408 results on '"Bishop GA"'
Search Results
2. Dipeptidyl peptidase IV is down-regulated in rat hepatoma cells at the mRNA level
- Author
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Catherine A. Abbott, Bishop Ga, Wickson J, Geoff McCaughan, Siah Cl, and Ballesteros M
- Subjects
medicine.medical_specialty ,animal structures ,Dipeptidyl Peptidase 4 ,Lymphocyte ,Cell ,Down-Regulation ,Biology ,Aminopeptidase ,Dipeptidyl peptidase ,Leucyl Aminopeptidase ,Liver Neoplasms, Experimental ,Internal medicine ,Tumor Cells, Cultured ,medicine ,Animals ,RNA, Messenger ,Dipeptidyl-Peptidases and Tripeptidyl-Peptidases ,chemistry.chemical_classification ,Hepatology ,Gastroenterology ,In vitro ,Rats ,medicine.anatomical_structure ,Endocrinology ,Enzyme ,Liver ,chemistry ,Cell culture ,Immunostaining - Abstract
Dipeptidyl peptidase IV (DPP-IV) is a cell surface ectopeptidase that has been implicated in cell-extracellular matrix interactions, lymphocyte growth and the regulation of biological peptides. Previous studies have shown that immunostaining for DPP-IV and DPP-IV enzyme levels is decreased in hepatoma cells and levels have been correlated with the ability of such cells to adhere in vitro. The aim of this paper was to measure DPP-IV enzyme levels in rat hepatoma cells and to examine whether changes were associated with alterations at the mRNA level. The results indicate a greater than 90% reduction in DPP-IV enzyme levels in two rat hepatoma cell lines, HTC and H35, compared with rat hepatocytes. Enzyme levels of the control enzyme leucine aminopeptidase (LAP) were not decreased. mRNA studies indicated that these changes were associated with similar reductions in rat DPP-IV mRNA. It is concluded that DPP-IV is markedly reduced at the protein, enzyme and mRNA levels in rat hepatoma cells. The significance of these changes is unclear but may lead to decreased extracellular matrix interactions by such cells.
- Published
- 1993
3. Interleukin-12 (IL-12p70) promotes induction of highly potent Th1-like CD4+CD25+ T regulatory cells that inhibit allograft rejection in unmodified recipients
- Author
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Verma, ND, Hall, BM, Plain, KM, Robinson, CM, Boyd, R, Tran, GT, Wang, C, Bishop, GA, Hodgkinson, SJ, Verma, ND, Hall, BM, Plain, KM, Robinson, CM, Boyd, R, Tran, GT, Wang, C, Bishop, GA, and Hodgkinson, SJ
- Abstract
In rat models, CD4+CD25+ T regulatory cells (Treg) play a key role in the induction and maintenance of antigen-specific transplant tolerance, especially in DA rats with PVG cardiac allografts (1, 2). We have previously described generation of alloantigen-specific Treg (Ts1), by culture of naïve natural CD4+CD25+ Treg (nTreg) with specific alloantigen and IL-2 for 4 days. These cells express mRNA for IFN-γ receptor (ifngr) and suppress donor but not third party cardiac allograft rejection mediated by alloreactive CD4+ T cells at ratios of <1:10. Here, we show that Ts1 also expressed the IL-12p70 specific receptor (il-12rβ2) and that rIL-12p70 can induce their proliferation. Ts1 cells re-cultured with rIL-12p70 alone or rIL-12p70 and recombinant interleukin-2 (rIL-2), suppressed proliferation of CD4+ T cells in mixed lymphocyte culture at <1:1024, whereas Ts1 cells re-cultured with rIL-2 and alloantigen only suppressed at 1:32-64. The rIL-12p70 alloactivated Ts1 cells markedly delayed PVG, but not third party Lewis, cardiac allograft rejection in normal DA recipients. Ts1 cells re-cultured for 4 days with rIL-12p70 alone, but not those re-cultured with rIL-12p70 and rIL-2, expressed more il-12rβ2, t-bet, and ifn-γ, and continued to express the markers of Ts1 cells, foxp3, ifngr, and il-5 indicating Th1-like Treg were induced. Ts1 cells re-cultured with rIL-2 and alloantigen remained of the Ts1 phenotype and did not suppress cardiac graft rejection in normal DA rats. We induced highly suppressive Th1-like Treg from naïve nTreg in 7 days by culture with alloantigen, first with rIL-2 then with rIL-12p70. These Th1-like Treg delayed specific donor allograft rejection demonstrating therapeutic potential. © 2014 Verma, Hall, Plain, Robinson, Boyd, Tran, Wang, Bishop and Hodgkinson.
- Published
- 2014
4. Differential Migration of Passenger Leukocytes and Rapid Deletion of Naive Alloreactive CD8 T Cells After Mouse Liver Transplantation
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Tay, SS, Lu, B, Sierro, F, Benseler, V, McGuffog, CM, Bishop, GA, Cowan, PJ, McCaughan, GW, Dwyer, KM, Bowen, DG, Bertolino, P, Tay, SS, Lu, B, Sierro, F, Benseler, V, McGuffog, CM, Bishop, GA, Cowan, PJ, McCaughan, GW, Dwyer, KM, Bowen, DG, and Bertolino, P
- Abstract
Donor passenger leukocytes (PLs) from transplanted livers migrate to recipient lymphoid tissues, where they are thought to induce the deletion of donor-specific T cells and tolerance. Difficulties in tracking alloreactive T cells and PLs in rats and in performing this complex surgery in mice have limited progress in identifying the contribution of PL subsets and sites and the kinetics of T cell deletion. Here we developed a mouse liver transplant model in which PLs, recipient cells, and a reporter population of transgenic CD8 T cells specific for the graft could be easily distinguished and quantified in allografts and recipient organs by flow cytometry. All PL subsets circulated rapidly via the blood as soon as 1.5 hours after transplantation. By 24 hours, PLs were distributed differently in the lymph nodes and spleen, whereas donor natural killer and natural killer T cells remained in the liver and blood. Reporter T cells were activated in both liver and lymphoid tissues, but their numbers dramatically decreased within the first 48 hours. These results provide the first unequivocal demonstration of the differential recirculation of liver PL subsets after transplantation, and show that alloreactive CD8 T cells are deleted more rapidly than initially reported. This model will be useful for dissecting early events leading to the spontaneous acceptance of liver transplants.
- Published
- 2013
5. Differential actions of urocortins on neurons of the myenteric division of the enteric nervous system in guinea pig distal colon
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Liu, S, primary, Ren, W, additional, Qu, M-H, additional, Bishop, GA, additional, Wang, G-D, additional, Wang, X-Y, additional, Xia, Y, additional, and Wood, JD, additional
- Published
- 2009
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6. The role of the TRAF2/3 binding site in LMP1 and CD40 signaling
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Graham, JP, primary and Bishop, GA, additional
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- 2009
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7. Chimerism and clonal exhaustion [2] (multiple letters)
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Starzl, T, Bishop, GA, Sun, J, Shell, AGR, McCaughan, GW, Starzl, T, Bishop, GA, Sun, J, Shell, AGR, and McCaughan, GW
- Published
- 1998
8. Quantitative reverse transcriptase-PCR amplification of cytokine mRNA in liver biopsy specimens using a non-competitive method
- Author
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Bishop, GA, primary, Rokahr, KL, additional, Lowes, M, additional, McGuinness, PH, additional, Napoli, J, additional, Decruz, DJ, additional, Wong, W-Y, additional, and McCaughan, GW, additional
- Published
- 1997
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9. Differential actions of urocortins on neurons of the myenteric division of the enteric nervous system in guinea pig distal colon.
- Author
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Liu, S, Ren, W, Qu, M-H, Bishop, GA, Wang, G-D, Wang, X-Y, Xia, Y, Wood, JD, Liu, Sumei, Bishop, G A, and Wood, J D
- Subjects
NEURONS ,MYENTERIC plexus ,CELL division ,ENTERIC nervous system ,CORTICOTROPIN releasing hormone ,NEUROPEPTIDES ,GUINEA pigs as laboratory animals ,AMINES ,ANIMAL experimentation ,AUTONOMIC nervous system ,CELL receptors ,COLON (Anatomy) ,COMPARATIVE studies ,ELECTRODES ,GUINEA pigs ,HETEROCYCLIC compounds ,RESEARCH methodology ,MEDICAL cooperation ,PEPTIDES ,RESEARCH ,EVALUATION research - Abstract
Background and Purpose: Urocortins (Ucns) 1, 2 and 3 are corticotropin-releasing factor (CRF)-related neuropeptides and may be involved in neural regulation of colonic motor functions. Nevertheless, details of the neural mechanism of action for Ucns have been unclear. We have, here, tested the hypothesis that Ucns act in the enteric nervous system (ENS) to influence colonic motor behaviour.Experimental Approach: We used intracellular recording with 'sharp' microelectrodes, followed by intraneuronal injection of biocytin, and immunohistochemical localization of CRF(1) and CRF(2) receptors in guinea pig colonic tissue.Key Results: Application of Ucn1 depolarized membrane potentials and elevated excitability in 58% of AH-type and 60% of S-type colonic myenteric neurons. In most of the neurons tested, depolarizing responses evoked by Ucn-1 were suppressed by the CRF(1) receptor antagonist NBI 27914, but were unaffected by the CRF(2) receptor antagonist antisauvagine-30. The selective CRF(2) receptor agonists, Ucn2 and Ucn3, evoked depolarizing responses in 12 and 8% of the AH-type myenteric neurons, respectively, and had no effect on S-type neurons. Antisauvagine-30, but not NBI 27914, suppressed these Ucn2- and Ucn3-evoked responses. Immunohistochemical staining identified CRF(1) as the predominant CRF receptor subtype expressed by ganglion cell somas, while CRF(2)-immunoreactive neuronal somas were sparse. Ucns did not affect excitatory synaptic transmission in the ENS.Conclusions and Implications: The results suggest that Ucns act as neuromodulators to influence myenteric neuronal excitability. The excitatory action of Ucn1 in myenteric neurons was primarily at CRF(1) receptors, and the excitatory action of Ucn2 and Ucn3 was at CRF(2) receptors. [ABSTRACT FROM AUTHOR]- Published
- 2010
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10. Real-time reverse transcriptase–polymerase chain reaction (RT–PCR) for measurement of cytokine and growth factor mRNA expression with fluorogenic probes or SYBR Green I.
