111 results on '"Bossdorf, O."'
Search Results
2. Data and code: Plants cultivated for ecosystem restoration can evolve towards a domestication syndrome
- Author
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Conrady, M., Lampei, C., Bossdorf, O., Hölzel, N., Michalski, Stefan, Durka, Walter ; orcid:0000-0002-6611-2246, Bucharova, A., Conrady, M., Lampei, C., Bossdorf, O., Hölzel, N., Michalski, Stefan, Durka, Walter ; orcid:0000-0002-6611-2246, and Bucharova, A.
- Published
- 2023
3. Plants cultivated for ecosystem restoration can evolve toward a domestication syndrome
- Author
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Conrady, M., Lampei, C., Bossdorf, O., Hölzel, N., Michalski, Stefan, Durka, Walter, Bucharova, A., Conrady, M., Lampei, C., Bossdorf, O., Hölzel, N., Michalski, Stefan, Durka, Walter, and Bucharova, A.
- Abstract
The UN Decade on Ecosystem Restoration calls for upscaling restoration efforts, but many terrestrial restoration projects are constrained by seed availability. To overcome these constraints, wild plants are increasingly propagated on farms to produce seeds for restoration projects. During on-farm propagation, the plants face non-natural conditions with different selection pressures, and they might evolve adaptations to cultivation that parallel those of agricultural crops, which could be detrimental to restoration success. To test this, we compared traits of 19 species grown from wild-collected seeds to those from their farm-propagated offspring of up to four cultivation generations, produced by two European seed growers, in a common garden experiment. We found that some plants rapidly evolved across cultivated generations towards increased size and reproduction, lower within-species variability, and more synchronized flowering. In one species, we found evolution towards less seed shattering. These trait changes are typical signs of the crop domestication syndrome, and our study demonstrates that it can also occur during cultivation of wild plants, within only few cultivated generations. However, there was large variability between cultivation lineages, and the observed effect sizes were generally rather moderate, which suggests that the detected evolutionary changes are unlikely to compromise farm-propagated seeds for ecosystem restoration. To mitigate the potential negative effects of unintended selection, we recommend to limit the maximum number of generations the plants can be cultivated without replenishing the seed stock from new wild collections.
- Published
- 2023
4. Recent evolution of flowering time across multiple European plant species correlates with changes in aridity
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Rauschkolb, R., Durka, Walter, Godefroid, S., Dixon, L., Bossdorf, O., Ensslin, A., Scheepens, J.F., Rauschkolb, R., Durka, Walter, Godefroid, S., Dixon, L., Bossdorf, O., Ensslin, A., and Scheepens, J.F.
- Abstract
Ongoing global warming and increasing drought frequencies impact plant populations and potentially drive rapid evolutionary adaptations. Historical comparisons, where plants grown from seeds collected in the past are compared to plants grown from freshly collected seeds from populations of the same sites, are a powerful method to investigate recent evolutionary changes across many taxa. We used 21-38 year-old seeds of 13 European plant species, stored in seed banks and originating from Mediterranean and temperate regions, together with recently collected seeds from the same sites for a greenhouse experiment to investigate shifts in flowering phenology as a potential result of adaptive evolution to changes in drought intensities over the last decades. We further used single nucleotide polymorphism (SNP) markers to quantify relatedness and levels of genetic variation. We found that, across species, current populations grew faster and advanced their flowering. These shifts were correlated with changes in aridity at the population origins, suggesting that increased drought induced evolution of earlier flowering, whereas decreased drought lead to weak or inverse shifts in flowering phenology. In five out of the 13 species, however, the SNP markers detected strong differences in genetic variation and relatedness between the past and current populations collected, indicating that other evolutionary processes may have contributed to changes in phenotypes. Our results suggest that changes in aridity may have influenced the evolutionary trajectories of many plant species in different regions of Europe, and that flowering phenology may be one of the key traits that is rapidly evolving.
- Published
- 2023
5. VCF files of common grassland plants from wild collected seeds of 19 common European grassland species with up to 4 consecutive generations grown in monoculture for seed production for restoration
- Author
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Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter ; orcid:0000-0002-6611-2246, Bucharova, A., Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter ; orcid:0000-0002-6611-2246, and Bucharova, A.
- Abstract
A growing number of restoration projects require large amounts of seeds. As harvesting natural populations cannot cover the demand, wild plants are often propagated in large-scale monocultures. There are concerns that this cultivation process may cause genetic drift and unintended selection, altering the genetic properties of the cultivated populations and reducing their genetic diversity. Such changes could reduce the pre-existing adaptation of restored populations and limit their adaptability to environmental change.We used single nucleotide polymorphism (SNP) markers and a pool-sequencing approach to test for genetic differentiation and changes in gene diversity during cultivation in 19 wild grassland species, comparing source populations and up to four consecutive cultivation generations. We linked the magnitudes of genetic changes to the species’ breeding systems and seed dormancy to understand the roles of these traits in genetic change.Cultivation changed the genetic composition across cultivated generations only moderately. The genetic differentiation resulting from cultivation was much lower than the natural genetic differentiation between different source regions. The propagated generations harbored even higher gene diversity than wild-collected seeds. Genetic change was stronger in self-compatible than self-incompatible species, probably due to increased outcrossing in monocultures.Synthesis and applications: Our study suggests that large-scale seed production maintains the genetic integrity of natural populations. Increased genetic diversity may even indicate increased adaptive potential of propagated seeds, which would make them especially suitable for ecological restoration. Yet, it remains to be tested whether these molecular patterns will be mirrored also by plant phenotypes. Further, we used seeds from Germany and Austria, where the seed production is regulated and certified, and we do not know yet whether other seed production systems perform equal
- Published
- 2022
6. VCF files of common grassland plants from wild collected seeds of 19 common European grassland species with up to 4 consecutive generations grown in monoculture for seed production for restoration [Dataset]
- Author
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Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter ; orcid:0000-0002-6611-2246, Bucharova, A., Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter ; orcid:0000-0002-6611-2246, and Bucharova, A.
- Abstract
A growing number of restoration projects require large amounts of seeds. As harvesting natural populations cannot cover the demand, wild plants are often propagated in large-scale monocultures. There are concerns that this cultivation process may cause genetic drift and unintended selection, altering the genetic properties of the cultivated populations and reducing their genetic diversity. Such changes could reduce the pre-existing adaptation of restored populations and limit their adaptability to environmental change.We used single nucleotide polymorphism (SNP) markers and a pool-sequencing approach to test for genetic differentiation and changes in gene diversity during cultivation in 19 wild grassland species, comparing source populations and up to four consecutive cultivation generations. We linked the magnitudes of genetic changes to the species’ breeding systems and seed dormancy to understand the roles of these traits in genetic change.Cultivation changed the genetic composition across cultivated generations only moderately. The genetic differentiation resulting from cultivation was much lower than the natural genetic differentiation between different source regions. The propagated generations harbored even higher gene diversity than wild-collected seeds. Genetic change was stronger in self-compatible than self-incompatible species, probably due to increased outcrossing in monocultures.Synthesis and applications: Our study suggests that large-scale seed production maintains the genetic integrity of natural populations. Increased genetic diversity may even indicate increased adaptive potential of propagated seeds, which would make them especially suitable for ecological restoration. Yet, it remains to be tested whether these molecular patterns will be mirrored also by plant phenotypes. Further, we used seeds from Germany and Austria, where the seed production is regulated and certified, and we do not know yet whether other seed production systems perform equal
- Published
- 2022
7. Evolution of plant drought strategies and herbivore tolerance after two decades of climate change
- Author
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Rauschkolb, R., Li, Z., Godefroid, S., Dixon, L., Durka, Walter, Májeková, M., Bossdorf, O., Ensslin, A., Scheepens, J.F., Rauschkolb, R., Li, Z., Godefroid, S., Dixon, L., Durka, Walter, Májeková, M., Bossdorf, O., Ensslin, A., and Scheepens, J.F.
- Abstract
Ongoing global warming, coupled with increased drought frequencies, together with other biotic drivers may have resulted in complex evolutionary adaptation. The resurrection approach, comparing ancestors raised from stored seeds with their contemporary descendants under common conditions, is a powerful method to test for recent evolution in plant populations. We used 21-26-year-old seeds of four European plant species – Matthiola tricuspidata, Plantago crassifolia, Clinopodium vulgare and Leontodon hispidus – stored in seed banks together with re-collected seeds from their wild populations. To test for evolutionary changes, we conducted a greenhouse experiment that quantified heritable changes in plant responses to drought and simulated insect herbivory. In three out of the four studied species, we found evidence that descendants evolved shorter life cycles through faster growth and flowering. Shifts in the osmotic potential and leaf dry matter content indicated that descendants also evolved increased drought tolerance. A comparison of QST vs. FST values, using ddRAD genotyping data, suggested that directional selection, and therefore adaptive evolution, was underlying some of the observed phenotypic changes. In summary, our study reveals evolutionary changes in plant populations over the last decades that are consistent with adaptation of drought escape and tolerance as well as herbivory avoidance.
- Published
- 2022
8. Evolution during seed production for ecological restoration? A molecular analysis of 19 species finds only minor genomic changes
- Author
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Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter, Bucharova, A., Conrady, M., Lampei, C., Bossdorf, O., Durka, Walter, and Bucharova, A.
