1,063 results on '"Black, Keith L."'
Search Results
2. Retinal peri-arteriolar versus peri-venular amyloidosis, hippocampal atrophy, and cognitive impairment: exploratory trial
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Dumitrascu, Oana M., Doustar, Jonah, Fuchs, Dieu-Trang, Koronyo, Yosef, Sherman, Dale S., Miller, Michelle Shizu, Johnson, Kenneth O., Carare, Roxana O., Verdooner, Steven R., Lyden, Patrick D., Schneider, Julie A., Black, Keith L., and Koronyo-Hamaoui, Maya
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- 2024
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3. Retinal pathological features and proteome signatures of Alzheimer’s disease
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Koronyo, Yosef, Rentsendorj, Altan, Mirzaei, Nazanin, Regis, Giovanna C, Sheyn, Julia, Shi, Haoshen, Barron, Ernesto, Cook-Wiens, Galen, Rodriguez, Anthony R, Medeiros, Rodrigo, Paulo, Joao A, Gupta, Veer B, Kramerov, Andrei A, Ljubimov, Alexander V, Van Eyk, Jennifer E, Graham, Stuart L, Gupta, Vivek K, Ringman, John M, Hinton, David R, Miller, Carol A, Black, Keith L, Cattaneo, Antonino, Meli, Giovanni, Mirzaei, Mehdi, Fuchs, Dieu-Trang, and Koronyo-Hamaoui, Maya
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Neurosciences ,Neurodegenerative ,Eye Disease and Disorders of Vision ,Dementia ,Aging ,Brain Disorders ,Alzheimer's Disease ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Acquired Cognitive Impairment ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Eye ,Male ,Humans ,Female ,Alzheimer Disease ,Amyloid beta-Peptides ,Proteome ,Proteomics ,Retina ,Atrophy ,Biomarkers ,Ocular abnormalities ,Neurodegenerative disorders ,S100 beta ,GFAP ,IBA1 ,scFvA13-intraneuronal oligomers ,Immune responses ,S100β ,Clinical Sciences ,Neurology & Neurosurgery - Abstract
Alzheimer's disease (AD) pathologies were discovered in the accessible neurosensory retina. However, their exact nature and topographical distribution, particularly in the early stages of functional impairment, and how they relate to disease progression in the brain remain largely unknown. To better understand the pathological features of AD in the retina, we conducted an extensive histopathological and biochemical investigation of postmortem retina and brain tissues from 86 human donors. Quantitative examination of superior and inferior temporal retinas from mild cognitive impairment (MCI) and AD patients compared to those with normal cognition (NC) revealed significant increases in amyloid β-protein (Aβ42) forms and novel intraneuronal Aβ oligomers (AβOi), which were closely associated with exacerbated retinal macrogliosis, microgliosis, and tissue atrophy. These pathologies were unevenly distributed across retinal layers and geometrical areas, with the inner layers and peripheral subregions exhibiting most pronounced accumulations in the MCI and AD versus NC retinas. While microgliosis was increased in the retina of these patients, the proportion of microglial cells engaging in Aβ uptake was reduced. Female AD patients exhibited higher levels of retinal microgliosis than males. Notably, retinal Aβ42, S100 calcium-binding protein B+ macrogliosis, and atrophy correlated with severity of brain Aβ pathology, tauopathy, and atrophy, and most retinal pathologies reflected Braak staging. All retinal biomarkers correlated with the cognitive scores, with retinal Aβ42, far-peripheral AβOi and microgliosis displaying the strongest correlations. Proteomic analysis of AD retinas revealed activation of specific inflammatory and neurodegenerative processes and inhibition of oxidative phosphorylation/mitochondrial, and photoreceptor-related pathways. This study identifies and maps retinopathy in MCI and AD patients, demonstrating the quantitative relationship with brain pathology and cognition, and may lead to reliable retinal biomarkers for noninvasive retinal screening and monitoring of AD.
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- 2023
4. Label-free hyperspectral imaging and deep-learning prediction of retinal amyloid β-protein and phosphorylated tau
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Du, Xiaoxi, Koronyo, Yosef, Mirzaei, Nazanin, Yang, Chengshuai, Fuchs, Dieu-Trang, Black, Keith L, Koronyo-Hamaoui, Maya, and Gao, Liang
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Biochemistry and Cell Biology ,Biological Sciences ,Neurodegenerative ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Aging ,Acquired Cognitive Impairment ,Dementia ,Neurosciences ,Brain Disorders ,Alzheimer's Disease ,Detection ,screening and diagnosis ,4.1 Discovery and preclinical testing of markers and technologies ,Neurological ,Alzheimer's disease ,amyloid beta-protein ,phosphorylated tau ,label-free imaging ,deep learning ,Alzheimer’s disease ,amyloid β-protein - Abstract
Alzheimer's disease (AD) is a major risk for the aging population. The pathological hallmarks of AD-an abnormal deposition of amyloid β-protein (Aβ) and phosphorylated tau (pTau)-have been demonstrated in the retinas of AD patients, including in prodromal patients with mild cognitive impairment (MCI). Aβ pathology, especially the accumulation of the amyloidogenic 42-residue long alloform (Aβ42), is considered an early and specific sign of AD, and together with tauopathy, confirms AD diagnosis. To visualize retinal Aβ and pTau, state-of-the-art methods use fluorescence. However, administering contrast agents complicates the imaging procedure. To address this problem from fundamentals, ex-vivo studies were performed to develop a label-free hyperspectral imaging method to detect the spectral signatures of Aβ42 and pS396-Tau, and predicted their abundance in retinal cross-sections. For the first time, we reported the spectral signature of pTau and demonstrated an accurate prediction of Aβ and pTau distribution powered by deep learning. We expect our finding will lay the groundwork for label-free detection of AD.
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- 2022
5. Utility of combining frailty and comorbid disease indices in predicting outcomes following craniotomy for adult primary brain tumors: A mixed-effects model analysis using the nationwide readmissions database
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Michel, Michelot, Shahrestani, Shane, Boyke, Andre E., Garcia, Catherine M., Menaker, Simon A., Aguilera-Pena, Maria Paula, Nguyen, Alan T., Yu, John S., and Black, Keith L.
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- 2024
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6. Alzheimer's disease pathophysiology in the Retina
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Gaire, Bhakta Prasad, Koronyo, Yosef, Fuchs, Dieu-Trang, Shi, Haoshen, Rentsendorj, Altan, Danziger, Ron, Vit, Jean-Philippe, Mirzaei, Nazanin, Doustar, Jonah, Sheyn, Julia, Hampel, Harald, Vergallo, Andrea, Davis, Miyah R., Jallow, Ousman, Baldacci, Filippo, Verdooner, Steven R., Barron, Ernesto, Mirzaei, Mehdi, Gupta, Vivek K., Graham, Stuart L., Tayebi, Mourad, Carare, Roxana O., Sadun, Alfredo A., Miller, Carol A., Dumitrascu, Oana M., Lahiri, Shouri, Gao, Liang, Black, Keith L., and Koronyo-Hamaoui, Maya
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- 2024
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7. Activated T cell therapy targeting glioblastoma cancer stem cells
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Miyaguchi, Ken, Wang, Hongqiang, Black, Keith L., Shiao, Stephen L., Wang, Rongfu, and Yu, John S.
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- 2023
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8. Neurosurgery at the crossroads of immunology and nanotechnology. New reality in the COVID-19 pandemic
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Ljubimov, Vladimir A, Ramesh, Arshia, Davani, Saya, Danielpour, Moise, Breunig, Joshua J, and Black, Keith L
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Nanotechnology ,Cancer ,Brain Disorders ,Orphan Drug ,Biotechnology ,Rare Diseases ,Brain Cancer ,Bioengineering ,Neurosciences ,Development of treatments and therapeutic interventions ,5.1 Pharmaceuticals ,Neurological ,Good Health and Well Being ,Animals ,Blood-Brain Barrier ,Brain Neoplasms ,COVID-19 ,Glioblastoma ,Humans ,Neurosurgery ,Pandemics ,Tumor Microenvironment ,Nano neurosurgery ,Nano immunology ,Drug delivery ,Brain cancer ,SARS-CoV-2 virus ,Pharmacology and Pharmaceutical Sciences ,Pharmacology & Pharmacy ,Pharmacology and pharmaceutical sciences - Abstract
Neurosurgery as one of the most technologically demanding medical fields rapidly adapts the newest developments from multiple scientific disciplines for treating brain tumors. Despite half a century of clinical trials, survival for brain primary tumors such as glioblastoma (GBM), the most common primary brain cancer, or rare ones including primary central nervous system lymphoma (PCNSL), is dismal. Cancer therapy and research have currently shifted toward targeted approaches, and personalized therapies. The orchestration of novel and effective blood-brain barrier (BBB) drug delivery approaches, targeting of cancer cells and regulating tumor microenvironment including the immune system are the key themes of this review. As the global pandemic due to SARS-CoV-2 virus continues, neurosurgery and neuro-oncology must wrestle with the issues related to treatment-related immune dysfunction. The selection of chemotherapeutic treatments, even rare cases of hypersensitivity reactions (HSRs) that occur among immunocompromised people, and number of vaccinations they have to get are emerging as a new chapter for modern Nano neurosurgery.
