26 results on '"Beyl S"'
Search Results
2. Correlation between human ether‐a‐go‐go‐related gene channel inhibition and action potential prolongation
- Author
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Saxena, P, Hortigon‐Vinagre, M P, Beyl, S, Baburin, I, Andranovits, S, Iqbal, S M, Costa, A, IJzerman, A P, Kügler, P, Timin, E, Smith, G L, and Hering, S
- Published
- 2017
- Full Text
- View/download PDF
3. Valence-bond solid to antiferromagnet transition in the two-dimensional Su-Schrieffer-Heeger model by Langevin dynamics
- Author
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Götz, A., primary, Beyl, S., additional, Hohenadler, M., additional, and Assaad, F. F., additional
- Published
- 2022
- Full Text
- View/download PDF
4. Methods for quantification of pore–voltage sensor interaction in CaV1.2
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Beyl, S., Kügler, P., Hohaus, A., Depil, K., Hering, S., and Timin, E.
- Published
- 2014
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5. Automated fast perfusion of Xenopus oocytes for drug screening
- Author
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Baburin, I., Beyl, S., and Hering, S.
- Published
- 2006
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6. Interaction of diltiazem with an intracellularly accessible binding site on CaV1.2
- Author
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Shabbir, W, Beyl, S, Timin, EN, Schellmann, D, Erker, T, Hohaus, A, Hockerman, GH, and Hering, S
- Published
- 2011
- Full Text
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7. Methods for quantification of pore–voltage sensor interaction in CaV1.2
- Author
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Beyl, S., Kügler, P., Hohaus, A., Depil, K., Hering, S., and Timin, E.
- Subjects
Patch-Clamp Techniques ,Physiology ,Clinical Biochemistry ,Kinetic model ,Kidney ,Electrophysiology ,Calcium Channels, N-Type ,Calcium channel ,Voltage sensor ,Physiology (medical) ,Channel pore ,Mutation ,Humans ,Gating mechanism ,Ion Channel Gating ,Ion Channels, Receptors and Transporters ,Cells, Cultured - Abstract
Voltage sensors (VSs) initiate the pore opening and closure in voltage-gated ion channels. Here, we propose a technique for estimation of the equilibrium constant of the up- and downward VS movements and rate constants of pore transitions from macroscopic current kinetics. Bell-shaped voltage dependence of the activation/deactivation time constants and Bolzmann distributions of CaV1.2 activation were analyzed in terms of a circular four-state (rest, activated, open, deactivated) channel model: both dependencies uniquely constrain the model parameters. Neutralization of gating charges in IS4 or IIS4 only slightly affects the equilibrium constant of VS transition while affecting simultaneously the rate constants of pore opening and closure. The application of our technique revealed that pore mutations on IS6–IVS6 segments induce pronounced shifts of the VS equilibrium between the resting (down) and activated (up) position. Analyzing a channelopathy mutation highlighted that the leftward shift of the activation curve induced by I781T on IIS6 is only partially (35 %) caused by a destabilization of the channel pore but predominantly (65 %) by a shifted VS equilibrium towards activation. The algorithm proposed for CaV1.2 may be applicable for calculating rate constants from macroscopic current kinetics in other voltage-gated ion channels. Electronic supplementary material The online version of this article (doi:10.1007/s00424-013-1319-8) contains supplementary material, which is available to authorized users.
- Published
- 2013
8. Quantum Monte Carlo Simulations of Strongly Correlated Electron Systems: The Dimensional Crossover
- Author
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Raczkowski, M., Bercx, M., Weber, M., Beyl, S., Hofmann, J., Parisen Toldin, F., Hohenadler, M., and Assaad, F. F.
- Abstract
The research carried out in this project aims to exactly solve models of correlated electron systems with large-scale fermion quantum Monte Carlo simulations. The goal is to understand the emergent many-body phenomena and critical behaviour. We will first provide an overview of themes and then concentrate on the so-called dimensional crossover phenomena. In this domain, we were able to provide dynamical information about the confinement of fractionalised spinon excitations in weakly coupled Hubbard chains. Such calculations are relevant for the understanding of neutron scattering experiments on KCuF3. From the technical point of view we are using and developing a number of algorithms, including continuous-time interaction expansion and determinantal quantum Monte Carlo methods.
- Published
- 2016
9. Screening plant extracts for activity on ligand- and voltage-gated ion channels expressed in Xenopus oocytes.
- Author
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Baburin, I., Beyl, S., Khom, S., Stork, D., Polder, H. R., and Hering, S.
- Subjects
- *
PLANT extracts , *ION channels , *XENOPUS , *OVUM , *VALERIANA officinalis - Abstract
Introduction: A perfusion system for automated screening of plant extracts on ion channels was expressed in Xenopus oocytes. Methodology: Voltage-clamp experiments were performed in a small (15µl) bath that was covered by a glass plate. Two inlet channels in the glass cover enable access of two microelectrodes to the oocyte. A funnel for drug application surrounds these access channels. Compared to a previous version we modified the chamber construction by placing the oocyte onto a cylindrical pedestal, surrounded by an annular perfusion gap. The perfusion gap was connected to the chamber outflow. Drugs or neurotransmitters were applied to the funnel by means of a pipetting robot ("ScreeningTool", npi electronic, Tamm, Germany) under computer control. Results: A mean time of solution exchange (t10-90%) of about 50 ms was estimated. The system required only small amounts of test solution (about 100 µl) for drug screening. After an initial fast perfusion step the chamber was continuously perfused at a slower rate (usually at 1 - 8 µl/second). The ScreeningTool robot system has been successfully applied for screening of HERG channel blockers, modulators of GABAA channels or nicotinic acetylcholine receptors (nAChR). Conclusion: The system was found to be highly suitable for screening plant extracts for sedative, anxiolytic, anticonvulsant and muscle relaxant effects. Active compounds were identified in extracts from Valeriana officinalis. Examples will be given to illustrate the new screening technology. [ABSTRACT FROM AUTHOR]