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Bishop, Ga, Yin, Jian Lin, Shackel, Nicholas A, Zekry, Amany, McGuinness, Peter H, Richards, Craig, Putten, Karien Van Der, McCaughan, Geoffrey W, Eris, Josette M, and Bishop, G Alex
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POLYMERASE chain reaction , *REVERSE transcriptase , *GROWTH factors , *CYTOKINES , *FLUORESCENT probes - Abstract
Summary Real-time quantitative reverse transcriptase–polymerase chain reaction (RT–PCR) is the method of choice for rapid and reproducible measurements of cytokine or growth factor expression in small samples. Fluorescence detection methods for monitoring real-time PCR include fluorogenic probes labelled with reporter and quencher dyes, such as Taqman probes or Molecular Beacons and the dsDNA-binding dye SYBR Green I. Fluorogenic (Taqman) probes for a range of human and rat cytokines and growth factors were tested for sensitivity and compared with an assay for SYBR Green I quantification using real-time fluorescence monitoring (PE Applied Biosystems Model 7700 sequence detector). SYBR Green I detection involved analysis of the melting temperature of the PCR product and measurement of fluorescence at the optimum temperature. Fluorogenic probes provided sensitive and reproducible detection of targets that ranged from low (<10 copies/reaction) to high (>107 copies/ reaction) expression. SYBR Green I gave reproducible quantification when the target gene was expressed at moderate to high levels (≥1000 copies/reaction), but did not give consistently reproducible quantification when the target gene was expressed at low levels. Although optimization of melting temperature improved the specificity of SYBR Green I detection, in our hands it did not equal the reproducible sensitivity and specificity of fluorogenic probes. The latter method is the first choice for measurement of low-level gene expression, although SYBR Green I is a simple and reproducible means to quantify genes that are expressed at moderate to high levels. [ABSTRACT FROM AUTHOR]
- Published
- 2001
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11. Physiological and anatomical studies of the interactions between Purkinje cells and basket cells in the cat's cerebellar cortex: evidence for a unitary relationship
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O'Donoghue, DL, primary, King, JS, additional, and Bishop, GA, additional
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- 1989
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12. TRAF3 regulates STAT6 activation and T-helper cell differentiation by modulating the phosphatase PTP1B.
- Author
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Arkee T, Hornick EL, and Bishop GA
- Subjects
- Animals, Mice, Signal Transduction, Th2 Cells metabolism, Th2 Cells cytology, Th2 Cells immunology, Proto-Oncogene Proteins c-akt metabolism, Proto-Oncogene Proteins c-akt genetics, Th1 Cells metabolism, Th1 Cells immunology, Th1 Cells cytology, Mice, Knockout, Receptors, Antigen, T-Cell metabolism, Humans, Cell Differentiation, TNF Receptor-Associated Factor 3 metabolism, TNF Receptor-Associated Factor 3 genetics, STAT6 Transcription Factor metabolism, STAT6 Transcription Factor genetics, Protein Tyrosine Phosphatase, Non-Receptor Type 1 metabolism, Protein Tyrosine Phosphatase, Non-Receptor Type 1 genetics
- Abstract
The adaptor protein tumor necrosis factor receptor-associated factor 3 (TRAF3) is a multifaceted regulator of lymphocyte biology that plays key roles in modulation of the molecular signals required for T-cell activation and function. TRAF3 regulates signals mediated by the T-cell receptor (TCR), costimulatory molecules, and cytokine receptors, which each drive activation of the serine/threonine kinase Akt. The impact of TRAF3 upon TCR-CD28-mediated activation of Akt, and thus on the diverse cellular processes regulated by Akt, including CD4 T-cell fate decisions, remains poorly understood. We show here that TRAF3 deficiency led to impaired Akt activation and thus to impaired in vitro skewing of CD4 T cells into the T
H 1 and TH 2 fates. We investigated the role of TRAF3 in regulation of signaling pathways that drive TH 1 and TH 2 differentiation and found that TRAF3 enhanced activation of signal transducer and activator of transcription 6 (STAT6), thus promoting skewing toward the TH 2 fate. TRAF3 promoted STAT6 activation by regulating recruitment of the inhibitory molecule protein tyrosine phosphatase 1B to the IL-4R signaling complex, in a manner that required integration of TCR-CD28- and IL-4R-mediated signals. This work reveals a new mechanism for TRAF3-mediated regulation of STAT6 activation in CD4 T cells and adds to our understanding of the diverse roles played by TRAF3 as an important regulator of T-cell biology., Competing Interests: Conflict of interest The authors declare that they have no conflicts of interest with the contents of this article., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2024
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13. TRAF3 regulation of proximal TLR signaling in B cells.
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Ybarra TK and Bishop GA
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- Animals, Mice, Syk Kinase metabolism, Myeloid Differentiation Factor 88 metabolism, Myeloid Differentiation Factor 88 genetics, Mice, Knockout, Mice, Inbred C57BL, NF-kappa B metabolism, TNF Receptor-Associated Factor 3 metabolism, TNF Receptor-Associated Factor 3 genetics, B-Lymphocytes immunology, B-Lymphocytes metabolism, Signal Transduction, Toll-Like Receptors metabolism, TNF Receptor-Associated Factor 6 metabolism
- Abstract
Toll-like receptors are pattern recognition receptors that bridge the innate and adaptive immune responses and are critical for host defense. Most studies of Toll-like receptors have focused upon their roles in myeloid cells. B lymphocytes express most Toll-like receptors and are responsive to Toll-like receptor ligands, yet Toll-like receptor-mediated signaling in B cells is relatively understudied. This is an important knowledge gap, as Toll-like receptor functions can be cell type specific. In striking contrast to myeloid cells, TRAF3 inhibits TLR-mediated functions in B cells. TRAF3-deficient B cells display enhanced IRF3 and NFκB activation, cytokine production, immunoglobulin isotype switching, and antibody production in response to Toll-like receptors 3, 4, 7, and 9. Here, we address the question of how TRAF3 impacts initial B-cell Toll-like receptor signals to regulate downstream activation. We found that TRAF3 in B cells associated with proximal Toll-like receptor 4 and 7 signaling proteins, including MyD88, TRAF6, and the tyrosine kinase Syk. In the absence of TRAF3, TRAF6 showed a greater association with several Toll-like receptor signaling proteins, suggesting that TRAF3 may inhibit TRAF6 access to Toll-like receptor signaling complexes and thus early Toll-like receptor signaling. In addition, our results highlight a key role for Syk in Toll-like receptor signaling in B cells. In the absence of TRAF3, Syk activation was enhanced in response to ligands for Toll-like receptors 4 and 7, and Syk inhibition reduced downstream Toll-like receptor-mediated NFκB activation and proinflammatory cytokine production. This study reveals multiple mechanisms by which TRAF3 serves as a key negative regulator of early Toll-like receptor signaling events in B cells., Competing Interests: Conflict of interest statement. None declared., (© The Author(s) 2024. Published by Oxford University Press on behalf of Society for Leukocyte Biology. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
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- 2024
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14. Analyzing the relative importance of habitat quantity and quality for boosting pollinator populations in agricultural landscapes.
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Fijen TPM, Bishop GA, Ganuza C, Scheper J, and Kleijn D
- Abstract
To increase pollinator populations, international policy targets minimum levels of seminatural habitat cover, but it is unknown whether improving the quality of existing habitats could bring similar benefits without the need of reducing cropland area. Using data we collected in 26 Italian agricultural landscapes during the entire flying season, we explored the relative importance of habitat quantity (seminatural habitat cover) and quality (flower availability) on pollinator densities in seminatural habitats. We obtained transect-based counts and estimated the effect of habitat quantity (proportion of seminatural habitat) and quality (flower cover and richness) on wild bee and hoverfly densities. We used the relationships revealed in the data to simulate pollinator population sizes in landscapes with varying habitat quantity and quality. Wild bee densities were only related to flower availability, whereas hoverfly densities were additionally related to seminatural habitat cover. We found that in complex agricultural landscapes (above 15% seminatural habitat cover), improving habitat quality increased pollinator populations more effectively than increasing habitat quantity. However, increasing habitat quantity was by far the most effective approach for boosting pollinator populations in simple landscapes., (© 2024 The Author(s). Conservation Biology published by Wiley Periodicals LLC on behalf of Society for Conservation Biology.)
- Published
- 2024
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15. Characterizing Foxp3 + and Foxp3 - T cells in the homeostatic state and after allo-activation: resting CD4 + Foxp3 + Tregs have molecular characteristics of activated T cells.
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Liu Z, Baines KJ, Niessen NM, Heer MK, Clark D, Bishop GA, and Trevillian PR
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- Animals, Mice, CTLA-4 Antigen genetics, CTLA-4 Antigen metabolism, Flow Cytometry, Ki-67 Antigen metabolism, Forkhead Transcription Factors metabolism, Programmed Cell Death 1 Receptor metabolism, T-Lymphocytes, Regulatory
- Abstract
Due to the intracellular expression of Foxp3 it is impossible to purify viable Foxp3
+ cells on the basis of Foxp3 staining. Consequently CD4+ Foxp3+ regulatory T cells (Tregs) in mice have mostly been characterized using CD4+ CD25+ T cells or GFP-Foxp3 reporter T cells. However, these two populations cannot faithfully represent Tregs as the expression of CD25 and Foxp3 does not completely overlap and GFP+ Foxp3+ reporter T cells have been reported to be functionally altered. The aim of this study was to characterize normal Tregs without separating Foxp3+ and Foxp3- cells for the expression of the main functional molecules and proliferation behaviors by flow cytometry and to examine their gene expression characteristics through differential gene expression. Our data showed that the expressions of Foxp3, CD25, CTLA-4 (both intracellular and cell surface) and PD-1 was mostly confined to CD4+ T cells and the expression of Foxp3 did not completely overlap with the expression of CD25, CTLA-4 or PD-1. Despite higher levels of expression of the T cell inhibitory molecules CTLA-4 and PD-1, Tregs maintained higher levels of Ki-67 expression in the homeostatic state and had greater proliferation in vivo after allo-activation than Tconv. Differential gene expression analysis revealed that resting Tregs exhibited immune activation markers characteristic of activated Tconv. This is consistent with the flow data that the T cell activation markers CD25, CTLA-4, PD-1, and Ki-67 were much more strongly expressed by Tregs than Tconv in the homeostatic state., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision., (Copyright © 2024 Liu, Baines, Niessen, Heer, Clark, Bishop and Trevillian.)- Published
- 2024
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16. The JI-Changing with the Times.
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Bishop GA
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- 2024
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17. Sepsis leads to lasting changes in phenotype and function of naïve CD8 T cells.