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- 2022
9. The Role of Cellular Immunity and Adaptive Immunity in Pathophysiology of Brain and Spinal Cord Tumors
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Tay, Angelique Sao-Mai S., Black, Keith L., Yu, John S., Crusio, Wim E., Series Editor, Dong, Haidong, Series Editor, Radeke, Heinfried H., Series Editor, Rezaei, Nima, Series Editor, Steinlein, Ortrud, Series Editor, Xiao, Junjie, Series Editor, and Hanaei, Sara, editor
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- 2023
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10. β-Amyloid targeting nanodrug for neuron-specific delivery of nucleic acids in Alzheimer's disease mouse models
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Israel, Liron L., Sun, Tao, Braubach, Oliver, Cox, Alysia, Shatalova, Ekaterina S., Rashid, Harun-Mohammad, Galstyan, Anna, Grodzinski, Zachary, Song, Xue Ying, Chepurna, Oksana, Ljubimov, Vladimir A., Chiechi, Antonella, Sharma, Sachin, Phebus, Connor, Wang, Yizhou, Ljubimova, Julia Y., Black, Keith L., and Holler, Eggehard
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- 2023
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11. Multifunctional Nanopolymers for Blood–Brain Barrier Delivery and Inhibition of Glioblastoma Growth through EGFR/EGFRvIII, c-Myc, and PD-1
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Patil, Rameshwar, Sun, Tao, Rashid, Mohammad Harun, Israel, Liron L, Ramesh, Arshia, Davani, Saya, Black, Keith L, Ljubimov, Alexander V, Holler, Eggehard, and Ljubimova, Julia Y
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Engineering ,Materials Engineering ,Nanotechnology ,Cancer ,Brain Disorders ,Biotechnology ,Orphan Drug ,Rare Diseases ,Brain Cancer ,Neurosciences ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Neurological ,multifunctional drugs ,blood-brain barrier ,receptor-mediated transcytosis ,brain tumor ,delivery peptides ,nanocarriers ,cancer immunology ,mRNA therapy ,blood–brain barrier ,Materials engineering - Abstract
Glioblastoma (GBM) is the most prevalent primary brain cancer in the pediatric and adult population. It is known as an untreatable tumor in urgent need of new therapeutic approaches. The objective of this work was to develop multifunctional nanomedicines to treat GBM in clinical practice using combination therapy for several targets. We developed multifunctional nanopolymers (MNPs) based on a naturally derived biopolymer, poly(β-L-malic) acid, which are suitable for central nervous system (CNS) treatment. These MNPs contain several anticancer functional moieties with the capacity of crossing the blood-brain barrier (BBB), targeting GBM cells and suppressing two important molecular markers, tyrosine kinase transmembrane receptors EGFR/EGFRvIII and c-Myc nuclear transcription factor. The reproducible syntheses of MNPs where monoclonal antibodies are replaced with AP-2 peptide for effective BBB delivery were presented. The active anticancer inhibitors of mRNA/protein syntheses were Morpholino antisense oligonucleotides (AONs). Two ways of covalent AON-polymer attachments with and without disulfide bonds were explored. These MNPs bearing AONs to EGFR/EGFRvIII and c-Myc, as well as in a combination with the polymer-attached checkpoint inhibitor anti-PD-1 antibody, orchestrated a multi-pronged attack on intracranial mouse GBM to successfully block tumor growth and significantly increase survival of brain tumor-bearing animals.
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- 2021
12. Identification of early pericyte loss and vascular amyloidosis in Alzheimer’s disease retina
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Shi, Haoshen, Koronyo, Yosef, Rentsendorj, Altan, Regis, Giovanna C, Sheyn, Julia, Fuchs, Dieu-Trang, Kramerov, Andrei A, Ljubimov, Alexander V, Dumitrascu, Oana M, Rodriguez, Anthony R, Barron, Ernesto, Hinton, David R, Black, Keith L, Miller, Carol A, Mirzaei, Nazanin, and Koronyo-Hamaoui, Maya
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Alzheimer's Disease ,Biomedical Imaging ,Aging ,Acquired Cognitive Impairment ,Eye Disease and Disorders of Vision ,Neurodegenerative ,Neurosciences ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Brain Disorders ,Dementia ,Detection ,screening and diagnosis ,4.1 Discovery and preclinical testing of markers and technologies ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Eye ,Aged ,Aged ,80 and over ,Alzheimer Disease ,Amyloid beta-Peptides ,Amyloid beta-Protein Precursor ,Amyloidosis ,Blood-Brain Barrier ,Brain ,Cerebral Amyloid Angiopathy ,Cognition ,Female ,Humans ,Male ,Pericytes ,Retina ,Vascular damage ,Neurodegeneration ,Cerebral amyloid angiopathy ,Retinopathy ,Alzheimer's disease ,Alzheimer’s disease ,Clinical Sciences ,Neurology & Neurosurgery - Abstract
Pericyte loss and deficient vascular platelet-derived growth factor receptor-β (PDGFRβ) signaling are prominent features of the blood-brain barrier breakdown described in Alzheimer's disease (AD) that can predict cognitive decline yet have never been studied in the retina. Recent reports using noninvasive retinal amyloid imaging, optical coherence tomography angiography, and histological examinations support the existence of vascular-structural abnormalities and vascular amyloid β-protein (Aβ) deposits in retinas of AD patients. However, the cellular and molecular mechanisms of such retinal vascular pathology were not previously explored. Here, by modifying a method of enzymatically clearing non-vascular retinal tissue and fluorescent immunolabeling of the isolated blood vessel network, we identified substantial pericyte loss together with significant Aβ deposition in retinal microvasculature and pericytes in AD. Evaluation of postmortem retinas from a cohort of 56 human donors revealed an early and progressive decrease in vascular PDGFRβ in mild cognitive impairment (MCI) and AD compared to cognitively normal controls. Retinal PDGFRβ loss significantly associated with increased retinal vascular Aβ40 and Aβ42 burden. Decreased vascular LRP-1 and early apoptosis of pericytes in AD retina were also detected. Mapping of PDGFRβ and Aβ40 levels in pre-defined retinal subregions indicated that certain geometrical and cellular layers are more susceptible to AD pathology. Further, correlations were identified between retinal vascular abnormalities and cerebral Aβ burden, cerebral amyloid angiopathy (CAA), and clinical status. Overall, the identification of pericyte and PDGFRβ loss accompanying increased vascular amyloidosis in Alzheimer's retina implies compromised blood-retinal barrier integrity and provides new targets for AD diagnosis and therapy.
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- 2020
13. Activated Bone Marrow-Derived Macrophages Eradicate Alzheimer's-Related Aβ42 Oligomers and Protect Synapses.
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Li, Songlin, Hayden, Eric Y, Garcia, Veronica J, Fuchs, Dieu-Trang, Sheyn, Julia, Daley, David A, Rentsendorj, Altan, Torbati, Tania, Black, Keith L, Rutishauser, Ueli, Teplow, David B, Koronyo, Yosef, and Koronyo-Hamaoui, Maya
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Hippocampus ,Entorhinal Cortex ,Neurons ,Synapses ,Cells ,Cultured ,Macrophages ,Animals ,Mice ,Inbred C57BL ,Mice ,Transgenic ,Mice ,Alzheimer Disease ,Disease Models ,Animal ,Peptide Fragments ,Adjuvants ,Immunologic ,Immunization ,Coculture Techniques ,Macrophage Activation ,Male ,Amyloid beta-Peptides ,Glatiramer Acetate ,Alzheimer's disease ,amyloid-beta ,immunomodulation therapy ,neurodegeneration ,regeneration ,synaptogenesis ,Cells ,Cultured ,Inbred C57BL ,Transgenic ,Disease Models ,Animal ,Adjuvants ,Immunologic ,Alzheimers disease ,Immunology ,Medical Microbiology - Abstract
Impaired synaptic integrity and function due to accumulation of amyloid β-protein (Aβ42) oligomers is thought to be a major contributor to cognitive decline in Alzheimer's disease (AD). However, the exact role of Aβ42 oligomers in synaptotoxicity and the ability of peripheral innate immune cells to rescue synapses remain poorly understood due to the metastable nature of oligomers. Here, we utilized photo-induced cross-linking to stabilize pure oligomers and study their effects vs. fibrils on synapses and protection by Aβ-phagocytic macrophages. We found that cortical neurons were more susceptible to Aβ42 oligomers than fibrils, triggering additional neuritic arborization retraction, functional alterations (hyperactivity and spike waveform), and loss of VGluT1- and PSD95-excitatory synapses. Co-culturing neurons with bone marrow-derived macrophages protected synapses against Aβ42 fibrils; moreover, immune activation with glatiramer acetate (GA) conferred further protection against oligomers. Mechanisms involved increased Aβ42 removal by macrophages, amplified by GA stimulation: fibrils were largely cleared through intracellular CD36/EEA1+-early endosomal proteolysis, while oligomers were primarily removed via extracellular/MMP-9 enzymatic degradation. In vivo studies in GA-immunized or CD115+-monocyte-grafted APPSWE/PS1ΔE9-transgenic mice followed by pre- and postsynaptic analyses of entorhinal cortex and hippocampal substructures corroborated our in vitro findings of macrophage-mediated synaptic preservation. Together, our data demonstrate that activated macrophages effectively clear Aβ42 oligomers and rescue VGluT1/PSD95 synapses, providing rationale for harnessing macrophages to treat AD.