- Abstract
A growing number of restoration projects require large amounts of seeds. As harvesting natural populations cannot cover the demand, wild plants are often propagated in large-scale monocultures. There are concerns that this cultivation process may cause genetic drift and unintended selection, altering the genetic properties of the cultivated populations and reducing their genetic diversity. Such changes could reduce the pre-existing adaptation of restored populations and limit their adaptability to environmental change.We used single nucleotide polymorphism (SNP) markers and a pool-sequencing approach to test for genetic differentiation and changes in gene diversity during cultivation in 19 wild grassland species, comparing source populations and up to four consecutive cultivation generations. We linked the magnitudes of genetic changes to the species’ breeding systems and seed dormancy to understand the roles of these traits in genetic change.Cultivation changed the genetic composition across cultivated generations only moderately. The genetic differentiation resulting from cultivation was much lower than the natural genetic differentiation between different source regions. The propagated generations harbored even higher gene diversity than wild-collected seeds. Genetic change was stronger in self-compatible than self-incompatible species, probably due to increased outcrossing in monocultures.Synthesis and applications: Our study suggests that large-scale seed production maintains the genetic integrity of natural populations. Increased genetic diversity may even indicate increased adaptive potential of propagated seeds, which would make them especially suitable for ecological restoration. Yet, it remains to be tested whether these molecular patterns will be mirrored also by plant phenotypes. Further, we used seeds from Germany and Austria, where the seed production is regulated and certified, and we do not know yet whether other seed production systems perform equal
- Published
- 2022
9. Historical comparisons show evolutionary changes in drought responses in European plant species after two decades of climate change
- Author
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Rauschkolb, R., Henres, L., Lou, C., Godefroid, S., Dixon, L., Durka, Walter, Bossdorf, O., Ensslin, A., Scheepens, J.F., Rauschkolb, R., Henres, L., Lou, C., Godefroid, S., Dixon, L., Durka, Walter, Bossdorf, O., Ensslin, A., and Scheepens, J.F.
- Abstract
Plants must continuously respond to environmental changes, and a timely question is whether and how populations respond to ongoing global warming and increased drought frequencies and intensities. Plants can either respond through migration or through phenotypic plasticity or their populations can adapt evolutionarily, which encompasses the evolution of trait means and of trait plasticity. One way to detect such evolutionary changes within plant populations is through historical comparisons where plants grown from seeds collected in the past (“ancestors”) are compared to freshly collected seeds from the same populations (“descendants”) in common garden experiments. We used 21- to 26-year-old seeds stored in seed banks for two multi-species experiments that investigated changes in phenotypic traits and their plasticity conferring drought tolerance in early life stages of European plant species. In the first experiment, we used seedlings of four Mediterranean species, ceased watering and recorded their day of mortality. In the second experiment, we studied phenotypic responses to drought in juvenile plants of nine species originating from temperate regions in Europe. In one of four species in the first experiment, descendants survived significantly longer without watering and were smaller than their ancestors. In the second experiment, descendant plants were generally taller under well-watered conditions but smaller under drought than their ancestors, thus showing stronger plasticity. Our historical comparisons suggest that some populations have likely evolved through changes in trait means and plasticity in ways consistent with adaptation to increased drought. Using seed bank material for historical comparisons has several weaknesses, such as unknown sampling protocols or invisible fractions. However, we show how accurately sampled and stored seed bank collections can be used similar to the resurrection approach for investigating rapid evolutionary processes in early
- Published
- 2021
10. Regionales Saatgut von Wiesenpflanzen: genetische Unterschiede, regionale Anpassung und Ökosystem-Effekte. Regional seed of grassland plants: genetic differences, regional adaptation and interaction with insects
- Author
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Durka, Walter, Bossdorf, O., Bucharova, A., Frenzel, Mark, Hermann, J.-M., Hölzel, N., Kollmann, J., Michalski, Stefan, Durka, Walter, Bossdorf, O., Bucharova, A., Frenzel, Mark, Hermann, J.-M., Hölzel, N., Kollmann, J., and Michalski, Stefan
- Abstract
Ab dem Jahr 2020 ist bei der Neuanlage von Grasland in der freien Landschaft die Verwendung gebietseigenen Saatguts („Regiosaatgut“) gesetzlich vorgeschrieben. Das Regiosaatgut-Konzept beruht auf der Annahme, dass Pflanzen unterschiedlicher Regionen genetisch verschieden und an die jeweiligen Umweltbedingungen angepasst sind. Wir überprüften dies an sieben Arten aus acht Regionen mit genetischen Markern und in Anzuchtexperimenten. Bei allen Arten waren die Pflanzen aus verschiedenen Regionen genetisch unterschiedlich, wobei Arrhenatherum elatius und Daucus carota schwache, Galium album, Hypochaeris radicata und Centaurea jacea intermediäre, Lychnis flos-cuculi und Knautia arvensis die stärkste Differenzierung zeigten. Bei vier Arten nahmen die Unterschiede mit der Entfernung der Herkünfte oder mit Klimaunterschieden der Regionen zu. Regionale Pflanzen hatten mehr Blüten und Biomasse als nicht regionale. Die Mehrzahl der Arten zeigte abnehmende Fitness und abweichendes Blühverhalten mit zunehmender Entfernung der Herkünfte oder zunehmenden Klimaunterschieden. Auch die Insekten in Blütenköpfen unterschieden sich. Somit sind viele Graslandarten regional angepasst. Die Eignung von Saatgut nimmt mit zunehmender Entfernung zwischen Einsatzort und Herkunftsregion ab. From the year 2020 on, the use of autochthonous seed (in German: Regiosaatgut) is mandatory for restoration of grassland in the open landscape. The Regiosaatgut system is based on the assumption that plant populations from different regions are genetically differentiated and adapted to their respective environments. We tested this with seven grassland species from eight regions using molecular markers and transplant experiments. In all species, regions were genetically differentiated, with Arrhenatherum elatius and Daucus carota exhibiting the weakest, Galium album, Hypochaeris radicata and Centaurea jacea intermediate, and Lychnis flos-cuculi and Knautia arvensis the strongest differentiation. In four species
- Published
- 2019
11. Rapid evolution in native plants cultivated for ecological restoration: not a general pattern
- Author
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Nagel, R., Durka, Walter, Bossdorf, O., Bucharova, A., Nagel, R., Durka, Walter, Bossdorf, O., and Bucharova, A.
- Abstract
The growing number of restoration projects worldwide increases the demand for seed material of native species. To meet this demand, seeds are often produced through large‐scale cultivation on specialised farms, using wild‐collected seeds as the original sources. However, during cultivation, plants experience novel environmental conditions compared to those in natural populations, and there is a danger that the plants in cultivation are subject to unintended selection and lose their adaptation to natural habitats. Although the propagation methods are usually designed to maintain as much natural genetic diversity as possible, the effectiveness of these measures have never been tested.We obtained seed of five common grassland species from one of the largest native seed producers in Germany. For each species, the seeds were from multiple generations of seed production. We used AFLP markers and a common garden experiment to test for genetic and phenotypic changes during cultivation of these plants.The molecular markers detected significant evolutionary changes in three out of the five species and we found significant phenotypic changes in two species. The only species that showed substantial genetic and phenotypic changes was the short‐lived and predominantly selfing Medicago lupulina, while in the other, mostly perennial and outcrossing species, the observed changes were mostly minor. Agricultural propagation of native seed material for restoration can cause evolutionary changes, at least in some species. We recommend caution, particularly in selfing and short‐lived species, where evolution may be more rapid and effects may thus be more severe.
- Published
- 2018
12. Mix and match: regional admixture provenancing strikes a balance among different seed-sourcing strategies for ecological restoration
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Bucharova, A., Bossdorf, O., Hölzel, N., Kollmann, J., Prasse, R., Durka, Walter, Bucharova, A., Bossdorf, O., Hölzel, N., Kollmann, J., Prasse, R., and Durka, Walter
- Abstract
One of the main questions in ecosystem restoration is where to obtain the seeds to re-establish plant communities. While the most commonly advocated approach is to use seeds from local sources, some experts argue against this because local populations may harbour little genetic variability for the restored populations to be able to adapt to and survive global change. Instead, they propose alternative strategies such as mixing seeds from various sources to increase genetic variability and adaptive potential, or using seeds from populations that have a similar climate as predicted for the target locality in the future. All these alternative seed-sourcing strategies have in common that they involve a transplanting of plant ecotypes, sometimes over large spatial scales. This is risky because plants from distant origins may be maladapted to the current local abiotic and biotic environment. In addition, introduction of non-local provenances will disrupt natural patterns of within-species biodiversity and will affect ecological networks, with unpredictable consequences. To balance the value of local adaptation with the need for future adaptation potential, we propose ‘regional admixture provenancing’ as a compromise strategy. Here seeds are sourced from multiple populations within the same region as the target locality and mixed prior to use. The mixing of seeds will increase the genetic diversity necessary for future adaptation, while restricting seed origins to a regional scale will maintain regional adaptation and reduce the risk of unintended effects on other biota. This approach is feasible in practice and has recently been implemented in Germany. We believe that it represents a compromise to reconcile opposing views on ecological restoration.
- Published
- 2018
13. Climate change will increase naturalization risk from garden plants in Europe
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Dullinger, I., Wessely, J., Bossdorf, O., Dawson, W., Essl, F., Gattringer, A., Klonner, G., Kreft, H., Kuttner, M., Moser, D., Pergl, J., Pysek, P., Thuiller, W., van Kleunen, M., Weigelt, P., Winter, M., and Dullinger, S.
