15 results on '"Birgit van Dooijeweert"'
Search Results
2. Untargeted metabolic profiling in dried blood spots identifies disease fingerprint for pyruvate kinase deficiency
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Birgit van Dooijeweert, Melissa H. Broeks, Nanda M. Verhoeven-Duif, Eduard J. van Beers, Edward E.S. Nieuwenhuis, Wouter W. van Solinge, Marije Bartels, Judith J. Jans, and Richard van Wijk
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
The diagnostic evaluation and clinical characterization of rare hereditary anemia (RHA) is to date still challenging. In particular, there is little knowledge of the broad metabolic impact of many of the molecular defects underlying RHA. In this study we explored the potential of untargeted metabolomics to diagnose a relatively common type of RHA: pyruvate kinase deficiency (PKD). In total, 1,903 unique metabolite features were identified in dried blood spot samples from 16 PKD patients and 32 healthy controls. A metabolic fingerprint was identified using a machine learning algorithm, and subsequently a binary classification model was designed. The model showed high performance characteristics (AUC 0.990, 95% CI: 0.981-0.999) and an accurate class assignment was achieved for all newly added control (n=13) and patient samples, (n=6) with the exception of one patient (accuracy 94%). Important metabolites in the metabolic fingerprint included glycolytic intermediates, polyamines and several acyl carnitines. In general, the application of untargeted metabolomics in dried blood spots is a novel functional tool that holds promise for the diagnostic stratification and studies on the disease pathophysiology in RHA.
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- 2020
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3. Transfusion burden in early childhood plays an important role in iron overload in Diamond-Blackfan anaemia
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Jonathan R. A. de Wilde, Birgit van Dooijeweert, Annelies J. van Vuren, Elise J. Huisman, Frans J. Smiers, Arian van der Veer, Richard van Wijk, Wouter W. van Solinge, Edward E. S. Nieuwenhuis, Eduard J. van Beers, Marije Bartels, Kindergeneeskunde, MUMC+: MA Medische Staf Kindergeneeskunde (9), RS: FHML non-thematic output, and Pediatrics
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In Diamond-Blackfan anaemia (DBA), iron overload (IO) is common in transfusion-dependent patients, yet has also been reported in non-transfusion-dependent patients. We explored the incidence of IO in transfusion-dependent and non-transfusion-dependent DBA patients. We observed hepatic IO in 65% of patients analysed with MRI, including three patients that were only treated with transfusions in the past. Whereas overall ferritin levels and liver iron content correlated, ferritin levels did not reflect total body iron adequately. Our data suggest that transfusion burden in the past plays an important role in IO in DBA, and should be taken into account during follow up.
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- 2022
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4. Untargeted metabolic profiling in dried blood spots identifies disease fingerprint for pyruvate kinase deficiency
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Melissa H. Broeks, Nanda M. Verhoeven-Duif, Marije Bartels, Edward E. S. Nieuwenhuis, Judith J.M. Jans, Birgit van Dooijeweert, Wouter W. van Solinge, Eduard J. van Beers, and Richard van Wijk
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Spots ,Metabolite ,Pyruvate Kinase ,Anemia, Hemolytic, Congenital Nonspherocytic ,Hematology ,Computational biology ,Disease ,Pyruvate Metabolism, Inborn Errors ,Diagnostic evaluation ,Biology ,medicine.disease ,Article ,Dried blood spot ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,medicine ,Humans ,Metabolomics ,Glycolysis ,Dried Blood Spot Testing ,Dried blood ,030215 immunology ,Pyruvate kinase deficiency - Abstract
The diagnostic evaluation and clinical characterization of rare hereditary anemia (RHA) is to date still challenging. In particular, there is little knowledge of the broad metabolic impact of many of the molecular defects underlying RHA. In this study we explored the potential of untargeted metabolomics to diagnose a relatively common type of RHA: pyruvate kinase deficiency (PKD). In total, 1,903 unique metabolite features were identified in dried blood spot samples from 16 PKD patients and 32 healthy controls. A metabolic fingerprint was identified using a machine learning algorithm, and subsequently a binary classification model was designed. The model showed high performance characteristics (AUC 0.990, 95% CI: 0.981-0.999) and an accurate class assignment was achieved for all newly added control (n=13) and patient samples, (n=6) with the exception of one patient (accuracy 94%). Important metabolites in the metabolic fingerprint included glycolytic intermediates, polyamines and several acyl carnitines. In general, the application of untargeted metabolomics in dried blood spots is a novel functional tool that holds promise for the diagnostic stratification and studies on the disease pathophysiology in RHA.
