15 results on '"Bigalke, Arite"'
Search Results
2. A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions
- Author
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Dittami, Simon, Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Ashwin, Eveillard, Damien, Gachon, Claire, Griffiths, Sarah, Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François, Medina, Mónica, Marzinelli, Ezequiel, Morganti, Teresa, Pons, Laura, Prado, Soizic, Valverde, José Pintado, Saha, Mahasweta, Selosse, Marc-Andre, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Subjects
Quantitative Biology - Populations and Evolution - Abstract
Host-microbe interactions play crucial roles in marine ecosystems, but we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a long-lasting relationship, form the holobiont, and have to be studied together, as a coherent biological and functional unit, in order to understand the biology, ecology and evolution of the organisms. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences with comparisons to terrestrial science whenever appropriate. A deeper understanding of such complex systems, however, will require further technological and conceptual advances. The most significant challenge will be to bridge functional research on simple and tractable model systems and global approaches. This will require scientists to work together as an (inter)active community in order to address, for instance, ecological and evolutionary questions and the roles of holobionts in biogeochemical cycles., Comment: PeerJ Preprints, Computer Science Preprints., 2019
- Published
- 2019
- Full Text
- View/download PDF
3. Multiplex quantification of C-terminal alpha-1-antitrypsin peptides provides a novel approach for characterizing systemic inflammation
- Author
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Bigalke, Arite, Sponholz, Christoph, Schnabel, Claudia, Bauer, Michael, and Kiehntopf, Michael
- Published
- 2022
- Full Text
- View/download PDF
4. Fragments of alpha-1-antitrypsin in patients with severe COVID-19 and bacterial pulmonary sepsis
- Author
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Bigalke, Arite, primary, Neu, Charles, additional, Esper Treml, Ricardo, additional, Coldewey, Sina M., additional, and Kiehntopf, Michael, additional
- Published
- 2022
- Full Text
- View/download PDF
5. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
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Dittami, Simon M, Arboleda, Enrique, Auguet, Jean-christophe, Bigalke, Arite, Briand, Enora, Cardenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin, Eveillard, Damien, Gachon, Claire Mm, Griffiths, Sarah, Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H, Media, Monica, Marzinelli, Ezequiel M, Morganti, Teresa, Nunez Pons, Laura, Prado, Soizik, Pintado, José, Saha, Mahasweta, Selosse, Marc-andré, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, Not, Fabrice, Dittami, Simon M, Arboleda, Enrique, Auguet, Jean-christophe, Bigalke, Arite, Briand, Enora, Cardenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin, Eveillard, Damien, Gachon, Claire Mm, Griffiths, Sarah, Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H, Media, Monica, Marzinelli, Ezequiel M, Morganti, Teresa, Nunez Pons, Laura, Prado, Soizik, Pintado, José, Saha, Mahasweta, Selosse, Marc-andré, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Abstract
Host-microbe interactions play crucial roles in marine ecosystems, but we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a long-lasting relationship, form the holobiont, and have to be studied together, as a coherent biological and functional unit, in order to understand the biology, ecology and evolution of the organisms. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences with comparisons to terrestrial science whenever appropriate. A deeper understanding of such complex systems, however, will require further technological and conceptual advances. The most significant challenge will be to bridge functional research on simple and tractable model systems and global approaches. This will require scientists to work together as an (inter)active community in order to address, for instance, ecological and evolutionary questions and the roles of holobionts in biogeochemical cycles.
- Published
- 2021
- Full Text
- View/download PDF
6. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
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Dittami, Simon M., Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin H., Eveillard, Damien, Gachon, Claire M.M., Griffiths, Sarah M., Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H., Medina, Mónica, Marzinelli, Ezequiel M., Morganti, Teresa Maria, Núñez Pons, Laura, Prado, Soizic, Pintado, José, Saha, Mahasweta, Selosse, Marc-André, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, Not, Fabrice, Dittami, Simon M., Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin H., Eveillard, Damien, Gachon, Claire M.M., Griffiths, Sarah M., Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H., Medina, Mónica, Marzinelli, Ezequiel M., Morganti, Teresa Maria, Núñez Pons, Laura, Prado, Soizic, Pintado, José, Saha, Mahasweta, Selosse, Marc-André, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Abstract
Host-microbe interactions play crucial roles in marine ecosystems. However, we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help to describe and understand these complex systems. It posits that a host and its associated microbiota with which it interacts, form a holobiont, and have to be studied together as a coherent biological and functional unit to understand its biology, ecology, and evolution. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences. Given the connectivity and the unexplored biodiversity specific to marine ecosystems, a deeper understanding of such complex systems requires further technological and conceptual advances, e.g., the development of controlled experimental model systems for holobionts from all major lineages and the modeling of (info)chemical-mediated interactions between organisms. Here we propose that one significant challenge is to bridge cross-disciplinary research on tractable model systems in order to address key ecological and evolutionary questions. This first step is crucial to decipher the main drivers of the dynamics and evolution of holobionts and to account for the holobiont concept in applied areas, such as the conservation, management, and exploitation of marine ecosystems and resources, where practical solutions to predict and mitigate the impact of human activities are more important than ever.