- Abstract
Aim: Plant invasions often follow initial introduction with a considerable delay. The current non-native flora of a region may hence contain species that are not yet naturalized but may become so in the future, especially if climate change lifts limitations on species spread. In Europe, non-native garden plants represent a huge pool of potential future invaders. Here, we evaluate the naturalization risk from this species pool and how it may change under a warmer climate. Location Europe. Methods: We selected all species naturalized anywhere in the world but not yet in Europe from the set of non-native European garden plants. For this subset of 783 species, we used species distribution models to assess their potential European ranges under different scenarios of climate change. Moreover, we defined geographical hotspots of naturalization risk from those species by combining projections of climatic suitability with maps of the area available for ornamental plant cultivation. Results: Under current climate, 165 species would already find suitable conditions in > 5% of Europe. Although climate change substantially increases the potential range of many species, there are also some that are predicted to lose climatically suitable area under a changing climate, particularly species native to boreal and Mediterranean biomes. Overall, hotspots of naturalization risk defined by climatic suitability alone, or by a combination of climatic suitability and appropriate land cover, are projected to increase by up to 102% or 64%, respectively. Main conclusions: Our results suggest that the risk of naturalization of European garden plants will increase with warming climate, and thus it is very likely that the risk of negative impacts from invasion by these plants will also grow. It is therefore crucial to increase awareness of the possibility of biological invasions among horticulturalists, particularly in the face of a warming climate.
- Published
- 2017
14. Rapid evolution in native plants cultivated for ecological restoration: not a general pattern
- Author
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Nagel, R., primary, Durka, W., additional, Bossdorf, O., additional, and Bucharova, A., additional
- Published
- 2018
- Full Text
- View/download PDF
15. Are local plants the best for ecosystem restoration? It depends on how you analyze the data
- Author
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Bucharova, A., Durka, Walter, Hölzel, N., Kollmann, J., Michalski, Stefan, Bossdorf, O., Bucharova, A., Durka, Walter, Hölzel, N., Kollmann, J., Michalski, Stefan, and Bossdorf, O.
- Abstract
One of the key questions in ecosystem restoration is the choice of the seed material for restoring plant communities. The most common strategy is to use local seed sources, based on the argument that many plants are locally adapted and thus local seed sources should provide the best restoration success. However, the evidence for local adaptation is inconsistent, and some of these inconsistencies may be due to different experimental approaches that have been used to test for local adaptation. We illustrate how conclusions about local adaptation depend on the experimental design and in particular on the method of data analysis. We used data from a multispecies reciprocal transplant experiment and analyzed them in three different ways: (1) comparing local vs. foreign plants within species and sites, corresponding to tests of the “local is best” paradigm in ecological restoration, (2) comparing sympatric vs. allopatric populations across sites but within species, and (3) comparing sympatric and allopatric populations across multiple species. These approaches reflect different experimental designs: While a local vs. foreign comparison can be done even in small experiments with a single species and site, the other two approaches require a reciprocal transplant experiment with one or multiple species, respectively. The three different analyses led to contrasting results. While the local/foreign approach indicated lack of local adaptation or even maladaptation, the more general sympatric/allopatric approach rather suggested local adaptation, and the most general cross-species sympatric/allopatric test provided significant evidence for local adaptation. The analyses demonstrate how the design of experiments and methods of data analysis impact conclusions on the presence or absence of local adaptation. While small-scale, single-species experiments may be useful for identifying the appropriate seed material for a specific restoration project, general patterns can only be detec
- Published
- 2017
16. Ecological plant epigenetics: Evidence from model and non-model species, and the way forward
- Author
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Richards, C.L., Alonso, C., Becker, C., Bossdorf, O., Bucher, E., Colomé-Tatché, M., Durka, Walter, Engelhardt, J., Gaspar, B., Gogol-Döring, A., Grosse, I., van Gurp, T.P., Heer, K., Kronholm, I., Lampei, C., Latzel, V., Mirouze, M., Opgenoorth, L., Paun, O., Prohaska, S.J., Rensing, S.A., Stadler, P.F., Trucchi, E., Ullrich, K., Verhoeven, K.J.F., Richards, C.L., Alonso, C., Becker, C., Bossdorf, O., Bucher, E., Colomé-Tatché, M., Durka, Walter, Engelhardt, J., Gaspar, B., Gogol-Döring, A., Grosse, I., van Gurp, T.P., Heer, K., Kronholm, I., Lampei, C., Latzel, V., Mirouze, M., Opgenoorth, L., Paun, O., Prohaska, S.J., Rensing, S.A., Stadler, P.F., Trucchi, E., Ullrich, K., and Verhoeven, K.J.F.
- Abstract
Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute to a more mechanistic understanding but have limited ecological realism. Understanding the significance of epigenetics for plant ecology requires increased transfer of knowledge and methods from model species research to genomes of evolutionarily divergent species, and examination of responses to complex natural environments at a more mechanistic level. This requires transforming genomics tools specifically for studying non-model species, which is challenging given the large and often polyploid genomes of plants. Collaboration among molecular geneticists, ecologists and bioinformaticians promises to enhance our understanding of the mutual links between genome function and ecological processes.
- Published
- 2017
17. Evolutionary responses to land use in eight common grassland plants
- Author
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Völler, Eva, Bossdorf, O., Prati, D., Auge, Harald, Völler, Eva, Bossdorf, O., Prati, D., and Auge, Harald
- Abstract
Land-use change is an important component of global environmental change and a major driver of current declines in biodiversity. Although there is increasing evidence that species can evolve rapidly in response to anthropogenic environmental change, comprehensive studies of the evolutionary consequences of land use are still fairly scarce, in particular such that consider multiple species, study many populations, or that discriminate between different aspects of land use.Here, we studied genetic change of key phenotypic traits in response to land use in eight common grassland species across 137 grassland sites covering a broad range of land-use types (mowing and/or grazing, with or without fertilization) and intensities in three regions of Germany.A common garden study revealed significant genetic differentiation in response to land-use intensification within all of the investigated species. Among the studied land-use processes, mowing appeared to have the strongest effect on the differentiation of plant phenotypes, with flowering phenology as the most responsive trait. However, there was substantial variation among species in the magnitude, sometimes also the direction of the observed population differentiation.Synthesis. Our study demonstrates that evolutionary responses of grassland plants to land-use change are a common phenomenon and widespread across a broad range of different species. These evolutionary changes are likely to impact biotic interactions, as well as the structure and functioning of communities and ecosystems.
- Published
- 2017
18. Rapid evolution in native plants cultivated for ecological restoration: not a general pattern.
- Author
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Nagel, R., Durka, W., Bossdorf, O., Bucharova, A., and Pritchard, H.
- Subjects
CULTIVATED plants ,RESTORATION ecology ,NATIVE plants ,PLANT evolution ,SEED industry ,MEDICAGO - Abstract
The growing number of restoration projects worldwide increases the demand for seed material of native species. To meet this demand, seeds are often produced through large‐scale cultivation on specialised farms, using wild‐collected seeds as the original sources. However, during cultivation, plants experience novel environmental conditions compared to those in natural populations, and there is a danger that the plants in cultivation are subject to unintended selection and lose their adaptation to natural habitats. Although the propagation methods are usually designed to maintain as much natural genetic diversity as possible, the effectiveness of these measures have never been tested.We obtained seed of five common grassland species from one of the largest native seed producers in Germany. For each species, the seeds were from multiple generations of seed production. We used AFLP markers and a common garden experiment to test for genetic and phenotypic changes during cultivation of these plants.The molecular markers detected significant evolutionary changes in three out of the five species and we found significant phenotypic changes in two species. The only species that showed substantial genetic and phenotypic changes was the short‐lived and predominantly selfing Medicago lupulina, while in the other, mostly perennial and outcrossing species, the observed changes were mostly minor.Agricultural propagation of native seed material for restoration can cause evolutionary changes, at least in some species. We recommend caution, particularly in selfing and short‐lived species, where evolution may be more rapid and effects may thus be more severe. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
19. Plants adapted to warmer climate do not outperform regional plants during a natural heat wave
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Bucharova, A., Durka, Walter, Hermann, J.-M., Hölzel, N., Michalski, Stefan, Kollmann, J., Bossdorf, O., Bucharova, A., Durka, Walter, Hermann, J.-M., Hölzel, N., Michalski, Stefan, Kollmann, J., and Bossdorf, O.
- Abstract
With ongoing climate change, many plant species may not be able to adapt rapidly enough, and some conservation experts are therefore considering to translocate warm-adapted ecotypes to mitigate effects of climate warming. Although this strategy, called assisted migration, is intuitively plausible, most of the support comes from models, whereas experimental evidence is so far scarce. Here we present data on multiple ecotypes of six grassland species, which we grew in four common gardens in Germany during a natural heat wave, with temperatures 1.4–2.0°C higher than the long-term means. In each garden we compared the performance of regional ecotypes with plants from a locality with long-term summer temperatures similar to what the plants experienced during the summer heat wave. We found no difference in performance between regional and warm-adapted plants in four of the six species. In two species, regional ecotypes even outperformed warm-adapted plants, despite elevated temperatures, which suggests that translocating warm-adapted ecotypes may not only lack the desired effect of increased performance but may even have negative consequences. Even if adaptation to climate plays a role, other factors involved in local adaptation, such as biotic interactions, may override it. Based on our results, we cannot advocate assisted migration as a universal tool to enhance the performance of local plant populations and communities during climate change.
- Published
- 2016
20. Genetic differentiation and regional adaptation among seed origins used for grassland restoration: lessons from a multispecies transplant experiment
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Bucharova, A., Michalski, Stefan, Hermann, J.-M., Heveling, K., Durka, Walter, Hölzel, N., Kollmann, J., Bossdorf, O., Bucharova, A., Michalski, Stefan, Hermann, J.-M., Heveling, K., Durka, Walter, Hölzel, N., Kollmann, J., and Bossdorf, O.