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- 2020
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5. GATA-1 Defects in Diamond–Blackfan Anemia: Phenotypic Characterization Points to a Specific Subset of Disease
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Birgit van Dooijeweert, Sima Kheradmand Kia, Niklas Dahl, Odile Fenneteau, Roos Leguit, Edward Nieuwenhuis, Wouter van Solinge, Richard van Wijk, Lydie Da Costa, and Marije Bartels
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Ribosomal Proteins ,dysmegakaryopoiesis ,Hematology ,Iran ,GATA-1 ,Diamond-Blackfan anemia ,dyserythropoiesis ,Phenotype ,DBA-like disease ,Diamond–Blackfan anemia ,Genetics ,Humans ,Erythropoiesis ,GATA1 Transcription Factor ,Hematologi ,Genetics (clinical) ,Anemia, Diamond-Blackfan - Abstract
Diamond–Blackfan anemia (DBA) is one of the inherited bone marrow failure syndromes marked by erythroid hypoplasia. Underlying variants in ribosomal protein (RP) genes account for 80% of cases, thereby classifying DBA as a ribosomopathy. In addition to RP genes, extremely rare variants in non-RP genes, including GATA1, the master transcription factor in erythropoiesis, have been reported in recent years in patients with a DBA-like phenotype. Subsequently, a pivotal role for GATA-1 in DBA pathophysiology was established by studies showing the impaired translation of GATA1 mRNA downstream of the RP haploinsufficiency. Here, we report on a patient from the Dutch DBA registry, in which we found a novel hemizygous variant in GATA1 (c.220+2T>C), and an Iranian patient with a previously reported variant in the initiation codon of GATA1 (c.2T>C). Although clinical features were concordant with DBA, the bone marrow morphology in both patients was not typical for DBA, showing moderate erythropoietic activity with signs of dyserythropoiesis and dysmegakaryopoiesis. This motivated us to re-evaluate the clinical characteristics of previously reported cases, which resulted in the comprehensive characterization of 18 patients with an inherited GATA-1 defect in exon 2 that is presented in this case-series. In addition, we re-investigated the bone marrow aspirate of one of the previously published cases. Altogether, our observations suggest that DBA caused by GATA1 defects is characterized by distinct phenotypic characteristics, including dyserythropoiesis and dysmegakaryopoiesis, and therefore represents a distinct phenotype within the DBA disease spectrum, which might need specific clinical management.
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- 2022
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6. Diamond Blackfan anemia & other hereditary red cell disorders: spotting phenotypes
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Birgit van Dooijeweert, Nieuwenhuis, E.E.S., Solinge, W.W. van, Bartels, M., Wijk, H.A. van, and University Utrecht
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Genetics ,Red Cell ,Diamond Blackfan anemie ,Fenotype-Genotype ,Metabolomics ,Fenotyperen ,dried bloodspots ,machine learning algoritmen ,metabolic fingerprint ,pyruvaat kinase deficiëntie ,hereditaire sferocytose ,erfelijke anemie ,medicine ,Biology ,Diamond–Blackfan anemia ,Spotting ,medicine.disease ,Phenotype - Abstract
Research in this thesis was conducted to contribute to the phenotypic characterization of hereditary anemias, in particular of Diamond-Blackfan anemia (DBA). Phenotyping is at the root of recognizing and understanding disorders by forming the contextual framework whereupon research and care can be commenced. The clinical phenotype that patients endure is the ultimate culmination of the genetic background and pathophysiological processes they evoke, and recognizing the phenotypic spectrum in these rare disorders is crucial for both the diagnostic evaluation as well as long term clinical treatment. In the first and third part of this thesis we focus on DBA, a rare bone marrow failure disorder with a broad range of underlying molecular defects and clinical phenotypes. Since registries have historically proven to be crucial in increasing disease understanding, we established the Dutch DBA Registry (DBAN) and created a comprehensive overview of 43 patients. Further on, we used DBAN to address iron overload, an important and understudied complication in DBA, and show that iron overload occurs often, even in patients wild only mildly elevated ferritin levels. In the second part of this thesis we explored the fairly uncharted omics layer of ‘metabolomics’ in the field of rare hereditary anemias. In the studies that are presented in this part of the thesis, we employed untargeted metabolomics to define disease specific metabolic signatures for the hereditary anemias pyruvate kinase deficiency, DBA and hereditary spherocytosis and show this could serve both future diagnostic potential as well as generate novel insights into the pathophysiology of these disorders.