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Berton RR, McGonagil PW, Jensen IJ, Ybarra TK, Bishop GA, Harty JT, Griffith TS, and Badovinac VP
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- Humans, Mice, Animals, CD8-Positive T-Lymphocytes, Immunity, Innate, Phenotype, Mice, Inbred C57BL, Immunologic Memory, Cytokine Release Syndrome, Sepsis
- Abstract
Sepsis, an amplified immune response to systemic infection, is characterized by a transient cytokine storm followed by chronic immune dysfunction. Consequently, sepsis survivors are highly susceptible to newly introduced infections, suggesting sepsis can influence the function and composition of the naïve CD8 T cell pool and resulting pathogen-induced primary CD8 T cell responses. Here, we explored the extent to which sepsis induces phenotypic and functional changes within the naïve CD8 T cell pool. To interrogate this, the cecal ligation and puncture (CLP) mouse model of polymicrobial sepsis was used. In normal, non-septic mice, we show type-I interferon (IFN I)-mediated signaling plays an important role in driving the phenotypic and functional heterogeneity in the naïve CD8 T cell compartment leading to increased representation of Ly6C+ naïve CD8 T cells. In response to viral infection after sepsis resolution, naïve Ly6C+ CD8 T cells generated more primary effector and memory CD8 T cells with slower conversion to a central memory CD8 T cell phenotype (Tcm) than Ly6C- naïve CD8 T cells. Importantly, as a potent inducer of cytokine storm and IFN I production, sepsis leads to increased representation of Ly6C+ naïve CD8 T cells that maintained their heightened ability to respond (i.e., effector and memory CD8 T cell accumulation and cytokine production) to primary LCMV infection. Lastly, longitudinal analyses of peripheral blood samples obtained from septic patients revealed profound changes in CD8 T cell subset composition and frequency compared to healthy controls. Thus, sepsis has the capacity to alter the composition of naïve CD8 T cells, directly influencing primary CD8 T cell responses to newly introduced infections., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Berton et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2023
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18. CD40 Signaling in Mice Elicits a Broad Antiviral Response Early during Acute Infection with RNA Viruses.
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Rogers KJ, Richards PT, Zacharias ZR, Stunz LL, Vijay R, Butler NS, Legge KL, Bishop GA, and Maury W
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- Animals, Mice, Interferon-gamma, Macrophages, CD40 Antigens metabolism, RNA Viruses, RNA Virus Infections immunology
- Abstract
Macrophages are critical in the pathogenesis of a diverse group of viral pathogens, both as targets of infection and for eliciting primary defense mechanisms. Our prior in vitro work identified that CD40 signaling in murine peritoneal macrophages protects against several RNA viruses by eliciting IL-12, which stimulates the production of interferon gamma (IFN-γ). Here, we examine the role of CD40 signaling in vivo. We show that CD40 signaling is a critical, but currently poorly appreciated, component of the innate immune response using two distinct infectious agents: mouse-adapted influenza A virus (IAV, PR8) and recombinant VSV encoding the Ebola virus glycoprotein (rVSV-EBOV GP). We find that stimulation of CD40 signaling decreases early IAV titers, whereas loss of CD40 elevated early titers and compromised lung function by day 3 of infection. Protection conferred by CD40 signaling against IAV is dependent on IFN-γ production, consistent with our in vitro studies. Using rVSV-EBOV GP that serves as a low-biocontainment model of filovirus infection, we demonstrate that macrophages are a CD40-expressing population critical for protection within the peritoneum and T-cells are the key source of CD40L (CD154). These experiments reveal the in vivo mechanisms by which CD40 signaling in macrophages regulates the early host responses to RNA virus infection and highlight how CD40 agonists currently under investigation for clinical use may function as a novel class of broad antiviral treatments.
- Published
- 2023
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19. TRAF3: Guardian of T lymphocyte functions.
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Hornick EL and Bishop GA
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- Animals, Mice, Receptors, Antigen, T-Cell metabolism, Receptors, Cytokine metabolism, Signal Transduction, T-Lymphocytes, Regulatory, TNF Receptor-Associated Factor 3 metabolism
- Abstract
Tumor necrosis factor receptor (TNFR)-associated factor 3 (TRAF3) is an adapter protein with many context-specific functions. Early studies of lymphocyte TRAF3 hinted at TRAF3's importance for T cell function, but elucidation of specific mechanisms was delayed by early lethality of globally TRAF3
-/- mice. Development of a conditional TRAF3-deficient mouse enabled important descriptive and mechanistic insights into how TRAF3 promotes optimal T cell function. Signaling through the T cell antigen receptor (TCR) fails to induce normal proliferation and survival in TRAF3-/- T cells, and TCR-activated cells in vitro and in vivo have deficient cytokine production. These defects can be traced to incorrect localization and function of negative regulatory phosphatases acting at different parts of the signaling cascade, as can dysregulated effector responses and memory T cell homeostasis in vivo and an enlarged regulatory T cell (Treg) compartment. The important regulatory activity of TRAF3 is also evident at members of the TNFR superfamily and cytokine receptors. Here, we review significant advances in mechanistic understanding of how TRAF3 regulates T cell differentiation and function, through modulation of signaling through the TCR, costimulatory receptors, and cytokine receptors. Finally, we briefly discuss the recent identification of families carrying single allele loss-of-function mutations in TRAF3 , and compare the findings in their T cells with the T cell defects identified in mice whose T cells completely lack T cell TRAF3. Together, the body of work describing TRAF3-mediated regulation of T cell effector function and differentiation frame TRAF3 as an important modulator of T cell signal integration., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Hornick and Bishop.)- Published
- 2023
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20. The Tumor Suppressor Protein TRAF3 Modulates GSK3 Activity and Susceptibility of B Lymphoma Cells to GSK3 Inhibition.
- Author
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Hornick EL, Stunz LL, Sabree S, Wu X, Witzig TE, and Bishop GA
- Abstract
TNF receptor-associated factor 3 (TRAF3) is an adapter protein that inhibits many signals that promote B cell survival and activation. Mice with a B cell-specific TRAF3 deficiency and humans with a rare haploinsufficiency in TRAF3 have enhanced development of BCLs as they age. Loss-of-function mutations in TRAF3 are common in B cell malignancies. Recent studies show that pharmacological inhibition of the enzyme glycogen synthase kinase 3 (GSK3), which regulates cellular growth, survival, and metabolism, inhibits growth and survival of BCL-derived B cells. In this study, we found that TRAF3 and GSK3 associated in B cells. The relative levels of TRAF3 in BCL cell lines correlated positively with the ratio of inactive to total GSK3β, and negatively correlated with susceptibility to GSK3 inhibition by the GSK3 inhibitory drug 9-ING-41, currently in clinical trials. Uniquely in BCLs with low TRAF3, GSK3 inhibition caused increased loss of the TRAF3-regulated, anti-apoptotic protein Mcl-1. GSK3 inhibition also blocked hyperresponsiveness to IL-6 receptor signaling in TRAF3-deficient BCL cells. Together, these results support the utility of 9-ING-41 as a treatment for BCL, and suggest that a decrease or loss of TRAF3 in BCLs could act as a biomarker for increased susceptibility to GSK3 inhibitor treatment.
- Published
- 2022
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21. TRAF3 enhances type I interferon receptor signaling in T cells by modulating the phosphatase PTPN22.
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Hornick EL, Wallis AM, and Bishop GA
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- Antiviral Agents metabolism, Phosphoric Monoester Hydrolases metabolism, Receptor, Interferon alpha-beta genetics, Receptors, Tumor Necrosis Factor metabolism, T-Lymphocytes metabolism, Interferon Type I genetics, Interferon Type I metabolism, TNF Receptor-Associated Factor 3 genetics, TNF Receptor-Associated Factor 3 metabolism
- Abstract
Type I interferons (IFNs) are among the most powerful tools that host cells deploy against intracellular pathogens. Their effectiveness is due both to the rapid, directly antiviral effects of IFN-stimulated gene products and to the effects of type I IFN on responding immune cells. Type I IFN signaling through its receptor, IFNAR, is tightly regulated at multiple steps in the signaling cascade, including at the level of IFNAR downstream effectors, which include the kinase JAK1 and the transcriptional regulator STAT1. Here, we found that tumor necrosis factor receptor (TNFR)-associated factor 3 (TRAF3) enhanced the activation of JAK1 and STAT1 specifically in CD4
+ T cells by preventing recruitment of the negative regulatory phosphatase PTPN22 to the IFNAR complex. The balance between signals through IFNAR and other cytokine receptors influences CD4+ T cell differentiation and function during infections. Our work reveals TRAF3 and PTPN22 as key regulators of CD4+ T cell activation by type I IFNs.- Published
- 2022
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22. Immunodeficiency, autoimmunity, and increased risk of B cell malignancy in humans with TRAF3 mutations.
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Rae W, Sowerby JM, Verhoeven D, Youssef M, Kotagiri P, Savinykh N, Coomber EL, Boneparth A, Chan A, Gong C, Jansen MH, du Long R, Santilli G, Simeoni I, Stephens J, Wu K, Zinicola M, Allen HL, Baxendale H, Kumararatne D, Gkrania-Klotsas E, Scheffler Mendoza SC, Yamazaki-Nakashimada MA, Ruiz LB, Rojas-Maruri CM, Lugo Reyes SO, Lyons PA, Williams AP, Hodson DJ, Bishop GA, Thrasher AJ, Thomas DC, Murphy MP, Vyse TJ, Milner JD, Kuijpers TW, and Smith KGC
- Subjects
- Autoimmunity genetics, B-Lymphocytes, Humans, Mutation, Neoplasms pathology, TNF Receptor-Associated Factor 3 genetics, TNF Receptor-Associated Factor 3 metabolism
- Abstract
Tumor necrosis factor receptor-associated factor 3 (TRAF3) is a central regulator of immunity. TRAF3 is often somatically mutated in B cell malignancies, but its role in human immunity is not defined. Here, in five unrelated families, we describe an immune dysregulation syndrome of recurrent bacterial infections, autoimmunity, systemic inflammation, B cell lymphoproliferation, and hypergammaglobulinemia. Affected individuals each had monoallelic mutations in TRAF3 that reduced TRAF3 expression. Immunophenotyping showed that patients' B cells were dysregulated, exhibiting increased nuclear factor-κB 2 activation, elevated mitochondrial respiration, and heightened inflammatory responses. Patients had mild CD4
+ T cell lymphopenia, with a reduced proportion of naïve T cells but increased regulatory T cells and circulating T follicular helper cells. Guided by this clinical phenotype, targeted analyses demonstrated that common genetic variants, which also reduce TRAF3 expression, are associated with an increased risk of B cell malignancies, systemic lupus erythematosus, higher immunoglobulin levels, and bacterial infections in the wider population. Reduced TRAF3 conveys disease risks by driving B cell hyperactivity via intrinsic activation of multiple intracellular proinflammatory pathways and increased mitochondrial respiration, with a likely contribution from dysregulated T cell help. Thus, we define monogenic TRAF3 haploinsufficiency syndrome and demonstrate how common TRAF3 variants affect a range of human diseases.- Published
- 2022
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23. Utah Wintertime Measurements of Heavy-Duty Vehicle Nitrogen Oxide Emission Factors.