- Published
- 2007
10. Assay for evaluation of proarrhythmic effects of herbal products: Case study with 12 Evodia preparations.
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Baltov B, Beyl S, Baburin I, Reinhardt J, Szkokan P, Garifulina A, Timin E, Kraushaar U, Potterat O, Hamburger M, Kügler P, and Hering S
- Abstract
Guidelines for preclinical drug development reduce the occurrence of arrhythmia-related side effects. Besides ample evidence for the presence of arrhythmogenic substances in plants, there is no consensus on a research strategy for the evaluation of proarrhythmic effects of herbal products. Here, we propose a cardiac safety assay for the detection of proarrhythmic effects of plant extracts based on the experimental approaches described in the Comprehensive In vitro Proarrhythmia Assay (CiPA). Microelectrode array studies (MEAs) and voltage sensing optical technique on human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) were combined with ionic current measurements in mammalian cell lines , In-silico simulations of cardiac action potentials (APs) and statistic regression analysis. Proarrhythmic effects of 12 Evodia preparations, containing different amounts of the hERG inhibitors dehydroevodiamine (DHE) and hortiamine were analysed. Extracts produced different prolongation of the AP, occurrence of early after depolarisations and triangulation of the AP in hiPSC-CMs depending on the contents of the hERG inhibitors. DHE and hortiamine dose-dependently prolonged the field potential duration in hiPSC-CMs studied with MEAs. In-silico simulations of ventricular AP support a scenario where proarrhythmic effects of Evodia extracts are predominantly caused by the content of the selective hERG inhibitors. Statistic regression analysis revealed a high torsadogenic risk for both compounds that was comparable to drugs assigned to the high-risk category in a CiPA study., Competing Interests: The authors have no competing interests to declare., (© 2023 Published by Elsevier B.V.)
- Published
- 2023
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11. Generation of myogenic progenitor cell-derived smooth muscle cells for sphincter regeneration.
- Author
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Thurner M, Deutsch M, Janke K, Messner F, Kreutzer C, Beyl S, Couillard-Després S, Hering S, Troppmair J, and Marksteiner R
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- Animals, Cell Differentiation, Cells, Cultured, Mice, Muscle, Skeletal, Myoblasts, Myocytes, Smooth Muscle, Muscle Development, Stem Cells
- Abstract
Background: Degeneration of smooth muscles in sphincters can cause debilitating diseases such as fecal incontinence. Skeletal muscle-derived cells have been effectively used in clinics for the regeneration of the skeletal muscle sphincters, such as the external anal or urinary sphincter. However, little is known about the in vitro smooth muscle differentiation potential and in vivo regenerative potential of skeletal muscle-derived cells., Methods: Myogenic progenitor cells (MPC) were isolated from the skeletal muscle and analyzed by flow cytometry and in vitro differentiation assays. The differentiation of MPC to smooth muscle cells (MPC-SMC) was evaluated by immunofluorescence, flow cytometry, patch-clamp, collagen contraction, and microarray gene expression analysis. In vivo engraftment of MPC-SMC was monitored by transplanting reporter protein-expressing cells into the pyloric sphincter of immunodeficient mice., Results: MPC derived from human skeletal muscle expressed mesenchymal surface markers and exhibit skeletal myogenic differentiation potential in vitro. In contrast, they lack hematopoietic surface marker, as well as adipogenic, osteogenic, and chondrogenic differentiation potential in vitro. Cultivation of MPC in smooth muscle differentiation medium significantly increases the fraction of alpha smooth muscle actin (aSMA) and smoothelin-positive cells, while leaving the number of desmin-positive cells unchanged. Smooth muscle-differentiated MPC (MPC-SMC) exhibit increased expression of smooth muscle-related genes, significantly enhanced numbers of CD146- and CD49a-positive cells, and in vitro contractility and express functional Ca
v and Kv channels. MPC to MPC-SMC differentiation was also accompanied by a reduction in their skeletal muscle differentiation potential. Upon removal of the smooth muscle differentiation medium, a major fraction of MPC-SMC remained positive for aSMA, suggesting the definitive acquisition of their phenotype. Transplantation of murine MPC-SMC into the mouse pyloric sphincter revealed engraftment of MPC-SMC based on aSMA protein expression within the host smooth muscle tissue., Conclusions: Our work confirms the ability of MPC to give rise to smooth muscle cells (MPC-SMC) with a well-defined and stable phenotype. Moreover, the engraftment of in vitro-differentiated murine MPC-SMC into the pyloric sphincter in vivo underscores the potential of this cell population as a novel cell therapeutic treatment for smooth muscle regeneration of sphincters.- Published
- 2020
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12. Structure-Activity Relationships of Novel Thiazole-Based Modafinil Analogues Acting at Monoamine Transporters.