- Abstract
One of the key questions in ecosystem restoration is the choice of seed material for restoring plant communities. More and more scientists and practitioners are currently advocating the use of regional seed sources, based on the argument that plants are often adapted to local or regional environmental conditions, and thus, regional seed sources should provide the best restoration success. However, there is still substantial debate about this approach, partly because of a lack of solid empirical data.We conducted a multispecies transplant experiment in which we compared the performance of eight seed origins of seven plant species frequently used in grassland restoration in four common gardens across Germany.We found that, on average, plants of regional origins produced 10% more inflorescences and 7% more biomass than those of foreign origins. There were substantial differences among species in the strength of these effects, but in the majority of the study species fitness decreased with increasing geographical distance of seed origins or with increasing climatic differences between plant origins and experimental sites.In addition to these effects on plant fitness, increasing geographical or climatic distances of origin were often also correlated with increasing differences in plant phenology. Since phenology is important for biotic interactions, especially with pollinators and seed predators, using foreign seed sources may have cascading effects on local ecosystems.Synthesis and applications. Genetic differentiation is widespread in grassland species and often shows the patterns of regional adaptation. Our study thus supports the use of regional seed sources in restoration. Moreover, using non-regional seed sources in grassland restoration may not only decrease the performance of plants, but it will likely also affect their biotic interactions.
- Published
- 2016
21. Genetic differentiation within multiple common grassland plants supports seed transfer zones for ecological restoration
- Author
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Durka, Walter, Michalski, Stefan, Berendzen, K.W., Bossdorf, O., Bucharova, A., Hermann, J.-M., Hölzel, N., Kollmann, J., Durka, Walter, Michalski, Stefan, Berendzen, K.W., Bossdorf, O., Bucharova, A., Hermann, J.-M., Hölzel, N., and Kollmann, J.
- Abstract
Ecological restoration of grasslands is increasingly based on regional seeds derived from predefined seed transfer zones. However, the degree and spatial pattern of genetic differentiation among provenances of different seed transfer zones is largely unknown.We assessed the genetic differentiation among eight out of 22 German seed transfer zones for seven common grassland species (Arrhenatherum elatius, Centaurea jacea, Daucus carota, Galium album, Hypochaeris radicata, Knautia arvensis and Lychnis flos-cuculi) using AFLP markers. We analysed genetic population structure with AMOVA and Bayesian cluster analysis and tested for isolation by distance and isolation by environment.In all of the investigated species, almost all pairs of provenances were genetically differentiated. Bayesian cluster analysis revealed species-specific numbers and spatial patterns of gene pools, with between two (Arrhenatherum) and eight clusters (Lychnis). Most investigated seed transfer zones represented a unique gene pool in the majority of the species.We found isolation by distance in four species, isolation by environment, driven by climatic seasonality, in three species, and a lack of both in three species. Thus, the observed genetic differentiation appears to be caused by both neutral and adaptive processes.Synthesis and applications. Our study shows that grassland plants are indeed strongly genetically differentiated across Germany supporting the strategy of seed transfer zones for ecological restoration. Although the predefined seed transfer zones are unlikely to match the exact genetic structure of many species, they serve their purpose by capturing a substantial amount of intraspecific genetic variation across species.
- Published
- 2016
22. Grassland management intensification weakens the associations among the diversities of multiple plant and animal taxa
- Author
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Manning, P., Gossner, M.M., Bossdorf, O., Allan, E., Zhang, Y.-Y., Prati, D., Blüthgen, N., Boch, S., Böhm, S., Börschig, C., Hölzel, N., Jung, K., Klaus, V.H., Klein, A.M., Kleinebecker, T., Krauss, J., Lange, M., Müller, J., Pašalić, E., Socher, S.A., Tschapka, M., Türke, Manfred, Weiner, C., Werner, M., Gockel, S., Hemp, A., Renner, S.C., Wells, K., Buscot, Francois, Kalko, E.K.V., Linsenmair, K.E., Weisser, W.W., Fischer, M., Manning, P., Gossner, M.M., Bossdorf, O., Allan, E., Zhang, Y.-Y., Prati, D., Blüthgen, N., Boch, S., Böhm, S., Börschig, C., Hölzel, N., Jung, K., Klaus, V.H., Klein, A.M., Kleinebecker, T., Krauss, J., Lange, M., Müller, J., Pašalić, E., Socher, S.A., Tschapka, M., Türke, Manfred, Weiner, C., Werner, M., Gockel, S., Hemp, A., Renner, S.C., Wells, K., Buscot, Francois, Kalko, E.K.V., Linsenmair, K.E., Weisser, W.W., and Fischer, M.
- Abstract
Land-use intensification is a key driver of biodiversity change. However, little is known about how it alters relationships between the diversities of different taxonomic groups, which are often correlated due to shared environmental drivers and trophic interactions. Using data from 150 grassland sites, we examined how land-use intensification (increased fertilization, higher livestock densities, and increased mowing frequency) altered correlations between the species richness of 15 plant, invertebrate, and vertebrate taxa. We found that 54% of pairwise correlations between taxonomic groups were significant and positive among all grasslands, while only one was negative. Higher land-use intensity substantially weakened these correlations (35% decrease in r and 43% fewer significant pairwise correlations at high intensity), a pattern which may emerge as a result of biodiversity declines and the breakdown of specialized relationships in these conditions. Nevertheless, some groups (Coleoptera, Heteroptera, Hymenoptera and Orthoptera) were consistently correlated with multidiversity, an aggregate measure of total biodiversity comprised of the standardized diversities of multiple taxa, at both high and low land-use intensity. The form of intensification was also important; increased fertilization and mowing frequency typically weakened plant–plant and plant–primary consumer correlations, whereas grazing intensification did not. This may reflect decreased habitat heterogeneity under mowing and fertilization and increased habitat heterogeneity under grazing. While these results urge caution in using certain taxonomic groups to monitor impacts of agricultural management on biodiversity, they also suggest that the diversities of some groups are reasonably robust indicators of total biodiversity across a range of conditions.Read More: http://www.esajournals.org/doi/10.1890/14-1307.1
- Published
- 2015
23. Evolutionary significance of epigenetic variation
- Author
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Richards, C.L., Verhoeven, K.J.F., Bossdorf, O., Wendel, J.F., Greilhuber, J., Dolezel, J., Leitch, I.J., and Terrestrische Ecologie (TE)
- Subjects
0106 biological sciences ,Genetics ,0303 health sciences ,Natural selection ,Evolutionary significance ,Phenotypic trait ,Biology ,010603 evolutionary biology ,01 natural sciences ,Genome ,03 medical and health sciences ,Molecular level ,Variation (linguistics) ,Evolutionary biology ,Evolutionary ecology ,Epigenetics ,030304 developmental biology - Abstract
Several chapters in this volume demonstrate how epigenetic work at the molecular level over the last few decades has revolutionized our understanding of genome function and developmental biology. However, epigenetic processes not only further our understanding of variation and regulation at the genomic and cellular levels, they also challenge our understanding of heritable phenotypic variation at the level of whole organisms and even the process of evolution by natural selection (Jablonka and Lamb 1989, 1995; Danchin et al. 2011). Although many of the epigenetic mechanisms involved in differential gene expression are reset each generation, some epigenetic marks are faithfully transmitted across generations (Jablonka and Raz 2009; Verhoeven et al. 2010a). In addition, we now know that natural variation exists not only at the DNA sequence level but also the epigenetic level (e.g., Vaughn et al. 2007; Herrera and Bazaga 2010). This may be particularly common in plants, and several studies suggest that epigenetic variation alone can cause significant heritable variation in phenotypic traits (e.g., Cubas et al. 1999; Johannes et al. 2009; Scoville et al. 2011). Because of these observations, there is currently increasing interest in understanding the role of epigenetic processes in ecology and evolution (e.g., Richards 2006, 2011; Bossdorf et al. 2008; Johannes et al. 2008; Richards et al. 2010a).
- Published
- 2012
24. Understanding natural epigenetic variation
- Author
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Richards, C.L., Bossdorf, O., Verhoeven, K.J.F., and Terrestrial Ecology (TE)
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evolution ,opinion ,inheritance ,Laboratory of Nematology ,PE&RC ,Laboratorium voor Nematologie - Abstract
no abstract
- Published
- 2010
25. Small-scale patterns in snowmelt timing affect gene flow and the distribution of genetic diversity in the alpine dwarf shrub Salix herbacea
- Author
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Cortes, Andres J., Waeber, S., Lexer, C., Sedlacek, J., Wheeler, J. A., van Kleunen, M., Bossdorf, O., Hoch, G., Rixen, C., Wipf, S., Karrenberg, Sophie, Cortes, Andres J., Waeber, S., Lexer, C., Sedlacek, J., Wheeler, J. A., van Kleunen, M., Bossdorf, O., Hoch, G., Rixen, C., Wipf, S., and Karrenberg, Sophie
- Abstract
Current threats to biodiversity, such as climate change, are thought to alter the within-species genetic diversity among microhabitats in highly heterogeneous alpine environments. Assessing the spatial organization and dynamics of genetic diversity within species can help to predict the responses of organisms to environmental change. In this study, we evaluated whether small-scale heterogeneity in snowmelt timing restricts gene flow between microhabitats in the common long-lived dwarf shrub Salix herbacea L. We surveyed 273 genets across 12 early-and late-snowmelt sites (that is, ridges and snowbeds) in the Swiss Alps for phenological variation over 2 years and for genetic variation using seven SSR markers. Phenological differentiation triggered by differences in snowmelt timing did not correlate with genetic differentiation between microhabitats. On the contrary, extensive gene flow appeared to occur between microhabitats and slightly less extensively among adjacent mountains. However, ridges exhibited significantly lower levels of genetic diversity than snowbeds, and patterns of effective population size (Ne) and migration (Nem) between microhabitats were strongly asymmetric, with ridges acting as sources and snowbeds as sinks. As no recent genetic bottlenecks were detected in the studied sites, this asymmetry is likely to reflect current metapopulation dynamics of the species dominated by gene flow via seeds rather than ancient re-colonization after the last glacial period. Overall, our results suggest that seed dispersal prevents snowmelt-driven genetic isolation, and snowbeds act as sinks of genetic diversity. We discuss the consequences of such small-scale variation in gene flow and diversity levels for population responses to climate change.