- Author
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Bishop GA, Haugen MJ, McDonald BC, and Boies AM
- Subjects
- Environmental Monitoring, Motor Vehicles, Nitric Oxide, Nitrogen Oxides analysis, Utah, Air Pollutants analysis, Vehicle Emissions analysis
- Abstract
There have only been a few wintertime studies of heavy-duty vehicle (HDV) NO
x emissions in the United States, and while they have observed increased emissions, fleet characterization to identify the cause has been lacking. We have collected wintertime measurements of NOx emission factors from 1591 HDVs at a Utah Port of Entry in December 2020 that includes individual vehicle identification. In general, NOx emission factors for 2011 and newer chassis model year HDV are significantly higher than those for 2017 spring measurements from California. The newest chassis model year HDV (2017-2021) NOx emission factors are similar, indicating no significant emission deterioration over the 5 year period, though they are still approximately a factor of 3 higher than the portable emission measurement on-road enforcement standard. We estimate that ambient temperature increases NOx emissions no more than 25% in the newer HDV, likely through reductions in catalyst efficiencies. NOx emissions increase to a significantly higher level for the 2011-2013 chassis model year vehicles, where within the uncertainties, they have emissions similar to older precontrol vehicles, indicating that they have lost their NOx control capabilities within 8 years. MOVES3 modeling of the Utah fleet underpredicted mean NOx emissions by a factor of 1.8 but the MOVES3 estimate is helped by including a larger fraction of high-emitting glider kit trucks (new chassis with pre-emission control engines) than found in the observations.- Published
- 2022
- Full Text
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24. On-Road NO x Emissions Evaluation of the Repair Effectiveness for Recalled Volkswagen Group Light-Duty Diesel Vehicles in the United States.
- Author
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Bishop GA
- Subjects
- Environmental Monitoring, Gasoline, Motor Vehicles, Seasons, United States, Vehicle Emissions analysis, Air Pollutants analysis
- Abstract
The admission by the Volkswagen Group in the fall of 2015 that they had duped the United States new vehicle emissions certification testing resulted in perhaps the most expensive violation of U.S. environmental vehicle emission regulations in its history. As part of the subsequent recall of more than 500 000 vehicles in the U.S., owners could sell their vehicles back to the companies or have them repaired. We have used a number of large on-road emission measurement data sets that were routinely collected before and after the recall to evaluate the fuel specific NO
x emissions benefit for the vehicles that were repaired and remained in service. We found that on-road fuel specific NOx emissions were reduced by 83% from the prerepair group. The reductions increased to 91% if we only compare with vehicles that were fully repaired. NO2 emissions were dramatically reduced by an even larger percentage >95%. We find that the repairs resulted in fuel specific NOx emissions that are comparable or slightly lower than in-use light and medium-duty diesel trucks measured in Denver in 2020 indicating the repairs were a success.- Published
- 2021
- Full Text
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25. Activated B lymphocytes and tumor cell lysate as an effective cellular cancer vaccine.
- Author
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Oxley KL, Hanson BM, Zani AN, and Bishop GA
- Subjects
- Animals, Antigen Presentation immunology, Cancer Vaccines pharmacology, Chemotaxis, Leukocyte immunology, Female, Lymphocyte Activation immunology, Male, Mice, Mice, Inbred C57BL, T-Lymphocytes immunology, Antigens, Neoplasm immunology, B-Lymphocytes immunology, Cancer Vaccines immunology, Melanoma, Experimental immunology, Skin Neoplasms immunology
- Abstract
Cancer vaccines that utilize patient antigen-presenting cells to fight their own tumors have shown exciting promise in many preclinical studies, but have proven quite challenging to translate to clinical feasibility. Dendritic cells have typically been the cell of choice for such vaccine platforms, due to their ability to endocytose antigens nonspecifically, and their expression of multiple surface molecules that enhance antigen presentation. However, dendritic cells are present in low numbers in human peripheral blood and must be matured in culture before use in vaccines. Mature B lymphocytes, in contrast, are relatively abundant in peripheral blood, and can be quickly activated and expanded in overnight cultures. We devised an optimal stimulation cocktail that engages the B cell antigen receptor, CD40, TLR4 and TLR7, to activate B cells to present antigens from lysates of the recipient's tumor cells, precluding the need for known tumor antigens. This B cell vaccine (Bvac) improved overall survival from B16F1 melanoma challenge, as well as reduced tumor size and increased time to tumor appearance. Bvac upregulated B cell antigen presentation molecules, stimulated activation of both CD4
+ and CD8+ T cells, and induced T cell migration. Bvac provides an alternative cellular vaccine strategy that has considerable practical advantages for translation to clinical settings., (© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2021
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26. Multiple mechanisms for TRAF3-mediated regulation of the T cell costimulatory receptor GITR.
- Author
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Li H, Hostager BS, Arkee T, and Bishop GA
- Subjects
- Animals, Female, Glucocorticoid-Induced TNFR-Related Protein physiology, Interleukin-2 metabolism, Lymphocyte Activation, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, NF-kappa B metabolism, Receptors, Tumor Necrosis Factor metabolism, Signal Transduction immunology, T-Lymphocytes metabolism, TNF Receptor-Associated Factor 3 physiology, Costimulatory and Inhibitory T-Cell Receptors metabolism, Glucocorticoid-Induced TNFR-Related Protein metabolism, TNF Receptor-Associated Factor 3 metabolism
- Abstract
Tumor necrosis factor receptor (TNFR)-associated factor 3 (TRAF3) plays context-specific roles in multiple receptor-mediated signaling pathways in different cell types. Mice lacking TRAF3 in T cells display defective T-cell-mediated immune responses to immunization and infection and demonstrate defective early signaling via the TCR complex. However, the role of TRAF3 in the function of GITR/TNFRSF18, an important costimulatory member of the TNFR superfamily, is unclear. Here we investigated the impact of T cell TRAF3 status on both GITR expression and activation of specific kinases in the GITR signaling pathway in T cells. Our results indicate that TRAF3 negatively regulates GITR functions in several ways. First, expression of GITR protein was elevated in TRAF3-deficient T cells, resulting from both transcriptional and posttranslational regulation that led to greater GITR transcript levels, as well as enhanced GITR protein stability. TRAF3 associated with T cell GITR in a manner dependent upon GITR ligation. TRAF3 also inhibited several events of the GITR mediated early signaling cascade, in a manner independent of recruitment of phosphatases, a mechanism by which TRAF3 inhibits signaling through several other cytokine receptors. These results add new information to our understanding of GITR signaling and function in T cells, which is relevant to the potential use of GITR to enhance immune therapies., Competing Interests: Conflict of interest G. A. B. is a senior research career scientist of the VAMC. All other authors declare that they have no conflicts of interest with the contents of this article., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
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27. The Chx10-Traf3 Knockout Mouse as a Viable Model to Study Neuronal Immune Regulation.
- Author
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Gurley JM, Gmyrek GB, Hargis EA, Bishop GA, Carr DJJ, and Elliott MH
- Subjects
- Animals, Disease Models, Animal, Electroretinography, Immunity drug effects, Lipopolysaccharides pharmacology, Macrophages cytology, Macrophages immunology, Macrophages metabolism, Mice, Mice, Knockout, Neurons immunology, Receptors, CCR2 genetics, Receptors, CCR2 metabolism, Retina physiology, TNF Receptor-Associated Factor 3 deficiency, TNF Receptor-Associated Factor 3 metabolism, Transcription Factors deficiency, Uveitis etiology, Uveitis immunology, Uveitis metabolism, Visual Acuity, Homeodomain Proteins genetics, Neurons metabolism, Retina metabolism, TNF Receptor-Associated Factor 3 genetics, Transcription Factors genetics
- Abstract
Uncontrolled inflammation is associated with neurodegenerative conditions in central nervous system tissues, including the retina and brain. We previously found that the neural retina (NR) plays an important role in retinal immunity. Tumor necrosis factor Receptor-Associated Factor 3 (TRAF3) is a known immune regulator expressed in the retina; however, whether TRAF3 regulates retinal immunity is unknown. We have generated the first conditional NR- Traf3 knockout mouse model ( Chx10 -Cre/ Traf3
f/f ) to enable studies of neuronal TRAF3 function. Here, we evaluated NR- Traf3 depletion effects on whole retinal TRAF3 protein expression, visual acuity, and retinal structure and function. Additionally, to determine if NR- Traf3 plays a role in retinal immune regulation, we used flow cytometry to assess immune cell infiltration following acute local lipopolysaccharide (LPS) administration. Our results show that TRAF3 protein is highly expressed in the NR and establish that NR- Traf3 depletion does not affect basal retinal structure or function. Importantly, NR- Traf3 promoted LPS-stimulated retinal immune infiltration. Thus, our findings propose NR- Traf3 as a positive regulator of retinal immunity. Further, the NR- Traf3 mouse provides a tool for investigations of neuronal TRAF3 as a novel potential target for therapeutic interventions aimed at suppressing retinal inflammatory disease and may also inform treatment approaches for inflammatory neurodegenerative brain conditions.- Published
- 2021
- Full Text
- View/download PDF
28. TRAF3 in T Cells Restrains Negative Regulators of LAT to Promote TCR/CD28 Signaling.
- Author
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Arkee T, Hostager BS, Houtman JCD, and Bishop GA
- Subjects
- Animals, Cells, Cultured, HEK293 Cells, Humans, Mice, Mice, Inbred C57BL, Mice, Knockout, Mice, Transgenic, Signal Transduction immunology, TNF Receptor-Associated Factor 3 deficiency, TNF Receptor-Associated Factor 3 genetics, CD28 Antigens immunology, Receptors, Antigen, T-Cell immunology, T-Lymphocytes immunology, TNF Receptor-Associated Factor 3 immunology
- Abstract
The adaptor protein TNFR-associated factor 3 (TRAF3) is required for in vivo T cell effector functions and for normal TCR/CD28 signaling. TRAF3-mediated enhancement of TCR function requires engagement of both CD3 and CD28, but the molecular mechanisms underlying how TRAF3 interacts with and impacts TCR/CD28-mediated complexes to enhance their signaling remains an important knowledge gap. We investigated how TRAF3 is recruited to, and regulates, CD28 as a TCR costimulator. Direct association with known signaling motifs in CD28 was dispensable for TRAF3 recruitment; rather, TRAF3 associated with the CD28-interacting protein linker of activated T cells (LAT) in human and mouse T cells. TRAF3-LAT association required the TRAF3 TRAF-C domain and a newly identified TRAF2/3 binding motif in LAT. TRAF3 inhibited function of the LAT-associated negative regulatory protein Dok1, which is phosphorylated at an inhibitory tyrosine residue by the tyrosine kinase breast tumor kinase (Brk/PTK6). TRAF3 regulated Brk activation in T cells, limiting the association of protein tyrosine phosphatase 1B (PTP1B) with the LAT complex. In TRAF3-deficient cells, LAT complex-associated PTP1B was associated with dephosphorylation of Brk at an activating tyrosine residue, potentially reducing its ability to inhibit Dok1. Consistent with these findings, inhibiting PTP1B activity in TRAF3-deficient T cells rescued basal and TCR/CD28-mediated activation of Src family kinases. These results reveal a new mechanism for promotion of TCR/CD28-mediated signaling through restraint of negative regulation of LAT by TRAF3, enhancing the understanding of regulation of the TCR complex., (Copyright © 2021 by The American Association of Immunologists, Inc.)