- Author
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Kalaba P, Ilić M, Aher NY, Dragačević V, Wieder M, Zehl M, Wackerlig J, Beyl S, Sartori SB, Ebner K, Roller A, Lukic N, Beryozkina T, Gonzalez ERP, Neill P, Khan JA, Bakulev V, Leban JJ, Hering S, Pifl C, Singewald N, Lubec J, Urban E, Sitte HH, Langer T, and Lubec G
- Subjects
- Animals, Dopamine Plasma Membrane Transport Proteins metabolism, Dopamine Uptake Inhibitors chemical synthesis, Dopamine Uptake Inhibitors metabolism, Dopamine Uptake Inhibitors pharmacokinetics, HEK293 Cells, Humans, Male, Modafinil metabolism, Modafinil pharmacokinetics, Molecular Docking Simulation, Molecular Structure, Norepinephrine Plasma Membrane Transport Proteins antagonists & inhibitors, Protein Binding, Rats, Sprague-Dawley, Serotonin Plasma Membrane Transport Proteins metabolism, Serotonin and Noradrenaline Reuptake Inhibitors chemical synthesis, Serotonin and Noradrenaline Reuptake Inhibitors metabolism, Serotonin and Noradrenaline Reuptake Inhibitors pharmacokinetics, Stereoisomerism, Structure-Activity Relationship, Thiazoles chemical synthesis, Thiazoles metabolism, Thiazoles pharmacokinetics, Dopamine Plasma Membrane Transport Proteins antagonists & inhibitors, Dopamine Uptake Inhibitors pharmacology, Modafinil analogs & derivatives, Modafinil pharmacology, Serotonin and Noradrenaline Reuptake Inhibitors pharmacology, Thiazoles pharmacology
- Abstract
Atypical dopamine reuptake inhibitors, such as modafinil, are used for the treatment of sleeping disorders and investigated as potential therapeutics against cocaine addiction and for cognitive enhancement. Our continuous effort to find modafinil analogues with higher inhibitory activity on and selectivity toward the dopamine transporter (DAT) has previously led to the promising thiazole-containing derivatives CE-103, CE-111, CE-123, and CE-125. Here, we describe the synthesis and activity of a series of compounds based on these scaffolds, which resulted in several new selective DAT inhibitors and gave valuable insights into the structure-activity relationships. Introduction of the second chiral center and subsequent chiral separations provided all four stereoisomers, whereby the S -configuration on both generally exerted the highest activity and selectivity on DAT. The representative compound of this series was further characterized by in silico , in vitro , and in vivo studies that have demonstrated both safety and efficacy profile of this compound class.
- Published
- 2020
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13. LUF7244, an allosteric modulator/activator of K v 11.1 channels, counteracts dofetilide-induced torsades de pointes arrhythmia in the chronic atrioventricular block dog model.
- Author
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Qile M, Beekman HDM, Sprenkeler DJ, Houtman MJC, van Ham WB, Stary-Weinzinger A, Beyl S, Hering S, van den Berg DJ, de Lange ECM, Heitman LH, IJzerman AP, Vos MA, and van der Heyden MAG
- Subjects
- Allosteric Regulation drug effects, Animals, Anti-Arrhythmia Agents administration & dosage, Anti-Arrhythmia Agents chemistry, Atrioventricular Block metabolism, Atrioventricular Block pathology, Cells, Cultured, Dogs, HEK293 Cells, Humans, Models, Molecular, Myocytes, Cardiac drug effects, Myocytes, Cardiac metabolism, Myocytes, Cardiac pathology, Phenethylamines, Pyridines administration & dosage, Pyridines chemistry, Sulfonamides, Torsades de Pointes chemically induced, Torsades de Pointes pathology, Anti-Arrhythmia Agents pharmacology, Atrioventricular Block drug therapy, Disease Models, Animal, ERG1 Potassium Channel metabolism, Pyridines pharmacology, Torsades de Pointes drug therapy
- Abstract
Background and Purpose: K
v 11.1 (hERG) channel blockade is an adverse effect of many drugs and lead compounds, associated with lethal cardiac arrhythmias. LUF7244 is a negative allosteric modulator/activator of Kv 11.1 channels that inhibits early afterdepolarizations in vitro. We tested LUF7244 for antiarrhythmic efficacy and potential proarrhythmia in a dog model., Experimental Approach: LUF7244 was tested in vitro for (a) increasing human IKv11.1 and canine IKr and (b) decreasing dofetilide-induced action potential lengthening and early afterdepolarizations in cardiomyocytes derived from human induced pluripotent stem cells and canine isolated ventricular cardiomyocytes. In vivo, LUF7244 was given intravenously to anaesthetized dogs in sinus rhythm or with chronic atrioventricular block., Key Results: LUF7244 (0.5-10 μM) concentration dependently increased IKv11.1 by inhibiting inactivation. In vitro, LUF7244 (10 μM) had no effects on IKIR2.1 , INav1.5 , ICa-L , and IKs , doubled IKr , shortened human and canine action potential duration by approximately 50%, and inhibited dofetilide-induced early afterdepolarizations. LUF7244 (2.5 mg·kg-1 ·15 min-1 ) in dogs with sinus rhythm was not proarrhythmic and shortened, non-significantly, repolarization parameters (QTc: -6.8%). In dogs with chronic atrioventricular block, LUF7244 prevented dofetilide-induced torsades de pointes arrhythmias in 5/7 animals without normalization of the QTc. Peak LUF7244 plasma levels were 1.75 ± 0.80 during sinus rhythm and 2.34 ± 1.57 μM after chronic atrioventricular block., Conclusions and Implications: LUF7244 counteracted dofetilide-induced early afterdepolarizations in vitro and torsades de pointes in vivo. Allosteric modulators/activators of Kv 11.1 channels might neutralize adverse cardiac effects of existing drugs and newly developed compounds that display QTc lengthening., (© 2019 The Authors. British Journal of Pharmacology published by John Wiley & Sons Ltd on behalf of British Pharmacological Society.)- Published
- 2019
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14. Dehydroevodiamine and hortiamine, alkaloids from the traditional Chinese herbal drug Evodia rutaecarpa, are I Kr blockers with proarrhythmic effects in vitro and in vivo.
