398 results on '"Beuning, Penny J."'
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2. DNA damage alters binding conformations of E. coli single-stranded DNA-binding protein
3. ILV methyl NMR resonance assignments of the 81 kDa E. coli β-clamp
4. Versatile separation of nucleotides from bacterial cell lysates using strong anion exchange chromatography
5. NMR resonance assignments for the nucleotide binding domains of the E. coli clamp loader complex γ subunit
6. Engineering Polymerases for New Functions
7. Dynamics of the E. coli β-Clamp Dimer Interface and Its Influence on DNA Loading
8. The response of Escherichia coli to the alkylating agents chloroacetaldehyde and styrene oxide
9. Revisiting the Roles of Catalytic Residues in Human Ornithine Transcarbamylase.
10. DNA Recognition/Processing | DNA Polymerase III, Bacterial
11. DNA repair | UmuDC Lesion Bypass DNA Polymerase V
12. Functional annotation of haloacid dehalogenase superfamily structural genomics proteins
13. Hydrolytic Editing by a Class II Aminoacyl-tRNA Synthetase
14. Specific Atomic Groups and RNA Helix Geometry in Acceptor Stem Recognition by a tRNA Synthetase
15. Local structure based method for prediction of the biochemical function of proteins: Applications to glycoside hydrolases
16. Point mutations in Escherichia coli DNA pol V that confer resistance to non-cognate DNA damage also alter protein–protein interactions
17. Steric gate residues of Y-family DNA polymerases DinB and pol kappa are crucial for dNTP-induced conformational change
18. NMR resonance assignments for the N-terminal domain of the δ subunit of the E. coli γ clamp loader complex
19. Use of FRET to Study Dynamics of DNA Replication
20. Biochemical functional predictions for protein structures of unknown or uncertain function
21. Polymerase Switching in Response to DNA Damage
22. Structure and function of SARS-CoV-2 nucleocapsid protein measured using optical tweezers, confocal fluorescence, and AFM
23. Structural domains of SARS-CoV-2 nucleocapsid protein coordinate to compact long nucleic acid substrates
24. Conformational Analysis of Processivity Clamps in Solution Demonstrates that Tertiary Structure Does Not Correlate with Protein Dynamics
25. Biochemical Activity of 17 Cancer-Associated Variants of DNA Polymerase Kappa Predicted by Electrostatic Properties.
26. Research skills and ethics: the 20-year evolution of a professional development graduate course
27. Discrimination against major groove adducts by Y-family polymerases of the DinB subfamily
28. Dimer exchange and cleavage specificity of the DNA damage response protein UmuD
29. Throwing Away the Cookbook: Implementing Course-Based Undergraduate Research Experiences (CUREs) in Chemistry
30. A Professional Development Handbook for New Faculty
31. Novel Mobile Phase to Control Charge States and Metal Adducts in the LC/MS for mRNA Characterization Assays
32. Discrimination against the Cytosine Analog tC by Escherichia coli DNA Polymerase IV DinB
33. False EX1 signatures caused by sample carryover during HX MS analyses
34. The Dimeric SOS Mutagenesis Protein UmuD Is Active as a Monomer
35. Stereoselective Synthesis of β-Glycinamide Ribonucleotide
36. Conformational Dynamics of the Escherichia coli DNA Polymerase Manager Proteins UmuD and UmuD′
37. Binding and compaction function of structural domains of SARS-CoV-2 nucleocapsid (N) protein on a single stranded nucleic acid substrate
38. Binding and wrapping of E. coli single stranded binding protein (SSB) C-terminal tail variants measured using force spectroscopy
39. Functional Characterization of Structural Genomics Proteins in the Crotonase Superfamily
40. Noncognate DNA damage prevents the formation of the active conformation of the Y-family DNA polymerases DinB and DNA polymerase κ
41. Prediction of distal residue participation in enzyme catalysis
42. Division of Chemical Toxicology Program at the American Chemical Society National Meeting: Celebrating 25 Years!
43. Characterization of novel alleles of the Escherichia coli umuDC genes identifies additional interaction sites of UmuC with the beta clamp
44. Steric gate variants of UmuC confer UV hypersensitivity on Escherichia coli
45. Adapting Undergraduate Research to Remote Work to Increase Engagement
46. Use of FRET to Study Dynamics of DNA Replication
47. Y-family DNA polymerases in Escherichia coli
48. DNA Adductomics by mass tag prelabeling
49. Polymerase manager protein UmuD directly regulates Escherichia coli DNA polymerase III α binding to ssDNA
50. Polymerase Switching in Response to DNA Damage
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