- Published
- 2014
- Full Text
- View/download PDF
26. Small-scale patterns in snowmelt timing affect gene flow and the distribution of genetic diversity in the alpine dwarf shrub Salix herbacea
- Author
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Cortés, A J, primary, Waeber, S, additional, Lexer, C, additional, Sedlacek, J, additional, Wheeler, J A, additional, van Kleunen, M, additional, Bossdorf, O, additional, Hoch, G, additional, Rixen, C, additional, Wipf, S, additional, and Karrenberg, S, additional
- Published
- 2014
- Full Text
- View/download PDF
27. Interannual variation in land-use intensity enhances grassland multidiversity
- Author
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Allan, E., Bossdorf, O., Dormann, C.F., Prati, D., Gossner, M.M., Tscharntke, T., Blüthgen, N., Bellach, M., Birkhofer, K., Boch, S., Böhm, S., Börschig, C., Chatzinotas, Antonis, Christ, S., Daniel, R., Diekötter, T., Fischer, C., Friedl, T., Glaser, Karin, Hallmann, C., Hodac, L., Hölzel, N., Jung, K., Klein, A.M., Klaus, V.H., Kleinebecker, T., Krauss, J., Lange, M., Morris, E.K., Müller, J., Nacke, H., Pašalić, E., Rillig, M.C., Rothenwöhrer, C., Schall, P., Scherber, C., Schulze, W., Socher, S.A., Steckel, J., Steffan-Dewenter, I., Türke, Manfred, Weiner, C.N., Werner, M., Westphal, C., Wolters, V., Wubet, Tesfaye, Gockel, S., Gorke, M., Hemp, A., Renner, S.C., Schöning, I., Pfeiffer, S., König-Ries, B., Buscot, Francois, Linsenmair, K.E., Schulze, E.-D., Weisser, W.W., Fischer, M., Allan, E., Bossdorf, O., Dormann, C.F., Prati, D., Gossner, M.M., Tscharntke, T., Blüthgen, N., Bellach, M., Birkhofer, K., Boch, S., Böhm, S., Börschig, C., Chatzinotas, Antonis, Christ, S., Daniel, R., Diekötter, T., Fischer, C., Friedl, T., Glaser, Karin, Hallmann, C., Hodac, L., Hölzel, N., Jung, K., Klein, A.M., Klaus, V.H., Kleinebecker, T., Krauss, J., Lange, M., Morris, E.K., Müller, J., Nacke, H., Pašalić, E., Rillig, M.C., Rothenwöhrer, C., Schall, P., Scherber, C., Schulze, W., Socher, S.A., Steckel, J., Steffan-Dewenter, I., Türke, Manfred, Weiner, C.N., Werner, M., Westphal, C., Wolters, V., Wubet, Tesfaye, Gockel, S., Gorke, M., Hemp, A., Renner, S.C., Schöning, I., Pfeiffer, S., König-Ries, B., Buscot, Francois, Linsenmair, K.E., Schulze, E.-D., Weisser, W.W., and Fischer, M.
- Abstract
Although temporal heterogeneity is a well-accepted driver of biodiversity, effects of interannual variation in land-use intensity (LUI) have not been addressed yet. Additionally, responses to land use can differ greatly among different organisms; therefore, overall effects of land-use on total local biodiversity are hardly known. To test for effects of LUI (quantified as the combined intensity of fertilization, grazing, and mowing) and interannual variation in LUI (SD in LUI across time), we introduce a unique measure of whole-ecosystem biodiversity, multidiversity. This synthesizes individual diversity measures across up to 49 taxonomic groups of plants, animals, fungi, and bacteria from 150 grasslands. Multidiversity declined with increasing LUI among grasslands, particularly for rarer species and aboveground organisms, whereas common species and belowground groups were less sensitive. However, a high level of interannual variation in LUI increased overall multidiversity at low LUI and was even more beneficial for rarer species because it slowed the rate at which the multidiversity of rare species declined with increasing LUI. In more intensively managed grasslands, the diversity of rarer species was, on average, 18% of the maximum diversity across all grasslands when LUI was static over time but increased to 31% of the maximum when LUI changed maximally over time. In addition to decreasing overall LUI, we suggest varying LUI across years as a complementary strategy to promote biodiversity conservation.
- Published
- 2013
28. Citizen science reveals unexpected continental-scale evolutionary change in a model organism
- Author
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Silvertown, J., Cook, L., Cameron, R., Dodd, M., McConway, K., Worthington, J., Skelton, P., Anton, Christian, Bossdorf, O., Baur, B., Schilthuizen, M., Fontaine, B., Sattmann, H., Bertorelle, G., Correia, M., Oliveira, C., Pokryszko, B., Ozgo, M., Stalazs, M., Gill, E., Rammul, Ü., Sólymos, P., Féher, Z., Juan, X., Silvertown, J., Cook, L., Cameron, R., Dodd, M., McConway, K., Worthington, J., Skelton, P., Anton, Christian, Bossdorf, O., Baur, B., Schilthuizen, M., Fontaine, B., Sattmann, H., Bertorelle, G., Correia, M., Oliveira, C., Pokryszko, B., Ozgo, M., Stalazs, M., Gill, E., Rammul, Ü., Sólymos, P., Féher, Z., and Juan, X.
- Abstract
Organisms provide some of the most sensitive indicators of climate change and evolutionary responses are becoming apparent in species with short generation times. Large datasets on genetic polymorphism that can provide an historical benchmark against which to test for recent evolutionary responses are very rare, but an exception is found in the brown-lipped banded snail (Cepaea nemoralis). This species is sensitive to its thermal environment and exhibits several polymorphisms of shell colour and banding pattern affecting shell albedo in the majority of populations within its native range in Europe. We tested for evolutionary changes in shell albedo that might have been driven by the warming of the climate in Europe over the last half century by compiling an historical dataset for 6,515 native populations of C. nemoralis and comparing this with new data on nearly 3,000 populations. The new data were sampled mainly in 2009 through the Evolution MegaLab, a citizen science project that engaged thousands of volunteers in 15 countries throughout Europe in the biggest such exercise ever undertaken. A known geographic cline in the frequency of the colour phenotype with the highest albedo (yellow) was shown to have persisted and a difference in colour frequency between woodland and more open habitats was confirmed, but there was no general increase in the frequency of yellow shells. This may have been because snails adapted to a warming climate through behavioural thermoregulation. By contrast, we detected an unexpected decrease in the frequency of Unbanded shells and an increase in the Mid-banded morph. Neither of these evolutionary changes appears to be a direct response to climate change, indicating that the influence of other selective agents, possibly related to changing predation pressure and habitat change with effects on micro-climate.
- Published
- 2011
29. Implementing large-scale and long-term functional biodiversity research: the biodiversity exploratories
- Author
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Fischer, M., Bossdorf, O., Gockel, S., Hänsel, F., Hemp, A., Hessenmöller, D., Korte, G., Nieschulze, J., Pfeiffer, S., Prati, D., Renner, S., Schöning, I., Schumacher, U., Wells, K., Buscot, Francois, Kalko, E.K.V., Linsenmair, K.E., Schulze, E.-D., Weisser, W., Fischer, M., Bossdorf, O., Gockel, S., Hänsel, F., Hemp, A., Hessenmöller, D., Korte, G., Nieschulze, J., Pfeiffer, S., Prati, D., Renner, S., Schöning, I., Schumacher, U., Wells, K., Buscot, Francois, Kalko, E.K.V., Linsenmair, K.E., Schulze, E.-D., and Weisser, W.
- Abstract
Functional biodiversity research explores drivers and functional consequences of biodiversity changes. Land use change is a major driver of changes of biodiversity and of biogeochemical and biological ecosystem processes and services. However, land use effects on genetic and species diversity are well documented only for a few taxa and trophic networks. We hardly know how different components of biodiversity and their responses to land use change are interrelated and very little about the simultaneous, and interacting, effects of land use on multiple ecosystem processes and services. Moreover, we do not know to what extent land use effects on ecosystem processes and services are mediated by biodiversity change. Thus, overall goals are on the one hand to understand the effects of land use on biodiversity, and on the other to understand the modifying role of biodiversity change for land-use effects on ecosystem processes, including biogeochemical cycles. To comprehensively address these important questions, we recently established a new large-scale and long-term project for functional biodiversity, the Biodiversity Exploratories (). They comprise a hierarchical set of standardized field plots in three different regions of Germany covering manifold management types and intensities in grasslands and forests. They serve as a joint research platform for currently 40 projects involving over 300 people studying various aspects of the relationships between land use, biodiversity and ecosystem processes through monitoring, comparative observation and experiments. We introduce guiding questions, concept and design of the Biodiversity Exploratories - including main aspects of selection and implementation of field plots and project structure - and we discuss the significance of this approach for further functional biodiversity research. This includes the crucial relevance of a common study design encompassing variation in both drivers and outcomes of biodiversity change and ecos
- Published
- 2010
30. Isolation and characterization of microsatellite loci in the invasive Alliaria petiolata (Brassicaceae).
- Author
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Durka, A.G., Bossdorf, O, Gautschi, B., Durka, A.G., Bossdorf, O, and Gautschi, B.