- Author
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Baburin I, Varkevisser R, Schramm A, Saxena P, Beyl S, Szkokan P, Linder T, Stary-Weinzinger A, van der Heyden MAG, Houtman M, Takanari H, Jonsson M, Beekman JHD, Hamburger M, Vos MA, and Hering S
- Subjects
- Alkaloids chemistry, Alkaloids pharmacology, Animals, Arrhythmias, Cardiac metabolism, Dogs, Drugs, Chinese Herbal chemistry, Drugs, Chinese Herbal pharmacology, Ether-A-Go-Go Potassium Channels metabolism, Female, HEK293 Cells, Humans, Myocytes, Cardiac drug effects, Myocytes, Cardiac metabolism, Rabbits, Torsades de Pointes chemically induced, Torsades de Pointes metabolism, Xenopus, Action Potentials drug effects, Alkaloids adverse effects, Arrhythmias, Cardiac chemically induced, Drugs, Chinese Herbal adverse effects, Ether-A-Go-Go Potassium Channels antagonists & inhibitors, Evodia chemistry
- Abstract
Evodiae fructus is a widely used herbal drug in traditional Chinese medicine. Evodia extract was found to inhibit hERG channels. The aim of the current study was to identify hERG inhibitors in Evodia extract and to investigate their potential proarrhythmic effects. Dehydroevodiamine (DHE) and hortiamine were identified as I
Kr (rapid delayed rectifier current) inhibitors in Evodia extract by HPLC-microfractionation and subsequent patch clamp studies on human embryonic kidney cells. DHE and hortiamine inhibited IKr with IC50 s of 253.2±26.3nM and 144.8±35.1nM, respectively. In dog ventricular cardiomyocytes, DHE dose-dependently prolonged the action potential duration (APD). Early afterdepolarizations (EADs) were seen in 14, 67, 100, and 67% of cells after 0.01, 0.1, 1 and 10μM DHE, respectively. The proarrhythmic potential of DHE was evaluated in 8 anesthetized rabbits and in 8 chronic atrioventricular block (cAVB) dogs. In rabbits, DHE increased the QT interval significantly by 12±10% (0.05mg/kg/5min) and 60±26% (0.5mg/kg/5min), and induced Torsade de Pointes arrhythmias (TdP, 0.5mg/kg/5min) in 2 rabbits. In cAVB dogs, 0.33mg/kg/5min DHE increased QT duration by 48±10% (P<0.05*) and induced TdP in 2/4 dogs. A higher dose did not induce TdP. In human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs), methanolic extracts of Evodia, DHE and hortiamine dose-dependently prolonged APD. At 3μM DHE and hortiamine induced EADs. hERG inhibition at submicromolar concentrations, APD prolongation and EADs in hiPSC-CMs and dose-dependent proarrhythmic effects of DHE at micromolar plasma concentrations in cAVB dogs should increase awareness regarding proarrhythmic effects of widely used Evodia extracts., (Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.)- Published
- 2018
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15. Key role of segment IS4 in Cav1.2 inactivation: link between activation and inactivation.
- Author
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Andranovits S, Beyl S, Hohaus A, Zangerl-Plessl EM, Timin E, and Hering S
- Subjects
- Amino Acid Sequence, Amino Acids metabolism, Cell Line, HEK293 Cells, Humans, Ion Channel Gating physiology, Kinetics, Action Potentials physiology, Calcium Channels, L-Type metabolism
- Abstract
Inactivation of L-type calcium channel (Cav1.2) is an important determinant of the length of the cardiac action potential. Here, we report a key role of the voltage-sensing segment IS4 in Cav1.2 inactivation. Neutralization of IS4 charges gradually shifted the steady-state inactivation curve on the voltages axis from 5.1 ± 3.7 mV in single point mutant IS4(K1Q) to -26.7 ± 1.3 mV in quadruple mutant IS4(K1Q/R2Q/R3Q/R4Q) compared to wild-type (WT) and accelerated inactivation. The slope factor of the Boltzmann curve of inactivation was decreased from 17.4 ± 3.5 mV (IS4(K1Q)) to 6.2 ± 0.7 mV (IS4(K1Q/R2Q/R3Q/R4Q)). Neutralizations of single or multiple charges in IIS4 and IIIS4 did not significantly affect the time course of inactivation. Neutralization of individual IVS4 charges shifted the inactivation curve between 17.4 ± 1.7 mV (IVS4(R2Q)) and -4.6 ± 1.4 mV (IVS4(R4Q)) on the voltage axis and affected the slope of the inactivation curves (IVS4(R2Q): 10.2 ± 1.2 mV, IVS4(R4Q): 9.7 ± 0.7 mV and IVS4(K5Q): 8.1 ± 0.7 mV vs WT: 14.1 ± 0.8 mV). IS4(K1Q) attenuated while IS4(K1Q/R2Q/R3Q) and IS4(K1Q/R2Q/R4Q/R3Q) enhanced the development of inactivation. Shifts in the voltage dependence of inactivation curves induced by IS4 neutralizations significantly correlated with shifts of the voltage dependence of channel activation (r = 0.95, p < 0.01) indicating that IS4 movement is not only rate limiting for activation but also initiates inactivation. The paradoxical decrease of the slope factor of the steady-state inactivation and acceleration of inactivation kinetics upon charge neutralization in segment IS4 may reflect the loss of stabilizing interactions of arginines and lysine with surrounding residues.