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- 2021
7. [A toddler with status dystonicus due to medication]
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Birgit, van Dooijeweert, Anna Vera D, Verschuur, Nora A, Visser, and Jurgen, Jansen
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Dystonia ,Dystonic Disorders ,Child, Preschool ,Humans ,Hypnotics and Sedatives ,Infant ,Female - Abstract
Status dystonicus (SD) is a severe episode of generalized dystonia, potentially complicated by respiratory and metabolic disruption. Triggers can be infection, medication, or metabolic disturbance. The prognosis is variable and mortality is approximately 10%.An 18 month old girl presented to the ER with clinical suspicion of a febrile status epilepticus and was evaluated according to APLS principles. Eventually, a SD became apparent, with generalized dystonic features at examination. Most likely, the episode was provoked by a single dose of metoclopramide. Her clinical state improved rapidly, possibly aided by administration of biperiden.Treatment of SD encompasses elimination or treatment of the trigger, stabilization of vital functions, possible administration of sedatives and dystonia specific medication. Metoclopramide holds a relatively high risk for extrapyramidal complications (1-10%) and dystonia (0.1-1.5%), even within therapeutic range. The use of anti-emetics with less alarming side effect profiles, for example ondansetron, is recommended.
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- 2021
8. Dried blood spot metabolomics reveals a metabolic fingerprint with diagnostic potential for Diamond Blackfan Anaemia
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Nanda M. Verhoeven-Duif, Wouter W. van Solinge, Eduard J. van Beers, Marije Bartels, Richard van Wijk, Edward E. S. Nieuwenhuis, Judith J.M. Jans, Melissa H. Broeks, and Birgit van Dooijeweert
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Male ,Adolescent ,Computational biology ,03 medical and health sciences ,0302 clinical medicine ,Metabolomics ,Fingerprint ,Predictive Value of Tests ,Medicine ,Humans ,Dried blood ,Child ,Anemia, Diamond-Blackfan ,Diamond-Blackfan anaemia ,business.industry ,Genetic heterogeneity ,Infant ,Hematology ,Dried blood spot ,Untargeted metabolomics ,030220 oncology & carcinogenesis ,Child, Preschool ,Female ,Dried Blood Spot Testing ,business ,Inherited bone marrow failure syndrome ,030215 immunology - Abstract
The diagnostic evaluation of Diamond Blackfan Anaemia (DBA), an inherited bone marrow failure syndrome characterised by erythroid hypoplasia, is challenging because of a broad phenotypic variability and the lack of functional screening tests. In this study, we explored the potential of untargeted metabolomics to diagnose DBA. In dried blood spot samples from 18 DBA patients and 40 healthy controls, a total of 1752 unique metabolite features were identified. This metabolic fingerprint was incorporated into a machine-learning algorithm, and a binary classification model was constructed using a training set. The model showed high performance characteristics (average accuracy 91·9%), and correct prediction of class was observed for all controls (n = 12) and all but one patient (n = 4/5) from the validation or 'test' set (accuracy 94%). Importantly, in patients with congenital dyserythropoietic anaemia (CDA) - an erythroid disorder with overlapping features - we observed a distinct metabolic profile, indicating the disease specificity of the DBA fingerprint and underlining its diagnostic potential. Furthermore, when exploring phenotypic heterogeneity, DBA treatment subgroups yielded discrete differences in metabolic profiles, which could hold future potential in understanding therapy responses. Our data demonstrate that untargeted metabolomics in dried blood spots is a promising new diagnostic tool for DBA.
