Animals, Humans, Cricetinae, Protein Sorting Signals genetics, Gene Expression, Transfection, Cricetulus, Recombinant Proteins genetics, Recombinant Proteins biosynthesis, Chorionic Gonadotropin genetics, Chorionic Gonadotropin biosynthesis, Chorionic Gonadotropin pharmacology
- Abstract
Optimizations of the gene expression cassette combined with the selection of an appropriate signal peptide are important factors that must be considered to enhance heterologous protein expression in Chinese Hamster Ovary (CHO) cells. In this study, we investigated the effectiveness of different signal peptides on the production of recombinant human chorionic gonadotropin (r-hCG) in CHO-K1 cells. Four optimized expression constructs containing four promising signal peptides were stably transfected into CHO-K1 cells. The generated CHO-K1 stable pool was then evaluated for r-hCG protein production. Interestingly, human serum albumin and human interleukin-2 signal peptides exhibited relatively greater extracellular secretion of the r-hCG with an average yield of (16.59 ± 0.02 μg/ml) and (14.80 ± 0.13 μg/ml) respectively compared to the native and murine IgGκ light chain signal peptides. The stably transfected CHO pool was further used as the cell substrate to develop an optimized upstream process followed by a downstream phase of the r-hCG. Finally, the biological activity of the purified r-hCG was assessed using in vitro bioassays. The combined data highlight that the choice of signal peptide can be imperative to ensure an optimal secretion of a recombinant protein in CHO cells. In addition, the stable pool technology was a viable approach for the production of biologically active r-hCG at a research scale with acceptable bioprocess performances and consistent product quality., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2025
- Full Text
- View/download PDF
3. Effect of lignin content on a GH11 endoxylanase acting on glucuronoarabinoxylan-lignin nanocomposites.
- Author
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Boukari I, Rémond C, O'Donohue M, and Chabbert B
- Subjects
- Microscopy, Electron, Transmission, Nanocomposites ultrastructure, Particle Size, Phenols chemistry, Polymerization, Surface Properties, Endo-1,4-beta Xylanases chemistry, Lignin chemistry, Nanocomposites chemistry, Xylans chemistry
- Abstract
The effects of lignin content on the activity and action pattern of GH11 endoxylanase from Thermobacillus xylanilyticus were investigated using in vitro reconstituted non-covalent glucuronoarabinoxylan-model lignin (GAX-DHP) nanocomposites. Four types of nanocomposites were prepared, each displaying different lignin contents. Variations in the DHP (model lignin) polymerization process were induced by increasing the coniferyl alcohol concentration. Examination of the morphology of the nanocomposites revealed globular particles enrobed in a matrix. The size of these particles increased in line with the lignin concentration. Physicochemical characterization of the in vitro reconstituted GAX-DHPs strongly suggested that increased particle size is directly related to the solubility and reactivity of coniferyl alcohol, as reflected by changes in the amount of β-O-4 linkages. Evaluation of the impact of the GH11 endoxylanase on the GAX-DHP nanocomposites revealed a negative correlation between the proportion and organization patterns of DHP in the nanocomposites and enzyme activity., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
4. Caldimonas hydrothermale sp. nov., a novel thermophilic bacterium isolated from Roman hot bath in south Tunisia.
- Author
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Bouraoui H, Boukari I, Touzel JP, O'Donohue M, and Manai M
- Subjects
- Aerobiosis, Base Composition, Comamonadaceae cytology, Comamonadaceae physiology, DNA, Bacterial chemistry, DNA, Bacterial genetics, Fatty Acids analysis, Genes, rRNA, Genotype, Hot Temperature, Molecular Sequence Data, Phylogeny, Temperature, Tunisia, Comamonadaceae classification, Comamonadaceae isolation & purification, Hot Springs microbiology
- Abstract
A polyphasic approach was used to characterize a bacterium, HAN-85(T), isolated from thermal water in natural thermal spring at Tozeur, an oasis in southwest Tunisia. The novel isolate was thermophilic, strictly aerobic and amylolytic bacterium, which stained Gram negative. Cells were short rods motile by means of a single polar flagellum. Their optimum temperature and pH required for growth were 55 degrees C and pH 7, respectively. Comparative 16S rRNA gene sequence analyses showed that strain HAN-85(T) belonged to the genus Caldimonas, with highest sequence similarity to the type strains Caldimonas manganoxidans and Caldimonas taiwanensis. DNA-DNA hybridization measurements revealed low DNA relatedness (35.2-44.5%) between the novel isolate and its closest relative, C. manganoxidans. The major cellular fatty acid components were 16:0, 17:0 cyclo and summed feature 3. The DNA G+C content was 68.3 mol%. Taken together, the results of DNA-DNA hybridization, fatty acids profile, physiological tests and biochemical analyses have allowed the genotypic and phenotypic differentiation of the isolate from currently recognized Caldimonas species. Therefore, we suggest that this isolate is a novel species within the genus Caldimonas and propose that it should be named Caldimonas hydrothermale sp. nov. The type strain is HAN-85(T) (=DSM 18497(T) =LMG 23755(T)).