- Published
- 2004
31. Invasive knotweed affects native plants through allelopathy
- Author
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Murrell, C., primary, Gerber, E., additional, Krebs, C., additional, Parepa, M., additional, Schaffner, U., additional, and Bossdorf, O., additional
- Published
- 2010
- Full Text
- View/download PDF
32. Isolation and characterization of microsatellite loci in the invasive Alliaria petiolata (Brassicaceae)
- Author
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Durka, W., primary, Bossdorf, O., additional, and Gautschi, B., additional
- Published
- 2004
- Full Text
- View/download PDF
33. Epigenetic variation in plant responses to defence hormones
- Author
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Latzel, V, Zhang, Y, Moritz, KK, Fischer, M, and Bossdorf, O
- Subjects
2. Zero hunger
34. Small-scale patterns in snowmelt timing affect gene flow and the distribution of genetic diversity in the alpine dwarf shrub Salix herbacea
- Author
-
Cortés, Andres J., Waeber, Stephan, Lexer, Christian, Sedlacek, J., Wheeler, J. A., Kleunen, Mark van, Bossdorf, O., Hoch, G., Rixen, C., Wipf, S ., Karrenberg, S., Cortés, Andres J., Waeber, Stephan, Lexer, Christian, Sedlacek, J., Wheeler, J. A., Kleunen, Mark van, Bossdorf, O., Hoch, G., Rixen, C., Wipf, S ., and Karrenberg, S.
- Abstract
Current threats to biodiversity, such as climate change, are thought to alter the within-species genetic diversity among microhabitats in highly heterogeneous alpine environments. Assessing the spatial organization and dynamics of genetic diversity within species can help to predict the responses of organisms to environmental change. In this study, we evaluated whether small-scale heterogeneity in snowmelt timing restricts gene flow between microhabitats in the common long-lived dwarf shrub Salix herbacea L. We surveyed 273 genets across 12 early- and late-snowmelt sites (that is, ridges and snowbeds) in the Swiss Alps for phenological variation over 2 years and for genetic variation using seven SSR markers. Phenological differentiation triggered by differences in snowmelt timing did not correlate with genetic differentiation between microhabitats. On the contrary, extensive gene flow appeared to occur between microhabitats and slightly less extensively among adjacent mountains. However, ridges exhibited significantly lower levels of genetic diversity than snowbeds, and patterns of effective population size (Ne) and migration (Nem) between microhabitats were strongly asymmetric, with ridges acting as sources and snowbeds as sinks. As no recent genetic bottlenecks were detected in the studied sites, this asymmetry is likely to reflect current meta-population dynamics of the species dominated by gene flow via seeds rather than ancient re-colonization after the last glacial period. Overall, our results suggest that seed dispersal prevents snowmelt-driven genetic isolation, and snowbeds act as sinks of genetic diversity. We discuss the consequences of such small-scale variation in gene flow and diversity levels for population responses to climate change.
35. Spatial patterns of plant association in grazed and ungrazed shrublands in the semi-arid Karoo, South Africa
- Author
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Bossdorf, O., Schumacher, J., and Schurr, F.
- Subjects
BOTANY ,COMMUNITIES ,GRAZING - Abstract
The investigation of vegetation pattern and plant association by spatial statistics has become increasingly popular among plant ecologists. Recently, Individual-centered analysis (ICA) has been introduced as a new tool for analysis of multi-species co-occurrence patterns. Wetested this new technique by applying it to spatial data from grazedand ungrazed shrub communities in the semi-arid Great Karoo, South Africa. There were substantial but complex and scale-dependent differences in pattern between grazed and ungrazed vegetation. Unpalatable species that increase in abundance in grazed vegetation possibly play a key role in the change of vegetation pattern. At small scales we found indications of aggregation (<30 cm) at the ungrazed, but of repulsion (30 - 40 cm) at the grazed site. An additional non-random pattern at 60 - 170 cm at the grazed site was probably due to the clumped distributions of some species on broader scales. We show that the interpretability of ICA results is improved when the actual observed andexpected frequencies of species combinations are added to the program output. The main strength of ICA is that it has the potential to detect association patterns that involve more than two species. [ABSTRACT FROM AUTHOR]
- Published
- 2000
- Full Text
- View/download PDF
36. Effects of climate change and horticultural use on the spread of naturalized alien garden plants in Europe
- Author
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Klonner, Günther, Wessely, Johannes, Gattringer, Andreas, Moser, Dietmar, Dullinger, Iwona, Hülber, Karl, Rumpf, Sabine B., Block, Svenja, Bossdorf, Oliver, Carboni, Marta, Conti, Luisa, Dawson, Wayne, Haeuser, Emily, Hermy, Martin, Münkemüller, Tamara, Parepa, Madalin, Thuiller, Wilfried, Van der Veken, Sebastiaan, Verheyen, Kris, van Kleunen, Mark, Essl, Franz, Dullinger, Stefan, Universität Wien, Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen, Laboratoire d'Ecologie Alpine (LECA ), Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Università degli Studi Roma Tre, Department of Ecology [Warsaw], Institute of Zoology [Warsaw], Faculty of Biology [Warsaw], University of Warsaw (UW)-University of Warsaw (UW)-Faculty of Biology [Warsaw], University of Warsaw (UW)-University of Warsaw (UW), Université Catholique de Louvain = Catholic University of Louvain (UCL), Klonner, G., Wessely, J., Gattringer, A., Moser, D., Dullinger, I., Hulber, K., Rumpf, S. B., Block, S., Bossdorf, O., Carboni, M., Conti, L., Dawson, W., Haeuser, E., Hermy, M., Munkemuller, T., Parepa, M., Thuiller, W., Van der Veken, S., Verheyen, K., van Kleunen, M., Essl, F., and Dullinger, S.
- Subjects
NICHE SHIFTS ,DYNAMICS ,range dynamics ,Evolution ,Plant naturalization ,Biodiversity & Conservation ,MODELS ,biological invasions ,biological invasion ,Environmental Sciences & Ecology ,Behavior and Systematics ,INTRODUCTION HISTORY ,propagule pressure ,DISTURBANCE ,ACCUMULATION ,Science & Technology ,Ecology ,horticulture ,Biology and Life Sciences ,FRAMEWORK ,PROPAGULE PRESSURE ,DEBT ,plant naturalization ,climate change ,Biodiversity Conservation ,[SDV.EE.BIO]Life Sciences [q-bio]/Ecology, environment/Bioclimatology ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Life Sciences & Biomedicine ,TRAITS - Abstract
International audience; Climate warming is supposed to enlarge the area climatically suitable to the naturalization of alien garden plants in temperate regions. However, the effects of a changing climate on the spread of naturalized ornamentals have not been evaluated by spatially and temporarily explicit range modelling at larger scales so far. Here, we assess how climate change and the frequency of cultivation interactively determine the spread of 15 ornamental plants over the 21st century in Europe. We coupled species distribution modelling with simulations of demography and dispersal to predict range dynamics of these species in annual steps across a 250 x 250 m raster of the study area. Models were run under four scenarios of climate warming and six levels of cultivation intensity. Cultivation frequency was implemented as size of the area used for planting a species. Although the area climatically suitable to the 15 species increases, on average, the area predicted to be occupied by them in 2090 shrinks under two of the three climate change scenarios. This contradiction obviously arises from dispersal limitations that were pronounced although we assumed that cultivation is spatially adapting to the changing climate. Cultivation frequency had a much stronger effect on species spread than climate change, and this effect was non-linear. The area occupied increased sharply from low to moderate levels of cultivation intensity, but levelled off afterwards. Our simulations suggest that climate warming will not necessarily foster the spread of alien garden plants in Europe over the next decades. However, climatically suitable areas do increase and hence an invasion debt is likely accumulating. Restricting cultivation of species can be effective in preventing species spread, irrespective of how the climate develops. However, for being successful, they depend on high levels of compliance to keep propagule pressure at a low level.
- Published
- 2019
- Full Text
- View/download PDF
37. Geographic variation in leaf traits and palatability of a native plant invader during domestic expansion.
- Author
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Zhao YJ, Wang S, Liao ZY, Parepa M, Zhang L, Cao P, Bi J, Guo Y, Bossdorf O, Richards CL, Wu J, Li B, and Ju RT
- Subjects
- Animals, China, Demography, Plant Leaves physiology, Herbivory, Introduced Species
- Abstract
Like alien plant invasion, range expansion of native plants may threaten biodiversity and economies, rendering them native invaders. Variation in abiotic and biotic conditions across a large geographic scale greatly affects variation in traits and interactions with herbivores of native plant invaders, which is an interesting yet mostly unexplored issue. We used a common garden experiment to compare defensive/nutritional traits and palatability to generalist herbivores of 20 native (23.64° N-30.18° N) and introduced range (31.58° N-36.87° N) populations of Reynoutria japonica, which is a native invader following range expansion in China. We analyzed the relationships among herbivore pressure, climate, plant chloroplast haplotypes, leaf traits, and herbivore performance. Of the 16 variables tested, we observed range differences in 11 variables and latitudinal clines in nine variables. In general, herbivores performed better on the introduced plants than on the native plants, and better on the high-latitude plants than on the low-latitude plants within the introduced populations. Three key traits (leaf thickness, specific leaf area, and carbon-to-nitrogen [C:N] ratio) determined palatability to herbivores and were significantly associated with temperature and/or precipitation of plant provenance as well as with plant haplotypes but not with herbivore pressure. Our results revealed a causal sequence from plant-range-based environmental forces and genetic context to plant quality and palatability to herbivores in R. japonica. These findings suggest a post-introduction evolution of R. japonica, which may partly explain the colonization success of this important native, but invasive plant., (© 2024 The Ecological Society of America.)