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- 2020
14. Peripherally derived angiotensin converting enzyme-enhanced macrophages alleviate Alzheimer-related disease.
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Koronyo-Hamaoui, Maya, Sheyn, Julia, Hayden, Eric Y, Li, Songlin, Fuchs, Dieu-Trang, Regis, Giovanna C, Lopes, Dahabada HJ, Black, Keith L, Bernstein, Kenneth E, Teplow, David B, Fuchs, Sebastien, Koronyo, Yosef, and Rentsendorj, Altan
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Dementia ,Neurosciences ,Neurodegenerative ,Acquired Cognitive Impairment ,Aging ,Brain Disorders ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Alzheimer's Disease ,Aetiology ,2.1 Biological and endogenous factors ,Neurological ,Adoptive Transfer ,Alzheimer Disease ,Amyloid beta-Peptides ,Amyloid beta-Protein Precursor ,Angiotensin-Converting Enzyme Inhibitors ,Animals ,Bone Marrow Transplantation ,Brain ,Disease Models ,Animal ,In Vitro Techniques ,Insulin-Like Growth Factor I ,Lisinopril ,Macrophages ,Mice ,Mice ,Transgenic ,Microglia ,Monocytes ,Nitric Oxide Synthase Type II ,Peptide Fragments ,Peptidyl-Dipeptidase A ,Plaque ,Amyloid ,Presenilin-1 ,Tumor Necrosis Factor-alpha ,IGF1 ,TNF alpha ,TREM2 ,EEA1 ,innate immunity ,TNFα ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Neurology & Neurosurgery - Abstract
Targeted overexpression of angiotensin-converting enzyme (ACE), an amyloid-β protein degrading enzyme, to brain resident microglia and peripheral myelomonocytes (ACE10 model) substantially diminished Alzheimer's-like disease in double-transgenic APPSWE/PS1ΔE9 (AD+) mice. In this study, we explored the impact of selective and transient angiotensin-converting enzyme overexpression on macrophage behaviour and the relative contribution of bone marrow-derived ACE10 macrophages, but not microglia, in attenuating disease progression. To this end, two in vivo approaches were applied in AD+ mice: (i) ACE10/GFP+ bone marrow transplantation with head shielding; and (ii) adoptive transfer of CD115+-ACE10/GFP+ monocytes to the peripheral blood. Extensive in vitro studies were further undertaken to establish the unique ACE10-macrophage phenotype(s) in response to amyloid-β1-42 fibrils and oligomers. The combined in vivo approaches showed that increased cerebral infiltration of ACE10 as compared to wild-type monocytes (∼3-fold increase; P < 0.05) led to reductions in cerebral soluble amyloid-β1-42, vascular and parenchymal amyloid-β deposits, and astrocytosis (31%, 47-80%, and 33%, respectively; P < 0.05-0.0001). ACE10 macrophages surrounded brain and retinal amyloid-β plaques and expressed 3.2-fold higher insulin-like growth factor-1 (P < 0.01) and ∼60% lower tumour necrosis factor-α (P < 0.05). Importantly, blood enrichment with CD115+-ACE10 monocytes in symptomatic AD+ mice resulted in pronounced synaptic and cognitive preservation (P < 0.05-0.001). In vitro analysis of macrophage response to well-defined amyloid-β1-42 conformers (fibrils, prion rod-like structures, and stabilized soluble oligomers) revealed extensive resistance to amyloid-β1-42 species by ACE10 macrophages. They exhibited 2-5-fold increased surface binding to amyloid-β conformers as well as substantially more effective amyloid-β1-42 uptake, at least 8-fold higher than those of wild-type macrophages (P < 0.0001), which were associated with enhanced expression of surface scavenger receptors (i.e. CD36, scavenger receptor class A member 1, triggering receptor expressed on myeloid cells 2, CD163; P < 0.05-0.0001), endosomal processing (P < 0.05-0.0001), and ∼80% increased extracellular degradation of amyloid-β1-42 (P < 0.001). Beneficial ACE10 phenotype was reversed by the angiotensin-converting enzyme inhibitor (lisinopril) and thus was dependent on angiotensin-converting enzyme catalytic activity. Further, ACE10 macrophages presented distinct anti-inflammatory (low inducible nitric oxide synthase and lower tumour necrosis factor-α), pro-healing immune profiles (high insulin-like growth factor-1, elongated cell morphology), even following exposure to Alzheimer's-related amyloid-β1-42 oligomers. Overall, we provide the first evidence for therapeutic roles of angiotensin-converting enzyme-overexpressing macrophages in preserving synapses and cognition, attenuating neuropathology and neuroinflammation, and enhancing resistance to defined pathognomonic amyloid-β forms.
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- 2020
15. Author Correction: Blood–brain barrier permeable nano immunoconjugates induce local immune responses for glioma therapy
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Galstyan, Anna, Markman, Janet L, Shatalova, Ekaterina S, Chiechi, Antonella, Korman, Alan J, Patil, Rameshwar, Klymyshyn, Dmytro, Tourtellotte, Warren G, Israel, Liron L, Braubach, Oliver, Ljubimov, Vladimir A, Mashouf, Leila A, Ramesh, Arshia, Grodzinski, Zachary B, Penichet, Manuel L, Black, Keith L, Holler, Eggehard, Sun, Tao, Ding, Hui, Ljubimov, Alexander V, and Ljubimova, Julia Y
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Biomedical and Clinical Sciences ,Immunology - Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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- 2020
16. Exposure to environmental airborne particulate matter caused wide-ranged transcriptional changes and accelerated Alzheimer's-related pathology: A mouse study
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Israel, Liron L., Braubach, Oliver, Shatalova, Ekaterina S., Chepurna, Oksana, Sharma, Sachin, Klymyshyn, Dmytro, Galstyan, Anna, Chiechi, Antonella, Cox, Alysia, Herman, David, Bliss, Bishop, Hasen, Irene, Ting, Amanda, Arechavala, Rebecca, Kleinman, Michael T., Patil, Rameshwar, Holler, Eggehard, Ljubimova, Julia Y., Koronyo-Hamaoui, Maya, Sun, Tao, and Black, Keith L.
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- 2023
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17. Blockade of a laminin-411 - Notch axis with CRISPR/Cas9 or a nanobioconjugate inhibits glioblastoma growth through tumor-microenvironment crosstalk
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Sun, Tao, Patil, Rameshwar, Galstyan, Anna, Klymyshyn, Dmytro, Ding, Hui, Chesnokova, Alexandra, Cavenee, Webster K, Furnari, Frank B, Ljubimov, Vladimir A, Shatalova, Ekaterina S, Wagner, Shawn, Li, Debiao, Mamelak, Adam N, Bannykh, Serguei I, Patil, Chirag G, Rudnick, Jeremy D, Hu, Jethro, Grodzinski, Zachary B, Rekechenetskiy, Arthur, Falahatian, Vida, Lyubimov, Alexander V, Chen, Yongmei L, Leoh, Lai S, Daniels-Wells, Tracy R, Penichet, Manuel L, Holler, Eggehard, Ljubimov, Alexander V, Black, Keith L, and Ljubimova, Julia Y
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Brain Cancer ,Cancer ,Neurosciences ,Rare Diseases ,Brain Disorders ,Stem Cell Research ,Biotechnology ,Stem Cell Research - Nonembryonic - Human ,Animals ,Apoptosis ,Biomarkers ,Tumor ,Brain ,CRISPR-Cas Systems ,Cell Proliferation ,Gene Expression Regulation ,Neoplastic ,Glioblastoma ,Humans ,Laminin ,Mice ,Mice ,Nude ,Nanoparticles ,Neoplastic Stem Cells ,Prognosis ,Receptors ,Notch ,Signal Transduction ,Survival Rate ,Tumor Cells ,Cultured ,Tumor Microenvironment ,Xenograft Model Antitumor Assays ,Oncology and Carcinogenesis ,Oncology & Carcinogenesis - Abstract
There is an unmet need for the treatment of glioblastoma multiforme (GBM). The extracellular matrix, including laminins, in the tumor microenvironment is important for tumor invasion and progression. In a panel of 226 patient brain glioma samples, we found a clinical correlation between the expression of tumor vascular laminin-411 (α4β1γ1) with higher tumor grade and with expression of cancer stem cell (CSC) markers, including Notch pathway members, CD133, Nestin, and c-Myc. Laminin-411 overexpression also correlated with higher recurrence rate and shorter survival of GBM patients. We also showed that depletion of laminin-411 α4 and β1 chains with CRISPR/Cas9 in human GBM cells led to reduced growth of resultant intracranial tumors in mice and significantly increased survival of host animals compared with mice with untreated cells. Inhibition of laminin-411 suppressed Notch pathway in normal and malignant human brain cell types. A nanobioconjugate potentially suitable for clinical use and capable of crossing blood-brain barrier was designed to block laminin-411 expression. Nanobioconjugate treatment of mice carrying intracranial GBM significantly increased animal survival and inhibited multiple CSC markers, including the Notch axis. This study describes an efficient strategy for GBM treatment via targeting a critical component of the tumor microenvironment largely independent of heterogeneous genetic mutations in glioblastoma.Significance: Laminin-411 expression in the glioma microenvironment correlates with Notch and other cancer stem cell markers and can be targeted by a novel, clinically translatable nanobioconjugate to inhibit glioma growth.
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- 2019
18. Blood–brain barrier permeable nano immunoconjugates induce local immune responses for glioma therapy
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Galstyan, Anna, Markman, Janet L, Shatalova, Ekaterina S, Chiechi, Antonella, Korman, Alan J, Patil, Rameshwar, Klymyshyn, Dmytro, Tourtellotte, Warren G, Israel, Liron L, Braubach, Oliver, Ljubimov, Vladimir A, Mashouf, Leila A, Ramesh, Arshia, Grodzinski, Zachary B, Penichet, Manuel L, Black, Keith L, Holler, Eggehard, Sun, Tao, Ding, Hui, Ljubimov, Alexander V, and Ljubimova, Julia Y
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Brain Disorders ,Rare Diseases ,Neurosciences ,Biotechnology ,Cancer ,Brain Cancer ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Animals ,Antineoplastic Agents ,Immunological ,Biopolymers ,Blood-Brain Barrier ,Brain Neoplasms ,CTLA-4 Antigen ,Cell Line ,Tumor ,Disease Models ,Animal ,Female ,Glioma ,Humans ,Immunoconjugates ,Malates ,Mice ,Nanoconjugates ,Permeability ,Physarum polycephalum ,Polymers ,Programmed Cell Death 1 Receptor ,Treatment Outcome - Abstract
Brain glioma treatment with checkpoint inhibitor antibodies to cytotoxic T-lymphocyte-associated antigen 4 (a-CTLA-4) and programmed cell death-1 (a-PD-1) was largely unsuccessful due to their inability to cross blood-brain barrier (BBB). Here we describe targeted nanoscale immunoconjugates (NICs) on natural biopolymer scaffold, poly(β-L-malic acid), with covalently attached a-CTLA-4 or a-PD-1 for systemic delivery across the BBB and activation of local brain anti-tumor immune response. NIC treatment of mice bearing intracranial GL261 glioblastoma (GBM) results in an increase of CD8+ T cells, NK cells and macrophages with a decrease of regulatory T cells (Tregs) in the brain tumor area. Survival of GBM-bearing mice treated with NIC combination is significantly longer compared to animals treated with single checkpoint inhibitor-bearing NICs or free a-CTLA-4 and a-PD-1. Our study demonstrates trans-BBB delivery of tumor-targeted polymer-conjugated checkpoint inhibitors as an effective GBM treatment via activation of both systemic and local privileged brain tumor immune response.