- Published
- 2010
- Full Text
- View/download PDF
5. In vitro model assemblies to study the impact of lignin-carbohydrate interactions on the enzymatic conversion of xylan.
- Author
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Boukari I, Putaux JL, Cathala B, Barakat A, Saake B, Rémond C, O'Donohue M, and Chabbert B
- Subjects
- Bacterial Proteins metabolism, Carbohydrate Conformation, Models, Molecular, Carbohydrates chemistry, Endo-1,4-beta Xylanases metabolism, Lignin chemistry, Xylans metabolism
- Abstract
Endo-beta-1,4-xylanases (EC 3.2.1.8) are the main enzymes involved in the hydrolysis of xylans, the most abundant hemicelluloses in plant biomass. However, the development of efficient endoxylanases for use in biorefinery processes is currently hampered by insufficient knowledge regarding the impact of the cell wall network organization on the action of the enzyme at the supramolecular level. The action pattern of a GH11 endoxylanase from Thermobacillus xylanilyticus (Tx-xyl) was investigated by means of in vitro reconstituted model systems which can mimic certain cell wall structures. The action of Tx-xyl was evaluated on polymer assemblies displaying increasing complexity using delignified glucuronoarabinoxylan (GAX), then GAX-DHP model complexes obtained by oxidative polymerization of coniferyl alcohol into dehydrogenation polymers (DHP: lignin model compounds) in the presence of GAX. At a high concentration of GAX, interchain associations are formed leading to high molecular weight aggregates. These structures did not appear to affect the action of endoxylanase, which induces disaggregation of the self-aggregates along with polymer depolymerization. To mimic lignin-carbohydrate interactions, two different GAX-DHP nanocomposites were prepared and incubated with endoxylanase. In both cases, free GAX was hydrolyzed, while the GAX-DHP complexes appeared to be resistant. In the case of the noncovalently linked GAX-DHP(ZL) complexes, enzyme action favored a decrease in particle size, owing to the removal of their relatively exposed carbohydrate chains, whereas the complex supramolecular organization of the covalently linked GAX-DHP(ZT) complexes severely hampers the enzyme's access to carbohydrate. Overall, these results establish the negative impact of DHP on the endoxylanase action and provide new knowledge regarding the limitations of the enzyme action in the lignocellulose bioconversion processes.
- Published
- 2009
- Full Text
- View/download PDF
6. New insights into the role of the thumb-like loop in GH-11 xylanases.
- Author
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Paës G, Tran V, Takahashi M, Boukari I, and O'Donohue MJ
- Subjects
- Amino Acid Sequence, Amino Acid Substitution, Bacillus enzymology, Computer Simulation, Kinetics, Models, Molecular, Mutagenesis, Site-Directed, Protein Structure, Secondary, Thermodynamics, Valine chemistry, Valine genetics, Endo-1,4-beta Xylanases physiology
- Abstract
GH-11 xylanases are highly specific and possess a thumb-shaped loop, a unique structure among enzymes with a jelly-roll scaffold. To investigate this structure, in vitro mutagenesis was performed on a GH-11 xylanase (Tx-Xyl) from Thermobacillus xylanilyticus. Targets were the conserved amino acids Pro(114)-Ser(115)-Ile(116) that are located at the thumb's tip and Thr(121) and Tyr(111), linker residues that connect the thumb to the main enzyme scaffold. Site-saturation mutagenesis provided an active variant that possesses a new triplet (Pro(114)-Gly(115)-Cys(116)), not found in naturally occurring GH-11 xylanases. The k(cat) value for xylan hydrolysis catalysed by this mutant was increased by 20%. Re-positioning of the thumb through the deletion of the linker residues produced different effects. As predicted by in silico analyses, deletion of Thr(121) had drastic consequences on activity, whereas deletion of Tyr(111) only affected (4-fold decrease) k(cat). Finally, deletion mutagenesis was used to create a thumbless variant that was almost catalytically inactive. Fluorescence titration with xylotetraose and xylopentaose revealed that this thumb-deleted xylanase retained the ability to bind substrates. This binding was comparable to that of the wild-type enzyme. Additionally, unlike wild-type Tx-Xyl, the thumb-deleted xylanase efficiently bound cellotetraose, although no cellulose hydrolysing activity was detected. Overall, these data show that the thumb is a key determinant for substrate selection and support previous data that suggest that it plays a role in the catalytic process.
- Published
- 2007
- Full Text
- View/download PDF
7. [The part played by osseous dystocia in vesico-vaginal fistulas].
- Author
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Sylla S, Mensah A, Bitho MS, Boukari I, Touré K, Akpo C, and Tossou H
- Subjects
- Africa, Female, Humans, Pelvimetry, Pregnancy, Rural Population, Dystocia complications, Vesicovaginal Fistula etiology
- Published
- 1975
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