- Published
- 2024
- Full Text
- View/download PDF
38. Environment-induced heritable variations are common in Arabidopsis thaliana.
- Author
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Lin X, Yin J, Wang Y, Yao J, Li QQ, Latzel V, Bossdorf O, and Zhang YY
- Subjects
- Genetic Variation, Genome, Plant, Environment, Gene-Environment Interaction, Arabidopsis genetics, Phenotype, Gene Expression Regulation, Plant, DNA Transposable Elements genetics, Genotype
- Abstract
Parental or ancestral environments can induce heritable phenotypic changes, but whether such environment-induced heritable changes are a common phenomenon remains unexplored. Here, we subject 14 genotypes of Arabidopsis thaliana to 10 different environmental treatments and observe phenotypic and genome-wide gene expression changes over four successive generations. We find that all treatments caused heritable phenotypic and gene expression changes, with a substantial proportion stably transmitted over all observed generations. Intriguingly, the susceptibility of a genotype to environmental inductions could be predicted based on the transposon abundance in the genome. Our study thus challenges the classic view that the environment only participates in the selection of heritable variation and suggests that the environment can play a significant role in generating of heritable variations., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
39. DNA methylation in the wild: epigenetic transgenerational inheritance can mediate adaptation in clones of wild strawberry (Fragaria vesca).
- Author
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Sammarco I, Díez Rodríguez B, Galanti D, Nunn A, Becker C, Bossdorf O, Münzbergová Z, and Latzel V
- Subjects
- Humans, Epigenesis, Genetic, Phenotype, Plants genetics, Clone Cells, DNA Methylation genetics, Fragaria genetics
- Abstract
Due to the accelerating climate change, it is crucial to understand how plants adapt to rapid environmental changes. Such adaptation may be mediated by epigenetic mechanisms like DNA methylation, which could heritably alter phenotypes without changing the DNA sequence, especially across clonal generations. However, we are still missing robust evidence of the adaptive potential of DNA methylation in wild clonal populations. Here, we studied genetic, epigenetic and transcriptomic variation of Fragaria vesca, a predominantly clonally reproducing herb. We examined samples from 21 natural populations across three climatically distinct geographic regions, as well as clones of the same individuals grown in a common garden. We found that epigenetic variation was partly associated with climate of origin, particularly in non-CG contexts. Importantly, a large proportion of this variation was heritable across clonal generations. Additionally, a subset of these epigenetic changes affected the expression of genes mainly involved in plant growth and responses to pathogen and abiotic stress. These findings highlight the potential influence of epigenetic changes on phenotypic traits. Our findings indicate that variation in DNA methylation, which can be environmentally inducible and heritable, may enable clonal plant populations to adjust to their environmental conditions even in the absence of genetic adaptation., (© 2023 The Authors New Phytologist © 2023 New Phytologist Foundation.)
- Published
- 2024
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40. Transposon dynamics in the emerging oilseed crop Thlaspi arvense.
- Author
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Contreras-Garrido A, Galanti D, Movilli A, Becker C, Bossdorf O, Drost HG, and Weigel D
- Subjects
- Humans, Retroelements genetics, Epigenesis, Genetic, Plant Breeding, Genetic Drift, DNA Transposable Elements genetics, Evolution, Molecular, Nuclear Proteins genetics, Thlaspi genetics, Thlaspi metabolism
- Abstract
Genome evolution is partly driven by the mobility of transposable elements (TEs) which often leads to deleterious effects, but their activity can also facilitate genetic novelty and catalyze local adaptation. We explored how the intraspecific diversity of TE polymorphisms might contribute to the broad geographic success and adaptive capacity of the emerging oil crop Thlaspi arvense (field pennycress). We classified the TE inventory based on a high-quality genome assembly, estimated the age of retrotransposon TE families and comprehensively assessed their mobilization potential. A survey of 280 accessions from 12 regions across the Northern hemisphere allowed us to quantify over 90,000 TE insertion polymorphisms (TIPs). Their distribution mirrored the genetic differentiation as measured by single nucleotide polymorphisms (SNPs). The number and types of mobile TE families vary substantially across populations, but there are also shared patterns common to all accessions. Ty3/Athila elements are the main drivers of TE diversity in T. arvense populations, while a single Ty1/Alesia lineage might be particularly important for transcriptome divergence. The number of retrotransposon TIPs is associated with variation at genes related to epigenetic regulation, including an apparent knockout mutation in BROMODOMAIN AND ATPase DOMAIN-CONTAINING PROTEIN 1 (BRAT1), while DNA transposons are associated with variation at the HSP19 heat shock protein gene. We propose that the high rate of mobilization activity can be harnessed for targeted gene expression diversification, which may ultimately present a toolbox for the potential use of transposition in breeding and domestication of T. arvense., Competing Interests: I have read the journal’s policy and the authors of this manuscript have the following competing interests: D.W. holds equity in Computomics, which advises breeders. D.W. advises KWS SE, a plant breeder and seed producer. All the other authors have declared that no competing interests exist. , (Copyright: © 2024 Contreras-Garrido et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2024
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41. Cliffs as priority ecosystems.
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March-Salas M, Lorite J, Bossdorf O, and Scheepens JF
- Published
- 2023
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42. Recent evolution of flowering time across multiple European plant species correlates with changes in aridity.
- Author
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Rauschkolb R, Durka W, Godefroid S, Dixon L, Bossdorf O, Ensslin A, and Scheepens JF
- Subjects
- Seeds, Phenotype, Time Factors, Flowers, Climate Change, Plants, Reproduction
- Abstract
Ongoing global warming and increasing drought frequencies impact plant populations and potentially drive rapid evolutionary adaptations. Historical comparisons, where plants grown from seeds collected in the past are compared to plants grown from freshly collected seeds from populations of the same sites, are a powerful method to investigate recent evolutionary changes across many taxa. We used 21-38 years old seeds of 13 European plant species, stored in seed banks and originating from Mediterranean and temperate regions, together with recently collected seeds from the same sites for a greenhouse experiment to investigate shifts in flowering phenology as a potential result of adaptive evolution to changes in drought intensities over the last decades. We further used single nucleotide polymorphism (SNP) markers to quantify relatedness and levels of genetic variation. We found that, across species, current populations grew faster and advanced their flowering. These shifts were correlated with changes in aridity at the population origins, suggesting that increased drought induced evolution of earlier flowering, whereas decreased drought lead to weak or inverse shifts in flowering phenology. In five out of the 13 species, however, the SNP markers detected strong differences in genetic variation and relatedness between the past and current populations collected, indicating that other evolutionary processes may have contributed to changes in phenotypes. Our results suggest that changes in aridity may have influenced the evolutionary trajectories of many plant species in different regions of Europe, and that flowering phenology may be one of the key traits that is rapidly evolving., (© 2023. The Author(s).)
- Published
- 2023
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43. Plants cultivated for ecosystem restoration can evolve toward a domestication syndrome.
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Conrady M, Lampei C, Bossdorf O, Hölzel N, Michalski S, Durka W, and Bucharova A
- Subjects
- Crops, Agricultural genetics, Seeds genetics, Phenotype, Ecosystem, Domestication
- Abstract
The UN Decade on Ecosystem Restoration calls for upscaling restoration efforts, but many terrestrial restoration projects are constrained by seed availability. To overcome these constraints, wild plants are increasingly propagated on farms to produce seeds for restoration projects. During on-farm propagation, the plants face non-natural conditions with different selection pressures, and they might evolve adaptations to cultivation that parallel those of agricultural crops, which could be detrimental to restoration success. To test this, we compared traits of 19 species grown from wild-collected seeds to those from their farm-propagated offspring of up to four cultivation generations, produced by two European seed growers, in a common garden experiment. We found that some plants rapidly evolved across cultivated generations towards increased size and reproduction, lower within-species variability, and more synchronized flowering. In one species, we found evolution towards less seed shattering. These trait changes are typical signs of the crop domestication syndrome, and our study demonstrates that it can also occur during cultivation of wild plants, within only few cultivated generations. However, there was large variability between cultivation lineages, and the observed effect sizes were generally rather moderate, which suggests that the detected evolutionary changes are unlikely to compromise farm-propagated seeds for ecosystem restoration. To mitigate the potential negative effects of unintended selection, we recommend to limit the maximum number of generations the plants can be cultivated without replenishing the seed stock from new wild collections.
- Published
- 2023
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44. Parental environmental effects are common and strong, but unpredictable, in Arabidopsis thaliana.
- Author
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Latzel V, Fischer M, Groot M, Gutzat R, Lampei C, Ouborg J, Parepa M, Schmid K, Vergeer P, Zhang Y, and Bossdorf O
- Subjects
- Phenotype, Genotype, Climate, Stress, Physiological, Arabidopsis genetics
- Abstract
The phenotypes of plants can be influenced by the environmental conditions experienced by their parents. However, there is still much uncertainty about how common and how predictable such parental environmental effects really are. We carried out a comprehensive experimental test for parental effects, subjecting plants of multiple Arabidopsis thaliana genotypes to 24 different biotic or abiotic stresses, or combinations thereof, and comparing their offspring phenotypes in a common environment. The majority of environmental stresses caused significant parental effects, with -35% to +38% changes in offspring fitness. The expression of parental effects was strongly genotype-dependent, and multiple environmental stresses often acted nonadditively when combined. The direction and magnitude of parental effects were unrelated to the direct effects on the parents: Some environmental stresses did not affect the parents but caused substantial effects on offspring, while for others, the situation was reversed. Our study demonstrates that parental environmental effects are common and often strong in A. thaliana, but they are genotype-dependent, act nonadditively, and are difficult to predict. We should thus be cautious with generalizing from simple studies with single plant genotypes and/or only few individual environmental stresses. A thorough and general understanding of parental effects requires large multifactorial experiments., (© 2022 The Authors. New Phytologist © 2022 New Phytologist Foundation.)
