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The fish biodiversity in the Congo River and its tributaries is extremely rich but the information on fish communities in the headwaters in terms of catch and biomass estimates is rare. Fishes in the running and stagnant waters in this region are of vital importance as a food resource for local residents. This study aimed to describe the fish community, catch, and biomass in the three headwater streams Bambou, Lebomo, and Bongo in the Lake Tumba Landscape (LTL) of the Democratic Republic of the Congo. Such information is of vital importance as a benchmark to understand the sustainability of the fish population for future generations of residents of the LTL. The field data were collected from 2007 through 2011, including dry and wet seasons. Here we present the results of this systematic, multi-annual study which was the first for fishes in streams of this region. In total, 50 species of 15 families were found in the nutrient-poor brown waters of these streams where high concentrations of humic acids cause a low pH. Among abundant species occurring in all three streams were the cyprinid Enteromius holotaenia (Boulenger, 1904), the mormyrid Marcusenius moorii (Günther, 1867), the alestids Clupeocharax schoutedeni Pellegrin, 1926 and Bryconaethiops boulengeri Pellegrin, 1900, and the clariid Clarias angolensis Steindachner, 1866. Bongo Stream was distinguished from the others by a rich abundance of Alestopetersius compressus (Poll et Gosse, 1963). The presence of several species at low pH (between 5.0 and 5.5) is new information that lowers the bottom of the pH interval for these species compared to earlier reports. The maximum total length (TL) of some other species was by 5–20 percentage points higher than those reported earlier. The median weight per unit effort (WPUE) in the streams varied between 30 and 115 g per hour during the dry seasons and between 18 and 86 g per hour during the wet seasons. The fish biomass in the streams varied between 0.05 and 0.7 g ⸱ m–2 with a median 0.14 g ⸱ m–2. This relatively low value compared to other tropical headwaters may be a result of the low pH and dark color of these headwaters. The results of the study serve as a reference point to which future monitoring of fish fauna can be compared for sustainable management of the LTL.

The description and differentiation of habitat types is a major concern in ecology. This study examined relationships between Bonobo Pan paniscus nesting patterns and forest structure in the Lake Tumba Swampy Forests. Data on presence of fresh Bonobo nests, canopy cover, canopy structure, tree densities and tree basal areas were collected systematically along 134 transects at 400m and 800m intervals, and the leaf-covered area (LCA) was calculated for each of seven forest types. I observed a significant correlation between bonobo nests and mixed mature forest/closed understory forest type (r=-0.730, df = 21, p

Like most emerging infectious disease viruses, HIV is also of zoonotic origin. To assess the risk for cross-species transmission of simian immunodeficiency viruses (SIVs) from nonhuman primates to humans in the Democratic Republic of Congo, we collected 330 samples derived from nonhuman primate bushmeat at 3 remote forest sites. SIV prevalences were estimated by using a novel high-throughput assay that included 34 HIV and SIV antigens in a single well. Overall, 19% of nonhuman primate bushmeat was infected with SIVs, and new SIV lineages were identified. Highest SIV prevalences were seen in red-tailed guenons (25%) and Tshuapa red colobus monkeys (24%), representing the most common hunted primate species, thus increasing the likelihood for cross-species transmission. Additional studies are needed to determine whether other SIVs crossed the species barrier. With the newly developed assay, large-scale screening against many antigens is now easier and faster.

Les grands singes d’Afrique sont les réservoirs du VIH et HTLV responsables d’épidémies et de pandémies. Cependant, chez les bonobos, un grand singe endémique de la RDC, peu de données sont disponibles sur les infections rétrovirales. Cette étude vise à caractériser les rétrovirus simiens de bonobos sauvages en RDC, pays où l'épidémie de VIH a commencé.Entre 2010 et 2012, des échantillons de matières fécales de bonobos (P. paniscus) sauvages ont été recueillis sur du RNAlater® dans les différentes forêts de la RDC. La confirmation des espèces a été faite par l’analyse de l’ADN mitochondrial. La recherche des anticorps anti-SIV/VIH a été réalisée en utilisant le test INNO-LIA VIH. L’infection SIV a été confirmée par PCR et séquençage d'un fragment du gène pol (400bp) pour SIV. L'infection STLV a été recherchée en utilisant des amorces spécifiques universelles du gène tax (200pb) ainsi que des LTR (450bp), suivis par les analyses phylogénétiques des séquences obtenues en utilisant la méthode de maximum de vraisemblance. Un total de 633 échantillons de selles a été prélevé et l’analyse de l’ADN mitochondrial a confirmé que tous les échantillons provenaient de bonobos. Huit (1,2 %) des 633 échantillons ont donné une amplification positive du fragment de tax de STLV. Parmi eux, six échantillons ont été identifiés comme STLV-2 et deux comme STLV-3 par l'analyse phylogénétique. Les analyses phylogénétiques de tax de LTR ont montré que le nouveau STLV-2 à partir de bonobos sauvages se regroupe avec les souches STLV-2 décrites précédemment chez les bonobos en captivité. Les STLV-3 identifiés chez les bonobos dans cette étude se regroupaient avec STLV-3 de petits singes vivant dans la même région. Par ailleurs, tous les échantillons fécaux ont été négatifs pour les anticorps croisés SIV/VIH. Notre étude a confirmé pour la première fois l’infection STLV-2 et 3 chez les bonobos sauvages en RDC et a montré que les bonobos, contrairement aux autres grands singes d’Afrique, ne semblent pas être infectés par le SIV, l’ancêtre du VIH.