- Published
- 2021
- Full Text
- View/download PDF
29. Does California's EMFAC2017 vehicle emissions model underpredict California light-duty gasoline vehicle NO x emissions?
- Author
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Bishop GA
- Subjects
- California, Environmental Monitoring, Gasoline analysis, Motor Vehicles, Air Pollutants analysis, Vehicle Emissions analysis
- Abstract
On-road remote sensing measurements of light and medium-duty gasoline vehicles collected within California's South Coast Air Basin since 1999 generally fall within the range of observed summer ambient molar NO
x /CO measurements collected during morning rush hours. Compared with ambient and on-road emissions, the California Air Resources Board EMFAC model underpredicts 2018 gasoline vehicle NOx emission factors by more than a factor of 2.6. Contributing to these differences is that vehicles older than model year 2006 have NOx emission deterioration rates that are up to four times higher on-road than predicted by the EMFAC model. A fuel-based inventory using the 2018 on-road gasoline emission factors for CO and NOx results in total CO emissions similar to the basin inventory but NOx emissions that are 74% higher than the inventory. The higher NOx emission estimates from on-road gasoline vehicle measurements make their contribution to the inventory slightly larger than heavy-duty diesel vehicles. We have found LEV I (1994-2003) gasoline vehicles are a major source of these on-road emissions and that significant NOx reductions in the South Coast Air Basin are being overlooked by not targeting the high emitters for removal. Implications : A comparison of ambient and on-road vehicle molar NOx /CO ratios collected in California's South Coast Air Basin with those predicted by California's EMFAC2017 vehicle emissions model shows that the model significantly underpredicts NOx emission factors for gasoline vehicles. This results in a 74% underestimate of the contribution of gasoline vehicles to the basin's NOx inventory, with the contribution from gasoline vehicles comparable to that from heavy-duty diesel trucks. This likely means that current projections for future NOx emission reductions from mobile sources in the basin will not be realized unless additional NOx reductions are obtained from older gasoline vehicles.- Published
- 2021
- Full Text
- View/download PDF
30. Epstein-Barr Functional Mimicry: Pathogenicity of Oncogenic Latent Membrane Protein-1 in Systemic Lupus Erythematosus and Autoimmunity.
- Author
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Munroe ME, Anderson JR, Gross TF, Stunz LL, Bishop GA, and James JA
- Subjects
- Animals, Antibodies, Antinuclear blood, Autoantigens administration & dosage, CD40 Antigens genetics, CD40 Antigens immunology, CD40 Antigens metabolism, Cross Reactions, Epitopes, Epstein-Barr Virus Nuclear Antigens administration & dosage, Immunization, Lupus Erythematosus, Systemic blood, Lupus Erythematosus, Systemic genetics, Mice, Inbred C57BL, Mice, Transgenic, Viral Matrix Proteins genetics, Viral Matrix Proteins metabolism, snRNP Core Proteins administration & dosage, Mice, Autoantigens immunology, Autoimmunity, Epstein-Barr Virus Nuclear Antigens immunology, Immunity, Cellular, Immunity, Humoral, Lupus Erythematosus, Systemic immunology, Molecular Mimicry, Viral Matrix Proteins immunology, snRNP Core Proteins immunology
- Abstract
Systemic lupus erythematosus (SLE) and other autoimmune diseases are propelled by immune dysregulation and pathogenic, disease-specific autoantibodies. Autoimmunity against the lupus autoantigen Sm is associated with cross-reactivity to Epstein-Barr virus (EBV) nuclear antigen 1 (EBNA-1). Additionally, EBV latent membrane protein-1 (LMP1), initially noted for its oncogenic activity, is an aberrantly active functional mimic of the B cell co-stimulatory molecule CD40. Mice expressing a transgene (Tg) for the mCD40-LMP1 hybrid molecule (containing the cytoplasmic tail of LMP1) have mild autoantibody production and other features of immune dysregulation by 2-3 months of age, but no overt autoimmune disease. This study evaluates whether exposure to the EBV molecular mimic, EBNA-1, stimulates antigen-specific and concurrently-reactive humoral and cellular immunity, as well as lupus-like features. After immunization with EBNA-1, mCD40-LMP1 Tg mice exhibited enhanced, antigen-specific, cellular and humoral responses compared to immunized WT congenic mice. EBNA-1 specific proliferative and inflammatory cytokine responses, including IL-17 and IFN-γ, were significantly increased ( p<0.0001 ) in mCD40-LMP1 Tg mice, as well as antibody responses to amino- and carboxy-domains of EBNA-1. Of particular interest was the ability of mCD40-LMP1 to drive EBNA-1 associated molecular mimicry with the lupus-associated autoantigen, Sm. EBNA-1 immunized mCD40-LMP1 Tg mice exhibited enhanced proliferative and cytokine cellular responses (p<0.0001) to the EBNA-1 homologous epitope PPPGRRP and the Sm B/B' cross-reactive sequence PPPGMRPP. When immunized with the SLE autoantigen Sm, mCD40-LMP1 Tg mice again exhibited enhanced cellular and humoral immune responses to both Sm and EBNA-1. Cellular immune dysregulation with EBNA-1 immunization in mCD40-LMP1 Tg mice was accompanied by enhanced splenomegaly, increased serum blood urea nitrogen (BUN) and creatinine levels, and elevated anti-dsDNA and antinuclear antibody (ANA) levels ( p<0.0001 compared to mCD40 WT mice). However, no evidence of immune-complex glomerulonephritis pathology was noted, suggesting that a combination of EBV and genetic factors may be required to drive lupus-associated renal disease. These data support that the expression of LMP1 in the context of EBNA-1 may interact to increase immune dysregulation that leads to pathogenic, autoantigen-specific lupus inflammation., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Munroe, Anderson, Gross, Stunz, Bishop and James.)
- Published
- 2021
- Full Text
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31. Frontline Science: CD40 signaling restricts RNA virus replication in Mϕs, leading to rapid innate immune control of acute virus infection.
- Author
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Rogers KJ, Shtanko O, Stunz LL, Mallinger LN, Arkee T, Schmidt ME, Bohan D, Brunton B, White JM, Varga SM, Butler NS, Bishop GA, and Maury W
- Subjects
- Acute Disease, Animals, CD40 Ligand metabolism, Ebolavirus physiology, Glycoproteins immunology, Humans, Interferon-gamma metabolism, Interleukin-12 biosynthesis, Mice, Inbred C57BL, Models, Biological, Peritoneum pathology, Peritoneum virology, TNF Receptor-Associated Factor 6 metabolism, Virus Diseases virology, Mice, CD40 Antigens metabolism, Immunity, Innate, Macrophages immunology, Macrophages virology, RNA Viruses physiology, Signal Transduction, Virus Diseases immunology, Virus Replication physiology
- Abstract
Many acute viral infections target tissue Mϕs, yet the mechanisms of Mϕ-mediated control of viruses are poorly understood. Here, we report that CD40 expressed by peritoneal Mϕs restricts early infection of a broad range of RNA viruses. Loss of CD40 expression enhanced virus replication as early as 12-24 h of infection and, conversely, stimulation of CD40 signaling with an agonistic Ab blocked infection. With peritoneal cell populations infected with the filovirus, wild-type (WT) Ebola virus (EBOV), or a BSL2 model virus, recombinant vesicular stomatitis virus encoding Ebola virus glycoprotein (rVSV/EBOV GP), we examined the mechanism conferring protection. Here, we demonstrate that restricted virus replication in Mϕs required CD154/CD40 interactions that stimulated IL-12 production through TRAF6-dependent signaling. In turn, IL-12 production resulted in IFN-γ production, which induced proinflammatory polarization of Mϕs, protecting the cells from infection. These CD40-dependent events protected mice against virus challenge. CD40
-/- mice were exquisitely sensitive to intraperitoneal challenge with a dose of rVSV/EBOV GP that was sublethal to CD40+/+ mice, exhibiting viremia within 12 h of infection and rapidly succumbing to infection. This study identifies a previously unappreciated role for Mϕ-intrinsic CD40 signaling in controlling acute virus infection., (©2020 Society for Leukocyte Biology.)- Published
- 2021
- Full Text
- View/download PDF
32. TNF receptor-associated factor 3 restrains B-cell receptor signaling in normal and malignant B cells.
- Author
-
Whillock AL, Ybarra TK, and Bishop GA
- Subjects
- Agammaglobulinaemia Tyrosine Kinase metabolism, Animals, B-Lymphocytes immunology, B-Lymphocytes metabolism, CD79 Antigens metabolism, Female, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, Phosphorylation, Receptors, Antigen, B-Cell genetics, Signal Transduction genetics, Syk Kinase metabolism, T-Lymphocytes metabolism, TNF Receptor-Associated Factor 2 metabolism, TNF Receptor-Associated Factor 3 genetics, Receptors, Antigen, B-Cell metabolism, TNF Receptor-Associated Factor 3 metabolism
- Abstract
TRAF3 has diverse signaling functions, which vary by cell type. Uniquely in B lymphocytes, TRAF3 inhibits homeostatic survival. Highlighting the role of TRAF3 as a tumor suppressor, loss-of-function TRAF3 mutations are associated with human B-cell malignancies, while B-cell-specific deletion of TRAF3 in mice leads to autoimmunity and lymphoma development. The role of TRAF3 in inhibiting noncanonical NF-κB activation, CD40 and BAFF-R signaling to B cells is well documented. In contrast, TRAF3 enhances many T-cell effector functions, through associating with and enhancing signaling by the T-cell receptor (TCR)-CD28 complex. The present study was designed to determine the role of TRAF3 in signaling via the B-cell antigen receptor (BCR). The BCR is crucial for antigen recognition, survival, proliferation, and antibody production, and defects in BCR signaling can promote abnormal survival of malignant B cells. Here, we show that TRAF3 is associated with both CD79B and the BCR-activated kinases Syk and Btk following BCR stimulation. BCR-induced phosphorylation of Syk and additional downstream kinases was increased in TRAF3
-/- B cells, with regulation observed in both follicular and marginal zone B-cell subsets. BCR stimulation of TRAF3-/- B cells resulted in increased surface expression of MHC-II, CD80, and CD86 molecules. Interestingly, increased survival of TRAF3-/- primary B cells was resistant to inhibition of Btk, while TRAF3-deficient malignant B-cell lines showed enhanced sensitivity. TRAF3 serves to restrain normal and malignant BCR signaling, with important implications for its role in normal B-cell biology and abnormal survival of malignant B cells., Competing Interests: Conflict of interest The authors declare no competing financial or nonfinancial interests., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