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- 2021
9. Molecular approaches to diagnose Diamond-Blackfan anemia: The EuroDBA experience
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Sule Unal, Irma Dianzani, Birgit van Dooijeweert, Lydie Da Costa, Marcin W. Wlodarski, Thierry Leblanc, Marie-Françoise O'Donohue, Hannah Tamary, Ugo Ramenghi, Alyson W. MacInnes, Marije Bartels, Katarzyna Albrecht, Pierre-Emmanuel Gleizes, AP-HP, Service d'Hématologie Biologique, Hôpital Robert-Debré, Laboratoire de biologie moléculaire eucaryote (LBME), Centre National de la Recherche Scientifique (CNRS)-Centre de Biologie Intégrative (CBI), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS), Dept. of Pediatrics, Università degli studi di Torino (UNITO), Jet Propulsion Laboratory (JPL), NASA-California Institute of Technology (CALTECH), Dept. Medical Sciences, Università degli Studi del Piemonte Orientale - Amedeo Avogadro (UPO), Pediatric Hematology Unit (Pediatric Hematology Unit), Schneider Children's Medical Center of Israel, Çocuk Sağlığı ve Hastalıkları, Laboratory Genetic Metabolic Diseases, and AGEM - Amsterdam Gastroenterology Endocrinology Metabolism
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Ribosomal Proteins ,0301 basic medicine ,Pediatrics ,medicine.medical_specialty ,Anemia ,[SDV]Life Sciences [q-bio] ,Pre-rRNA processing ,Bone Marrow Cells ,Biology ,Bioinformatics ,Diamond-Blackfan anemia ,03 medical and health sciences ,Urogenital region ,Ribosomal protein genes ,Genetics ,medicine ,Humans ,Abnormalities, Multiple ,Genetics(clinical) ,In patient ,Diamond–Blackfan anemia ,ComputingMilieux_MISCELLANEOUS ,Genetics (clinical) ,Anemia, Diamond-Blackfan ,Polysome profiling ,Ribosome biogenesis ,Genetics & Heredity ,General Medicine ,medicine.disease ,3. Good health ,030104 developmental biology ,Mutation ,Haploinsufficiency ,Inherited bone marrow failure syndrome ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Rare disease - Abstract
Diamond-Blackfan anemia (DBA) is a rare congenital erythroblastopenia and inherited bone marrow failure syndrome that affects approximately seven individuals in every million live births. In addition to anemia, about 50% of all DBA patients suffer from various physical malformations of the face, hands, heart, or urogenital region. The disorder is almost exclusively driven by haploinsufficient mutations in one of several ribosomal protein (RP) genes, although for similar to 30% of diagnosed patients no mutation is found in any of the known DBA-linked genes. Because DBA is such a rare disease with a particularly wide range of clinical phenotypes and molecular signatures, the development of collaborative efforts such as the ERARE-funded European DBA consortium (EuroDBA) has become imperative for DBA research. EuroDBA was founded in 2012 and brings together dedicated clinical and biological researchers of DBA from France, Italy, the Netherlands, Germany, Israel, Poland, and Turkey to achieve a number of goals including the consolidation of data in patient registries, establishment of minimal diagnostic criteria, and projects aimed at more fully describing the different mutations linked to DBA. This review will cover the history of the EuroDBA registries, the methods used by EuroDBA in the diagnosis of DBA, and how the consortium has successfully worked together towards the discovery of new DBA-linked genes and the better understanding their pathophysiological effects.
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- 2018
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10. Ferritin Levels Do Not Reflect the Severity of Iron Overload in Diamond Blackfan Anemia
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Marije Bartels, Richard van Wijk, Birgit van Dooijeweert, Eduard J. van Beers, Elise J. Huisman, Jonathan de Wilde, Frans J. Smiers, Edward E. S. Nieuwenhuis, and Wouter W. van Solinge
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medicine.medical_specialty ,Endocrinology ,business.industry ,Internal medicine ,Immunology ,Ferritin levels ,medicine ,Cell Biology ,Hematology ,Diamond–Blackfan anemia ,business ,medicine.disease ,Biochemistry - Abstract
Introduction: Diamond Blackfan anemia (DBA) is an inherited bone marrow failure syndrome (IBMFS) characterized by hypoplastic anemia, congenital malformations and an increased risk to develop malignancies.Until now, treatment of DBA consists of red blood cell (RBC) transfusions, glucocorticoids (GC) and allogeneic hematopoietic stem cell transplantation in a selection of patients. Whereas RBC transfusions are the main cause of IO, elevated iron parameters have also been reported in non-transfusion-dependent DBA patients. Here we investigated the incidence and severity of IO in a well-described cohort of transfusion-dependent and non-transfusion-dependent DBA patients in order to gain more insight in the regulation of iron metabolism in DBA, and to provide clinical guiding to improve the diagnosis and management of IO in DBA. Methods: In this retrospective, observational study we have included twenty-nine pediatric and adult DBA patients for whom at least one serum ferritin level and/or MRI result was available. Ten patients (34%) were classified as transfusion-dependent (TD) (ten or more transfusions during the twelve months prior to evaluation). Non-transfusion-dependent (NTD) patients (66%) were treated with