1. The Architecture and Evolution of Cancer Neochromosomes
- Author
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Michael A. Damore, Florence Pedeutour, Andrew J. Holloway, Owen J. Marshall, Vincent Corbin, Bo W. Kim, Ola Myklebost, Jan Schröder, Ben Lansdell, Arthur Hsu, Leonardo A. Meza-Zepeda, K. H. Andy Choo, Anthony T. Papenfuss, David Thomas, Ross Brookwell, Dale W. Garsed, Jason Li, Leon Di Stefano, Andrew J. Deans, Mark Kowarsky, and Zhi-Ping Feng
- Subjects
Cancer Research ,Neocentromere ,Carcinogenesis ,Centromere ,Biology ,Gene mutation ,Chromosome aberration ,Translocation, Genetic ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,Gene duplication ,Chromosomes, Human ,Humans ,Retroperitoneal Neoplasms ,Aged ,030304 developmental biology ,Chromosome Aberrations ,Genetics ,0303 health sciences ,Chromothripsis ,Models, Genetic ,Liposarcoma ,Oncogenes ,Gene rearrangement ,Cell Biology ,Oncology ,Mutagenesis ,Evolutionary biology ,030220 oncology & carcinogenesis ,Female ,Chromosome 21 - Abstract
SummaryWe isolated and analyzed, at single-nucleotide resolution, cancer-associated neochromosomes from well- and/or dedifferentiated liposarcomas. Neochromosomes, which can exceed 600 Mb in size, initially arise as circular structures following chromothripsis involving chromosome 12. The core of the neochromosome is amplified, rearranged, and corroded through hundreds of breakage-fusion-bridge cycles. Under selective pressure, amplified oncogenes are overexpressed, while coamplified passenger genes may be silenced epigenetically. New material may be captured during punctuated chromothriptic events. Centromeric corrosion leads to crisis, which is resolved through neocentromere formation or native centromere capture. Finally, amplification terminates, and the neochromosome core is stabilized in linear form by telomere capture. This study investigates the dynamic mutational processes underlying the life history of a special form of cancer mutation.
- Published
- 2014
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