33. Vehicle Exhaust Remote Sensing Device Method to Screen Vehicles for Evaporative Running Loss Emissions.
- Author
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Bishop GA, DeFries TH, Sidebottom JA, and Kemper JM
- Subjects
- Environmental Monitoring, Los Angeles, Motor Vehicles, Remote Sensing Technology, Vehicle Emissions analysis, Air Pollutants analysis, Running
- Abstract
Vehicle hydrocarbon (HC) emissions can be emitted from either tailpipe or nontailpipe locations, and understanding their fleet apportionment is important for a successful air pollution policy. Vehicles initially misidentified as having elevated tailpipe HC emissions first indicated that roadside exhaust sensors could detect the presence of evaporative HC emissions as increased noise in the HC/carbon dioxide (CO
2 ) correlation measurement. The 90th percentile of the largest residual of the HC/CO2 correlation is defined as a running loss index (RLI) for each measurement. An RLI that is three standard deviations or greater above the instrument noise indicates possible evaporative running loss emissions with the probability increasing with larger RLI values. Two databases of vehicle emission measurements previously collected in West Los Angeles in 2013 and 2015 were screened using this method. The screening estimated that 0.09% (31/33,806) and 0.18% (49/27,413) of the attempted measurements indicated evaporative running loss emissions from a 9-year-old fleet. California LEV I certified vehicles (1994-2003 model years) accounted for the largest age group for both. The minimum detection limits for the instrument used were estimated at 2.8 and 1.6 g/mile on a propane basis for the 2013 and 2015 data, respectively, or 32-56 times the Federal Tier 2 and Tier 3 standards of 0.05 g/mile.- Published
- 2020
- Full Text
- View/download PDF
34. TRAF family molecules in T cells: Multiple receptors and functions.
- Author
-
Arkee T and Bishop GA
- Subjects
- Animals, CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes pathology, CD8-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes pathology, Disease Models, Animal, Gene Expression Regulation, Humans, Immunologic Deficiency Syndromes immunology, Immunologic Deficiency Syndromes pathology, Immunologic Memory, Mice, Mice, Knockout, Protein Isoforms deficiency, Protein Isoforms genetics, Protein Isoforms immunology, Receptors, Tumor Necrosis Factor immunology, Signal Transduction immunology, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins deficiency, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins immunology, Tumor Necrosis Factor-alpha immunology, Immunologic Deficiency Syndromes genetics, Receptors, Tumor Necrosis Factor genetics, Signal Transduction genetics, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins genetics, Tumor Necrosis Factor-alpha genetics
- Abstract
The TNFR superfamily of receptors, the major focus of the recent TNFR Superfamily Conference held in June 2019, employ the TNFR-associated factor (TRAF) family of adaptor proteins in key aspects of their signaling pathways. Although many early studies investigated TRAF functions via exogenous overexpression in nonhematopoietic cell lines, it has subsequently become clear that whereas TRAFs share some overlap in function, each also plays unique biologic roles, that can be highly context dependent. This brief review summarizes the current state of knowledge of functions of each of the TRAF molecules that mediate important functions in T lymphocytes: TRAFs 1, 2, 3, 5, and 6. Due to our current appreciation of the contextual nature of TRAF function, our focus is upon findings made specifically in T lymphocytes. Key T cell functions for each TRAF are detailed, as well as future knowledge gaps of interest and importance., (©2019 Society for Leukocyte Biology.)
- Published
- 2020
- Full Text
- View/download PDF
35. Author Correction: TRAF3 regulates the oncogenic proteins Pim2 and c-Myc to restrain survival in normal and malignant B cells.
- Author
-
Whillock AL, Mambetsariev N, Lin WW, Stunz LL, and Bishop GA
- Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
- Published
- 2019
- Full Text
- View/download PDF
36. Alloactivation of Naïve CD4 + CD8 - CD25 + T Regulatory Cells: Expression of CD8α Identifies Potent Suppressor Cells That Can Promote Transplant Tolerance Induction.
- Author
-
Verma ND, Robinson CM, Carter N, Wilcox P, Tran GT, Wang C, Sharland A, Nomura M, Plain KM, Bishop GA, Hodgkinson SJ, and Hall BM
- Subjects
- Animals, Gene Expression Regulation drug effects, Interleukin-2 pharmacology, Rats, Rats, Inbred Lew, CD8 Antigens immunology, Gene Expression Regulation immunology, Isoantigens immunology, Lymphocyte Activation, T-Lymphocytes, Regulatory immunology, Transplantation Tolerance
- Abstract
Therapy with alloantigen-specific CD4
+ CD25+ T regulatory cells (Treg) for induction of transplant tolerance is desirable, as naïve thymic Treg (tTreg) are not alloantigen-specific and are weak suppressor cells. Naïve tTreg from DA rats cultured with fully allogeneic PVG stimulator cells in the presence of rIL-2 express IFN-gamma receptor (IFNGR) and IL-12 receptor beta2 (IL-12Rβ2) and are more potent alloantigen-specific regulators that we call Ts1 cells. This study examined additional markers that could identify the activated alloantigen-specific Treg as a subpopulation within the CD4+ CD25+ Foxp3+ Treg. After culture of naïve DA CD4+ CD8- CD25+ T cells with rIL-2 and PVG alloantigen, or rIL-2 without alloantigen, CD8α was expressed on 10-20% and CD8β on <5% of these cells. These cells expressed ifngr and Il12rb2 . CD8α+ cells had increased Ifngr that characterizes Ts1 cells as well was Irf4 , a transcription factor induced by TCR activation. Proliferation induced by re-culture with rIL-12 and alloantigen was greater with CD4+ CD8α+ CD25+ Treg consistent with the CD8α+ cells expressing IL-12R. In MLC, the CD8α+ fraction suppressed responses against allogeneic stimulators more than the mixed Ts1 population, whereas the CD4+ CD8- CD25+ T cells were less potent. In an adoptive transfer assay, rIL-2 and alloantigen activated Treg suppress rejection at a ratio of 1:10 with naïve effector cells, whereas alloantigen and rIL-2 activated tTreg depleted of the CD8α+ cells were much less effective. This study demonstrated that expression of CD8α by rIL-2 and alloantigen activation of CD4+ CD8- CD25+ Foxp3+ T cells was a marker of activated and potent Treg that included alloantigen-specific Treg., (Copyright © 2019 Verma, Robinson, Carter, Wilcox, Tran, Wang, Sharland, Nomura, Plain, Bishop, Hodgkinson and Hall.)- Published
- 2019
- Full Text
- View/download PDF
37. TRAF3 regulates the oncogenic proteins Pim2 and c-Myc to restrain survival in normal and malignant B cells.
- Author
-
Whillock AL, Mambetsariev N, Lin WW, Stunz LL, and Bishop GA
- Subjects
- Animals, B-Lymphocytes metabolism, Cell Line, Tumor, Cell Survival, Humans, Mice, Phosphorylation, STAT3 Transcription Factor metabolism, TNF Receptor-Associated Factor 3 deficiency, Gene Expression Regulation, Neoplastic, Protein Serine-Threonine Kinases metabolism, Proto-Oncogene Proteins metabolism, Proto-Oncogene Proteins c-myc metabolism, TNF Receptor-Associated Factor 3 metabolism
- Abstract
TRAF3 is a versatile intracellular adapter protein with multiple context-specific roles. Uniquely in B cells, TRAF3 deficiency enhances survival and increases the risk of transformation, as loss of TRAF3 is observed in several types of B cell cancers. Here, we report a new mechanism for TRAF3 in the restraint of B cell survival. We found that TRAF3 deficiency was associated with induction of the pro-survival kinase Pim2 in mouse primary B cells and human malignant B cell lines. The increase in Pim2 was independent of NF-κB2 activation but was ameliorated with inhibition of STAT3 expression or function. TRAF3 deficiency also led to a Pim2-dependent increase in c-Myc protein levels and was associated with reduced c-Myc ubiquitination. TRAF3-deficient primary B cells were less sensitive to cell death induced by the Pim inhibitors SGI-1776 and TP-3654. Interestingly, human malignant B cell lines with low expression of TRAF3 were more sensitive to Pim inhibition-induced cell death. Combination treatment of TRAF3-deficient B cells and B cell tumor lines with c-Myc inhibitors enhanced their sensitivity to Pim inhibition, suggesting a possible therapeutic strategy. TRAF3 thus suppresses a Pim2-mediated B cell survival axis, which can be a potential target for treatment of B cell malignancies.
- Published
- 2019
- Full Text
- View/download PDF
38. Three decades of on-road mobile source emissions reductions in South Los Angeles.
- Author
-
Bishop GA
- Subjects
- Air Pollution analysis, Environmental Monitoring, Los Angeles, Motor Vehicles, Air Pollutants analysis, Ammonia analysis, Carbon Monoxide analysis, Hydrocarbons analysis, Vehicle Emissions analysis
- Abstract
In May 2018, the University of Denver repeated on-road optical remote sensing measurements at two locations in Lynwood, CA. Lynwood area vehicle tailpipe emissions were first surveyed in 1989 and 1991 because the area suffered from a large number of carbon monoxide (CO) air quality violations. These new measurements allow for the estimation of fuel-specific CO and total hydrocarbon (HC) emissions reductions, changes in the longevity of emission-control components, and the prevalence of high emitters in the current fleet. Since 1989 CO emissions decreased approximately factors of 10 (120 ± 8 to 12.3 ± 0.2 gCO/kg of fuel) and 20 (210 ± 8 to 10.4 ± 0.4 gCO/kg of fuel) at our I-710/Imperial Highway and Long Beach Blvd. sites, respectively. These reductions are also reflected in the local ambient air measurements. Tailpipe HC emissions have decreased by a factor of 25 (50 ± 4 to 2.1 ± 0.3 gHC/kg of fuel) since 1991 at the Long Beach Blvd. location. The decreases are so dramatic that the vast majority of vehicles now have HC measurements that are indistinguishable from zero. The decreases have increased the skewedness of the emissions distribution with the 99th percentile now responsible for more than 37% (CO) and 28% (HC) of the totals. Ammonia emissions collected in 2018 at both Lynwood locations peak with 20-year-old vehicles (1998 models), indicating long lifetimes for catalytic converters. In 1989 and 1991, the on-road Lynwood fleets had significantly higher emissions than fleets observed in other locations within the South Coast Air Basin. The 2018 fleets now have means and emissions by model year that are consistent with those observed at other sites in Los Angeles and the U.S. This indicates that modern vehicle combustion management and after-treatment systems are achieving their goals regardless of community income levels. Implications : Recent on-road vehicle emission measurements at two locations in the Lynwood, CA area, first visited in 1989, found significant fuel specific CO and HC emission reductions. CO emissions have decreased by a factor of 10 and 20 at each location and HC emissions have declined by a factor of 25. This has increased the skewedness in both species emissions distribution. The 2018 fleets have means and emissions by model year that are now consistent with those observed at other U.S. sites indicating that modern vehicle emissions control advancements are achieving their goals regardless of community income levels.