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- 2019
19. Regulating microglial miR-155 transcriptional phenotype alleviates Alzheimer’s-induced retinal vasculopathy by limiting Clec7a/Galectin-3+ neurodegenerative microglia
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Shi, Haoshen, Yin, Zhuoran, Koronyo, Yosef, Fuchs, Dieu-Trang, Sheyn, Julia, Davis, Miyah R., Wilson, Jered W., Margeta, Milica A., Pitts, Kristen M., Herron, Shawn, Ikezu, Seiko, Ikezu, Tsuneya, Graham, Stuart L., Gupta, Vivek K., Black, Keith L., Mirzaei, Mehdi, Butovsky, Oleg, and Koronyo-Hamaoui, Maya
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- 2022
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20. Nanoparticles crossing blood–brain barrier need specific design for normal, neurodegenerative or cancerous brain conditions.
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Ljubimova, Julia Y, Holler, Eggehard, Black, Keith L, and Ljubimov, Alexander V
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- 2024
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21. Coarse particulate matter (PM2.5-10) in Los Angeles Basin air induces expression of inflammation and cancer biomarkers in rat brains.
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Ljubimova, Julia Y, Braubach, Oliver, Patil, Rameshwar, Chiechi, Antonella, Tang, Jie, Galstyan, Anna, Shatalova, Ekaterina S, Kleinman, Michael T, Black, Keith L, and Holler, Eggehard
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Animals ,Rats ,Encephalitis ,Brain Neoplasms ,Nickel ,Air Pollutants ,Spectrophotometry ,Atomic ,Gene Expression Profiling ,Sequence Analysis ,RNA ,Organ Specificity ,Gene Expression Regulation ,Brain Chemistry ,Particle Size ,Time Factors ,Los Angeles ,Particulate Matter ,Biomarkers ,Tumor - Abstract
Air pollution is linked to brain inflammation, which accelerates tumorigenesis and neurodegeneration. The molecular mechanisms that connect air pollution with brain pathology are largely unknown but seem to depend on the chemical composition of airborne particulate matter (PM). We sourced ambient PM from Riverside, California, and selectively exposed rats to coarse (PM2.5-10: 2.5-10 µm), fine (PM
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- 2018
22. ZEB1 Is a Transcription Factor That Is Prognostic and Predictive in Diffuse Gliomas
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Edwards, Lincoln A, Kim, Sungjin, Madany, Mecca, Nuno, Miriam, Thomas, Tom, Li, Aiguo, Berel, Dror, Lee, Bong-Sup, Liu, Minzhi, Black, Keith L, Fan, Xuemo, Zhang, Wei, and Yu, John S
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Brain Disorders ,Cancer ,Clinical Research ,Genetics ,Rare Diseases ,Brain Cancer ,Human Genome ,Neurosciences ,Management of diseases and conditions ,4.2 Evaluation of markers and technologies ,Detection ,screening and diagnosis ,7.3 Management and decision making ,ZEB1 ,copy number ,decision curve analysis ,diffuse gliomas ,glioma stem cells ,Psychology ,Clinical sciences ,Biological psychology - Abstract
Objective: To address the unmet medical need to better prognosticate patients with diffuse gliomas and to predict responses to chemotherapy regimens. Methods: ZEB1 alterations were retrospectively identified from a cohort of 1,160 diffuse glioma patients. Epigenome-wide association scans (EWAS) were performed on available data. We determined the utility of ZEB1 as a prognostic indicator of patient survival in diffuse gliomas and assessed the value of ZEB1 to predict the efficacy of treating diffuse glioma patients with procarbazine, CCNU, and vincristine along with radiation at diagnosis. Decision curve analysis (DCA) was used to determine if ZEB1 added benefit to clinical decision-making over and above conventional methods. Results: Fifteen percent of diffuse glioma patients had a ZEB1 deletion. ZEB1 deletion was associated with poor overall survival (OS) with and without adjustment for age and tumor grade (adjusted HR: 4.25; 95% CI: 2.35 to 7.66; P < 0.001). Decision curve analysis confirmed that ZEB1 status with or without IDH1 was more beneficial to clinical decision making than conventional information such as age and tumor grade. We showed that ZEB1 regulates TERT expression, and patients with ZEB1 deletions likely subsume patients with mutant TERT expression in diffuse gliomas. ZEB1 influenced clinical decision making to initiate procarbazine, CCNU, and vincristine treatment. Conclusion: We demonstrate the prognostic value of ZEB1 in diffuse glioma patients. We further determine ZEB1 to be a vital and influential molecular marker in clinical decisions that exceed conventional methods regarding whether to treat or not treat patients with diffuse glioma.
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- 2018
23. A novel role for osteopontin in macrophage-mediated amyloid-β clearance in Alzheimer’s models
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Rentsendorj, Altan, Sheyn, Julia, Fuchs, Dieu-Trang, Daley, David, Salumbides, Brenda C, Schubloom, Hannah E, Hart, Nadav J, Li, Songlin, Hayden, Eric Y, Teplow, David B, Black, Keith L, Koronyo, Yosef, and Koronyo-Hamaoui, Maya
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Biomedical and Clinical Sciences ,Immunology ,Dementia ,Acquired Cognitive Impairment ,Neurosciences ,Brain Disorders ,Aetiology ,2.1 Biological and endogenous factors ,Alzheimer Disease ,Amyloid beta-Peptides ,Animals ,Brain ,Disease Models ,Animal ,Encephalitis ,Female ,Macrophages ,Male ,Mice ,Inbred C57BL ,Mice ,Transgenic ,Monocytes ,Osteopontin ,Phagocytosis ,Up-Regulation ,Neurodegeneration ,Neuroinflammation ,SPP1 ,ETA-1 ,Vascular amyloid ,Psychology ,Neurology & Neurosurgery ,Biological psychology - Abstract
Osteopontin (OPN), a matricellular immunomodulatory cytokine highly expressed by myelomonocytic cells, is known to regulate immune cell migration, communication, and response to brain injury. Enhanced cerebral recruitment of monocytes achieved through glatiramer acetate (GA) immunization or peripheral blood enrichment with bone marrow (BM)-derived CD115+ monocytes (MoBM) curbs amyloid β-protein (Aβ) neuropathology and preserves cognitive function in murine models of Alzheimer's disease (ADtg mice). To elucidate the beneficial mechanisms of these immunomodulatory approaches in AD, we focused on the potential role of OPN in macrophage-mediated Aβ clearance. Here, we found extensive OPN upregulation along with reduction of vascular and parenchymal Aβ burden in cortices and hippocampi of GA-immunized ADtg mice. Treatment combining GA with blood-grafted MoBM further increased OPN levels surrounding residual Aβ plaques. In brains from AD patients and ADtg mice, OPN was also elevated and predominantly expressed by infiltrating GFP+- or Iba1+-CD45high monocyte-derived macrophages engulfing Aβ plaques. Following GA immunization, we detected a significant increase in a subpopulation of inflammatory blood monocytes (CD115+CD11b+Ly6Chigh) expressing OPN, and subsequently, an elevated population of OPN-expressing CD11b+Ly6C+CD45high monocyte/macrophages in the brains of these ADtg mice. Correlogram analyses indicate a strong linear correlation between cerebral OPN levels and macrophage infiltration, as well as a tight inverse relation between OPN and Aβ-plaque burden. In vitro studies corroborate in vivo findings by showing that GA directly upregulates OPN expression in BM-derived macrophages (MФBM). Further, OPN promotes a phenotypic shift that is highly phagocytic (increased uptake of Aβ fibrils and surface scavenger receptors) and anti-inflammatory (altered cell morphology, reduced iNOS, and elevated IL-10 and Aβ-degrading enzyme MMP-9). Inhibition of OPN expression in MФBM, either by siRNA, knockout (KOOPN), or minocycline, impairs uptake of Aβ fibrils and hinders GA's neuroprotective effects on macrophage immunological profile. Addition of human recombinant OPN reverses the impaired Aβ phagocytosis in KOOPN-MФBM. This study demonstrates that OPN has an essential role in modulating macrophage immunological profile and their ability to resist pathogenic forms of Aβ.
