12 results on '"Bochkov, Ivan"'
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2. Polynomial birth–death processes and the second conjecture of Valent.
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Bochkov, Ivan
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POLYNOMIALS , *LOGICAL prediction , *MATRICES (Mathematics) , *BIRTH & death processes (Stochastic processes) , *WEIGHTS & measures - Abstract
Abstract The conjecture of Valent about the type of Jacobi matrices with polynomially growing weights is proved. [ABSTRACT FROM AUTHOR]
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- 2019
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3. Nanostructured zinc oxide filler for modification of polymer-polymer composites: structure and tribological properties.
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Bochkov, Ivan, Kokins, Arvis, Meri, Remo Merijs, Zicans, Janis, Padgurskas, Juozas, Zunda, Andrius, and Kreivaitis, Raimondas
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ZINC oxide , *FILLER materials , *POLYMERIC nanocomposites , *TRIBOLOGY , *LUBRICATION & lubricants , *ISOTACTIC polymers , *POLYPROPYLENE - Abstract
Self-lubricating behaviour of materials is very demanded in industry. In this study we investigated the effect of anisometric nanostructured ZnO filler (tetrapod shaped particles with arm length of 70-100 nm and diameter of 10 nm) and ethylene-1-octene copolymer on structure and tribological properties of isotactic polypropylene (PP). It was observed that addition of EOC caused the increment of roughness as well as of the coefficient of friction (COF) of the investigated composites. Addition of ZnO, in its turn, caused decrement of the COF and improvement of surface quality at certain nanofiller contents. [ABSTRACT FROM AUTHOR]
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- 2015
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4. Accelerated Weathering Testing (AWT) and Bacterial Biodegradation Effects on Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV)/Rapeseed Microfiber Biocomposites Properties.
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Žiganova, Madara, Merijs-Meri, Remo, Zicāns, Jānis, Ābele, Agnese, Bochkov, Ivan, and Ivanova, Tatjana
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MICROFIBERS , *ACCELERATED life testing , *WEATHERING , *BIODEGRADATION , *THERMOPHYSICAL properties , *SOIL degradation , *POLYMER degradation - Abstract
In the context of sustainable materials, this study explores the effects of accelerated weathering testing and bacterial biodegradation on poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV)/rapeseed microfiber biocomposites. Accelerated weathering, simulating outdoor environmental conditions, and bacterial biodegradation, representing natural degradation processes in soil, were employed to investigate the changes in the mechanical, thermal and morphological properties of these materials during its post-production life cycle. Attention was paid to the assessment of the change of structural, mechanical and calorimetric properties of alkali and N-methylmorpholine N-oxide (NMMO)-treated rapeseed microfiber (RS)-reinforced plasticized PHBV composites before and after accelerated weathering. Results revealed that accelerated weathering led to an increase in stiffness, but a reduction in tensile strength and elongation at break, of the investigated PHBV biocomposites. Additionally, during accelerated weathering, the crystallinity of PHBV biocomposites increased, especially in the presence of RS, due to both the hydrolytic degradation of the polymer matrix and the nucleating effect of the filler. It has been observed that an increase in PHBV crystallinity, determined by DSC measurements, correlates with the intensity ratio I1225/1180 obtained from FTIR-ATR data. The treatment of RS microfibers increased the biodegradation capability of the developed PHBV composites, especially in the case of chemically untreated RS. All the developed PHBV composites demonstrated faster biodegradation in comparison to neat PHBV matrix. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Visco-Elastic and Thermal Properties of Microbiologically Synthesized Polyhydroxyalkanoate Plasticized with Triethyl Citrate.