either GC, incidental transfusions or received no treatment. Transfusion burden (transfusion history) was assessed via medical records. Serum ferritin levels ≥250 ng/mL in males and ≥150 ng/mL in females were considered to be elevated. Results of MRI were expressed as liver iron content (LIC) and as cardiac T2* in milliseconds (ms). LIC ≥3 mg/g indicates significant hepatic IO, and LIC ≥7 mg/g is associated with clinical morbidity. Cardiac T2* ≤20 ms indicates significant cardiac IO. Results: In 15/29 (52%) MRI analysis of IO was performed. Hepatic IO (LIC >3 mg/g) was present in 9/29 (31%) of DBA patients, of which 8/9 (89%) had moderate to severe IO (LIC>7mg/g), despite the fact that all but one were treated with chelation therapy. Overall serum ferritin levels and LIC correlated significantly (r=0.7907, p1000 ng/mL (Figure 1A). Interestingly, in the NTD group, hepatic IO was present in 2/7 patients (29%), who both only had mildly elevated serum ferritin levels (263 ng/mL and 277 ng/mL) and were not treated with iron chelation therapy. Based on total transfusion burden since birth, patients were classified in distinct groups: nine patients who received ³10 transfusions during life (9/10) were diagnosed with hepatic IO, whilst none of the patients who received Discussion: We demonstrate that IO is common in DBA yet can be easily overlooked in NTD patients that were treated with transfusions in the past. While serum ferritin levels significantly correlated with LIC values, this parameter cannot be used exclusively to screen for IO or titrate iron chelation therapy. We conclude that in clinical practice, biochemical parameters in combination with transfusion history justify a low-threshold to perform an MRI-based evaluation of IO, and to start adequate chelation therapy. Figure 1 Figure 1. Disclosures Van Beers: Agios Pharmaceuticals: Membership on an entity's Board of Directors or advisory committees, Research Funding; Pfizer: Research Funding; Novartis: Research Funding; RR Mechatronics: Research Funding. Wijk: Global Blood Therapeutics: Membership on an entity's Board of Directors or advisory committees, Research Funding; Axcella health: Research Funding; Agios Pharmaceuticals: Membership on an entity's Board of Directors or advisory committees, Research Funding.
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- 2021
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11. Pediatric Diamond-Blackfan anemia in the Netherlands: An overview of clinical characteristics and underlying molecular defects
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Alyson W. MacInnes, Rienk Y. J. Tamminga, Birgit van Dooijeweert, Hans J. J. P. Gille, D. Maroeska M. W. te Loo, Bernd Granzen, Marc Bierings, Marije Bartels, C. Heleen van Ommen, Albertine E. Donker, Marjolein Peters, Frans J. Smiers, Other departments, Amsterdam Cardiovascular Sciences, Paediatric Infectious Diseases / Rheumatology / Immunology, Laboratory Genetic Metabolic Diseases, Amsterdam Gastroenterology Endocrinology Metabolism, ACS - Pulmonary hypertension & thrombosis, Kindergeneeskunde, MUMC+: MA Medische Staf Kindergeneeskunde (9), RS: FHML non-thematic output, Pediatric surgery, and Human genetics
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Male ,Genotype-phenotype correlation ,Pediatrics ,medicine.medical_treatment ,RPL11 GENES ,Hematopoietic stem cell transplantation ,ribosomopathy ,Diamond-Blackfan anemia ,patient registry ,0302 clinical medicine ,RIBOSOMOPATHIES ,Medicine ,Registries ,Diamond–Blackfan anemia ,Child ,MARROW FAILURE SYNDROMES ,Anemia, Diamond-Blackfan ,Netherlands ,education.field_of_study ,medicine.diagnostic_test ,Hypoplastic anemia ,Hematology ,General Medicine ,Combined Modality Therapy ,RIBOSOMAL-PROTEIN L5 ,Phenotype ,Child, Preschool ,030220 oncology & carcinogenesis ,Patient registry ,Female ,medicine.medical_specialty ,Adolescent ,Genotype ,Anemia ,Population ,Ribosomopathy ,Rare cancers Radboud Institute for Molecular Life Sciences [Radboudumc 9] ,genotype-phenotype correlation ,Polymorphism, Single Nucleotide ,Congenital Abnormalities ,Ribosomal protein L5 ,03 medical and health sciences ,All institutes and research themes of the Radboud University Medical Center ,Journal Article ,Humans ,Genetic Testing ,education ,Genetic Association Studies ,Genetic testing ,IDENTIFICATION ,MUTATIONS ,business.industry ,Genetic heterogeneity ,Infant, Newborn ,Genetic Variation ,Infant ,STEM-CELL TRANSPLANTATION ,IN-VITRO ,medicine.disease ,Bone marrow failure ,REGISTRY ,bone marrow failure ,ERYTHROPOIESIS ,business ,Follow-Up Studies ,030215 immunology - Abstract
INTRODUCTION: Diamond-Blackfan anemia (DBA) is characterized by hypoplastic anemia, congenital anomalies, and a predisposition for malignancies. Most of our understanding of this disorder stems from molecular studies combined with extensive data input from international patient registries.OBJECTIVES: To create an overview of the pediatric DBA population in the Netherlands.METHODS: Forty-three patients diagnosed with DBA from all Dutch university pediatric hospitals were included in this study and their clinical and genetic characteristics were collected from patient records.RESULTS: Congenital malformations were present in 24/43 patients (55.8%). An underlying genetic defect was identified in 26/43 patients (60.5%), the majority of which were found in the RPS19 gene (12/43, 27.9%) with one patient carrying a mutation in a novel DBA candidate gene, RPL9. In 31/35 (88.6%) patients an initial response to glucocorticoid treatment was observed. Six patients (14.0%) underwent hematopoietic stem cell transplantation, and eleven patients (11/43, 25.6%) became treatment-independent spontaneously.CONCLUSION: In agreement with previous reports, the Dutch pediatric DBA population is both clinically and genetically heterogeneous. National and international registries, together with more extensive genetic testing are crucial in order to increase our understanding of genotype and phenotype correlations of this intriguing disorder. This article is protected by copyright. All rights reserved.