- Published
- 2019
- Full Text
- View/download PDF
39. Targeting glycogen synthase kinase 3 for therapeutic benefit in lymphoma.
- Author
-
Wu X, Stenson M, Abeykoon J, Nowakowski K, Zhang L, Lawson J, Wellik L, Li Y, Krull J, Wenzl K, Novak AJ, Ansell SM, Bishop GA, Billadeau DD, Peng KW, Giles F, Schmitt DM, and Witzig TE
- Subjects
- Animals, Biomarkers, Tumor, Cell Cycle Checkpoints drug effects, Cell Cycle Checkpoints genetics, Cell Line, Tumor, Cell Proliferation genetics, Cell Survival genetics, Disease Models, Animal, Gene Expression, Gene Targeting methods, Glycogen Synthase Kinase 3 antagonists & inhibitors, Glycogen Synthase Kinase 3 metabolism, Glycogen Synthase Kinase 3 beta genetics, Glycogen Synthase Kinase 3 beta metabolism, Humans, Indoles pharmacology, Lymphoma diagnosis, Lymphoma mortality, Lymphoma therapy, Maleimides pharmacology, Mice, Mice, Transgenic, Mitosis drug effects, Mitosis genetics, Spindle Apparatus drug effects, Treatment Outcome, Xenograft Model Antitumor Assays, Glycogen Synthase Kinase 3 genetics, Lymphoma etiology, Molecular Targeted Therapy adverse effects, Molecular Targeted Therapy methods
- Abstract
Targeting the B-cell receptor and phosphatidylinositol 3-kinase/mTOR signaling pathways has shown meaningful, but incomplete, antitumor activity in lymphoma. Glycogen synthase kinase 3 (GSK3) α and β are 2 homologous and functionally overlapping serine/threonine kinases that phosphorylate multiple protein substrates in several key signaling pathways. To date, no agent targeting GSK3 has been approved for lymphoma therapy. We show that lymphoma cells abundantly express GSK3α and GSK3β compared with normal B and T lymphocytes at the messenger RNA and protein levels. Utilizing a new GSK3 inhibitor 9-ING-41 and by genetic deletion of GSK3α and GSK3β genes using CRISPR/CAS9 knockout, GSK3 was demonstrated to be functionally important to lymphoma cell growth and proliferation. GSK3β binds to centrosomes and microtubules, and lymphoma cells treated with 9-ING-41 become arrested in mitotic prophase, supporting the notion that GSK3β is necessary for the progression of mitosis. By analyzing recently published RNA sequencing data on 234 diffuse large B-cell lymphoma patients, we found that higher expression of GSK3α or GSK3β correlates well with shorter overall survival. These data provide rationale for testing GSK3 inhibitors in lymphoma patient trials.
- Published
- 2019
- Full Text
- View/download PDF
40. Colorado State University, Pet Hospice Program.
- Author
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Gore M, Lana SE, and Bishop GA
- Subjects
- Animals, Colorado, Curriculum, Education, Veterinary, Pain prevention & control, Pets, Universities, Hospice Care, Pain veterinary, Veterinary Medicine trends
- Abstract
Serving clients since 2004, Colorado State University's Veterinary Teaching Hospital is the first and only program to offer a student-run pet hospice program. Under the supervision of faculty and staff advisors, student volunteers provide home hospice care to families who have a terminally ill pet. This article describes the history of the program, how it is organized, the roles and responsibilities of the students, the challenges of the program and future goals. This article seeks to serve as a follow up on the 2008 Journal of Veterinary Medical Education article on the Colorado State University pet hospice program., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
41. Dendritic cell NLRC4 regulates influenza A virus-specific CD4 T cell responses through FasL expression.
- Author
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Hornick EE, Dagvadorj J, Zacharias ZR, Miller AM, Langlois RA, Chen P, Legge KL, Bishop GA, Sutterwala FS, and Cassel SL
- Subjects
- Animals, Apoptosis Regulatory Proteins genetics, CD4-Positive T-Lymphocytes pathology, CD8-Positive T-Lymphocytes immunology, Calcium-Binding Proteins genetics, Dendritic Cells pathology, Fas Ligand Protein genetics, Lung pathology, Mice, Mice, Knockout, Orthomyxoviridae Infections pathology, Apoptosis Regulatory Proteins immunology, CD4-Positive T-Lymphocytes immunology, Calcium-Binding Proteins immunology, Dendritic Cells immunology, Fas Ligand Protein immunology, Gene Expression Regulation immunology, Influenza A virus immunology, Lung immunology, Orthomyxoviridae Infections immunology
- Abstract
Influenza A virus (IAV)-specific T cell responses are important correlates of protection during primary and subsequent infections. Generation and maintenance of robust IAV-specific T cell responses relies on T cell interactions with dendritic cells (DCs). In this study, we explore the role of nucleotide-binding domain leucine-rich repeat containing receptor family member NLRC4 in modulating the DC phenotype during IAV infection. Nlrc4-/- mice had worsened survival and increased viral titers during infection, normal innate immune cell recruitment and IAV-specific CD8 T cell responses, but severely blunted IAV-specific CD4 T cell responses compared to wild-type mice. The defect in the pulmonary IAV-specific CD4 T cell response was not a result of defective priming or migration of these cells in Nlrc4-/- mice but was instead due to an increase in FasL+ DCs, resulting in IAV-specific CD4 T cell death. Together, our data support a novel role for NLRC4 in regulating the phenotype of lung DCs during a respiratory viral infection, and thereby influencing the magnitude of protective T cell responses.
- Published
- 2019
- Full Text
- View/download PDF
42. Staphylococcal Superantigens Stimulate Epithelial Cells through CD40 To Produce Chemokines.
- Author
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Schlievert PM, Cahill MP, Hostager BS, Brosnahan AJ, Klingelhutz AJ, Gourronc FA, Bishop GA, and Leung DYM
- Subjects
- Bacterial Toxins metabolism, CD40 Antigens genetics, Cells, Cultured, Enterotoxins metabolism, Gene Knockout Techniques, Humans, CD40 Antigens metabolism, Chemokines metabolism, Epithelial Cells immunology, Epithelial Cells microbiology, Staphylococcus aureus physiology, Superantigens metabolism
- Abstract
Mucosal and skin tissues form barriers to infection by most bacterial pathogens. Staphylococcus aureus causes diseases across these barriers in part dependent on the proinflammatory properties of superantigens. We showed, through use of a CRISPR-Cas9 CD40 knockout, that the superantigens toxic shock syndrome toxin 1 (TSST-1) and staphylococcal enterotoxins (SEs) B and C stimulated chemokine production from human vaginal epithelial cells (HVECs) through human CD40. This response was enhanced by addition of antibodies against CD40 through an unknown mechanism. TSST-1 was better able to stimulate chemokine (IL-8 and MIP-3α) production by HVECs than SEB and SEC, suggesting this is the reason for TSST-1's exclusive association with menstrual TSS. A mutant of TSST-1, K121A, caused TSS in a rabbit model when administered vaginally but not intravenously, emphasizing the importance of the local vaginal environment. Collectively, our data suggested that superantigens facilitate infections by disruption of mucosal barriers through their binding to CD40, with subsequent expression of chemokines. The chemokines facilitate TSS and possibly other epithelial conditions after attraction of the adaptive immune system to the local environment. IMPORTANCE Menstrual toxic shock syndrome (TSS) is a serious infectious disease associated with vaginal colonization by Staphylococcus aureus producing the exotoxin TSS toxin 1 (TSST-1). We show that menstrual TSS occurs after TSST-1 interaction with an immune costimulatory molecule called CD40 on the surface of vaginal epithelial cells. Other related toxins, where the entire family is called the superantigen family, bind to CD40, but not with a high-enough apparent affinity to cause TSS; thus, TSST-1 is the only exotoxin superantigen associated. Once the epithelial cells become activated by TSST-1, they produce soluble molecules referred to as chemokines, which in turn facilitate TSST-1 activation of T lymphocytes and macrophages to cause the symptoms of TSS. Identification of small-molecule inhibitors of the interaction of TSST-1 with CD40 may be useful so that they may serve as additives to medical devices, such as tampons and menstrual cups, to reduce the incidence of menstrual TSS., (Copyright © 2019 Schlievert et al.)
- Published
- 2019
- Full Text
- View/download PDF
43. Editorial: TRAF Proteins in Health and Disease.
- Author
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Bishop GA, Abdul-Sater AA, and Watts TH
- Subjects
- Arthritis genetics, Arthritis metabolism, Humans, Neoplasms genetics, Neoplasms metabolism, Protein Isoforms genetics, Protein Isoforms immunology, Protein Isoforms metabolism, Signal Transduction genetics, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins genetics, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins metabolism, Arthritis immunology, Multigene Family, Neoplasms immunology, Signal Transduction immunology, Tumor Necrosis Factor Receptor-Associated Peptides and Proteins immunology
- Published
- 2019
- Full Text
- View/download PDF
44. Evaluation of Heavy- and Medium-Duty On-Road Vehicle Emissions in California's South Coast Air Basin.
- Author
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Haugen MJ, Bishop GA, Thiruvengadam A, and Carder DK
- Subjects
- California, Chicago, Environmental Monitoring, Motor Vehicles, Air Pollutants, Vehicle Emissions
- Abstract
Emission measurements were collected from heavy-duty (HDVs) and medium-duty vehicles (MDVs) at the Peralta weigh station long-term measurement site near Anaheim, CA, in 2017. Two Fuel Efficiency Automobile Test units sampled elevated and ground-level exhaust vehicles totaling 2 315 measurements. HDVs (1844 measurements) exhibited historical reductions in fuel specific oxides of nitrogen (NO
x ) from the 2008 measurements (55%) with increased use of exhaust gas recirculation and selective catalytic reduction systems. However, as these technologies have aged, the in-use benefits have declined. Infrared % opacity measurements of tailpipe soot decreased 14% since 2012 with increased diesel particulate filter (DPF) use, DPF longevity, and fleet turnover. Sixty-three percent of the HDV fleet in 2017 was chassis model year 2011+ compared to only 12% in 2012. The observed MDV fleet (471 measurements) was 1.4 years older than the HDV fleet with average NOx 14% higher. A significant reduction in MDV NOx occurred ∼2 model years prior to similar HDV reductions (2014 versus 2016 chassis model year). MDV chassis model years 2014+ were able to meet their corresponding NOx laboratory certification standards in-use, whereas HDVs remain slightly above this threshold. Similar MDV NOx emission trends were also observed in data previously collected in Chicago, IL.- Published
- 2018
- Full Text
- View/download PDF
45. TRAF3 as a Multifaceted Regulator of B Lymphocyte Survival and Activation.
- Author
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Bishop GA, Stunz LL, and Hostager BS
- Subjects
- Animals, Cell Survival immunology, Humans, Mice, Mice, Knockout, NF-kappa B immunology, B-Lymphocytes immunology, Lymphocyte Activation, Signal Transduction immunology, TNF Receptor-Associated Factor 3 immunology, Tumor Suppressor Proteins immunology
- Abstract
The adaptor protein TNF receptor-associated factor 3 (TRAF3) serves as a powerful negative regulator in multiple aspects of B cell biology. Early in vitro studies in transformed cell lines suggested the potential of TRAF3 to inhibit signaling by its first identified binding receptor, CD40. However, because the canonical TRAF3 binding site on many receptors also mediates binding of other TRAFs, and whole-mouse TRAF3 deficiency is neonatally lethal, an accurate understanding of TRAF3's specific functions was delayed until conditional TRAF3-deficient mice were produced. Studies of B cell-specific TRAF3-deficient mice, complemented by investigations in normal and malignant mouse and human B cells, reveal that TRAF3 has powerful regulatory roles that are unique to this TRAF, as well as functions context-specific to the B cell. This review summarizes the current state of knowledge of these roles and functions. These include inhibition of signaling by plasma membrane receptors, negative regulation of intracellular receptors, and restraint of cytoplasmic NF- κB pathways. TRAF3 is also now known to function as a resident nuclear protein, and to impact B cell metabolism. Through these and additional mechanisms TRAF3 exerts powerful restraint upon B cell survival and activation. It is thus perhaps not surprising that TRAF3 has been revealed as an important tumor suppressor in B cells. The many and varied functions of TRAF3 in B cells, and new directions to pursue in future studies, are summarized and discussed here.