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- 2018
24. Basal Forebrain Volume, but Not Hippocampal Volume, Is a Predictor of Global Cognitive Decline in Patients With Alzheimer's Disease Treated With Cholinesterase Inhibitors
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Teipel, Stefan J, Cavedo, Enrica, Hampel, Harald, Grothe, Michel J, Initiative, Alzheimer's Disease Neuroimaging, Initiative, Alzheimer Precision Medicine, Aguilar, Lisi Flores, Babiloni, Claudio, Baldacci, Filippo, Benda, Norbert, Black, Keith L, Bokde, Arun LW, Bonuccelli, Ubaldo, Broich, Karl, Bun, René S, Cacciola, Francesco, Castrillo, Juan, Ceravolo, Roberto, chiesa, Patrizia A, Colliot, Olivier, Coman, Cristina-Maria, Corvol, Jean-Christophe, Cuello, Augusto Claudio, Cummings, Jeffrey L, Depypere, Herman, Dubois, Bruno, Duggento, Andrea, Durrleman, Stanley, Escott-price, Valentina, Federoff, Howard, Ferretti, Maria Teresa, Fiandaca, Massimo, Frank, Richard A, Garaci, Francesco, Genthon, Remy, George, Nathalie, Giorgi, Filippo S, Graziani, Manuela, Haberkamp, Marion, Habert, Marie-Odile, Herholz, Karl, Karran, Eric, Seung, H KIM, Koronyo, Yosef, Koronyo-Hamaoui, Maya, Lamari, Foudil, Langevin, Todd, Lehéricy, Stéphane, Lista, Simone, Lorenceau, Jean, Mapstone, Mark, Neri, Christian, Nisticò, Robert, Nyasse-Messene, Francis, O'Bryant, Sid E, Perry, George, Ritchie, Craig, Rojkova, Katrine, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S, Sporns, Olaf, Toschi, Nicola, Verdooner, Steven R, Vergallo, Andrea, Villain, Nicolas, Welikovitch, Lindsay A, Woodcock, Janet, and Younesi, Erfan
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Biological Psychology ,Psychology ,Neurosciences ,Brain Disorders ,Dementia ,Neurodegenerative ,Clinical Research ,Acquired Cognitive Impairment ,Behavioral and Social Science ,Alzheimer's Disease ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Aging ,Neurological ,Alzheimer's Disease Neuroimaging Initiative ,Alzheimer Precision Medicine Initiative ,MRI ,basal forebrain ,cholinergic treatment ,executive function ,hippocampus ,memory ,prediction ,Clinical Sciences ,Clinical sciences ,Biological psychology - Abstract
Background: Predicting the progression of cognitive decline in Alzheimer's disease (AD) is important for treatment selection and patient counseling. Structural MRI markers such as hippocampus or basal forebrain volumes might represent useful instruments for the prediction of cognitive decline. The primary objective was to determine the predictive value of hippocampus and basal forebrain volumes for global and domain specific cognitive decline in AD dementia during cholinergic treatment. Methods: We used MRI and cognitive data from 124 patients with the clinical diagnosis of AD dementia, derived from the ADNI-1 cohort, who were on standard of care cholinesterase inhibitor treatment during a follow-up period between 0.4 and 3.1 years. We used linear mixed effects models with cognitive function as outcome to assess the main effects as well as two-way interactions between baseline volumes and time controlling for age, sex, and total intracranial volume. This model accounts for individual variation in follow-up times. Results: Basal forebrain volume, but not hippocampus volume, was a significant predictor of rates of global cognitive decline. Larger volumes were associated with smaller rates of cognitive decline. Left hippocampus volume had a modest association with rates of episodic memory decline. Baseline performance in global cognition and memory was significantly associated with hippocampus and basal forebrain volumes; in addition, basal forebrain volume was associated with baseline performance in executive function. Conclusions: Our findings indicate that in AD dementia patients, basal forebrain volume may be a useful marker to predict subsequent cognitive decline during cholinergic treatment.
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- 2018
25. 235 IL-4/13 Blocking Peptide (KROS-401) Inhibits M2 Macrophage Polarization in vitro and Demonstrates Anti-tumor Activity in a Murine Model of Glioblastoma
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Michel, Michelot, primary, Israel, Liron, additional, Tusa Lavieri, Miguel Eduardo, additional, Wang, Hongqiang, additional, Miyaguchi, Ken, additional, Mohyeddinipour, Sarah, additional, Watanabe, Junji, additional, Black, Keith L., additional, Murali, Ramachandran, additional, and Yu, John, additional
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- 2024
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26. Advances in Retinal Imaging: Retinal Amyloid Imaging
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Koronyo-Hamaoui, Maya, Doustar, Jonah, Oviatt, Mia, Black, Keith L., Koronyo, Yosef, Grzybowski, Andrzej, editor, and Barboni, Piero, editor
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- 2020
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27. Simultaneous blockade of interacting CK2 and EGFR pathways by tumor-targeting nanobioconjugates increases therapeutic efficacy against glioblastoma multiforme
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Chou, Szu-Ting, Patil, Rameshwar, Galstyan, Anna, Gangalum, Pallavi R, Cavenee, Webster K, Furnari, Frank B, Ljubimov, Vladimir A, Chesnokova, Alexandra, Kramerov, Andrei A, Ding, Hui, Falahatian, Vida, Mashouf, Leila, Fox, Irving, Black, Keith L, Holler, Eggehard, Ljubimov, Alexander V, and Ljubimova, Julia Y
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Bioengineering ,Neurosciences ,Rare Diseases ,Brain Disorders ,Cancer ,Brain Cancer ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Adult ,Animals ,Antibodies ,Monoclonal ,Antineoplastic Agents ,Blood-Brain Barrier ,Brain Neoplasms ,Casein Kinase II ,Cell Line ,Tumor ,ErbB Receptors ,Female ,Glioblastoma ,Humans ,Malates ,Mice ,Mice ,Nude ,Nanoconjugates ,Neoplastic Stem Cells ,Oligonucleotides ,Antisense ,Polyethylene Glycols ,Polymers ,Signal Transduction ,Surface Properties ,Glioblastoma multiforme ,Dual antisense oligonucleotide-dual antibody nanobioconjugate ,Blood-brain barrier delivery ,Protein kinase CK2 ,EGFR/EGFRvIII ,Biomedical Engineering ,Chemical Engineering ,Pharmacology and Pharmaceutical Sciences ,Pharmacology & Pharmacy ,Pharmacology and pharmaceutical sciences ,Biomedical engineering - Abstract
Glioblastoma multiforme (GBM) remains the deadliest brain tumor in adults. GBM tumors are also notorious for drug and radiation resistance. To inhibit GBMs more effectively, polymalic acid-based blood-brain barrier crossing nanobioconjugates were synthesized that are delivered to the cytoplasm of cancer cells and specifically inhibit the master regulator serine/threonine protein kinase CK2 and the wild-type/mutated epidermal growth factor receptor (EGFR/EGFRvIII), which are overexpressed in gliomas according to The Cancer Genome Atlas (TCGA) GBM database. Two xenogeneic mouse models bearing intracranial human GBMs from cell lines LN229 and U87MG that expressed both CK2 and EGFR at different levels were used. Simultaneous knockdown of CK2α and EGFR/EGFRvIII suppressed their downstream prosurvival signaling. Treatment also markedly reduced the expression of programmed death-ligand 1 (PD-L1), a negative regulator of cytotoxic lymphocytes. Downregulation of CK2 and EGFR also caused deactivation of heat shock protein 90 (Hsp90) co-chaperone Cdc37, which may suppress the activity of key cellular kinases. Inhibition of either target was associated with downregulation of the other target as well, which may underlie the increased efficacy of the dual nanobioconjugate that is directed against both CK2 and EGFR. Importantly, the single nanodrugs, and especially the dual nanodrug, markedly suppressed the expression of the cancer stem cell markers c-Myc, CD133, and nestin, which could contribute to the efficacy of the treatments. In both tumor models, the nanobioconjugates significantly increased (up to 2-fold) animal survival compared with the PBS-treated control group. The versatile nanobioconjugates developed in this study, with the abilities of anti-cancer drug delivery across biobarriers and the inhibition of key tumor regulators, offer a promising nanotherapeutic approach to treat GBMs, and to potentially prevent drug resistance and retard the recurrence of brain tumors.
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- 2016
28. Association of plasma YKL-40 with brain amyloid-β levels, memory performance, and sex in subjective memory complainers
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Bakardjian, Hovagim, Benali, Habib, Bertin, Hugo, Bonheur, Joel, Boukadida, Laurie, Boukerrou, Nadia, Cavedo, Enrica, Chiesa, Patrizia, Colliot, Olivier, Dubois, Bruno, Dubois, Marion, Epelbaum, Stéphane, Gagliardi, Geoffroy, Genthon, Remy, Habert, Marie-Odile, Hampel, Harald, Houot, Marion, Kas, Aurélie, Lamari, Foudil, Levy, Marcel, Lista, Simone, Metzinger, Christiane, Mochel, Fanny, Nyasse, Francis, Poisson, Catherine, Potier, Marie-Claude, Revillon, Marie, Santos, Antonio, Andrade, Katia Santos, Sole, Marine, Surtee, Mohmed, de Schotten, Michel Thiebaut, Vergallo, Andrea, Younsi, Nadjia, Afshar, Mohammad, Aguilar, Lisi Flores, Akman-Anderson, Leyla, Arenas, Joaquín, Ávila, Jesús, Babiloni, Claudio, Baldacci, Filippo, Batrla, Richard, Benda, Norbert, Black, Keith L., Bokde, Arun L.W., Bonuccelli, Ubaldo, Broich, Karl, Cacciola, Francesco, Caraci, Filippo, Caruso, Giuseppe, Castrillo†, Juan, Ceravolo, Roberto, Chiesa, Patrizia A., Corbo, Massimo, Corvol, Jean-Christophe, Cuello, Augusto Claudio, Cummings, Jeffrey L., Depypere, Herman, Duggento, Andrea, Emanuele, Enzo, Escott-Price, Valentina, Federoff, Howard, Ferretti, Maria Teresa, Fiandaca, Massimo, Frank, Richard A., Garaci, Francesco, Geerts, Hugo, Giacobini, Ezio, Giorgi, Filippo S., Goetzl, Edward J., Graziani, Manuela, Haberkamp, Marion, Hänisch, Britta, Herholz, Karl, Hernandez, Felix, Imbimbo, Bruno P., Kapogiannis, Dimitrios, Karran, Eric, Kiddle, Steven J., Kim, Seung H., Koronyo, Yosef, Koronyo-Hamaoui, Maya, Langevin, Todd, Lehéricy, Stéphane, Lemercier, Pablo, Llavero, Francisco, Lorenceau, Jean, Lucía, Alejandro, Mango, Dalila, Mapstone, Mark, Neri, Christian, Nisticò, Robert, O’bryant, Sid E., Palermo, Giovanni, Perry, George, Ritchie, Craig, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S., Sporns, Olaf, Toschi, Nicola, Valenzuela, Pedro L., Vellas, Bruno, Verdooner, Steven R., Villain, Nicolas, Giudici, Kelly Virecoulon, Watling, Mark, Welikovitch, Lindsay A., Woodcock, Janet, Younesi, Erfan, Zugaza, José L., Zetterberg, Henrik, and Blennow, Kaj
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- 2020
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29. Antigen-specific age-related memory CD8 T cells induce and track Alzheimer's-like neurodegeneration.