- Published
- 2017
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16. Upward movement of IS4 and IIIS4 is a rate-limiting stage in Ca v 1.2 activation.
- Author
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Beyl S, Hohaus A, Andranovits S, Timin E, and Hering S
- Subjects
- Action Potentials, Calcium Channels, L-Type chemistry, Calcium Channels, L-Type genetics, HEK293 Cells, Humans, Mutation, Protein Domains, Calcium Channels, L-Type metabolism, Ion Channel Gating
- Abstract
In order to specify the role of individual S4 segments in Ca
V 1.2 gating, charged residues of segments IS4-IVS4 were replaced by glutamine and the corresponding effects on activation/deactivation of calcium channel currents were analysed. Almost all replacements of charges in IS4 and IIIS4 decreased the slope of the Boltzmann curve of channel activation (activation curve) while charge neutralisations in IIS4 and IVS4 did not significantly affect the slope. S4 mutations caused either left or rightward shifts of the activation curve, and in wild-type channels, these S4 mutations hardly affected current kinetics.In slowly gating pore (S6) mutants (G432W, A780T, G1193T or A1503G), neutralisations in S4 segments significantly accelerated current kinetics. Likewise in wild type, charge replacements in IS4 and IIIS4 of pore mutants reduced the slope of the activation curves while substitutions of charges in IIS4 and IVS4 had less or no impact. We propose a gating model where the structurally different S4 segments leave their resting positions not simultaneously. Upward movement of segments IS4 and (to a lesser extend) IIIS4 appear to be a rate-limiting stage for releasing the pore gates. These segments carry most of the effective charge for channel activation. Our study suggests that S4 segments of CaV 1.2 control the closed state in domain specific manner while stabilizing the open state in a non-specific manner., Competing Interests: The authors declare that they have no conflict of interest.- Published
- 2016
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17. Neutralisation of a single voltage sensor affects gating determinants in all four pore-forming S6 segments of Ca(V)1.2: a cooperative gating model.
- Author
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Beyl S, Depil K, Hohaus A, Stary-Weinzinger A, Linder T, Timin E, and Hering S
- Subjects
- Amino Acid Motifs, Amino Acid Sequence, Animals, Calcium Channels, L-Type genetics, Calcium Channels, L-Type physiology, Humans, Models, Molecular, Models, Neurological, Molecular Sequence Data, Mutation, Protein Structure, Tertiary, Rabbits, Static Electricity, Calcium Channels, L-Type chemistry, Calcium Channels, L-Type metabolism, Ion Channel Gating
- Abstract
Voltage sensors trigger the closed-open transitions in the pore of voltage-gated ion channels. To probe the transmission of voltage sensor signalling to the channel pore of Ca(V)1.2, we investigated how elimination of positive charges in the S4 segments (charged residues were replaced by neutral glutamine) modulates gating perturbations induced by mutations in pore-lining S6 segments. Neutralisation of all positively charged residues in IIS4 produced a functional channel (IIS4(N)), while replacement of the charged residues in IS4, IIIS4 and IVS4 segments resulted in nonfunctional channels. The IIS4(N) channel displayed activation kinetics similar to wild type. Mutations in a highly conserved structure motif on S6 segments ("GAGA ring": G432W in IS6, A780T in IIS6, G1193T in IIIS6 and A1503G in IVS6) induce strong left-shifted activation curves and decelerated channel deactivation kinetics. When IIS4(N) was combined with these mutations, the activation curves were shifted back towards wild type and current kinetics were accelerated. In contrast, 12 other mutations adjacent to the GAGA ring in IS6-IVS6, which also affect activation gating, were not rescued by IIS4(N). Thus, the rescue of gating distortions in segments IS6-IVS6 by IIS4(N) is highly position-specific. Thermodynamic cycle analysis supports the hypothesis that IIS4 is energetically coupled with the distantly located GAGA residues. We speculate that conformational changes caused by neutralisation of IIS4 are not restricted to domain II (IIS6) but are transmitted to gating structures in domains I, III and IV via the GAGA ring.
- Published
- 2012
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18. Timothy mutation disrupts the link between activation and inactivation in Ca(V)1.2 protein.
- Author
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Depil K, Beyl S, Stary-Weinzinger A, Hohaus A, Timin E, and Hering S
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- Amino Acid Motifs, Animals, Autistic Disorder, Calcium Channels, L-Type chemistry, Calcium Channels, L-Type metabolism, Conserved Sequence, Humans, Ion Channel Gating genetics, Long QT Syndrome genetics, Protein Conformation, Rabbits, Sequence Homology, Syndactyly genetics, Calcium Channels, L-Type genetics, Long QT Syndrome physiopathology, Mutation, Missense physiology, Syndactyly physiopathology
- Abstract
The Timothy syndrome mutations G402S and G406R abolish inactivation of Ca(V)1.2 and cause multiorgan dysfunction and lethal arrhythmias. To gain insights into the consequences of the G402S mutation on structure and function of the channel, we systematically mutated the corresponding Gly-432 of the rabbit channel and applied homology modeling. All mutations of Gly-432 (G432A/M/N/V/W) diminished channel inactivation. Homology modeling revealed that Gly-432 forms part of a highly conserved structure motif (G/A/G/A) of small residues in homologous positions of all four domains (Gly-432 (IS6), Ala-780 (IIS6), Gly-1193 (IIIS6), Ala-1503 (IVS6)). Corresponding mutations in domains II, III, and IV induced, in contrast, parallel shifts of activation and inactivation curves indicating a preserved coupling between both processes. Disruption between coupling of activation and inactivation was specific for mutations of Gly-432 in domain I. Mutations of Gly-432 removed inactivation irrespective of the changes in activation. In all four domains residues G/A/G/A are in close contact with larger bulky amino acids from neighboring S6 helices. These interactions apparently provide adhesion points, thereby tightly sealing the activation gate of Ca(V)1.2 in the closed state. Such a structural hypothesis is supported by changes in activation gating induced by mutations of the G/A/G/A residues. The structural implications for Ca(V)1.2 activation and inactivation gating are discussed.