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- 2017
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12. Untargeted Metabolomic Fingerprinting As a Potential Tool in the Diagnostic Evaluation of Diamond Blackfan Anemia
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Edward E. S. Nieuwenhuis, Richard van Wijk, Simon T. Grootendorst, Birgit van Dooijeweert, Judith J.M. Jans, Nanda M. Verhoeven, Marije Bartels, Wouter W. van Solinge, and Melissa H. Broeks
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business.industry ,Ribosomopathy ,Metabolite ,Immunology ,Cell Biology ,Hematology ,Macrocytosis ,Computational biology ,Disease ,Gene mutation ,medicine.disease ,Biochemistry ,chemistry.chemical_compound ,Metabolomics ,chemistry ,Medicine ,Reticulocytopenia ,Diamond–Blackfan anemia ,business - Abstract
Background: Diamond-Blackfan anemia (DBA) is a rare inherited bone marrow failure syndrome (IBMFS) marked by erythroid hypoplasia, reticulocytopenia and macrocytosis, and associated with congenital malformations and an increased risk of developing malignancies. From a clinical and molecular perspective this disease is highly heterogeneous, and no clear genotype-phenotype correlations can be found. Since the majority of molecular defects have been found in ribosomal protein (RP) genes, DBA is regarded a "ribosomopathy". While the molecular basis has been studied intensively, the pathophysiology of DBA is still not fully understood. One of the major unresolved issues is how RP gene mutations result in the specific erythroid defect seen in DBA, with macrocytic erythrocytes and increased adenosine deaminase activity. In addition, the highly heterogeneous and variable clinical presentation and disease course, even in patients with similar molecular defects, remains enigmatic. Hence, in order to investigate the cellular defect, and increase our understanding of disease pathophysiology and clinical heterogeneity, novel tools are needed. In this study, we explore the potential of untargeted metabolomics on dried blood spots and report for the first time a metabolic fingerprint for DBA. Aims: Defining a metabolic signature for DBA in order to: 1. Increase our understanding of cellular determinants of impaired ribosome biogenesis, and 2. Extend the toolbox for diagnostic evaluation. Methods: Untargeted metabolic profiling was performed on DBS samples obtained from 18 DBA patients and 45 healthy controls using direct infusion high resolution mass spectrometry following a previously established approach1. Statistical analysis was performed in MetaboAnalyst and predictive modeling was executed within R-software. Results: In total, 1917 unique metabolite features were identified in DBS samples from patients and controls. Multivariate analysis yielded distinct metabolic profiles, reflected by natural separation detected by principal component analysis (Figure 1A), and emphasized by clear distinction with partial least square discriminant analysis (Figure 1B). This 'metabolic fingerprint' was incorporated into a machine learning algorithm, and subsequently a binary classification (or prediction) model was constructed by randomly dividing patient and controls into 'training' (32 HC, 13 DBA) or 'test' set (13 HC, 5 DBA). Accurate class assignment was achieved for all patients and controls in the training set (Figure 1C). Prominent metabolites in the fingerprint and classification algorithm were a.o. menadione (a vitamin K precursor), 4-hydroxyproline (collagen component) and methylmalonylcarnitine (an acylcarnitine). In addition a large number of interesting metabolites were identified that could provide novel starting points for studying/understanding downstream effects of RP defects in DBA and therapeutic mechanisms (Figure 1D). Conclusion: In this study we performed untargeted metabolomics on dried blood spots from a substantial cohort of DBA patients and report for the first time a metabolic fingerprint of this disease. By incorporating this fingerprint in a machine learning algorithm we underlined the diagnostic potential of this approach. Moreover, the metabolites identified in this fingerprint, provide promising starting points for further studies to increase our insights in disease pathophysiology, including the mechanism involved in elevated eADA activity, as well as the development of new therapeutic strategies. References: 1. de Sain-van der Velden MGM, van der Ham M, Gerrits J, et al. Quantification of metabolites in dried blood spots by direct infusion high resolution mass spectrometry. Anal Chim Acta. 2017;979:45-50. Disclosures Wijk: Agios Pharmaceuticals Inc.: Research Funding; RR mechatronics: Research Funding.