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Panwar, Akanksha, Rentsendorj, Altan, Jhun, Michelle, Cohen, Robert M., Cordner, Ryan, Gull, Nicole, Pechnick, Robert N., Duvall, Gretchen, Mardiros, Armen, Golchian, David, Schubloom, Hannah, Lee-Way Jin, Van Dam, Debby, Vermeiren, Yannick, De Reu, Hans, De Deyn, Peter Paul, Raskatov, Jevgenij A., Black, Keith L., Irvin, Dwain K., and Williams, Brian A.
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ALZHEIMER'S disease ,T cells ,IMMUNOLOGIC memory ,NEURODEGENERATION ,BRAIN injuries - Abstract
Cerebral (Aβ) plaque and (pTau) tangle deposition are hallmarks of Alzheimer's disease (AD), yet are insufficient to confer complete AD-like neurodegeneration experimentally. Factors acting upstream of Aβ/pTau in AD remain unknown, but their identification could enable earlier diagnosis and more effective treatments. T cell abnormalities are emerging AD hallmarks, and CD8 T cells were recently found to mediate neurodegeneration downstream of tangle deposition in hereditary neurodegeneration models. The precise impact of T cells downstream of Aβ/pTau, however, appears to vary depending on the animal model. Our prior work suggested that antigen-specific memory CD8 T ("hiT") cells act upstream of Aβ/pTau after brain injury. Here, we examine whether hiT cells influence sporadic AD-like pathophysiology upstream of Aβ/pTau. Examining neuropathology, gene expression, and behavior in our hiT mouse model we show that CD8 T cells induce plaque and tangle-like deposition, modulate AD-related genes, and ultimately result in progressive neurodegeneration with both gross and fine features of sporadic human AD. T cells required Perforin to initiate this pathophysiology, and IFNγ for most gene expression changes and progression to more widespread neurodegenerative disease. Analogous antigen-specific memory CD8 T cells were significantly elevated in the brains of human AD patients, and their loss from blood corresponded to sporadic AD and related cognitive decline better than plasma pTau-217, a promising AD biomarker candidate. We identify an age-related factor acting upstream of Aβ/pTau to initiate AD-like pathophysiology, the mechanisms promoting its pathogenicity, and its relevance to human sporadic AD. [ABSTRACT FROM AUTHOR]
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- 2024
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30. A phase I trial of surgical resection with Gliadel Wafer placement followed by vaccination with dendritic cells pulsed with tumor lysate for patients with malignant glioma
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Rudnick, Jeremy D., Sarmiento, J. Manuel, Uy, Benjamin, Nuno, Miriam, Wheeler, Christopher J., Mazer, Mia J., Wang, Hongqiang, Hu, Jethro L., Chu, Ray M., Phuphanich, Surasak, Black, Keith L., and Yu, John S.
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- 2020
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31. Distinctive retinal peri-arteriolar versus peri-venular amyloid plaque distribution correlates with the cognitive performance
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Dumitrascu, Oana M., primary, Doustar, Jonah, additional, Fuchs, Dieu-Trang, additional, Koronyo, Yosef, additional, Sherman, Dale S., additional, Miller, Michelle Shizu, additional, Johnson, Kenneth O., additional, Carare, Roxana O., additional, Verdooner, Steven R., additional, Lyden, Patrick D., additional, Schneider, Julie A., additional, Black, Keith L., additional, and Koronyo-Hamaoui, Maya, additional
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- 2024
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32. Identification of retinal tau oligomers, citrullinated tau, and other tau isoforms in early and advanced AD and relations to disease status
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Shi, Haoshen, primary, Mirzaei, Nazanin, additional, Koronyo, Yosef, additional, Davis, Miyah R., additional, Robinson, Edward, additional, Braun, Gila M., additional, Jallow, Ousman, additional, Rentsendorj, Altan, additional, Ramanujan, V Krishnan, additional, Fert-Bober, Justyna, additional, Kramerov, Andrei A., additional, Ljubimov, Alexander V., additional, Schneider, Lon S., additional, Tourtellotte, Warren G., additional, Hawes, Debra, additional, Schneider, Julie A., additional, Black, Keith L., additional, Kayed, Rakez, additional, Selenica, Maj-Linda B., additional, Lee, Daniel C., additional, Fuchs, Dieu-Trang, additional, and Koronyo-Hamaoui, Maya, additional
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- 2024
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33. Antigen-specific age-related memory CD8 T cells induce and track Alzheimer’s-like neurodegeneration
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Panwar, Akanksha, primary, Rentsendorj, Altan, additional, Jhun, Michelle, additional, Cohen, Robert M., additional, Cordner, Ryan, additional, Gull, Nicole, additional, Pechnick, Robert N., additional, Duvall, Gretchen, additional, Mardiros, Armen, additional, Golchian, David, additional, Schubloom, Hannah, additional, Jin, Lee-Way, additional, Van Dam, Debby, additional, Vermeiren, Yannick, additional, De Reu, Hans, additional, De Deyn, Peter Paul, additional, Raskatov, Jevgenij A., additional, Black, Keith L., additional, Irvin, Dwain K., additional, Williams, Brian A., additional, and Wheeler, Christopher J., additional
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- 2024
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34. Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma
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Ceccarelli, Michele, Barthel, Floris P, Malta, Tathiane M, Sabedot, Thais S, Salama, Sofie R, Murray, Bradley A, Morozova, Olena, Newton, Yulia, Radenbaugh, Amie, Pagnotta, Stefano M, Anjum, Samreen, Wang, Jiguang, Manyam, Ganiraju, Zoppoli, Pietro, Ling, Shiyun, Rao, Arjun A, Grifford, Mia, Cherniack, Andrew D, Zhang, Hailei, Poisson, Laila, Carlotti, Carlos Gilberto, da Cunha Tirapelli, Daniela Pretti, Rao, Arvind, Mikkelsen, Tom, Lau, Ching C, Yung, WK Alfred, Rabadan, Raul, Huse, Jason, Brat, Daniel J, Lehman, Norman L, Barnholtz-Sloan, Jill S, Zheng, Siyuan, Hess, Kenneth, Rao, Ganesh, Meyerson, Matthew, Beroukhim, Rameen, Cooper, Lee, Akbani, Rehan, Wrensch, Margaret, Haussler, David, Aldape, Kenneth D, Laird, Peter W, Gutmann, David H, Network, TCGA Research, Arachchi, Harindra, Auman, J Todd, Balasundaram, Miruna, Balu, Saianand, Barnett, Gene, Baylin, Stephen, Bell, Sue, Benz, Christopher, Bir, Natalie, Black, Keith L, Bodenheimer, Tom, Boice, Lori, Bootwalla, Moiz S, Bowen, Jay, Bristow, Christopher A, Butterfield, Yaron SN, Chen, Qing-Rong, Chin, Lynda, Cho, Juok, Chuah, Eric, Chudamani, Sudha, Coetzee, Simon G, Cohen, Mark L, Colman, Howard, Couce, Marta, D’Angelo, Fulvio, Davidsen, Tanja, Davis, Amy, Demchok, John A, Devine, Karen, Ding, Li, Duell, Rebecca, Elder, J Bradley, Eschbacher, Jennifer M, Fehrenbach, Ashley, Ferguson, Martin, Frazer, Scott, Fuller, Gregory, Fulop, Jordonna, Gabriel, Stacey B, Garofano, Luciano, Gastier-Foster, Julie M, Gehlenborg, Nils, Gerken, Mark, Getz, Gad, Giannini, Caterina, Gibson, William J, Hadjipanayis, Angela, Hayes, D Neil, Heiman, David I, Hermes, Beth, Hilty, Joe, Hoadley, Katherine A, Hoyle, Alan P, and Huang, Mei
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Biological Sciences ,Biomedical and Clinical Sciences ,Bioinformatics and Computational Biology ,Genetics ,Oncology and Carcinogenesis ,Orphan Drug ,Brain Cancer ,Brain Disorders ,Biotechnology ,Human Genome ,Rare Diseases ,Neurosciences ,Cancer ,Adult ,Brain Neoplasms ,Cell Proliferation ,Cluster Analysis ,DNA Helicases ,DNA Methylation ,Epigenesis ,Genetic ,Glioma ,Humans ,Isocitrate Dehydrogenase ,Middle Aged ,Mutation ,Nuclear Proteins ,Promoter Regions ,Genetic ,Signal Transduction ,Telomerase ,Telomere ,Transcriptome ,X-linked Nuclear Protein ,TCGA Research Network ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Therapy development for adult diffuse glioma is hindered by incomplete knowledge of somatic glioma driving alterations and suboptimal disease classification. We defined the complete set of genes associated with 1,122 diffuse grade II-III-IV gliomas from The Cancer Genome Atlas and used molecular profiles to improve disease classification, identify molecular correlations, and provide insights into the progression from low- to high-grade disease. Whole-genome sequencing data analysis determined that ATRX but not TERT promoter mutations are associated with increased telomere length. Recent advances in glioma classification based on IDH mutation and 1p/19q co-deletion status were recapitulated through analysis of DNA methylation profiles, which identified clinically relevant molecular subsets. A subtype of IDH mutant glioma was associated with DNA demethylation and poor outcome; a group of IDH-wild-type diffuse glioma showed molecular similarity to pilocytic astrocytoma and relatively favorable survival. Understanding of cohesive disease groups may aid improved clinical outcomes.