- Published
- 2011
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19. Physicochemical properties of pore residues predict activation gating of Ca V1.2: a correlation mutation analysis.
- Author
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Beyl S, Depil K, Hohaus A, Stary-Weinzinger A, Timin E, Shabbir W, Kudrnac M, and Hering S
- Subjects
- Amino Acid Sequence, Amino Acid Substitution, Calcium Channels, L-Type genetics, Cells, Cultured, DNA Mutational Analysis, Humans, Hydrophobic and Hydrophilic Interactions, Ion Channel Gating genetics, Thermodynamics, Calcium Channels, L-Type physiology, Ion Channel Gating physiology
- Abstract
Single point mutations in pore-forming S6 segments of calcium channels may transform a high-voltage-activated into a low-voltage-activated channel, and resulting disturbances in calcium entry may cause channelopathies (Hemara-Wahanui et al., Proc Natl Acad Sci U S A 102(21):7553-7558, 16). Here we ask the question how physicochemical properties of amino acid residues in gating-sensitive positions on S6 segments determine the threshold of channel activation of Ca(V)1.2. Leucine in segment IS6 (L434) and a newly identified activation determinant in segment IIIS6 (G1193) were mutated to a variety of amino acids. The induced leftward shifts of the activation curves and decelerated current activation and deactivation suggest a destabilization of the closed and a stabilisation of the open channel state by most mutations. A selection of 17 physicochemical parameters (descriptors) was calculated for these residues and examined for correlation with the shifts of the midpoints of the activation curve (ΔV (act)). ΔV (act) correlated with local side-chain flexibility in position L434 (IS6), with the polar accessible surface area of the side chain in position G1193 (IIIS6) and with hydrophobicity in position I781 (IIS6). Combined descriptor analysis for positions I781 and G1193 revealed that additional amino acid properties may contribute to conformational changes during the gating process. The identified physicochemical properties in the analysed gating-sensitive positions (accessible surface area, side-chain flexibility, and hydrophobicity) predict the shifts of the activation curves of Ca(V)1.2.
- Published
- 2011
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20. Cysteines in the loop between IS5 and the pore helix of Ca(V)3.1 are essential for channel gating.
- Author
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Karmazinova M, Beyl S, Stary-Weinzinger A, Suwattanasophon C, Klugbauer N, Hering S, and Lacinova L
- Subjects
- Amino Acid Sequence, Amino Acid Substitution, Animals, Calcium Channels, T-Type chemistry, Calcium Channels, T-Type genetics, Cysteine chemistry, Dithionitrobenzoic Acid pharmacology, Dithiothreitol pharmacology, HEK293 Cells, Humans, Ion Channel Gating drug effects, Mice, Models, Molecular, Molecular Sequence Data, Patch-Clamp Techniques, Protein Structure, Tertiary, Calcium Channels, T-Type physiology, Cysteine genetics, Ion Channel Gating physiology
- Abstract
The role of six cysteines of Ca(V)3.1 in channel gating was investigated. C241, C271, C282, C298, C313, and C323, located in the extracellular loop between segment IS5 and the pore helix, were each mutated to alanine; the resultant channels were expressed and studied by patch clamping in HEK293 cells. C298A and C313A conducted calcium currents, while the other mutants were not functional. C298A and C313A as well as double mutation C298/313A significantly reduced the amplitude of the calcium currents, shifted the activation curve in the depolarizing direction and slowed down channel inactivation. Redox agents dithiothreitol (DTT) and 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) shifted the current activation curve of wild-type channels in the hyperpolarizing direction. Activation curve for all mutated channels was shifted in hyperpolarizing direction by DTT while DTNB caused a depolarizing shift. Our study reveals that the cysteines we studied have an essential role in Ca(V)3.1 gating. We hypothesize that cysteines in the large extracellular loop of Ca(V)3.1 form bridges within the loop and/or neighboring channel segments that are essential for channel gating.
- Published
- 2010
- Full Text
- View/download PDF
21. Different pathways for activation and deactivation in CaV1.2: a minimal gating model.
- Author
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Beyl S, Kügler P, Kudrnac M, Hohaus A, Hering S, and Timin E
- Subjects
- Calcium Channels, L-Type chemistry, Calcium Channels, L-Type genetics, Cell Line, Glycine genetics, Humans, Mutation, Patch-Clamp Techniques, Protein Conformation, Calcium Channels, L-Type metabolism, Ion Channel Gating, Models, Chemical
- Abstract
Point mutations in pore-lining S6 segments of CaV1.2 shift the voltage dependence of activation into the hyperpolarizing direction and significantly decelerate current activation and deactivation. Here, we analyze theses changes in channel gating in terms of a circular four-state model accounting for an activation R-A-O and a deactivation O-D-R pathway. Transitions between resting-closed (R) and activated-closed (A) states (rate constants x(V) and y(V)) and open (O) and deactivated-open (D) states (u(V) and w(V)) describe voltage-dependent sensor movements. Voltage-independent pore openings and closures during activation (A-O) and deactivation (D-R) are described by rate constants alpha and beta, and gamma and delta, respectively. Rate constants were determined for 16-channel constructs assuming that pore mutations in IIS6 do not affect the activating transition of the voltage-sensing machinery (x(V) and y(V)). Estimated model parameters of 15 CaV1.2 constructs well describe the activation and deactivation processes. Voltage dependence of the "pore-releasing" sensor movement ((x(V)) was much weaker than the voltage dependence of "pore-locking" sensor movement (y(V)). Our data suggest that changes in membrane voltage are more efficient in closing than in opening CaV1.2. The model failed to reproduce current kinetics of mutation A780P that was, however, accurately fitted with individually adjusted x(V) and y(V). We speculate that structural changes induced by a proline substitution in this position may disturb the voltage-sensing domain.