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- 2020
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13. The Interplay between Drivers of Erythropoiesis and Iron Homeostasis in Rare Hereditary Anemias: Tipping the Balance
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Birgit van Dooijeweert, Simon T. Grootendorst, Jonathan de Wilde, Richard van Wijk, Roger E. G. Schutgens, Wouter W. van Solinge, Marije Bartels, and Annelies J. Van Vuren
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Ineffective erythropoiesis ,medicine.medical_specialty ,Iron ,Review ,medicine.disease_cause ,Catalysis ,lcsh:Chemistry ,Inorganic Chemistry ,03 medical and health sciences ,0302 clinical medicine ,Iron homeostasis ,Internal medicine ,medicine ,Homeostasis ,Humans ,iron metabolism ,In patient ,iron overload ,Physical and Theoretical Chemistry ,lcsh:QH301-705.5 ,Molecular Biology ,Spectroscopy ,ineffective erythropoiesis ,business.industry ,Organic Chemistry ,Anemia ,General Medicine ,medicine.disease ,Hemolysis ,Computer Science Applications ,Endocrinology ,lcsh:Biology (General) ,lcsh:QD1-999 ,030220 oncology & carcinogenesis ,Transfusion dependence ,Erythropoiesis ,business ,Chronic anemia ,erythropoiesis ,030215 immunology - Abstract
Rare hereditary anemias (RHA) represent a group of disorders characterized by either impaired production of erythrocytes or decreased survival (i.e., hemolysis). In RHA, the regulation of iron metabolism and erythropoiesis is often disturbed, leading to iron overload or worsening of chronic anemia due to unavailability of iron for erythropoiesis. Whereas iron overload generally is a well-recognized complication in patients requiring regular blood transfusions, it is also a significant problem in a large proportion of patients with RHA that are not transfusion dependent. This indicates that RHA share disease-specific defects in erythroid development that are linked to intrinsic defects in iron metabolism. In this review, we discuss the key regulators involved in the interplay between iron and erythropoiesis and their importance in the spectrum of RHA.