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- 2016
35. Spatial interplay between synaptic loss, UCH‐L1 deficiency, and pTau accumulation in the retina of MCI and AD patients
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Rentsendorj, Altan, primary, Jallow, Ousman, additional, Fuchs, Dieu‐Trang, additional, Sheyn, Julia, additional, Gaire, Bhakta Prasad, additional, Davis, Miyah R, additional, Shi, Haoshen, additional, Black, Keith L, additional, Koronyo, Yosef, additional, and Koronyo‐Hamaoui, Maya, additional
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- 2023
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36. Identification of diverse pathological Tau forms in the retina of MCI and AD patients
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Shi, Haoshen, primary, Mirzaei, Nazanin, additional, Davis, Miyah R, additional, Koronyo, Yosef, additional, Fuchs, Dieu‐Trang, additional, Sheyn, Julia, additional, Jallow, Ousman, additional, Kramerov, Andrei A, additional, Ljubimov, Alexander V, additional, Kayed, Rakez, additional, Miller, Carol A, additional, Black, Keith L, additional, and Koronyo‐Hamaoui, Maya, additional
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- 2023
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37. Microbial infection and associated inflammasome in the retina of Alzheimer’s disease patients
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Gaire, Bhakta Prasad, primary, Koronyo, Yosef, additional, Rentsendorj, Altan, additional, Fuchs, Dieu‐Trang, additional, Subedi, Lalita, additional, Jallow, Ousman, additional, Black, Keith L, additional, Arditi, Moshe, additional, Crother, Timothy R, additional, and Koronyo‐Hamaoui, Maya, additional
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- 2023
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38. Color and contrast vision in mouse models of aging and Alzheimer’s disease using a novel visual-stimuli four-arm maze
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Vit, Jean-Philippe, Fuchs, Dieu-Trang, Angel, Ariel, Levy, Aharon, Lamensdorf, Itschak, Black, Keith L., Koronyo, Yosef, and Koronyo-Hamaoui, Maya
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- 2021
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39. Brain Aβ load association and sexual dimorphism of plasma BACE1 concentrations in cognitively normal individuals at risk for AD
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Bakardjian, H., Benali, H., Bertin, H., Bonheur, J., Boukadida, L., Boukerrou, N., Cavedo, E., Chiesa, P., Colliot, O., Dubois, B., Dubois, M., Epelbaum, S., Gagliardi, G., Genthon, R., Habert, M.O., Hampel, H., Houot, M., Kas, A., Lamari, F., Levy, M., Lista, S., Metzinger, C., Mochel, F., Nyasse, F., Poisson, C., Potier, M.C., Revillon, M., Santos, A., Andrade, K.S., Sole, M., Surtee, M., Thiebaud de Schotten, M., Vergallo, A., Younsi, N., Afshar, Mohammad, Flores Aguilar, Lisi, Akman-Anderson, Leyla, Arenas, Joaquín, Avila, Jesus, Babiloni, Claudio, Baldacci, Filippo, Batrla, Richard, Benda, Norbert, Black, Keith L., Bokde, Arun L.W., Bonuccelli, Ubaldo, Broich, Karl, Cacciola, Francesco, Caraci, Filippo, Castrillo, Juan, Cavedo, Enrica, Ceravolo, Roberto, Chiesa, Patrizia A., Corvol, Jean-Christophe, Claudio Cuello, Augusto, Cummings, Jeffrey L., Depypere, Herman, Dubois, Bruno, Duggento, Andrea, Emanuele, Enzo, Escott-Price, Valentina, Federoff, Howard, Teresa Ferretti, Maria, Fiandaca, Massimo, Frank, Richard A., Garaci, Francesco, Geerts, Hugo, Giorgi, Filippo S., Goetzl, Edward J., Graziani, Manuela, Haberkamp, Marion, Marie-Odile, Habert, Hampel, Harald, Herholz, Karl, Hernandez, Felix, Kapogiannis, Dimitrios, Karran, Eric, Kiddle, Steven J., Kim, Seung H., Koronyo, Yosef, Koronyo-Hamaoui, Maya, Langevin, Todd, Lehéricy, Stéphane, Lucía, Alejandro, Lista, Simone, Lorenceau, Jean, Mango, Dalila, Mapstone, Mark, Neri, Christian, Nisticò, Robert, O'Bryant, Sid E., Palermo, Giovanni, Perry, George, Ritchie, Craig, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S., Sporns, Olaf, Toschi, Nicola, Verdooner, Steven R., Vergallo, Andrea, Villain, Nicolas, Welikovitch, Lindsay A., Woodcock, Janet, Younesi, Erfan, Houot, Marion, Lemercier, Pablo, Vanmechelen, Eugeen, De Vos, Ann, Habert, Marie-Odile, and Potier, Marie-Claude
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- 2019
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40. Differential default mode network trajectories in asymptomatic individuals at risk for Alzheimer's disease
- Author
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Bakardjian, Hovagim, Benali, Habib, Bertin, Hugo, Bonheur, Joel, Boukadida, Laurie, Boukerrou, Nadia, Cavedo, Enrica, Chiesa, Patrizia, Colliot, Olivier, Dubois, Bruno, Dubois, Marion, Epelbaum, Stéphane, Gagliardi, Geoffroy, Genthon, Remy, Habert, Marie-Odile, Hampel, Harald, Houot, Marion, Kas, Aurélie, Lamari, Foudil, Levy, Marcel, Lista, Simone, Metzinger, Christiane, Mochel, Fanny, Nyasse, Francis, Poisson, Catherine, Potier, Marie-Claude, Revillon, Marie, Santos, Antonio, Andrade, Katia Santos, Sole, Marine, Surtee, Mohmed, de Schotten, Michel Thiebaud, Vergallo, Andrea, Younsi, Nadjia, Afshar, Mohammad, Aguilar, Lisi Flores, Akman-Anderson, Leyla, Arenas, Joaquín, Avila, Jesus, Babiloni, Claudio, Baldacci, Filippo, Batrla, Richard, Benda, Norbert, Black, Keith L., Bokde, Arun L.W., Bonuccelli, Ubaldo, Broich, Karl, Cacciola, Francesco, Caraci, Filippo, Castrillo, Juan, Ceravolo, Roberto, Chiesa, Patrizia A., Corvol, Jean-Christophe, Cuello, Augusto Claudio, Cummings, Jeffrey L., Depypere, Herman, Duggento, Andrea, Emanuele, Enzo, Escott-Price, Valentina, Federoff, Howard, Ferretti, Maria Teresa, Fiandaca, Massimo, Frank, Richard A., Garaci, Francesco, Geerts, Hugo, Giorgi, Filippo S., Goetzl, Edward J., Graziani, Manuela, Haberkamp, Marion, Herholz, Karl, Hernandez, Felix, Kapogiannis, Dimitrios, Karran, Eric, Kiddle, Steven J., Kim, Seung H., Koronyo, Yosef, Koronyo-Hamaoui, Maya, Langevin, Todd, Lehéricy, Stéphane, Lucía, Alejandro, Lorenceau, Jean, Mango, Dalila, Mapstone, Mark, Neri, Christian, Nisticó, Robert, O’Bryant, Sid E., Palermo, Giovanni, Perry, George, Ritchie, Craig, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S., Sporns, Olaf, Toschi, Nicola, Verdooner, Steven R., Villain, Nicolas, Welikovitch, Lindsay A., Woodcock, Janet, Younesi, Erfan, and Thiebaut de Schotten, Michel
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- 2019
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41. Polymalic acid chlorotoxin nanoconjugate for near-infrared fluorescence guided resection of glioblastoma multiforme
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Patil, Rameshwar, Galstyan, Anna, Sun, Tao, Shatalova, Ekaterina S., Butte, Pramod, Mamelak, Adam N., Carico, Christine, Kittle, David S., Grodzinski, Zachary B., Chiechi, Antonella, Ding, Hui, Black, Keith L., Ljubimova, Julia Y., and Holler, Eggehard
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- 2019
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42. Plasma amyloid β 40/42 ratio predicts cerebral amyloidosis in cognitively normal individuals at risk for Alzheimer's disease
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Bakardjian, H., Benali, H., Bertin, H., Bonheur, J., Boukadida, L., Boukerrou, N., Cavedo, E., Chiesa, P., Colliot, O., Dubois, B., Dubois, M., Epelbaum, S., Gagliardi, G., Genthon, R., Habert, M.O., Hampel, H., Houot, M., Kas, A., Lamari, F., Levy, M., Lista, S., Metzinger, C., Mochel, F., Nyasse, F., Poisson, C., Potier, M.C., Revillon, M., Santos, A., Andrade, K.S., Sole, M., Surtee, M., de Schotten M, Thiebaud, Vergallo, A., Younsi, N., Aguilar, Lisi Flores, Babiloni, Claudio, Baldacci, Filippo, Benda, Norbert, Black, Keith L., Bokde, Arun L.W., Bonuccelli, Ubaldo, Broich, Karl, Cacciola, Francesco, Castrillo, Juan, Cavedo, Enrica, Ceravolo, Roberto, Chiesa, Patrizia A., Corvol, Jean-Christophe, Cuello, Augusto Claudio, Cummings, Jeffrey L., Depypere, Herman, Dubois, Bruno, Duggento, Andrea, Escott-Price, Valentina, Federoff, Howard, Ferretti, Maria Teresa, Fiandaca, Massimo, Frank, Richard A., Garaci, Francesco, Geerts, Hugo, Giorgi, Filippo S., Graziani, Manuela, Haberkamp, Marion, Habert, Marie-Odile, Hampel, Harald, Herholz, Karl, Karran, Eric, Kim, Seung H., Koronyo, Yosef, Koronyo-Hamaoui, Maya, Lamari, Foudil, Langevin, Todd, Lehéricy, Stéphane, Lista, Simone, Lorenceau, Jean, Mango, Dalila, Mapstone, Mark, Neri, Christian, Nisticò, Robert, O'Bryant, Sid E., Perry, George, Ritchie, Craig, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S., Sporns, Olaf, Toschi, Nicola, Verdooner, Steven R., Vergallo, Andrea, Villain, Nicolas, Welikovitch, Lindsay A., Woodcock, Janet, Younesi, Erfan, Mégret, Lucile, Zetterberg, Henrik, Blennow, Kaj, Vanmechelen, Eugeen, De Vos, Ann, and Potier, Marie-Claude
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- 2019
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43. Meningioma transformation to glioblastoma following stereotactic radiosurgery: A case report and review of the literature
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Boyke, Andre Everett, primary, Michel, Michelot, additional, Garcia, Catherine Michelle, additional, Bannykh, Serguei I., additional, Chan, Julie Lynn, additional, and Black, Keith L., additional
- Published
- 2023
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44. Sex differences in functional and molecular neuroimaging biomarkers of Alzheimer's disease in cognitively normal older adults with subjective memory complaints
- Author
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Bakardjian, Hovagim, Benali, Habib, Bertin, Hugo, Bonheur, Joel, Boukadida, Laurie, Boukerrou, Nadia, Cavedo, Enrica, Chiesa, Patrizia, Colliot, Olivier, Dubois, Bruno, Dubois, Marion, Epelbaum, Stéphane, Gagliardi, Geoffroy, Genthon, Remy, Habert, Marie-Odile, Hampel, Harald, Houot, Marion, Kas, Aurélie, Lamari, Foudil, Levy, Marcel, Lista, Simone, Metzinger, Christiane, Mochel, Fanny, Nyasse, Francis, Poisson, Catherine, Potier, Marie-Claude, Revillon, Marie, Santos, Antonio, Andrade, Katia Santos, Sole, Marine, Surtee, Mohmed, de Schotten, Michel Thiebaud, Vergallo, Andrea, Younsi, Nadjia, Aguilar, Lisi Flores, Babiloni, Claudio, Baldacci, Filippo, Benda, Norbert, Black, Keith L., Bokde, Arun L.W., Bonuccelli, Ubaldo, Broich, Karl, Bun, René S., Cacciola, Francesco, Castrillo, Juan, Ceravolo, Roberto, Chiesa, Patrizia A., Coman, Cristina-Maria, Corvol, Jean-Christophe, Cuello, Augusto Claudio, Cummings, Jeffrey L., Depypere, Herman, Duggento, Andrea, Durrleman, Stanley, Escott-Price, Valentina, Federoff, Howard, Ferretti, Maria Teresa, Fiandaca, Massimo, Frank, Richard A., Garaci, Francesco, George, Nathalie, Giorgi, Filippo S., Graziani, Manuela, Haberkamp, Marion, Herholz, Karl, Karran, Eric, Kim, Seung H., Koronyo, Yosef, Koronyo-Hamaoui, Maya, Langevin, Todd, Lehéricy, Stéphane, Lorenceau, Jean, Mapstone, Mark, Neri, Christian, Nisticò, Robert, Nyasse-Messene, Francis, O'bryant, Sid E., Perry, George, Ritchie, Craig, Rojkova, Katrine, Rossi, Simone, Saidi, Amira, Santarnecchi, Emiliano, Schneider, Lon S., Sporns, Olaf, Toschi, Nicola, Verdooner, Steven R., Villain, Nicolas, Welikovitch, Lindsay A., Woodcock, Janet, Younesi, Erfan, Grothe, Michel J., and Teipel, Stefan J.