- Published
- 2018
- Full Text
- View/download PDF
46. Direct recognition of hepatocyte-expressed MHC class I alloantigens is required for tolerance induction.
- Author
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Paul-Heng M, Leong M, Cunningham E, Bunker DLJ, Bremner K, Wang Z, Wang C, Tay SS, McGuffog C, Logan GJ, Alexander IE, Hu M, Alexander SI, Sparwasser TD, Bertolino P, Bowen DG, Bishop GA, and Sharland A
- Subjects
- Allografts cytology, Allografts immunology, Allografts metabolism, Animals, CD8-Positive T-Lymphocytes immunology, Dependovirus genetics, Disease Models, Animal, Epitopes, T-Lymphocyte genetics, Epitopes, T-Lymphocyte immunology, Epitopes, T-Lymphocyte metabolism, Genetic Vectors genetics, Graft Survival immunology, Hepatocytes metabolism, Histocompatibility Antigens Class I genetics, Histocompatibility Antigens Class I metabolism, Humans, Isoantigens genetics, Isoantigens metabolism, Liver cytology, Liver immunology, Liver metabolism, Liver Transplantation adverse effects, Male, Mice, Mice, Transgenic, Point Mutation, T-Lymphocytes, Regulatory immunology, Transduction, Genetic, Graft Rejection immunology, Hepatocytes immunology, Histocompatibility Antigens Class I immunology, Immune Tolerance, Isoantigens immunology
- Abstract
Adeno-associated viral vector-mediated (AAV-mediated) expression of allogeneic major histocompatibility complex class I (MHC class I) in recipient liver induces donor-specific tolerance in mouse skin transplant models in which a class I allele (H-2Kb or H-2Kd) is mismatched between donor and recipient. Tolerance can be induced in mice primed by prior rejection of a donor-strain skin graft, as well as in naive recipients. Allogeneic MHC class I may be recognized by recipient T cells as an intact molecule (direct recognition) or may be processed and presented as an allogeneic peptide in the context of self-MHC (indirect recognition). The relative contributions of direct and indirect allorecognition to tolerance induction in this setting are unknown. Using hepatocyte-specific AAV vectors encoding WT allogeneic MHC class I molecules, or class I molecules containing a point mutation (D227K) that impedes direct recognition of intact allogeneic MHC class I by CD8+ T cells without hampering the presentation of processed peptides derived from allogeneic MHC class I, we show here that tolerance induction depends upon recognition of intact MHC class I. Indirect recognition alone yielded a modest prolongation of subsequent skin graft survival, attributable to the generation of CD4+ Tregs, but it was not sufficient to induce tolerance.
- Published
- 2018
- Full Text
- View/download PDF
47. The Story of Ever Diminishing Vehicle Tailpipe Emissions as Observed in the Chicago, Illinois Area.
- Author
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Bishop GA and Haugen MJ
- Subjects
- Carbon Monoxide, Chicago, Illinois, Air Pollutants, Vehicle Emissions
- Abstract
The University of Denver has collected on-road fuel specific vehicle emissions measurements in the Chicago area since 1989. This nearly 30 year record illustrates the large reductions in light-duty vehicle tailpipe emissions and the remarkable improvements in emissions control durability to maintain low emissions over increasing periods of time. Since 1989 fuel specific carbon monoxide (CO) emissions have been reduced by an order of magnitude and hydrocarbon (HC) emissions by more than a factor of 20. Nitric oxide (NO) emissions have only been collected since 1997 but have seen reductions of 79%. This has increased the skewness of the emissions distribution where the 2016 fleet's 99th percentile contributes ∼3 times more of the 1990 total for CO and HC emissions. There are signs that these reductions may be leveling out as the emissions durability of Tier 2 vehicles in use today has almost eliminated the emissions reduction benefit of fleet turnover. Since 1997, the average age of the Chicago on-road fleet has increased 2 model years and the percentage of passenger vehicles has dropped from 71 to 52% of the fleet. Emissions are now so well controlled that the influence of driving mode has been completely eliminated as a factor for fuel specific CO and NO emissions.
- Published
- 2018
- Full Text
- View/download PDF
48. Long-Term Fuel-Specific NO x and Particle Emission Trends for In-Use Heavy-Duty Vehicles in California.
- Author
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Haugen MJ and Bishop GA
- Subjects
- California, Environmental Monitoring, Los Angeles, Motor Vehicles, Soot, Air Pollutants, Vehicle Emissions
- Abstract
Two California heavy-duty fleets have been measured in 2013, 2015, and 2017 using the On-Road Heavy-Duty Measurement System. The Port of Los Angeles drayage fleet has increased in age by 3.3 model years (4.2-7.5 years old) since 2013, with little fleet turnover. Large increases in fuel-specific particle emissions (PM) observed in 2015 were reversed in 2017, returning to near 2013 levels, suggesting repairs and or removal of high emitting vehicles. Fuel-specific oxides of nitrogen (NO
x ) emissions of this fleet have increased, and NOx after-treatment systems do not appear to perform ideally in this setting. At the Cottonwood weigh station in northern California, the fleet age has declined (7.8 to 6 years old) since 2013 due to fleet turnover, significantly lowering the average fuel-specific emissions for PM (-87%), black carbon (-76%), and particle number (-64%). Installations of retrofit-diesel particulate filters in model year 2007 and older vehicles have further decreased particle emissions. Cottonwood fleet fuel-specific NOx emissions have decreased slightly (-8%) during this period; however, newer technology vehicles with selective catalytic reduction systems (SCR) promise an additional factor of 4-5 further reductions in the long-haul fleet emissions as California transitions to an all SCR-equipped fleet.- Published
- 2018
- Full Text
- View/download PDF
49. Nlrp12 Mediates Adverse Neutrophil Recruitment during Influenza Virus Infection.
- Author
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Hornick EE, Banoth B, Miller AM, Zacharias ZR, Jain N, Wilson ME, Gibson-Corley KN, Legge KL, Bishop GA, Sutterwala FS, and Cassel SL
- Subjects
- Animals, Capillary Permeability genetics, Chemokine CXCL1 genetics, Dendritic Cells immunology, Female, Lung immunology, Lung pathology, Lung virology, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Knockout, Orthomyxoviridae Infections mortality, Orthomyxoviridae Infections virology, RNA Stability genetics, RNA, Messenger genetics, Chemokine CXCL1 metabolism, Influenza A virus immunology, Intracellular Signaling Peptides and Proteins genetics, Neutrophil Infiltration immunology, Neutrophils immunology, Orthomyxoviridae Infections immunology
- Abstract
Exaggerated inflammatory responses during influenza A virus (IAV) infection are typically associated with severe disease. Neutrophils are among the immune cells that can drive this excessive and detrimental inflammation. In moderation, however, neutrophils are necessary for optimal viral control. In this study, we explore the role of the nucleotide-binding domain leucine-rich repeat containing receptor family member Nlrp12 in modulating neutrophilic responses during lethal IAV infection. Nlrp12
-/- mice are protected from lethality during IAV infection and show decreased vascular permeability, fewer pulmonary neutrophils, and a reduction in levels of neutrophil chemoattractant CXCL1 in their lungs compared with wild-type mice. Nlrp12-/- neutrophils and dendritic cells within the IAV-infected lungs produce less CXCL1 than their wild-type counterparts. Decreased CXCL1 production by Nlrp12-/- dendritic cells was not due to a difference in CXCL1 protein stability, but instead to a decrease in Cxcl1 mRNA stability. Together, these data demonstrate a previously unappreciated role for Nlrp12 in exacerbating the pathogenesis of IAV infection through the regulation of CXCL1-mediated neutrophilic responses., (Copyright © 2018 by The American Association of Immunologists, Inc.)- Published
- 2018
- Full Text
- View/download PDF
50. TRAF3 regulation of inhibitory signaling pathways in B and T lymphocytes by kinase and phosphatase localization.
- Author
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Wallis AM and Bishop GA
- Abstract
This brief review presents current understanding of how the signaling adapter protein TRAF3 can both induce and block inhibitory signaling pathways in B and T lymphocytes, via association with kinases and phosphatases, and subsequent regulation of their localization within the cell. In B lymphocytes, signaling through the interleukin 6 receptor (IL-6R) induces association of TRAF3 with IL-6R-associated JAK1, to which TRAF3 recruits the phosphatase PTPN22 (protein tyrosine phosphatase number 22) to dephosphorylate JAK1 and STAT3, inhibiting IL-6R signaling. An important biological consequence of this inhibition is restraining the size of the plasma cell compartment, as their differentiation is IL-6 dependent. Similarly, in T lymphocytes, interleukin 2 receptor (IL-2R) signaling recruits TRAF3, which in turn recruits the phosphatase TCPTP (T cell protein tyrosine phosphatase) to dephosphorylate JAK3. The resulting inhibition of IL-2R signaling limits the IL-2-dependent size of the T regulatory cell (Treg) compartment. TRAF3 also inhibits type 1 IFN receptor (IFNαR) signaling to T cells by this mechanism, restraining expression of IFN-stimulated gene expression. In contrast, TRAF3 association with two inhibitors of TCR signaling, C-terminal Src kinase (Csk) and PTPN22, promotes their localization to the cytoplasm, away from the membrane TCR complex. TRAF3 thus enhances TCR signaling and downstream T cell activation. Implications are discussed for these regulatory roles of TRAF3 in lymphocytes, as well as potential future directions., (©2018 Society for Leukocyte Biology.)
- Published
- 2018
- Full Text
- View/download PDF
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