- Published
- 2023
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45. Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense.
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Galanti D, Ramos-Cruz D, Nunn A, Rodríguez-Arévalo I, Scheepens JF, Becker C, and Bossdorf O
- Subjects
- DNA Transposable Elements, Biofuels, Plant Breeding, DNA Methylation genetics, Epigenesis, Genetic, DNA, Intergenic, Genetic Variation, Thlaspi genetics
- Abstract
Natural plant populations often harbour substantial heritable variation in DNA methylation. However, a thorough understanding of the genetic and environmental drivers of this epigenetic variation requires large-scale and high-resolution data, which currently exist only for a few model species. Here, we studied 207 lines of the annual weed Thlaspi arvense (field pennycress), collected across a large latitudinal gradient in Europe and propagated in a common environment. By screening for variation in DNA sequence and DNA methylation using whole-genome (bisulfite) sequencing, we found significant epigenetic population structure across Europe. Average levels of DNA methylation were strongly context-dependent, with highest DNA methylation in CG context, particularly in transposable elements and in intergenic regions. Residual DNA methylation variation within all contexts was associated with genetic variants, which often co-localized with annotated methylation machinery genes but also with new candidates. Variation in DNA methylation was also significantly associated with climate of origin, with methylation levels being lower in colder regions and in more variable climates. Finally, we used variance decomposition to assess genetic versus environmental associations with differentially methylated regions (DMRs). We found that while genetic variation was generally the strongest predictor of DMRs, the strength of environmental associations increased from CG to CHG and CHH, with climate-of-origin as the strongest predictor in about one third of the CHH DMRs. In summary, our data show that natural epigenetic variation in Thlaspi arvense is significantly associated with both DNA sequence and environment of origin, and that the relative importance of the two factors strongly depends on the sequence context of DNA methylation. T. arvense is an emerging biofuel and winter cover crop; our results may hence be relevant for breeding efforts and agricultural practices in the context of rapidly changing environmental conditions., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2022
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46. Forest wildflowers bloom earlier as Europe warms: lessons from herbaria and spatial modelling.
- Author
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Willems FM, Scheepens JF, and Bossdorf O
- Subjects
- Europe, Forests, Plants, Seasons, Temperature, Climate Change, Flowers physiology
- Abstract
Today plants often flower earlier due to climate warming. Herbarium specimens are excellent witnesses of such long-term changes. However, the magnitude of phenological shifts may vary geographically, and the data are often clustered. Therefore, large-scale analyses of herbarium data are prone to pseudoreplication and geographical biases. We studied over 6000 herbarium specimens of 20 spring-flowering forest understory herbs from Europe to understand how their phenology had changed during the last century. We estimated phenology trends with or without taking spatial autocorrelation into account. On average plants now flowered over 6 d earlier than at the beginning of the last century. These changes were strongly associated with warmer spring temperatures. Flowering time advanced 3.6 d per 1°C warming. Spatial modelling showed that, in some parts of Europe, plants flowered earlier or later than expected. Without accounting for this, the estimates of phenological shifts were biased and model fits were poor. Our study indicates that forest wildflowers in Europe strongly advanced their phenology in response to climate change. However, these phenological shifts differ geographically. This shows that it is crucial to combine the analysis of herbarium data with spatial modelling when testing for long-term phenology trends across large spatial scales., (© 2022 The Authors New Phytologist © 2022 New Phytologist Foundation.)
- Published
- 2022
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47. Evolution of plant drought strategies and herbivore tolerance after two decades of climate change.
- Author
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Rauschkolb R, Li Z, Godefroid S, Dixon L, Durka W, Májeková M, Bossdorf O, Ensslin A, and Scheepens JF
- Subjects
- Adaptation, Physiological genetics, Biological Evolution, Herbivory, Plants, Climate Change, Droughts
- Abstract
Ongoing global warming, coupled with increased drought frequencies, together with other biotic drivers may have resulted in complex evolutionary adaptation. The resurrection approach, comparing ancestors raised from stored seeds with their contemporary descendants under common conditions, is a powerful method to test for recent evolution in plant populations. We used 21-26-yr-old seeds of four European plant species - Matthiola tricuspidata, Plantago crassifolia, Clinopodium vulgare and Leontodon hispidus - stored in seed banks together with re-collected seeds from their wild populations. To test for evolutionary changes, we conducted a glasshouse experiment that quantified heritable changes in plant responses to drought and simulated insect herbivory. In three out of the four studied species, we found evidence that descendants had evolved shorter life cycles through faster growth and flowering. Shifts in the osmotic potential and leaf dry matter content indicated that descendants also evolved increased drought tolerance. A comparison of quantitative genetic differentiation (Q
ST ) vs neutral molecular differentiation (FST ) values, using double digest restriction-site associated DNA (ddRAD) genotyping data, suggested that directional selection, and therefore adaptive evolution, was underlying some of the observed phenotypic changes. In summary, our study revealed evolutionary changes in plant populations over the last decades that are consistent with adaptation of drought escape and tolerance as well as herbivory avoidance., (© 2022 The Authors. New Phytologist © 2022 New Phytologist Foundation.)- Published
- 2022
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48. Climate warming can reduce biocontrol efficacy and promote plant invasion due to both genetic and transient metabolomic changes.
- Author
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Sun Y, Züst T, Silvestro D, Erb M, Bossdorf O, Mateo P, Robert C, and Müller-Schärer H
- Subjects
- Bayes Theorem, Climate Change, Herbivory physiology, Plants, Ambrosia, Ecosystem
- Abstract
Climate change may affect plant-herbivore interactions and their associated ecosystem functions. In an experimental evolution approach, we subjected replicated populations of the invasive Ambrosia artemisiifolia to a combination of simulated warming and herbivory by a potential biocontrol beetle. We tracked genomic and metabolomic changes across generations in field populations and assessed plant offspring phenotypes in a common environment. Using an integrated Bayesian model, we show that increased offspring biomass in response to warming arose through changes in the genetic composition of populations. In contrast, increased resistance to herbivory arose through a shift in plant metabolomic profiles without genetic changes, most likely by transgenerational induction of defences. Importantly, while increased resistance was costly at ambient temperatures, warming removed this constraint and favoured both vigorous and better defended plants under biocontrol. Climate warming may thus decrease biocontrol efficiency and promote Ambrosia invasion, with potentially serious economic and health consequences., (© 2022 The Authors. Ecology Letters published by John Wiley & Sons Ltd.)
- Published
- 2022
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49. Climate warming changes synchrony of plants and pollinators.
- Author
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Freimuth J, Bossdorf O, Scheepens JF, and Willems FM
- Subjects
- Animals, Insecta, Plants, Seasons, Temperature, Climate Change, Ecosystem
- Abstract
Climate warming changes the phenology of many species. When interacting organisms respond differently, climate change may disrupt their interactions and affect the stability of ecosystems. Here, we used global biodiversity facility occurrence records to examine phenology trends in plants and their associated insect pollinators in Germany since the 1980s. We found strong phenological advances in plants but differences in the extent of shifts among pollinator groups. The temporal trends in plant and insect phenologies were generally associated with interannual temperature variation and thus probably driven by climate change. When examining the synchrony of species-level plant-pollinator interactions, their temporal trends differed among pollinator groups. Overall, plant-pollinator interactions become more synchronized, mainly because the phenology of plants, which historically lagged behind that of the pollinators, responded more strongly to climate change. However, if the observed trends continue, many interactions may become more asynchronous again in the future. Our study suggests that climate change affects the phenologies of both plants and insects and that it also influences the synchrony of plant-pollinator interactions.
- Published
- 2022
- Full Text
- View/download PDF
50. Genome report: a draft genome of Alliaria petiolata (garlic mustard) as a model system for invasion genetics.
- Author
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Alabi N, Wu Y, Bossdorf O, Rieseberg LH, and Colautti RI
- Subjects
- Genome, Models, Biological, Molecular Sequence Annotation, Transcriptome, Brassicaceae genetics, Garlic
- Abstract
The emerging field of invasion genetics examines the genetic causes and consequences of biological invasions, but few study systems are available that integrate deep ecological knowledge with genomic tools. Here, we report on the de novo assembly and annotation of a genome for the biennial herb Alliaria petiolata (M. Bieb.) Cavara and Grande (Brassicaceae), which is widespread in Eurasia and invasive across much of temperate North America. Our goal was to sequence and annotate a genome to complement resources available from hundreds of published ecological studies, a global field survey, and hundreds of genetic lines maintained in Germany and Canada. We sequenced a genotype (EFCC3-3-20) collected from the native range near Venice, Italy, and sequenced paired-end and mate pair libraries at ∼70 × coverage. A de novo assembly resulted in a highly continuous draft genome (N50 = 121 Mb; L50 = 2) with 99.7% of the 1.1 Gb genome mapping to scaffolds of at least 50 Kb in length. A total of 64,770 predicted genes in the annotated genome include 99% of plant BUSCO genes and 98% of transcriptome reads. Consistent with previous reports of (auto)hexaploidy in western Europe, we found that almost one-third of BUSCO genes (390/1440) mapped to two or more scaffolds despite <2% genome-wide average heterozygosity. The continuity and gene space quality of our draft assembly will enable molecular and functional genomic studies of A. petiolata to address questions relevant to invasion genetics and conservation strategies., (© The Author(s) 2021. Published by Oxford University Press on behalf of Genetics Society of America.)
- Published
- 2021
- Full Text
- View/download PDF
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