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- 2018
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45. The Somatic Genomic Landscape of Glioblastoma
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Brennan, Cameron W, Verhaak, Roel GW, McKenna, Aaron, Campos, Benito, Noushmehr, Houtan, Salama, Sofie R, Zheng, Siyuan, Chakravarty, Debyani, Sanborn, J Zachary, Berman, Samuel H, Beroukhim, Rameen, Bernard, Brady, Wu, Chang-Jiun, Genovese, Giannicola, Shmulevich, Ilya, Barnholtz-Sloan, Jill, Zou, Lihua, Vegesna, Rahulsimham, Shukla, Sachet A, Ciriello, Giovanni, Yung, WK, Zhang, Wei, Sougnez, Carrie, Mikkelsen, Tom, Aldape, Kenneth, Bigner, Darell D, Van Meir, Erwin G, Prados, Michael, Sloan, Andrew, Black, Keith L, Eschbacher, Jennifer, Finocchiaro, Gaetano, Friedman, William, Andrews, David W, Guha, Abhijit, Iacocca, Mary, O’Neill, Brian P, Foltz, Greg, Myers, Jerome, Weisenberger, Daniel J, Penny, Robert, Kucherlapati, Raju, Perou, Charles M, Hayes, D Neil, Gibbs, Richard, Marra, Marco, Mills, Gordon B, Lander, Eric, Spellman, Paul, Wilson, Richard, Sander, Chris, Weinstein, John, Meyerson, Matthew, Gabriel, Stacey, Laird, Peter W, Haussler, David, Getz, Gad, Chin, Lynda, Network, TCGA Research, Benz, Christopher, Barrett, Wendi, Ostrom, Quinn, Wolinsky, Yingli, Bose, Bikash, Boulos, Paul T, Boulos, Madgy, Brown, Jenn, Czerinski, Christine, Eppley, Matthew, Kempista, Thelma, Kitko, Teresa, Koyfman, Yakov, Rabeno, Brenda, Rastogi, Pawan, Sugarman, Michael, Swanson, Patricia, Yalamanchii, Kennedy, Otey, Ilana P, Liu, Yingchun Spring, Xiao, Yonghong, Auman, J Todd, Chen, Peng-Chieh, Hadjipanayis, Angela, Lee, Eunjung, Lee, Semin, Park, Peter J, Seidman, Jonathan, Yang, Lixing, Kalkanis, Steven, Poisson, Laila M, Raghunathan, Aditya, Scarpace, Lisa, Bressler, Ryan, and Eakin, Andrea
- Subjects
Biological Sciences ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Genetics ,Brain Cancer ,Precision Medicine ,Orphan Drug ,Biotechnology ,Rare Diseases ,Brain Disorders ,Cancer ,Neurosciences ,Cancer Genomics ,Human Genome ,2.1 Biological and endogenous factors ,4.1 Discovery and preclinical testing of markers and technologies ,5.1 Pharmaceuticals ,4.2 Evaluation of markers and technologies ,Brain Neoplasms ,Female ,Gene Expression Profiling ,Gene Regulatory Networks ,Glioblastoma ,Humans ,Male ,Mutation ,Proteome ,Signal Transduction ,TCGA Research Network ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences - Abstract
We describe the landscape of somatic genomic alterations based on multidimensional and comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify several novel mutated genes as well as complex rearrangements of signature receptors, including EGFR and PDGFRA. TERT promoter mutations are shown to correlate with elevated mRNA expression, supporting a role in telomerase reactivation. Correlative analyses confirm that the survival advantage of the proneural subtype is conferred by the G-CIMP phenotype, and MGMT DNA methylation may be a predictive biomarker for treatment response only in classical subtype GBM. Integrative analysis of genomic and proteomic profiles challenges the notion of therapeutic inhibition of a pathway as an alternative to inhibition of the target itself. These data will facilitate the discovery of therapeutic and diagnostic target candidates, the validation of research and clinical observations and the generation of unanticipated hypotheses that can advance our molecular understanding of this lethal cancer.
- Published
- 2013
46. Retinal capillary degeneration and blood-retinal barrier disruption in murine models of Alzheimer’s disease
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Shi, Haoshen, Koronyo, Yosef, Fuchs, Dieu-Trang, Sheyn, Julia, Wawrowsky, Kolja, Lahiri, Shouri, Black, Keith L., and Koronyo-Hamaoui, Maya
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- 2020
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47. The effects of enhancing angiotensin converting enzyme in myelomonocytes on ameliorating Alzheimer’s-related disease and preserving cognition
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Danziger, Ron, primary, Fuchs, Dieu-Trang, additional, Koronyo, Yosef, additional, Rentsendorj, Altan, additional, Sheyn, Julia, additional, Hayden, Eric Y., additional, Teplow, David B., additional, Black, Keith L., additional, Fuchs, Sebastien, additional, Bernstein, Kenneth E., additional, and Koronyo-Hamaoui, Maya, additional
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- 2023
- Full Text
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48. Osteopontin depletion in macrophages perturbs proteostasis via regulating UCHL1-UPS axis and mitochondria-mediated apoptosis
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Rentsendorj, Altan, primary, Raedschelders, Koen, additional, Fuchs, Dieu-Trang, additional, Sheyn, Julia, additional, Vaibhav, Vineet, additional, Porritt, Rebecca A., additional, Shi, Haoshen, additional, Dagvadorj, Jargalsaikhan, additional, de Freitas Germano, Juliana, additional, Koronyo, Yosef, additional, Arditi, Moshe, additional, Black, Keith L., additional, Gaire, Bhakta Prasad, additional, Van Eyk, Jennifer E., additional, and Koronyo-Hamaoui, Maya, additional
- Published
- 2023
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49. Retinal arterial Aβ 40 deposition is linked with tight junction loss and cerebral amyloid angiopathy in MCI and AD patients
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Shi, Haoshen, primary, Koronyo, Yosef, additional, Fuchs, Dieu‐Trang, additional, Sheyn, Julia, additional, Jallow, Ousman, additional, Mandalia, Krishna, additional, Graham, Stuart L., additional, Gupta, Vivek K., additional, Mirzaei, Mehdi, additional, Kramerov, Andrei A., additional, Ljubimov, Alexander V., additional, Hawes, Debra, additional, Miller, Carol A., additional, Black, Keith L., additional, Carare, Roxana O., additional, and Koronyo‐Hamaoui, Maya, additional
- Published
- 2023
- Full Text
- View/download PDF
50. Glioma immunotherapy enhancement and CD8-specific sialic acid cleavage by isocitrate dehydrogenase (IDH)-1
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Cordner, Ryan, primary, Jhun, Michelle, additional, Panwar, Akanksha, additional, Wang, HongQiang, additional, Gull, Nicole, additional, Murali, Ramachandran, additional, McAbee, Joseph H., additional, Mardiros, Armen, additional, Sanchez-Takei, Akane, additional, Mazer, Mia W., additional, Fan, Xuemo, additional, Jouanneau, Emmanuel, additional, Yu, John S., additional, Black, Keith L., additional, and Wheeler, Christopher J., additional
- Published
- 2023
- Full Text
- View/download PDF
Catalog
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