- Published
- 2021
7. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
-
Dittami, Simon M., primary, Arboleda, Enrique, additional, Auguet, Jean-Christophe, additional, Bigalke, Arite, additional, Briand, Enora, additional, Cárdenas, Paco, additional, Cardini, Ulisse, additional, Decelle, Johan, additional, Engelen, Aschwin H., additional, Eveillard, Damien, additional, Gachon, Claire M.M., additional, Griffiths, Sarah M., additional, Harder, Tilmann, additional, Kayal, Ehsan, additional, Kazamia, Elena, additional, Lallier, François H., additional, Medina, Mónica, additional, Marzinelli, Ezequiel M., additional, Morganti, Teresa Maria, additional, Núñez Pons, Laura, additional, Prado, Soizic, additional, Pintado, José, additional, Saha, Mahasweta, additional, Selosse, Marc-André, additional, Skillings, Derek, additional, Stock, Willem, additional, Sunagawa, Shinichi, additional, Toulza, Eve, additional, Vorobev, Alexey, additional, Leblanc, Catherine, additional, and Not, Fabrice, additional
- Published
- 2021
- Full Text
- View/download PDF
8. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
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Dittami, Simon M, primary, Arboleda, Enrique, additional, Auguet, Jean-Christophe, additional, Bigalke, Arite, additional, Briand, Enora, additional, Cardenas, Paco, additional, Cardini, Ulisse, additional, Decelle, Johan, additional, Engelen, Aschwin H, additional, Eveillard, Damien, additional, Gachon, Claire M.M., additional, Griffiths, Sarah M, additional, Harder, Tilmann, additional, Kayal, Ehsan, additional, Kazamia, Elena, additional, Lallier, François H, additional, Medina, Mónica, additional, Marzinelli, Ezequiel, additional, Morganti, Teresa, additional, Núñez Pons, Laura, additional, Prado, Soizic, additional, Pintado, José, additional, Saha, Mahasweta, additional, Selosse, Marc-André, additional, Skillings, Derek, additional, Stock, Willem, additional, Sunagawa, Shinichi, additional, Toulza, Eve, additional, Vorobev, Alexey, additional, Leblanc, Catherine, additional, and Not, Fabrice, additional
- Published
- 2019
- Full Text
- View/download PDF
9. The Algicidal Bacterium Kordia algicida Shapes a Natural Plankton Community
- Author
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Bigalke, Arite, primary, Meyer, Nils, additional, Papanikolopoulou, Lydia Alkistis, additional, Wiltshire, Karen Helen, additional, and Pohnert, Georg, additional
- Published
- 2019
- Full Text
- View/download PDF
10. Algicidal bacteria trigger contrasting responses in model diatom communities of different composition
- Author
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Bigalke, Arite, primary and Pohnert, Georg, additional
- Published
- 2019
- Full Text
- View/download PDF
11. A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions
- Author
-
Dittami, Simon M, primary, Arboleda, Enrique, additional, Auguet, Jean-Christophe, additional, Bigalke, Arite, additional, Briand, Enora, additional, Cárdenas, Paco, additional, Cardini, Ulisse, additional, Decelle, Johan, additional, Engelen, Aschwin, additional, Eveillard, Damien, additional, Gachon, Claire M.M., additional, Griffiths, Sarah, additional, Harder, Tilmann, additional, Kayal, Ehsan, additional, Kazamia, Elena, additional, Lallier, François H, additional, Media, Mónica, additional, Marzinelli, Ezequiel M., additional, Morganti, Teresa, additional, Núñez Pons, Laura, additional, Prado, Soizic, additional, Pintado, José, additional, Saha, Mahasweta, additional, Selosse, Marc-André, additional, Skillings, Derek, additional, Stock, Willem, additional, Sunagawa, Shinichi, additional, Toulza, Eve, additional, Vorobev, Alexey, additional, Leblanc, Catherine, additional, and Not, Fabrice, additional
- Published
- 2019
- Full Text
- View/download PDF
12. Strategies and ecological roles of algicidal bacteria
- Author
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Meyer, Nils, primary, Bigalke, Arite, additional, Kaulfuß, Anett, additional, and Pohnert, Georg, additional
- Published
- 2017
- Full Text
- View/download PDF
13. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
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Dittami, Simon M., Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin, Eveillard, Damien, Gachon, Claire M.M., Griffiths, Sarah, Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H., Medina, Mónica, Marzinelli, Ezequiel M., Morganti, Teresa, Núñez Pons, Laura, Prado, Soizic, Pintado Valverde, José, Saha, Mahasweta, Selosse, Marc-André, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Subjects
Emerging methodologies ,13. Climate action ,Evolution ,Holobiont concept ,Host-microbe interactions ,Position paper ,14. Life underwater ,Marine ecosystems - Abstract
Host-microbe interactions play crucial roles in marine ecosystems. However, we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help to describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a stable relationship, form a holobiont, and have to be studied together as a coherent biological and functional unit to understand its biology, ecology, and evolution. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences. Given the connectivity and the unexplored biodiversity specific to marine ecosystems, a deeper understanding of such complex systems requires further technological and conceptual advances, e.g. the development of controlled experimental model systems for holobionts from all major lineages and the modeling of (info)chemical-mediated interactions between organisms. Here we propose that one significant challenge is to bridge cross-disciplinary research on tractable model systems in order to address key ecological and evolutionary questions. This first step is crucial to decipher the main drivers of the dynamics and evolution of holobionts and to account for the holobiont concept in applied areas, such as the conservation, management, and exploitation of marine ecosystems and resources.