- Published
- 2009
- Full Text
- View/download PDF
22. Coupled and independent contributions of residues in IS6 and IIS6 to activation gating of CaV1.2.
- Author
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Kudrnac M, Beyl S, Hohaus A, Stary A, Peterbauer T, Timin E, and Hering S
- Subjects
- Amino Acid Substitution, Animals, Calcium Channels, L-Type genetics, Humans, Kinetics, Mutation, Missense, Rabbits, Calcium Channels, L-Type metabolism, Ion Channel Gating physiology
- Abstract
Voltage dependence and kinetics of Ca(V)1.2 activation are affected by structural changes in pore-lining S6 segments of the alpha(1)-subunit. Significant effects are induced by either proline or threonine substitutions in the lower third of segment IIS6 ("bundle crossing region"), where S6 segments are likely to seal the channel in the closed conformation (Hohaus, A., Beyl, S., Kudrnac, M., Berjukow, S., Timin, E. N., Marksteiner, R., Maw, M. A., and Hering, S. (2005) J. Biol. Chem. 280, 38471-38477). Here we report that S435P in IS6 results in a large shift of the activation curve (-25.9 +/- 1.2 mV) and slower current kinetics. Threonine substitutions at positions Leu-429 and Leu-434 induced a similar kinetic phenotype with shifted activation curves (L429T by -6.6 +/- 1.2 and L434T by -12.1 +/- 1.7 mV). Inactivation curves of all mutants were shifted to comparable extents as the activation curves. Interdependence of IS6 and IIS6 mutations was analyzed by means of mutant cycle analysis. Double mutations in segments IS6 and IIS6 induce either additive (L429T/I781T, -34.1 +/- 1.4 mV; L434T/I781T, -40.4 +/- 1.3 mV; L429T/L779T, -12.6 +/- 1.3 mV; and L434T/L779T, -22.4 +/- 1.3 mV) or nonadditive shifts of the activation curves along the voltage axis (S435P/I781T, -33.8 +/- 1.4 mV). Mutant cycle analysis revealed energetic coupling between residues Ser-435 and Ile-781, whereas other paired mutations in segments IS6 and IIS6 had independent effects on activation gating.
- Published
- 2009
- Full Text
- View/download PDF
23. Molecular dynamics and mutational analysis of a channelopathy mutation in the IIS6 helix of Ca V 1.2.
- Author
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Stary A, Kudrnac M, Beyl S, Hohaus A, Timin EN, Wolschann P, Guy HR, and Hering S
- Subjects
- Calcium Channels, L-Type metabolism, Cell Line, Computational Biology methods, Computer Simulation, Humans, Ions, Membrane Potentials, Microscopy, Confocal methods, Models, Biological, Models, Molecular, Models, Statistical, Molecular Conformation, Mutation, Protein Structure, Secondary, Time Factors, Calcium Channels, L-Type chemistry
- Abstract
A channelopathy mutation in segment IIS6 of Ca(V)1.4 (I745T) has been shown to cause severe visual impairment by shifting the activation and inactivation curves to more hyperpolarized voltages and slowing activation and inactivation kinetics. A similar gating phenotype is caused by the corresponding mutation, I781T, in Ca(V)1.2 (midpoint of activation curve (V(0.5)) shifted to -37.7 +/- 1.2 mV). We show here that wild-type gating can partially be restored by a helix stabilizing rescue mutation N785A. V(0.5) of I781T/N785A (V(0.5) = -21.5 +/- 0.6 mV) was shifted back towards wild-type (V(0.5) = -9.9 +/- 1.1 mV). Homology models developed in our group (see accompanying article for details) were used to perform Molecular Dynamics-simulations (MD-simulations) on wild-type and mutant channels. Systematic changes in segment IIIS6 (M1187-F1194) and in helix IIS6 (N785-L786) were studied. The simulated structural changes in S6 segments of I781T/N785A were less pronounced than in I781T. A delicate balance between helix flexibility and stability enabling the formation of hydrophobic seals at the inner channel mouth appears to be important for wild-type Ca(V)1.2 gating. Our study illustrates that effects of mutations in the lower part of IIS6 may not be localized to the residue or even segment being mutated, but may affect conformations of interacting segments.
- Published
- 2008
- Full Text
- View/download PDF
24. Pore stability and gating in voltage-activated calcium channels.
- Author
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Hering S, Beyl S, Stary A, Kudrnac M, Hohaus A, Guy HR, and Timin E
- Subjects
- Animals, Humans, Hydrophobic and Hydrophilic Interactions, Ion Channel Gating, Membrane Potentials, Calcium Channels chemistry, Calcium Channels physiology, Protein Stability
- Abstract
Calcium channel family members activate at different membrane potentials, which enables tissue specific calcium entry. Pore mutations affecting this voltage dependence are associated with channelopathies. In this review we analyze the link between voltage sensitivity and corresponding kinetic phenotypes of calcium channel activation. Systematic changes in hydrophobicity in the lower third of S6 segments gradually shift the activation curve thereby determining the voltage sensitivity. Homology modeling suggests that hydrophobic residues that are located in all four S6 segments close to the inner channel mouth might form adhesion points stabilizing the closed gate. Simulation studies support a scenario where voltage sensors and the pore are essentially independent structural units. We speculate that evolution designed the voltage sensing machinery as robust "all-or-non" device while the varietys of voltage sensitivities of different channel types was accomplished by shaping pore stability.