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- 2021
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14. Untargeted Metabolomics on Dried Blood Spots for the Diagnosis and Clinical Follow up of Rare Hereditary Anemias
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Eduard J. van Beers, Melissa H. Broeks, Birgit van Dooijeweert, Marije Bartels, Judith J.M. Jans, Richard van Wijk, and Nanda M. Verhoeven
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Hemolytic anemia ,Pathology ,medicine.medical_specialty ,Enzyme deficiency ,medicine.diagnostic_test ,business.industry ,Anemia ,Immunology ,Cell Biology ,Hematology ,Hematocrit ,medicine.disease ,Biochemistry ,Erythrocyte membrane ,Untargeted metabolomics ,Reticulocyte count ,Medicine ,business ,Dried blood - Abstract
Background: The group of rare hereditary anemias includes a large variety of intrinsic defects of the red blood cell, as well as erythropoiesis. They include hemolytic anemias (e.g. enzyme deficiencies), hemoglobinopathies, hypoplastic anemias (e.g. Diamond-Blackfan Anemia, DBA), and dyserythropoietic anemias. As a result of the rapid developments in genetic testing and the subsequent increased knowledge of molecular defects underlying hereditary anemias, our understanding of the pathophysiology of rare anemias has increased during the last decade. However, in a substantial number of patients, the clinical phenotype does not fit classical criteria of a disease, response to therapy is less than expected, or a molecular defect cannot be found. In addition, in patients with well-described molecular defects, there is often no clear genotype-phenotype correlation. In order to better understand the underlying pathophysiological mechanisms driving ineffective erythropoiesis in patients and to improve their classification and clinical evaluation, novel functional tests are needed. Metabolomics is the large-scale, unbiased study of metabolites and their interactions within a biological system, directly reflecting the underlying biochemical activity and state of cells. Metabolomics can be used to identify novel disease biomarkers, study deregulated cellular pathways, and to determine the cellular responses to therapeutic interventions. In this study we demonstrate that dried blood spots (DBS) can be used as a minimal invasive and validated technical approach to perform large scale metabolomics in a variety of rare hereditary anemias. Methods: DBS samples from >100 patients suffering from a variety of rare anemiaswere collected during regular hospital visits. Quantification of metabolites was performed by direct infusion high resolution mass spectrometry (DI-HRMS) followed by an untargetedmetabolomics pipeline. For annotation, the Human Metabolome Database (HMDB) was used. Results were compared with DBS samples of 70 healthy adult controls and 35 pediatric patients negatively screened for metabolic diseases Results: For each patient sample, Z-scores were calculated for all mass peaks annotated with metabolites (HMDB, 3930). Mass peak, intensity and corresponding Z-scores were compared with two distinct groups of controls (∆Z-scores): pediatric patients who were screened for metabolic diseases but were found negative, and healthy adult controls. For data interpretation, two strategies were used. First, by untargeted statistical analysis in Metabo-analyst, we identified metabolites (and/or isomers) that showed either increased or decreased intensity. For the second strategy we specifically focused on red blood cell metabolic pathways, including glycolysis, the pentose phosphate pathway, ascorbate and glutathione metabolism, arginine and polyamine metabolism, and erythrocyte membrane turnover and transport. We corrected for a potential hematocrit effect and performed subgroup analyses correcting for reticulocyte counts. Our preliminary data indicate potential biomarkers for distinct disease entities, including altered polyamine metabolism (DBA, SCD), glycolysis (DBA, HS), and aberrant arginine metabolism (SCD) (Figure 1). Further in-depth pathway analyses, and targeted validation of biomarker profiles are currently being performed. Conclusion: Untargeted metabolomics using dried blood spots provides a novel functional tool to identify disease biomarkers and common and distinct deregulated cellular pathways. This will improve diagnostic evaluation and clinical management of patients with rare hereditary anemias, contribute to a better understanding of disease pathophysiology, and aid in the development of therapeutic strategies. Disclosures van Beers: Agios Pharmaceuticals, Inc.: Membership on an entity's Board of Directors or advisory committees, Research Funding; Novartis: Consultancy, Research Funding; Pfizer: Research Funding; RR Mechatronics: Research Funding. van Wijk:RR Mechatronics: Research Funding; Agios Pharmaceuticals: Consultancy, Research Funding.
- Published
- 2019
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15. [A toddler with status dystonicus due to medication].
- Author
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van Dooijeweert B, Verschuur AVD, Visser NA, and Jansen J
- Subjects
- Child, Preschool, Female, Humans, Hypnotics and Sedatives, Infant, Dystonia chemically induced, Dystonia diagnosis, Dystonia drug therapy, Dystonic Disorders
- Abstract
Background: Status dystonicus (SD) is a severe episode of generalized dystonia, potentially complicated by respiratory and metabolic disruption. Triggers can be infection, medication, or metabolic disturbance. The prognosis is variable and mortality is approximately 10%., Case Description: An 18 month old girl presented to the ER with clinical suspicion of a febrile status epilepticus and was evaluated according to APLS principles. Eventually, a SD became apparent, with generalized dystonic features at examination. Most likely, the episode was provoked by a single dose of metoclopramide. Her clinical state improved rapidly, possibly aided by administration of biperiden., Conclusion: Treatment of SD encompasses elimination or treatment of the trigger, stabilization of vital functions, possible administration of sedatives and dystonia specific medication. Metoclopramide holds a relatively high risk for extrapyramidal complications (1-10%) and dystonia (0.1-1.5%), even within therapeutic range. The use of anti-emetics with less alarming side effect profiles, for example ondansetron, is recommended.
- Published
- 2021
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