14. A community perspective on the concept of marine holobionts: Current status, challenges, and future directions
- Author
-
Dittami, Simon M., Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin H., Eveillard, Damien, Gachon, Claire M.M., Griffiths, Sara M., Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H., Medina, Mónica, Marzinelli, Ezequiel M., Morganti, Teresa M., Pons, Laura N., Pintado, José, Saha, Mahasweta, Selosse, Marc-André, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Subjects
13. Climate action ,Evolution ,Host-microbiota interactions ,Ecosystem services ,Dysbiosis ,Marine holobionts ,14. Life underwater ,Symbiosis - Abstract
Host-microbe interactions play crucial roles in marine ecosystems. However, we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help to describe and understand these complex systems. It posits that a host and its associated microbiota with which it interacts, form a holobiont, and have to be studied together as a coherent biological and functional unit to understand its biology, ecology, and evolution. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences. Given the connectivity and the unexplored biodiversity specific to marine ecosystems, a deeper understanding of such complex systems requires further technological and conceptual advances, e.g., the development of controlled experimental model systems for holobionts from all major lineages and the modeling of (info)chemical-mediated interactions between organisms. Here we propose that one significant challenge is to bridge cross-disciplinary research on tractable model systems in order to address key ecological and evolutionary questions. This first step is crucial to decipher the main drivers of the dynamics and evolution of holobionts and to account for the holobiont concept in applied areas, such as the conservation, management, and exploitation of marine ecosystems and resources, where practical solutions to predict and mitigate the impact of human activities are more important than ever., PeerJ, 9, ISSN:2167-8359
15. A community perspective on the concept of marine holobionts: current status, challenges, and future directions
- Author
-
Dittami, Simon M., Arboleda, Enrique, Auguet, Jean-Christophe, Bigalke, Arite, Briand, Enora, Cárdenas, Paco, Cardini, Ulisse, Decelle, Johan, Engelen, Aschwin, Eveillard, Damien, Gachon, Claire M.M., Griffiths, Sarah, Harder, Tilmann, Kayal, Ehsan, Kazamia, Elena, Lallier, François H., Medina, Mónica, Marzinelli, Ezequiel M., Morganti, Teresa, Núñez Pons, Laura, Prado, Soizic, Pintado Valverde, José, Saha, Mahasweta, Selosse, Marc-André, Skillings, Derek, Stock, Willem, Sunagawa, Shinichi, Toulza, Eve, Vorobev, Alexey, Leblanc, Catherine, and Not, Fabrice
- Subjects
Emerging methodologies ,13. Climate action ,Evolution ,Holobiont concept ,Host-microbe interactions ,Position paper ,14. Life underwater ,Marine ecosystems - Abstract
Host-microbe interactions play crucial roles in marine ecosystems. However, we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help to describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a stable relationship, form a holobiont, and have to be studied together as a coherent biological and functional unit to understand its biology, ecology, and evolution. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences. Given the connectivity and the unexplored biodiversity specific to marine ecosystems, a deeper understanding of such complex systems requires further technological and conceptual advances, e.g. the development of controlled experimental model systems for holobionts from all major lineages and the modeling of (info)chemical-mediated interactions between organisms. Here we propose that one significant challenge is to bridge cross-disciplinary research on tractable model systems in order to address key ecological and evolutionary questions. This first step is crucial to decipher the main drivers of the dynamics and evolution of holobionts and to account for the holobiont concept in applied areas, such as the conservation, management, and exploitation of marine ecosystems and resources.
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