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Žiganova, Madara, Merijs-Meri, Remo, Zicāns, Jānis, Bochkov, Ivan, Ivanova, Tatjana, Vīgants, Armands, Ence, Enno, and Štrausa, Evita
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THERMAL properties , *MODULUS of elasticity , *ULTIMATE strength , *POLYHYDROXYALKANOATES , *POLYHYDROXYBUTYRATE , *POLY-beta-hydroxybutyrate , *CITRATES - Abstract
The current research is devoted to the investigation of the plasticization of polyhydroxybutyrate (PHB) and polyhydroxybutyrate-co-hydroxyvalerate (PHBV) with triethyl citrate (TEC). Three different PHB or PHBV-based systems with 10, 20, and 30 wt.% of TEC were prepared by two-roll milling. The effect of TEC on the rheological, thermal, mechanical, and calorimetric properties of the developed compression-molded PHB and PHBV-based systems was determined. It was revealed that the addition of TEC significantly influenced the melting behavior of both polyhydroxyalkanoates (PHA), reducing their melting temperatures and decreasing viscosities. It was also revealed that all the investigated systems demonstrated less than 2% weight loss until 200 °C and rapid degradation did not occur until 240–260 °C in an oxidative environment. Apart from this, a remarkable increase (ca 2.5 times) in ultimate tensile deformation εB was observed by increasing the amount of TEC in either PHB or PHBV. A concomitant, considerable drop in ultimate strength σB and modulus of elasticity E was observed. Comparatively, the plasticization efficiency of TEC was greater in the case of PHBV. [ABSTRACT FROM AUTHOR]
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- 2023
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6. Effect of Agricultural Biomass Residues on the Properties of Recycled Polypropylene/Polyethylene Composites.
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Ābele, Agnese, Merijs-Meri, Remo, Žiganova, Madara, Iesalniece, Zanda, and Bochkov, Ivan
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AGRICULTURAL wastes , *POLYETHYLENE , *HIGH density polyethylene , *POLYPROPYLENE , *IMPACT strength , *THERMAL stability , *POLYOLEFINS , *BUCKWHEAT - Abstract
The aim of the study was to assess the usefulness of agricultural biomass residues as reinforcement in recycled polymer matrices. In this study, recycled polypropylene and high-density polyethylene composites (rPPPE) filled with three types of biomass residues, sweet clover straws (SCS), buckwheat straws (BS) and rapeseed straws (RS), are presented. The effects of the fiber type and the fibers content on the rheological behavior, mechanical properties (including tensile, flexural and impact strength), thermal stability and moisture absorbance were determined, in addition to morphological analysis. It was revealed that the addition of SCS, BS or RS increased the materials' stiffness and strength. The reinforcement effect increased as the loading of the fibers was increased, especially for BS composites in the flexural test. After the moisture absorbance test, it was found that the reinforcement effect slightly increased for the composites with 10% fibers but decreases with 40% fibers. The results highlight that the selected fibers are a feasible reinforcement for recycled polyolefin blend matrices. [ABSTRACT FROM AUTHOR]
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- 2023
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7. Characterisation of Nanoclay and Spelt Husk Microfiller-Modified Polypropylene Composites.
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Žiganova, Madara, Merijs-Meri, Remo, Zicāns, Jānis, Ivanova, Tatjana, Bochkov, Ivan, Kalniņš, Mārtiņš, Błędzki, Andrzej K., and Danilovas, Paulius P.