African forest elephants- taxonomically and functionally unique-are being poached at accelerating rates, but we lack range-wide information on the repercussions. Analysis of the largest survey dataset ever assembled for forest elephants (80 foot-surveys; covering 13,000 km; 91,600 person-days of fieldwork) revealed that population size declined by ca. 62% between 2002-2011, and the taxon lost 30% of its geographical range. The population is now less than 10% of its potential size, occupying less than 25% of its potential range. High human population density, hunting intensity, absence of law enforcement, poor governance, and proximity to expanding infrastructure are the strongest predictors of decline. To save the remaining African forest elephants, illegal poaching for ivory and encroachment into core elephant habitat must be stopped. In addition, the international demand for ivory, which fuels illegal trade, must be dramatically reduced.

Rickettsia felis is a common emerging pathogen detected in mosquitoes in sub-Saharan Africa. We hypothesized that, as with malaria, great apes may be exposed to the infectious bite of infected mosquitoes and release R. felis DNA in their feces.We conducted a study of 17 forest sites in Central Africa, testing 1,028 fecal samples from 313 chimpanzees, 430 gorillas and 285 bonobos. The presence of rickettsial DNA was investigated by specific quantitative real-time PCR. Positive results were confirmed by a second PCR using primers and a probe targeting a specific gene for R. felis. All positive samples were sequenced.Overall, 113 samples (11%) were positive for the Rickettsia-specific gltA gene, including 25 (22%) that were positive for R. felis. The citrate synthase (gltA) sequence and outer membrane protein A (ompA) sequence analysis indicated 99% identity at the nucleotide level to R. felis. The 88 other samples (78%) were negative using R. felis-specific qPCR and were compatible with R. felis-like organisms.For the first time, we detected R. felis in wild-living ape feces. This non invasive detection of human pathogens in endangered species opens up new possibilities in the molecular epidemiology and evolutionary analysis of infectious diseases, beside HIV and malaria.

This study examined how outbreaks and the occurrence of Anthrax, Ebola, Monkeypox and Trypanosomiasis may differentially affect the distribution of bonobos (Pan paniscus). Using a combination of mapping, Jaccard overlapping coefficients and binary regressions, the study determined how each disease correlated with the extent of occurrence of, and the areas occupied by, bonobos. Anthrax has only been reported to occur outside the range of bonobos and so was not considered further. Ebola, Monkeypox and Trypanosomiasis were each reported within the area of occupancy of bonobos. Their respective overlap coefficients were: J = 0.10; Q(α = 0.05) = 2.00 (odds ratios = 0.0001, 95% CI = 0.0057; Z = -19.41, significant) for Ebola; J = 1.00; Q(α = 0.05) = 24.0 (odds ratios = 1.504, 95% CI = 0.5066-2.6122) for Monkeypox; and, J = 0.33; Q(α = 0.05) = 11.5 (Z = 1.14, significant) for Trypanosomiasis. There were significant relationships for the presence and absence of Monkeypox and Trypanosomiasis and the known extent of occurrence of bonobos, based on the equations y = 0.2368Ln(x)+0.8006 (R(2) = 0.9772) and y = -0.2942Ln(x)+0.7155 (R(2) = 0.698), respectively. The positive relationship suggested that bonobos tolerated the presence of Monkeypox. In contrast, the significant negative coefficient suggested that bonobos were absent in areas where Trypanosomiasis is endemic. Our results suggest that large rivers may have prevented Ebola from spreading into the range of bonobos. Meanwhile, Trypanosomiasis has been recorded among humans within the area of occurrence of bonobos, and appears the most important disease in shaping the area of occupancy of bonobos within their overall extent of occupancy.

The rapid disruption of tropical forests probably imperils global biodiversity more than any other contemporary phenomenon. With deforestation advancing quickly, protected areas are increasingly becoming final refuges for threatened species and natural ecosystem processes. However, many protected areas in the tropics are themselves vulnerable to human encroachment and other environmental stresses. As pressures mount, it is vital to know whether existing reserves can sustain their biodiversity. A critical constraint in addressing this question has been that data describing a broad array of biodiversity groups have been unavailable for a sufficiently large and representative sample of reserves. Here we present a uniquely comprehensive data set on changes over the past 20 to 30 years in 31 functional groups of species and 21 potential drivers of environmental change, for 60 protected areas stratified across the world’s major tropical regions. Our analysis reveals great variation in reserve ‘health’: about half of all reserves have been effective or performed passably, but the rest are experiencing an erosion of biodiversity that is often alarmingly widespread taxonomically and functionally. Habitat disruption, hunting and forest-product exploitation were the strongest predictors of declining reserve health. Crucially, environmental changes immediately outside reserves seemed nearly as important as those inside in determining their ecological fate, with changes inside reserves strongly mirroring those occurring around them. These findings suggest that tropical protected areas are often intimately linked ecologically to their surrounding habitats, and that a failure to stem broad-scale loss and degradation of such habitats could sharply increase the likelihood of serious biodiversity declines.

Debate over repealing the ivory trade ban dominates conferences of the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES). Resolving this controversy requires accurate estimates of elephant population trends and rates of illegal killing. Most African savannah elephant populations are well known; however, the status of forest elephants, perhaps a distinct species, in the vast Congo Basin is unclear. We assessed population status and incidence of poaching from line-transect and reconnaissance surveys conducted on foot in sites throughout the Congo Basin. Results indicate that the abundance and range of forest elephants are threatened from poaching that is most intense close to roads. The probability of elephant presence increased with distance to roads, whereas that of human signs declined. At all distances from roads, the probability of elephant occurrence was always higher inside, compared to outside, protected areas, whereas that of humans was always lower. Inside protected areas, forest elephant density was correlated with the size of remote forest core, but not with size of protected area. Forest elephants must be prioritised in elephant management planning at the continental scale.