- Published
- 2008
- Full Text
- View/download PDF
25. Probing the architecture of an L-type calcium channel with a charged phenylalkylamine: evidence for a widely open pore and drug trapping.
- Author
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Beyl S, Timin EN, Hohaus A, Stary A, Kudrnac M, Guy RH, and Hering S
- Subjects
- Binding Sites, Calcium Channel Blockers chemistry, Calcium Channel Blockers metabolism, Calcium Channel Blockers pharmacology, Calcium Channels, L-Type physiology, Cell Line, Humans, Protein Binding, Protein Conformation, Static Electricity, Verapamil chemistry, Verapamil metabolism, Verapamil pharmacology, Calcium Channels, L-Type chemistry, Calcium Channels, L-Type metabolism, Ion Channel Gating drug effects, Ion Channel Gating physiology, Verapamil analogs & derivatives
- Abstract
Voltage-gated calcium channels are in a closed conformation at rest and open temporarily when the membrane is depolarized. To gain insight into the molecular architecture of Ca(v)1.2, we probed the closed and open conformations with the charged phenylalkylamine (-)devapamil ((-)qD888). To elucidate the access pathway of (-)D888 to its binding pocket from the intracellular side, we used mutations replacing a highly conserved Ile-781 by threonine/proline in the pore-lining segment IIS6 of Ca(v)1.2 (1). The shifted channel gating of these mutants (by 30-40 mV in the hyperpolarizing direction) enabled us to evoke currents with identical kinetics at different potentials and thus investigate the effect of the membrane potentials on the drug access per se. We show here that under these conditions the development of channel block by (-)qD888 is not affected by the transmembrane voltage. Recovery from block at rest was, however, accelerated at more hyperpolarized voltages. These findings support the conclusion that Ca(v)1.2 must be opening widely to enable free access of the charged (-)D888 molecule to its binding site, whereas drug dissociation from the closed channel conformation is restricted by bulky channel gates. The functional data indicating a location of a trapped (-)D888 molecule close to the central pore region are supported by a homology model illustrating that the closed Ca(v)1.2 is able to accommodate a large cation such as (-)D888.
- Published
- 2007
- Full Text
- View/download PDF
26. Structural determinants of L-type channel activation in segment IIS6 revealed by a retinal disorder.
- Author
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Hohaus A, Beyl S, Kudrnac M, Berjukow S, Timin EN, Marksteiner R, Maw MA, and Hering S
- Subjects
- 3-Pyridinecarboxylic acid, 1,4-dihydro-2,6-dimethyl-5-nitro-4-(2-(trifluoromethyl)phenyl)-, Methyl ester pharmacology, Amino Acid Sequence, Arginine chemistry, Barium metabolism, Calcium chemistry, Calcium Channels, L-Type chemistry, Cell Line, Green Fluorescent Proteins metabolism, Humans, Ions, Isoleucine chemistry, Kinetics, Membrane Potentials, Microscopy, Confocal, Molecular Sequence Data, Mutagenesis, Site-Directed, Mutation, Phenotype, Protein Conformation, Protein Structure, Tertiary, Time Factors, Transfection, Calcium Channels, L-Type physiology, Retinal Diseases metabolism
- Abstract
The mechanism of channel opening for voltage-gated calcium channels is poorly understood. The importance of a conserved isoleucine residue in the pore-lining segment IIS6 has recently been highlighted by functional analyses of a mutation (I745T) in the Ca(V)1.4 channel causing severe visual impairment (Hemara-Wahanui, A., Berjukow, S., Hope, C. I., Dearden, P. K., Wu, S. B., Wilson-Wheeler, J., Sharp, D. M., Lundon-Treweek, P., Clover, G. M., Hoda, J. C., Striessnig, J., Marksteiner, R., Hering, S., and Maw, M. A. (2005) Proc. Natl. Acad. Sci. U. S. A. 102, 7553-7558). In the present study we analyzed the influence of amino acids in segment IIS6 on gating of the Ca(V)1.2 channel. Substitution of Ile-781, the Ca(V)1.2 residue corresponding to Ile-745 in Ca(V)1.4, by residues of different hydrophobicity, size and polarity shifted channel activation in the hyperpolarizing direction (I781P > I781T > I781N > I781A > I781L). As I781P caused the most dramatic shift (-37 mV), substitution with this amino acid was used to probe the role of other residues in IIS6 in the process of channel activation. Mutations revealed a high correlation between the midpoint voltages of activation and inactivation. A unique kinetic phenotype was observed for residues 779-782 (LAIA) located in the lower third of segment IIS6; a shift in the voltage dependence of activation was accompanied by a deceleration of activation at hyperpolarized potentials, a deceleration of deactivation at all potentials (I781P and I781T), and decreased inactivation. These findings indicate that Ile-781 substitutions both destabilize the closed conformation and stabilize the open conformation of Ca(V)1.2. Moreover there may be a flexible center of helix bending at positions 779-782 of Ca(V)1.2. These four residues are completely conserved in high voltage-activated calcium channels suggesting that these channels may share a common mechanism of gating.
- Published
- 2005
- Full Text
- View/download PDF
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