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HYBRID materials , *POLYPROPYLENE , *AGRICULTURAL wastes , *THERMAL properties , *CLAY minerals , *POLYMERIC nanocomposites - Abstract
Current research is devoted to the investigation of spelt husk (SH) and nanoclay-modified compatibilised polypropylene (PP) binary and ternary composites for injection-moulding applications. PP composites were obtained using twin-screw extrusion. The content of mechanically milled SH microfiller with aspect ratio within 2 and 6 was fixed at 40 wt.%, whereas the amount of nanoclay functional filler in the polypropylene matrix was changed in the range from 0.5 to 5 wt.%. Nanoclay filler was introduced in the polypropylene matrix either in the form of nanoclay powder (C) or as a masterbatch (M). Regular distribution of the clay nanofiller within the polymer matrix has been observed, disregarding its form and concentration. The effects of the individual or combined addition of SH microreinforcement and nanoclay fillers on the rheological, mechanical, calorimetric, and thermal properties of the developed PP composites were investigated. It is revealed that the addition of the nanoclay fillers insignificantly influences the viscosity of both PP nanocomposites and hybrid composites with SH. Additionally, for PP nanocomposites, remarkable increases in tensile and flexural modules and strength are observed by maintaining considerable ultimate deformations, mainly in the case of M-containing systems. Concomitantly, because of the addition of the nanoclay filler, the improvement in thermal stability of PP nanocomposites and PP hybrid composites with SH is observed. As a result of SH addition, considerable increases in tensile and flexural modules are also observed. Results of the research demonstrate the potential of the use of natural materials (agricultural residues and clay minerals) for the development of PP composites with increased stiffness and thermal properties. [ABSTRACT FROM AUTHOR]
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- 2022
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8. Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice.
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Colella, Jocelyn P, Tigano, Anna, Dudchenko, Olga, Omer, Arina D, Khan, Ruqayya, Bochkov, Ivan D, Aiden, Erez L, and MacManes, Matthew D
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BIODIVERSITY conservation , *PEROMYSCUS maniculatus , *DEMOGRAPHY , *MICE , *TRYPSIN - Abstract
Warming climate and increasing desertification urge the identification of genes involved in heat and dehydration tolerance to better inform and target biodiversity conservation efforts. Comparisons among extant desert-adapted species can highlight parallel or convergent patterns of genome evolution through the identification of shared signatures of selection. We generate a chromosome-level genome assembly for the canyon mouse (Peromyscus crinitus) and test for a signature of parallel evolution by comparing signatures of selective sweeps across population-level genomic resequencing data from another congeneric desert specialist (Peromyscus eremicus) and a widely distributed habitat generalist (Peromyscus maniculatus), that may be locally adapted to arid conditions. We identify few shared candidate loci involved in desert adaptation and do not find support for a shared pattern of parallel evolution. Instead, we hypothesize divergent molecular mechanisms of desert adaptation among deer mice, potentially tied to species-specific historical demography, which may limit or enhance adaptation. We identify a number of candidate loci experiencing selective sweeps in the P. crinitus genome that are implicated in osmoregulation (Trypsin, Prostasin) and metabolic tuning (Kallikrein, eIF2-alpha kinase GCN2, APPL1/2), which may be important for accommodating hot and dry environmental conditions. [ABSTRACT FROM AUTHOR]
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- 2021
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9. Some aspects of the development of oat husks containing polypropylene composites.
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Meri, Remo Merijs, Zicans, Janis, Ivanova, Tatjana, Bochkov, Ivan, Varkale, Madara, Franciszczak, Piotr, Bledzki, Andrzej K., and Gravitis, Janis
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POLYPROPYLENE , *COMPOSITE materials , *LIGNOCELLULOSE , *FILLER materials , *THERMOGRAVIMETRY , *FLEXURAL strength - Abstract
Polypropylene (PP) composites with lignocellulosic fibers are investigated. Oat husks and wood flour are compared in respect to their chemical composition. Grinding protocol for development of lignocellulosic filler from oat husks has been evaluated. Reinforcement efficiency of oat husks derived filler is compared with wood flour reference. PP composites with wood flour or oat husks reinforcement are manufactured by melt compounding. Thermal and flexural properties of PP composites are investigated. It is observed that thermogravimetric behavior of oat husks reinforced PP composite is similar to that of wood flour reinforced system. Oat husks derived lignocellulosic fibers and wood flour both can be used to improve flexural modulus and maximal flexural strength of PP, although the modifying effect of the latter is somewhat greater. [ABSTRACT FROM AUTHOR]
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- 2018
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10. Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.
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Sanborn, Adrian L., Rao, Suhas S. P., Su-Chen Huang, Durand, Neva C., Huntley, Miriam H., Jewett, Andrew I., Bochkov, Ivan D., Chinnappan, Dharmaraj, Cutkosky, Ashok, Jian Li, Geeting, Kristopher P., Gnirke, Andreas, Melnikov, Alexandre, McKenna, Doug, Stamenova, Elena K., Lander, Eric S., and Aiden, Erez Lieberman
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CHROMATIN , *GENETIC engineering research , *GENOMES , *PROTEIN folding , *BINDING sites - Abstract
We recently used in situ Hi-C to create kilobase-resolution 3D maps of mammalian genomes. Here, we combine these maps with new Hi-C, microscopy, and genome-editing experiments to study the physical structure of chromatin fibers, domains, and loops. We find that the observed contact domains are inconsistent with the equilibrium state for an ordinary condensed polymer. Combining Hi-C data and novel mathematical theorems, we show that contact domains are also not consistent with a fractal globule. Instead, we use physical simulations to study two models of genome folding. In one, intermonomer attraction during polymer condensation leads to formation of an anisotropic "tension globule." In the other, CCCTC-binding factor (CTCF) and cohesin act together to extrude unknotted loops during interphase. Both models are consistent with the observed contact domains and with the observation that contact domains tend to form inside loops. However, the extrusion model explains a far wider array of observations, such as why loops tend not to overlap and why the CTCF-binding motifs at pairs of loop anchors lie in the convergent orientation. Finally, we perform 13 genome-editing experiments examining the effect of altering CTCF-binding sites on chromatin folding. The convergent rule correctly predicts the affected loops in every case. Moreover, the extrusion model accurately predicts in silico the 3D maps resulting from each experiment using only the location of CTCF-binding sites in the WT. Thus, we show that it is possible to disrupt, restore, and move loops and domains using targeted mutations as small as a single base pair. [ABSTRACT FROM AUTHOR]
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- 2015
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11. A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping.
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Rao, Suhas S.P., Huntley, Miriam H., Durand, Neva C., Stamenova, Elena K., Bochkov, Ivan D., Robinson, James T., Sanborn, Adrian L., Machol, Ido, Omer, Arina D., Lander, Eric S., and Aiden, Erez Lieberman
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GENOMES , *CHROMATIN , *CELL lines , *TRANSCRIPTION factors , *GENE expression - Published
- 2015
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12. Cohesin Loss Eliminates All Loop Domains.
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Huang, Xingfan, Shin, Jaeweon, Ye, Ziyi, Turner, Douglass, Huang, Su-Chen, Bochkov, Ivan D., Omer, Arina D., Shamim, Muhammad S., Rao, Suhas S.P., Glenn St Hilaire, Brian, Aiden, Erez Lieberman, Sanborn, Adrian L., Robinson, James T., Engreitz, Jesse M., Perez, Elizabeth M., Lander, Eric S., Johnstone, Sarah E., Bernstein, Bradley E., Kieffer-Kwon, Kyong-Rim, and Casellas, Rafael
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COHESINS , *CHROMATIN , *GENOMES , *AUXIN , *NUCLEOTIDE sequencing - Abstract
Summary The human genome folds to create thousands of intervals, called “contact domains,” that exhibit enhanced contact frequency within themselves. “Loop domains” form because of tethering between two loci—almost always bound by CTCF and cohesin—lying on the same chromosome. “Compartment domains” form when genomic intervals with similar histone marks co-segregate. Here, we explore the effects of degrading cohesin. All loop domains are eliminated, but neither compartment domains nor histone marks are affected. Loss of loop domains does not lead to widespread ectopic gene activation but does affect a significant minority of active genes. In particular, cohesin loss causes superenhancers to co-localize, forming hundreds of links within and across chromosomes and affecting the regulation of nearby genes. We then restore cohesin and monitor the re-formation of each loop. Although re-formation rates vary greatly, many megabase-sized loops recovered in under an hour, consistent with a model where loop extrusion is rapid. [ABSTRACT FROM AUTHOR]
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- 2017
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